PI0008166.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0008166.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	LOB domain-containing protein
Location	chr01: 7472183 .. 7474522 (-)
Sequence length	595
RNA-Seq Expression	PI0008166.1
Synteny	PI0008166.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTATTCACACAATATATTATTATAGTTAATTACCAAGATCAATTTCTGAAGATTAATTATATAGTAATAATATTATAGTACTGATCATAAAATTAAATGGCATCGTCCGAGATGATCATGATGAATGGGAGCTGCAAAAAGGGGAATGGGGCAGCGGCGCCCTGCGCTGCGTGCAAGCTTTTGCGCCGGCGATGTGCTCACGACTGTGTTTTTGCTCCTTATTTTCCCGCGGATCATCCCCACAAATTCTCCAGTGTTCACAAGGTCTTTGGTGCTAGTAATGTCAGCAAATTGTTGCAGGTTCATTCCAATAATCTCCTTTCTCTCTTTCTTTTGAGTTGCACAAAAATGATTTTAATAATCACTTATTTTAAATCTATCAAGAATATGAGGATATCTACTAATTAATTACCTAAAAATGGTATTGCGATTTCAACTGATCATTTTCAGCTATATATTGAAAATAACTATATATGTTACAAATTAGGGAAAGTTTGTTTAGTACTACTACAATATCTATTTTTCCATCTCTCTTCTCATTGGATTCTATATCATTTCTAATGGGTGACAATTTAATGATGGGAGTAATATATGTAGTATGTATTTATGTTGTTATATTGTAGTATTGAAATTTTTCTTTAAAAATGAATGAGAAAATTATCTAATATGTAGTTAATATTGAATTATGATCCAATCCAGTATTTGACTTAGAGAGATTAAATCATTAGTCATGAGTTTTGAGATTATTTTTTTTGTCTATTTTTGTGGCTGCCTAGCTAAAACTATGTACTTAATTTCAATTTTGGTATCTAATAGCTCCTAAACTTAAAATTTCTAAAAACTAATTCATCATTTAAATATTATACATTTAAATTTTATGCCTAATAGAATTCAATACTTCTAATTTTTTTTTTGTCTAGTCCCTAATTTATGGGCTAAAATTTGAATTTTGAAAATGGAAGGATTAGAATTAAAAAAAAATTAATTTATTAGAAATATAATTTGTATTGGCCAACCCAGTATTACGTGTCTTTTAGTAATGGAGTTCTCTCTCTACTTTTAAAAAGCAAGAGAAGGCTTTCTTTTGCAAATTATTCTTCATCTCACATGTAAGAAAGAAAAGGGTTTGTTTCAGGTGTCCAATTTAGAGAAGAATAAAATGTAATTTATTTGAATTTACATTTTTTTTTATTTATTTTTTTGTTGTTGTTGGTCTTGGCGTGGGGTTAGAATGATAGAGATGTTTCGTCAATAGGTGTGGCGGGAAACTTTAACAATCTAATATATATACTTTTTAATCACTAACTATTGGCGTAATGCTGACGTTTTAATCATTTCTACAGTGAATGGAGGCTTAAACGTCATGTCAATCTTTCCTACCTCCCACCTACACCGACAATGTCGTTTTAACCTTCTTAAATTTTTTAAGTCAAACATTTTTATACCAATCAATCCATCTATTTGTAGTTGCTTAAATAATTAATGTCACGCTTACAAAATAAATGAAAGTTAACTCATCAACGCGCACTTTAGCTTTTTACATACACACCTCTCTTCTAACCCTCATCAGATGCCCATCTTCGTTTTTCTTTACTCCATTCCAATTTTTCTTGGGAGATGTACAACAACGTTGTTGAAGAGGGAAGAAAAATGAAAATTATGATACATGCGCCCATCATATTACGGCTATATAACTACTTTGTGGCGACACAGAGATTGAAAGTAATGCAATATAAAACATGCATGGTCAGTGCTCTTTGATCTAAACATAAGGTGGTTGGGTGGGTGATTAATCATTTAGGGAACAATCCAACAAAAATCTCTCAGAACAACTTATTCTTTTTTATGTATTATATATTTAGGTAGAATGAGAGTATATGAGAATTTGAATCCGTCGTGTTTAGAAAATGAGGACATGTGGAGTTCTTCATCTCAATAATTGTTTTATTTTATTTTATTTTTCTCTTTTCTAAAAGTAAGTTATAGTTTAGAGAGTTGTGGAAGTTGCCATAACAATTTCGTGATGGGCATGTTGAATAATTCAGGAGTTGCCAGAGCACCAACGGAGCGACGCAGTGAGTTCGATGGTATATGAGGCAAACGCGAGGATTCGAGATCCGGTGTACGGGTGCGTGGGAACAATATCATGTCTACAACAGCAAGTGGATGCATTGCAACAACAACTAGCAATGACACAGGCCACCCTGGTTCAATTGAAAATGGGGCAATTTACAACAACATCACAATCATCATCTAGTACAGATGACCTCCTTCCTCCTCCGCCCAATATCAATGTGTCCGCATCCTCATCCTTATGGTCTTGCTAGTAATTTCTTT

