PI0008986.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0008986.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Stress response protein NST1-like
Location	chr06: 14995625 .. 14996083 (-)
Sequence length	459
RNA-Seq Expression	PI0008986.1
Synteny	PI0008986.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTGATAAAAACAGTCCTTAAGAAGAAGGAACAAAAGAAGAAGATGCTTACTGAATTGGGCGAGCAAGTTGAGGAGCTCCCTTCGAAATGCAAGGCATTGGGTGTAGAGAGAGATAACCTCGAAGCCATAGCGGAGGAATTCGAGGACGAGCTAGAGATGATGAGCCCAGTTGATCAAGGACCACCACCTAAGAAACAAAAGGAGGTTGTTGGACCATCCAAAGGAAAGAAGAAAATTGAGGCATTCGGACCTAAGGAGTTCCAAGCAGGCGGCGAAACCAAAACGAAAGCGCCCTCAATTCATACCATAATCAAAATTGAGAAAGGGCTCTTTCCATTTAATGGTACCCTCCCAGACTTCCTCTATGCGCCAATCCAGGCGTTTGGGTGGAAGAAATTTTTAAAGGGCCACCAAATTGAGGATGGGTGTGGTAAAGAAATTCTATGCCGCTAA

mRNA sequence

ATGGAGGTGATAAAAACAGTCCTTAAGAAGAAGGAACAAAAGAAGAAGATGCTTACTGAATTGGGCGAGCAAGTTGAGGAGCTCCCTTCGAAATGCAAGGCATTGGGTGTAGAGAGAGATAACCTCGAAGCCATAGCGGAGGAATTCGAGGACGAGCTAGAGATGATGAGCCCAGTTGATCAAGGACCACCACCTAAGAAACAAAAGGAGGTTGTTGGACCATCCAAAGGAAAGAAGAAAATTGAGGCATTCGGACCTAAGGAGTTCCAAGCAGGCGGCGAAACCAAAACGAAAGCGCCCTCAATTCATACCATAATCAAAATTGAGAAAGGGCTCTTTCCATTTAATGGTACCCTCCCAGACTTCCTCTATGCGCCAATCCAGGCGTTTGGGTGGAAGAAATTTTTAAAGGGCCACCAAATTGAGGATGGGTGTGGTAAAGAAATTCTATGCCGCTAA

Coding sequence (CDS)

ATGGAGGTGATAAAAACAGTCCTTAAGAAGAAGGAACAAAAGAAGAAGATGCTTACTGAATTGGGCGAGCAAGTTGAGGAGCTCCCTTCGAAATGCAAGGCATTGGGTGTAGAGAGAGATAACCTCGAAGCCATAGCGGAGGAATTCGAGGACGAGCTAGAGATGATGAGCCCAGTTGATCAAGGACCACCACCTAAGAAACAAAAGGAGGTTGTTGGACCATCCAAAGGAAAGAAGAAAATTGAGGCATTCGGACCTAAGGAGTTCCAAGCAGGCGGCGAAACCAAAACGAAAGCGCCCTCAATTCATACCATAATCAAAATTGAGAAAGGGCTCTTTCCATTTAATGGTACCCTCCCAGACTTCCTCTATGCGCCAATCCAGGCGTTTGGGTGGAAGAAATTTTTAAAGGGCCACCAAATTGAGGATGGGTGTGGTAAAGAAATTCTATGCCGCTAA

Protein sequence

MEVIKTVLKKKEQKKKMLTELGEQVEELPSKCKALGVERDNLEAIAEEFEDELEMMSPVDQGPPPKKQKEVVGPSKGKKKIEAFGPKEFQAGGETKTKAPSIHTIIKIEKGLFPFNGTLPDFLYAPIQAFGWKKFLKGHQIEDGCGKEILCR

Homology

[Close]

BLAST of PI0008986.1 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 7.0e-09
Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 0


Query: 11  KEQKKKMLTELGEQVEELPSKCK-ALGVERDNLEAIAEEFEDELEMMSPVDQGPPPKKQK 70
           K++K++ L  L EQVE + ++ K A   E D ++ + EEF  E+E MSP+   P P+++ 
Sbjct: 163 KKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKG 222

Query: 71  ----EVVGPSKGKKKIEAFGPKEFQAGGETKTKAPSIHTIIKIEKGLFPFNGTLPDFLYA 130
               E    SK K+K     PK+ Q G   K  A  +  +IKIEKGL PFN  L +FLY 
Sbjct: 223 LTNIEFPKKSKSKRKAGTSRPKDIQRG--NKMSAQKLDKLIKIEKGLLPFNDPLLNFLYG 282

