PI0006831.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0006831.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein NUCLEAR FUSION DEFECTIVE 6
Location	chr05: 748471 .. 751405 (+)
Sequence length	639
RNA-Seq Expression	PI0006831.1
Synteny	PI0006831.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTCCACTGCCTCAAAGCTTCATTCGGAACGAAGAAATCTCCAATGGCGTCCTTAAAGGCAGTCTCTCGGTTATCATCCCGCTTGCAATCCCTCACTCCAAAGTTCAACAAAAAGACTTCATCTTCTGAGCTATTTTCATTCAAATCTACTTGTCAATCTCAGCCTTCCGCAGCTTCTACATCTCGTCTTCATTGCACTTCGCGGTAAGACTTGTCTCTTCCCTCCATTTTCAATCCCATTCATCTTAGAATCATAGAATCATTAGTTACAGGAAGAAATTCGGTTCAATTCATAACTGTGGAGTAGATTTTGACTATAGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTAATTTCAAGTCTGACCATTGAATCTCAAGGATGGGGTTTGGTTCCTCAGGGTATGTTTTGCTTAAGTTTCTTCTTGCATTTGGGTTTTGTGAATGCTGACGATTCTCCGTTATTGTATGTGCTCGAGGAATGAGCATTCCAAATATCCTTTTGTTTGTTCACACTTCATAGAATTTTGTTTCTAAAAATAATGTGGGTTGTTTTTTTATTTTTAGGATGATCATAGTTTGGGTCTAGTTCAATGCATATGTCTTGCGGAATTCTAGTACGATTGAGTTAATCGGCCCGATGTTTGCCTGTACTACTAGAATTGTCATGACCTTTGAATTGTGATTAGAGTCATATGGATGAAAATGATGGATGGGATATATCACTTTGATTGGTGTATGAAGGAACAAACTGAATCATGCAATCAACTTTAGTATTTGAACGAAAATTTAATATAACTGATCATACATACCAAGTAGCCATAGTTGATTTCACAATTTTAGCATTAGTCTAGTTTTTCAACAACTTAACTGCAGTAGATTACTTTTATGTGTTAACTATTCTAGTTTTTCACCAAGCTTCAAAGTAGTATCAAGTGATGTTGTTTTCAACTAGTCGATGATTAAGAATATTTCCGTTGTTCAATTTATGAACCCTTACAAGAAATTGTGATGCTATCTTAACATTAGTGTCATCGTATCATTTTTATTCTATCTATTATTACCACTGTCTGAAATGTGAGTCCCATACTAATGCATATCTTAGTTATTTTCAATGGAATATCACTTGATCCTACACTCCACAGAACTAGGACACTTAGAACTAATGGTTGTCATGACTCATGGGTGGTCTCTAAACAAGCTTTTGGTGGGTGCAAGTGTTTGGGCTATTTGGCCGGAAAGAATTCAAAGAAATGGGATTGTTGAACATTTACGTTTTCTCCACCTGCAATAGACTGTTGAACCTTTCTTTTTTGGTTATTTGAGCTATTGTAGTTTTTATTCAGTTGGTGTTCGAGTTAAGAGCAGGGAGAGTTCCTTTTTTGTGTGTGGGTGTGGGTGTTTAATTTGTGGCTAATTGGGAGGTTCTCTTCATCTCCCCCTCCAATGTAAAATCCTCCTTTGGACAATACCTTCTTCCTCGAATGTTGTCACATCTCATGGTGACAATGAAACTACCCGAAGAGAGTAATCTATTTGATATCTTTCGTTTATTGTAAAAAAAATAAACATTACTAATTTCAATGGGAAGATACCCTAGAAGTTGGTAGCATAATTGTTTATTACCTCACTTGCACCTGCACCCTCATATGGTATGCTCGTTCTGGTGGTTATGAGGATAACGACTCTTTTGTTGTTCATTCTTTGCTGGTTCACTGGGAAGTTTTGGGAATTGCGATTTTGTTTTTGTGGTCTTGGGTAGCTCTTCCAAAAACGAAGTTGTATACTTCAGATGCTACTACGTTCAAAATTCAGAAACCAGGCTAAATCAATCTAGACTGATGCTATATTGATTATCTTTGTGTGAGGCTCGGAGAGTGAAAATAGTCGGAATTTTCACAAAAATCTAGGTAATCAAATTATTGGCTGTCTTTCTTGGCTCGTAAACTTCAGTTAGATGTCTAGTAGCCTTTCTCCTCCCTTATGTTTTCTTTATAGTATTTGTAATACAGAGTTTATCTCGTAAAAAGTTACTATTTTTGTCTTCCCCATAATAAACACTAATTAAACTTCTGTGCTTGACAACGAGAAGAGTAAGAGTGTGAAAGTGCAGGCTAAAGAAAAACATCTAGGGCGTTTTGGCACTAGTTCAGCATCTTCAAGCCTAGGTTTAATGTGTTTAGGGGTTTAGGTTGATGGTTAGGGAAGTCGTTGGGGTGCAGGTTTTGAAAGCATAGATTTAAATCAGTGTGAACCGTGAGGGGGCTTGAATAGTGGGTTATCGTTCAAACTCATTTGTTCCTCTGATAAAATTCGGTTTTGAAAACTCCACATTCTAAACATTGTTTAGGCTTGGGTAGCTAAACCCATGTCCCAAATACTTCTTTAAAGCTGTAGCGTTATATTATCTTTGCCCTTTGGTCACATAACAAGTTGTCACAAAATGACTTCTGAGTACTAACGTTAATATTTTTTAATTTCATTTATGGGAGAAAGTTATGCATGCAATTTTGTAGTTCACCATTTTAAGTAGCTTCATCAAGACAAGAACCCTCTTTGATGCTGTTTTATTTTTCCTGCAGGTATTTCAATGCCTTTATGACAAGCTTTGCTATGCAGGAACTTGTTCTTTGTAGTTTTCTTTTTATTGACAATTGGGGTTTCTTCTTACTTCTAGTCCTTTACAATCTACAAAAATGTAAACCTAAATTATTGCCTCTGATTTTCTTTTTGGTCCTAAATTGGATGAGGTTTAAAGTTAAATTTTCATCTTGTAATGAATCCAAGTGATTGATATACAACTTTCATGATTGTTGGATTTATTACCCTTGGAAAAGATGATGTAACTATGCTTTGAAGGACATCTTGTTGCAAATAGAATGGTTATGGATTCTTTC