mRNA sequence

GTTTTATTCACACAATATATTATTATAGTTAATTACCAAGATCAATTTCTGAAGATTAATTATATAGTAATAATATTATAGTACTGATCATAAAATTAAATGGCATCGTCCGAGATGATCATGATGAATGGGAGCTGCAAAAAGGGGAATGGGGCAGCGGCGCCCTGCGCTGCGTGCAAGCTTTTGCGCCGGCGATGTGCTCACGACTGTGTTTTTGCTCCTTATTTTCCCGCGGATCATCCCCACAAATTCTCCAGTGTTCACAAGGTCTTTGGTGCTAGTAATGTCAGCAAATTGTTGCAGGAGTTGCCAGAGCACCAACGGAGCGACGCAGTGAGTTCGATGGTATATGAGGCAAACGCGAGGATTCGAGATCCGGTGTACGGGTGCGTGGGAACAATATCATGTCTACAACAGCAAGTGGATGCATTGCAACAACAACTAGCAATGACACAGGCCACCCTGGTTCAATTGAAAATGGGGCAATTTACAACAACATCACAATCATCATCTAGTACAGATGACCTCCTTCCTCCTCCGCCCAATATCAATGTGTCCGCATCCTCATCCTTATGGTCTTGCTAGTAATTTCTTT

Coding sequence (CDS)

ATGGCATCGTCCGAGATGATCATGATGAATGGGAGCTGCAAAAAGGGGAATGGGGCAGCGGCGCCCTGCGCTGCGTGCAAGCTTTTGCGCCGGCGATGTGCTCACGACTGTGTTTTTGCTCCTTATTTTCCCGCGGATCATCCCCACAAATTCTCCAGTGTTCACAAGGTCTTTGGTGCTAGTAATGTCAGCAAATTGTTGCAGGAGTTGCCAGAGCACCAACGGAGCGACGCAGTGAGTTCGATGGTATATGAGGCAAACGCGAGGATTCGAGATCCGGTGTACGGGTGCGTGGGAACAATATCATGTCTACAACAGCAAGTGGATGCATTGCAACAACAACTAGCAATGACACAGGCCACCCTGGTTCAATTGAAAATGGGGCAATTTACAACAACATCACAATCATCATCTAGTACAGATGACCTCCTTCCTCCTCCGCCCAATATCAATGTGTCCGCATCCTCATCCTTATGGTCTTGCTAG

Protein sequence

MASSEMIMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQATLVQLKMGQFTTTSQSSSSTDDLLPPPPNINVSASSSLWSC

Homology

[Close]

BLAST of PI0008166.1 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.0e-44
Identity = 100/173 (57.80%), Postives = 119/173 (68.79%), Query Frame = 0


Query: 9   MNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQ 68
           M  S +K  GAA+PCAACKLLRRRCA DCVF+PYFPAD P KF++VH+VFGASNV+K+LQ
Sbjct: 1   MKESSRK-QGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQ 60