Query: 131 PIQAFGWKKF 136
            I+    +KF
Sbjct: 283 LIKTMKLEKF 290

[Close]

BLAST of PI0008986.1 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 7.0e-09
Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 0


Query: 11  KEQKKKMLTELGEQVEELPSKCK-ALGVERDNLEAIAEEFEDELEMMSPVDQGPPPKKQK 70
           K++K++ L  L EQVE + ++ K A   E D ++ + EEF  E+E MSP+   P P+++ 
Sbjct: 132 KKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKG 191

Query: 71  ----EVVGPSKGKKKIEAFGPKEFQAGGETKTKAPSIHTIIKIEKGLFPFNGTLPDFLYA 130
               E    SK K+K     PK+ Q G   K  A  +  +IKIEKGL PFN  L +FLY 
Sbjct: 192 LTNIEFPKKSKSKRKAGTSRPKDIQRG--NKMSAQKLDKLIKIEKGLLPFNDPLLNFLYG 251

Query: 131 PIQAFGWKKF 136
            I+    +KF
Sbjct: 252 LIKTMKLEKF 259

[Close]

BLAST of PI0008986.1 vs. ExPASy TrEMBL
Match: A0A5D3BEA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00170 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.1e-06
Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 78  KKKIEAFGPKEFQAGGETKTKAPSIHTIIKIEKGLFPFNGTLPDFLYAPIQAFGWKKFLK 137
           K ++E    +E Q GGE + +   I  +IK+EKGLFPFN  LP+F+++ I+AFGW KF  
Sbjct: 24  KSEVEPSKLEEAQRGGEKRPQ--GIDKLIKVEKGLFPFNEALPNFIFSSIKAFGWNKFFT 82

Query: 138 G 139
           G
Sbjct: 84  G 82

[Close]

BLAST of PI0008986.1 vs. ExPASy TrEMBL
Match: A0A5A7UFG4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00220 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.1e-06
Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 0


Query: 75  SKGKK-KIEAFGPKEFQAGGETKTKAPSIHTIIKIEKGLFPFNGTLPDFLYAPIQAFGWK 134
           +K KK ++E    KE Q GGE + +   I  +IK+EKGLFPFN  LP+F+++ I+AFGW 
Sbjct: 20  TKAKKIEVEPSKLKEAQRGGEKRPQ--GIDKLIKVEKGLFPFNEALPNFIFSSIKAFGWT 79

Query: 135 KFLKG 139
           KF  G
Sbjct: 80  KFFTG 82

[Close]

BLAST of PI0008986.1 vs. ExPASy TrEMBL
Match: A0A5A7UQ22 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1312G00140 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.9e-06
Identity = 38/89 (42.70%), Postives = 49/89 (55.06%), Query Frame = 0


Query: 56  MSPVDQGPPPKKQKEVVG------PSKGKKKIEAFGPKEFQAGGETKTKAPSIHTIIKIE 115
           MSP++   P  + KEV+G      P K K K+    P + Q G  +K  A  +  +IKIE
Sbjct: 1   MSPLE---PRLRPKEVLGLVNVQRPKKSKSKVGTSKPNDVQKG--SKKSAEDLDKLIKIE 60

Query: 116 KGLFPFNGTLPDFLYAPIQAFGWKKFLKG 139
           K L PFN  LP+FLY PI+A  WKK   G
Sbjct: 61  KRLLPFNDHLPNFLYGPIKALKWKKDYTG 84

[Close]

BLAST of PI0008986.1 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-08
Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 0


Query: 11  KEQKKKMLTELGEQVEELPSKCK-ALGVERDNLEAIAEEFEDELEMMSPVDQGPPPKKQK 70
           K++K++ L  L EQVE + ++ K A   E D ++ + EEF  E+E MSP+   P P+++ 
Sbjct: 132 KKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKG 191

Query: 71  ----EVVGPSKGKKKIEAFGPKEFQAGGETKTKAPSIHTIIKIEKGLFPFNGTLPDFLYA 130
               E    SK K+K     PK+ Q G   K  A  +  +IKIEKGL PFN  L +FLY 
Sbjct: 192 LTNIEFPKKSKSKRKAGTSRPKDIQRG--NKMSAQKLDKLIKIEKGLLPFNDPLLNFLYG 251

Query: 131 PIQAFGWKKF 136
            I+    +KF
Sbjct: 252 LIKTMKLEKF 259

[Close]