Query: 69  ELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQATLVQLKMG 128
           ELP HQR DAVSSMVYEANAR+RDPVYGCVG IS LQQQ+D LQ QLA+ QA +V L++ 
Sbjct: 61  ELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVR 120

Query: 129 QFT----------TTSQSSSSTDDLLPPPPNINV----------SASSSLWSC 162
           Q T          + S S S +   + P  N  +          S   S+WSC
Sbjct: 121 QSTNFPGHGLCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWSC 172

[Close]

BLAST of PI0008166.1 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-40
Identity = 79/112 (70.54%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 16  GNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEHQR 75
           G   ++PCA+CKLLRRRCA DC+FAPYFP D PHKF+ VHKVFGASNVSK+LQELP HQR
Sbjct: 2   GGPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQR 61

Query: 76  SDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQATLVQLKM 128
           +DAV+S+V+EANAR+RDPVYGCVG IS LQ QV  LQ QLA+ QA ++ ++M
Sbjct: 62  ADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQM 113

[Close]

BLAST of PI0008166.1 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.3e-36
Identity = 74/107 (69.16%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 21  APCAACKLLRRRCAHD-CVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEHQRSDAV 80
           +PCA CKLLRR+C  D CVFAPYFPA  P+KF+ VHK+FGASNV+K+LQEL E+ RSDAV
Sbjct: 13  SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAV 72

Query: 81  SSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQATLVQLK 127
            SMVYEANARI+DPVYGCVGTIS L +Q++ LQ QLA  QA L+ ++
Sbjct: 73  DSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR 119

[Close]

BLAST of PI0008166.1 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 6.8e-36
Identity = 71/112 (63.39%), Postives = 88/112 (78.57%), Query Frame = 0


Query: 22  PCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEHQRSDAVSS 81
           PCAACKLLRRRCA +C F+PYF    PHKF+SVHKVFGASNVSK+L E+PE QR+DA +S
Sbjct: 45  PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANS 104

Query: 82  MVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQATLVQLKMGQFTTT 134
           +VYEAN R+RDPVYGC+G IS LQQQV ALQ +L   ++ +++ K  +   T
Sbjct: 105 LVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVAT 156

[Close]

BLAST of PI0008166.1 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 8.3e-34
Identity = 71/107 (66.36%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 21  APCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEHQRSDAVS 80
           +PCAACK+LRRRCA  CV APYFP   P KF+  H+VFGASN+ K LQELPE QR+DAV+
Sbjct: 54  SPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 113

Query: 81  SMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQATLVQLKM 128
           SMVYEA AR+RDPVYGC G I  LQ+QV  LQ QLA TQ  LV +++
Sbjct: 114 SMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQL 160

[Close]

BLAST of PI0008166.1 vs. ExPASy TrEMBL
Match: A0A0A0K5P4 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237840 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.2e-79
Identity = 154/162 (95.06%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MASSE-MIMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60
           MASSE M+MMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG
Sbjct: 1   MASSEMMMMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60

Query: 61  ASNVSKLLQELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQ 120
           ASNVSKLLQELPE QRSDAVSSMVYEANARIRDPVYGCVG ISCLQQQVDALQQQLA+TQ
Sbjct: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQ 120

Query: 121 ATLVQLKMGQFTTTSQSSSSTDDLLPPPPNINVSASSSLWSC 162
           A LVQ+KMGQFTTTSQSSSSTDDLLPPPPNINV+ASSSLWSC
Sbjct: 121 AQLVQMKMGQFTTTSQSSSSTDDLLPPPPNINVAASSSLWSC 162

[Close]

BLAST of PI0008166.1 vs. ExPASy TrEMBL
Match: A0A5A7U720 (LOB domain-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold511G00280 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.3e-77
Identity = 153/161 (95.03%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MASSEMIMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGA 60
           MASSEM MM+GSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGA
Sbjct: 1   MASSEM-MMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGA 60

Query: 61  SNVSKLLQELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQA 120
           SNVSKLLQELPE QRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLA+TQA
Sbjct: 61  SNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQA 120

Query: 121 TLVQLKMGQFTTTSQSSSSTDDLLPPPPNINVSASSSLWSC 162
            LVQLKMGQFTTTSQSSSSTDD L PPPNINV+ASSSLWSC
Sbjct: 121 QLVQLKMGQFTTTSQSSSSTDDFLSPPPNINVAASSSLWSC 160

[Close]

BLAST of PI0008166.1 vs. ExPASy TrEMBL
Match: A0A1S3BGP4 (LOB domain-containing protein 4-like OS=Cucumis melo OX=3656 GN=LOC103489649 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.3e-77
Identity = 153/161 (95.03%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MASSEMIMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGA 60
           MASSEM MM+GSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGA
Sbjct: 1   MASSEM-MMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGA 60

Query: 61  SNVSKLLQELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQA 120
           SNVSKLLQELPE QRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLA+TQA
Sbjct: 61  SNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQA 120

Query: 121 TLVQLKMGQFTTTSQSSSSTDDLLPPPPNINVSASSSLWSC 162
            LVQLKMGQFTTTSQSSSSTDD L PPPNINV+ASSSLWSC
Sbjct: 121 QLVQLKMGQFTTTSQSSSSTDDFLSPPPNINVAASSSLWSC 160

[Close]

BLAST of PI0008166.1 vs. ExPASy TrEMBL
Match: A0A6J1EVU9 (LOB domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111437046 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.1e-57
Identity = 121/151 (80.13%), Postives = 130/151 (86.09%), Query Frame = 0


Query: 8   MMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLL 67
           MM GSCKK  GA +PCAACKLLRRRC  DCVFAPYFPAD PHKFSSVHKVFGASNV+KLL
Sbjct: 5   MMKGSCKK--GAPSPCAACKLLRRRCTQDCVFAPYFPADQPHKFSSVHKVFGASNVTKLL 64

Query: 68  QELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQATLVQLKM 127
           QELPE  RSDAVSSMVYEANARIRDP+YGCVGTISCLQ+QVDALQQQLAMTQA L+  KM
Sbjct: 65  QELPEQHRSDAVSSMVYEANARIRDPIYGCVGTISCLQRQVDALQQQLAMTQAQLLHFKM 124

Query: 128 GQFTTTSQSSSSTDDLLPPPPNINVSASSSL 159
            QF+  SQ  SSTDD+LP PPN NV + +SL
Sbjct: 125 AQFSLASQ-PSSTDDVLPSPPNTNVPSFTSL 152

[Close]

BLAST of PI0008166.1 vs. ExPASy TrEMBL
Match: A0A6J1HZU0 (LOB domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111468420 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 9.2e-52
Identity = 115/146 (78.77%), Postives = 126/146 (86.30%), Query Frame = 0


Query: 18  GAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEHQRSD 77
           GAA PCAACKLLRRRCA  CVFAPYFPA HPHK SSVH+VFGASNVSKLLQEL EHQRSD
Sbjct: 2   GAATPCAACKLLRRRCAQHCVFAPYFPAHHPHKCSSVHEVFGASNVSKLLQELGEHQRSD 61

Query: 78  AVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQATLVQLKMGQFTTTSQSS 137
           AVS MVYEANARIRD V GCVGTI+CLQ+QVDALQQ+LA+TQA L+QLKM QF ++++SS
Sbjct: 62  AVSWMVYEANARIRDQVNGCVGTIACLQRQVDALQQKLAITQAQLLQLKMAQF-SSAKSS 121

Query: 138 SSTDDLLPPPP--NINVSASSSLWSC 162
           S  + LLPP P  NINV AS SLWSC
Sbjct: 122 SVGNLLLPPLPNININVGASPSLWSC 146

[Close]