BLAST of PI0008986.1 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-08
Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 0


Query: 11  KEQKKKMLTELGEQVEELPSKCK-ALGVERDNLEAIAEEFEDELEMMSPVDQGPPPKKQK 70
           K++K++ L  L EQVE + ++ K A   E D ++ + EEF  E+E MSP+   P P+++ 
Sbjct: 163 KKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKG 222

Query: 71  ----EVVGPSKGKKKIEAFGPKEFQAGGETKTKAPSIHTIIKIEKGLFPFNGTLPDFLYA 130
               E    SK K+K     PK+ Q G   K  A  +  +IKIEKGL PFN  L +FLY 
Sbjct: 223 LTNIEFPKKSKSKRKAGTSRPKDIQRG--NKMSAQKLDKLIKIEKGLLPFNDPLLNFLYG 282

Query: 131 PIQAFGWKKF 136
            I+    +KF
Sbjct: 283 LIKTMKLEKF 290

[Close]

BLAST of PI0008986.1 vs. NCBI nr
Match: KAA0053237.1 (hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-06
Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 0


Query: 75  SKGKK-KIEAFGPKEFQAGGETKTKAPSIHTIIKIEKGLFPFNGTLPDFLYAPIQAFGWK 134
           +K KK ++E    KE Q GGE + +   I  +IK+EKGLFPFN  LP+F+++ I+AFGW 
Sbjct: 20  TKAKKIEVEPSKLKEAQRGGEKRPQ--GIDKLIKVEKGLFPFNEALPNFIFSSIKAFGWT 79

Query: 135 KFLKG 139
           KF  G
Sbjct: 80  KFFTG 82

[Close]

BLAST of PI0008986.1 vs. NCBI nr
Match: TYJ97633.1 (hypothetical protein E5676_scaffold469G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-06
Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 78  KKKIEAFGPKEFQAGGETKTKAPSIHTIIKIEKGLFPFNGTLPDFLYAPIQAFGWKKFLK 137
           K ++E    +E Q GGE + +   I  +IK+EKGLFPFN  LP+F+++ I+AFGW KF  
Sbjct: 24  KSEVEPSKLEEAQRGGEKRPQ--GIDKLIKVEKGLFPFNEALPNFIFSSIKAFGWNKFFT 82

Query: 138 G 139
           G
Sbjct: 84  G 82

[Close]

BLAST of PI0008986.1 vs. NCBI nr
Match: KAA0056727.1 (hypothetical protein E6C27_scaffold29G00210 [Cucumis melo var. makuwa] >TYK21191.1 hypothetical protein E5676_scaffold1312G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 3.9e-06
Identity = 38/89 (42.70%), Postives = 49/89 (55.06%), Query Frame = 0


Query: 56  MSPVDQGPPPKKQKEVVG------PSKGKKKIEAFGPKEFQAGGETKTKAPSIHTIIKIE 115
           MSP++   P  + KEV+G      P K K K+    P + Q G  +K  A  +  +IKIE
Sbjct: 1   MSPLE---PRLRPKEVLGLVNVQRPKKSKSKVGTSKPNDVQKG--SKKSAEDLDKLIKIE 60

Query: 116 KGLFPFNGTLPDFLYAPIQAFGWKKFLKG 139
           K L PFN  LP+FLY PI+A  WKK   G
Sbjct: 61  KRLLPFNDHLPNFLYGPIKALKWKKDYTG 84

The following BLAST results are available for this feature:

BLAST of PI0008986.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008986.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TBU7	7.0e-09	38.46	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DQE7	7.0e-09	38.46	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BEA4	1.1e-06	47.54	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UFG4	1.1e-06	49.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UQ22	1.9e-06	42.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0008986.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK25768.1	1.4e-08	38.46	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0038829.1	1.4e-08	38.46	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0053237.1	2.3e-06	49.23	hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa]	[more]
TYJ97633.1	2.3e-06	47.54	hypothetical protein E5676_scaffold469G00170 [Cucumis melo var. makuwa]	[more]
KAA0056727.1	3.9e-06	42.70	hypothetical protein E6C27_scaffold29G00210 [Cucumis melo var. makuwa] >TYK21191...	[more]

BLAST of PI0008986.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 8..28
None	No IPR available	COILS	Coil	Coil	coord: 32..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..78

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0008986	PI0008986	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0008986.1-exon	PI0008986.1-exon-chr06:14995625..14996083	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0008986.1-cds	PI0008986.1-cds-chr06:14995625..14996083	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0008986.1	PI0008986.1-protein	polypeptide