BLAST of PI0008166.1 vs. NCBI nr
Match: XP_004139827.1 (LOB domain-containing protein 4 [Cucumis sativus] >KGN44269.1 hypothetical protein Csa_015717 [Cucumis sativus])

HSP 1 Score: 303.5 bits (776), Expect = 1.1e-78
Identity = 154/162 (95.06%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MASSE-MIMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60
           MASSE M+MMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG
Sbjct: 1   MASSEMMMMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60

Query: 61  ASNVSKLLQELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQ 120
           ASNVSKLLQELPE QRSDAVSSMVYEANARIRDPVYGCVG ISCLQQQVDALQQQLA+TQ
Sbjct: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQ 120

Query: 121 ATLVQLKMGQFTTTSQSSSSTDDLLPPPPNINVSASSSLWSC 162
           A LVQ+KMGQFTTTSQSSSSTDDLLPPPPNINV+ASSSLWSC
Sbjct: 121 AQLVQMKMGQFTTTSQSSSSTDDLLPPPPNINVAASSSLWSC 162

[Close]

BLAST of PI0008166.1 vs. NCBI nr
Match: XP_008447124.1 (PREDICTED: LOB domain-containing protein 4-like [Cucumis melo] >KAA0051088.1 LOB domain-containing protein 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 298.9 bits (764), Expect = 2.6e-77
Identity = 153/161 (95.03%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MASSEMIMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGA 60
           MASSEM MM+GSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGA
Sbjct: 1   MASSEM-MMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGA 60

Query: 61  SNVSKLLQELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQA 120
           SNVSKLLQELPE QRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLA+TQA
Sbjct: 61  SNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQA 120

Query: 121 TLVQLKMGQFTTTSQSSSSTDDLLPPPPNINVSASSSLWSC 162
            LVQLKMGQFTTTSQSSSSTDD L PPPNINV+ASSSLWSC
Sbjct: 121 QLVQLKMGQFTTTSQSSSSTDDFLSPPPNINVAASSSLWSC 160

[Close]

BLAST of PI0008166.1 vs. NCBI nr
Match: XP_038888383.1 (LOB domain-containing protein 4-like [Benincasa hispida])

HSP 1 Score: 287.0 bits (733), Expect = 1.0e-73
Identity = 149/162 (91.98%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 1   MASSE-MIMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60
           MASSE M+MMNGSCKKG+G AAPCAACKLLRRRCA DCVFAPYFPAD PHKFSSVHKVFG
Sbjct: 1   MASSEMMMMMNGSCKKGSG-AAPCAACKLLRRRCAQDCVFAPYFPADQPHKFSSVHKVFG 60

Query: 61  ASNVSKLLQELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQ 120
           ASNVSKLLQELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQ+QVDALQQQLAMTQ
Sbjct: 61  ASNVSKLLQELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQRQVDALQQQLAMTQ 120

Query: 121 ATLVQLKMGQFTTTSQSSSSTDDLLPPPPNINVSASSSLWSC 162
           A LVQLKMGQFT+TSQSSSSTDDLLP PPNIN+ AS SLWSC
Sbjct: 121 AQLVQLKMGQFTSTSQSSSSTDDLLPSPPNINMGASPSLWSC 161

[Close]

BLAST of PI0008166.1 vs. NCBI nr
Match: KAG7023005.1 (LOB domain-containing protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 232.6 bits (592), Expect = 2.3e-57
Identity = 121/151 (80.13%), Postives = 130/151 (86.09%), Query Frame = 0


Query: 8   MMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLL 67
           MM GSCKK  GA +PCAACKLLRRRC  DCVFAPYFPAD PHKFSSVHKVFGASNV+KLL
Sbjct: 5   MMKGSCKK--GAPSPCAACKLLRRRCTQDCVFAPYFPADQPHKFSSVHKVFGASNVTKLL 64

Query: 68  QELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQATLVQLKM 127
           QELPE  RSDAVSSMVYEANARIRDP+YGCVGTISCLQ+QVDALQQQLAMTQA L+  KM
Sbjct: 65  QELPEQHRSDAVSSMVYEANARIRDPIYGCVGTISCLQRQVDALQQQLAMTQAQLLHFKM 124

Query: 128 GQFTTTSQSSSSTDDLLPPPPNINVSASSSL 159
            QF+  SQ  SSTDD+LP PPN NV + +SL
Sbjct: 125 AQFSLASQ-PSSTDDVLPSPPNTNVPSFTSL 152

[Close]

BLAST of PI0008166.1 vs. NCBI nr
Match: XP_022930643.1 (LOB domain-containing protein 4-like [Cucurbita moschata] >KAG6589307.1 LOB domain-containing protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 232.6 bits (592), Expect = 2.3e-57
Identity = 121/151 (80.13%), Postives = 130/151 (86.09%), Query Frame = 0


Query: 8   MMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLL 67
           MM GSCKK  GA +PCAACKLLRRRC  DCVFAPYFPAD PHKFSSVHKVFGASNV+KLL
Sbjct: 5   MMKGSCKK--GAPSPCAACKLLRRRCTQDCVFAPYFPADQPHKFSSVHKVFGASNVTKLL 64

Query: 68  QELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQATLVQLKM 127
           QELPE  RSDAVSSMVYEANARIRDP+YGCVGTISCLQ+QVDALQQQLAMTQA L+  KM
Sbjct: 65  QELPEQHRSDAVSSMVYEANARIRDPIYGCVGTISCLQRQVDALQQQLAMTQAQLLHFKM 124

Query: 128 GQFTTTSQSSSSTDDLLPPPPNINVSASSSL 159
            QF+  SQ  SSTDD+LP PPN NV + +SL
Sbjct: 125 AQFSLASQ-PSSTDDVLPSPPNTNVPSFTSL 152

[Close]

BLAST of PI0008166.1 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 181.0 bits (458), Expect = 7.5e-46
Identity = 100/173 (57.80%), Postives = 119/173 (68.79%), Query Frame = 0


Query: 9   MNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQ 68
           M  S +K  GAA+PCAACKLLRRRCA DCVF+PYFPAD P KF++VH+VFGASNV+K+LQ
Sbjct: 1   MKESSRK-QGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQ 60

Query: 69  ELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQATLVQLKMG 128
           ELP HQR DAVSSMVYEANAR+RDPVYGCVG IS LQQQ+D LQ QLA+ QA +V L++ 
Sbjct: 61  ELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVR 120

Query: 129 QFT----------TTSQSSSSTDDLLPPPPNINV----------SASSSLWSC 162
           Q T          + S S S +   + P  N  +          S   S+WSC
Sbjct: 121 QSTNFPGHGLCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWSC 172

[Close]

BLAST of PI0008166.1 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 167.5 bits (423), Expect = 8.5e-42
Identity = 79/112 (70.54%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 16  GNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEHQR 75
           G   ++PCA+CKLLRRRCA DC+FAPYFP D PHKF+ VHKVFGASNVSK+LQELP HQR
Sbjct: 2   GGPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQR 61

Query: 76  SDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQATLVQLKM 128
           +DAV+S+V+EANAR+RDPVYGCVG IS LQ QV  LQ QLA+ QA ++ ++M
Sbjct: 62  ADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQM 113

[Close]

BLAST of PI0008166.1 vs. TAIR 10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9 )

HSP 1 Score: 153.3 bits (386), Expect = 1.7e-37
Identity = 74/107 (69.16%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 21  APCAACKLLRRRCAHD-CVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEHQRSDAV 80
           +PCA CKLLRR+C  D CVFAPYFPA  P+KF+ VHK+FGASNV+K+LQEL E+ RSDAV
Sbjct: 13  SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAV 72

Query: 81  SSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQATLVQLK 127
            SMVYEANARI+DPVYGCVGTIS L +Q++ LQ QLA  QA L+ ++
Sbjct: 73  DSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR 119

[Close]

BLAST of PI0008166.1 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 151.8 bits (382), Expect = 4.8e-37
Identity = 71/112 (63.39%), Postives = 88/112 (78.57%), Query Frame = 0


Query: 22  PCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEHQRSDAVSS 81
           PCAACKLLRRRCA +C F+PYF    PHKF+SVHKVFGASNVSK+L E+PE QR+DA +S
Sbjct: 45  PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANS 104

Query: 82  MVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQATLVQLKMGQFTTT 134
           +VYEAN R+RDPVYGC+G IS LQQQV ALQ +L   ++ +++ K  +   T
Sbjct: 105 LVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVAT 156

[Close]

BLAST of PI0008166.1 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 144.8 bits (364), Expect = 5.9e-35
Identity = 71/107 (66.36%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 21  APCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEHQRSDAVS 80
           +PCAACK+LRRRCA  CV APYFP   P KF+  H+VFGASN+ K LQELPE QR+DAV+
Sbjct: 54  SPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 113

Query: 81  SMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAMTQATLVQLKM 128
           SMVYEA AR+RDPVYGC G I  LQ+QV  LQ QLA TQ  LV +++
Sbjct: 114 SMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQL 160

The following BLAST results are available for this feature:

BLAST of PI0008166.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHE9	1.0e-44	57.80	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8LBW3	1.2e-40	70.54	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SA51	2.3e-36	69.16	LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=...	[more]
Q8L5T5	6.8e-36	63.39	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]
Q9SK08	8.3e-34	66.36	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]

BLAST of PI0008166.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5P4	5.2e-79	95.06	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237840 PE=3 SV...	[more]
A0A5A7U720	1.3e-77	95.03	LOB domain-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BGP4	1.3e-77	95.03	LOB domain-containing protein 4-like OS=Cucumis melo OX=3656 GN=LOC103489649 PE=...	[more]
A0A6J1EVU9	1.1e-57	80.13	LOB domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114370...	[more]
A0A6J1HZU0	9.2e-52	78.77	LOB domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111468420...	[more]

BLAST of PI0008166.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139827.1	1.1e-78	95.06	LOB domain-containing protein 4 [Cucumis sativus] >KGN44269.1 hypothetical prote...	[more]
XP_008447124.1	2.6e-77	95.03	PREDICTED: LOB domain-containing protein 4-like [Cucumis melo] >KAA0051088.1 LOB...	[more]
XP_038888383.1	1.0e-73	91.98	LOB domain-containing protein 4-like [Benincasa hispida]	[more]
KAG7023005.1	2.3e-57	80.13	LOB domain-containing protein 3, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022930643.1	2.3e-57	80.13	LOB domain-containing protein 4-like [Cucurbita moschata] >KAG6589307.1 LOB doma...	[more]

BLAST of PI0008166.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31320.1	7.5e-46	57.80	LOB domain-containing protein 4	[more]
AT2G30130.1	8.5e-42	70.54	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G16530.1	1.7e-37	69.16	ASYMMETRIC LEAVES 2-like 9	[more]
AT2G40470.1	4.8e-37	63.39	LOB domain-containing protein 15	[more]
AT2G28500.1	5.9e-35	66.36	LOB domain-containing protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 101..121
None	No IPR available	PANTHER	PTHR31301:SF58	LOB DOMAIN-CONTAINING PROTEIN 3	coord: 12..139
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 12..139
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 22..119 e-value: 3.6E-43 score: 146.2
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 21..122 score: 26.756956

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0008166	PI0008166	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0008166.1-exon	PI0008166.1-exon-chr01:7472183..7472474	exon
PI0008166.1-exon	PI0008166.1-exon-chr01:7474220..7474522	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0008166.1-three_prime_utr	PI0008166.1-three_prime_utr-chr01:7472183..7472192	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0008166.1-cds	PI0008166.1-cds-chr01:7472193..7472474	CDS
PI0008166.1-cds	PI0008166.1-cds-chr01:7474220..7474423	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0008166.1-five_prime_utr	PI0008166.1-five_prime_utr-chr01:7474424..7474522	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0008166.1	PI0008166.1-protein	polypeptide