mRNA sequence

CGTTCCACTGCCTCAAAGCTTCATTCGGAACGAAGAAATCTCCAATGGCGTCCTTAAAGGCAGTCTCTCGGTTATCATCCCGCTTGCAATCCCTCACTCCAAAGTTCAACAAAAAGACTTCATCTTCTGAGCTATTTTCATTCAAATCTACTTGTCAATCTCAGCCTTCCGCAGCTTCTACATCTCGTCTTCATTGCACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTAATTTCAAGTCTGACCATTGAATCTCAAGGATGGGGTTTGGTTCCTCAGGGTATTTCAATGCCTTTATGACAAGCTTTGCTATGCAGGAACTTGTTCTTTGTAGTTTTCTTTTTATTGACAATTGGGGTTTCTTCTTACTTCTAGTCCTTTACAATCTACAAAAATGTAAACCTAAATTATTGCCTCTGATTTTCTTTTTGGTCCTAAATTGGATGAGGTTTAAAGTTAAATTTTCATCTTGTAATGAATCCAAGTGATTGATATACAACTTTCATGATTGTTGGATTTATTACCCTTGGAAAAGATGATGTAACTATGCTTTGAAGGACATCTTGTTGCAAATAGAATGGTTATGGATTCTTTC

Coding sequence (CDS)

ATGGCGTCCTTAAAGGCAGTCTCTCGGTTATCATCCCGCTTGCAATCCCTCACTCCAAAGTTCAACAAAAAGACTTCATCTTCTGAGCTATTTTCATTCAAATCTACTTGTCAATCTCAGCCTTCCGCAGCTTCTACATCTCGTCTTCATTGCACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTAATTTCAAGTCTGACCATTGAATCTCAAGGATGGGGTTTGGTTCCTCAGGGTATTTCAATGCCTTTATGA

Protein sequence

MASLKAVSRLSSRLQSLTPKFNKKTSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL

Homology

[Close]

BLAST of PI0006831.1 vs. ExPASy TrEMBL
Match: A0A0A0LKT5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004120 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.5e-41
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLQSLTPKFNKKTSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
           MASLKAVSRLSSRLQSL PKFNK++SSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
           SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 99

[Close]

BLAST of PI0006831.1 vs. ExPASy TrEMBL
Match: A0A1S3C7U8 (uncharacterized protein LOC103497847 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497847 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.9e-40
Identity = 95/99 (95.96%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLQSLTPKFNKKTSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
           MASLKAVSRLSSRLQSL+PKFNK++SSSELFS KSTCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1   MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
           SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 99

[Close]

BLAST of PI0006831.1 vs. ExPASy TrEMBL
Match: A0A5A7V7B3 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00330 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.4e-37
Identity = 90/95 (94.74%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLTPKFNKKTSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
          MASLKAVSRLSSRLQSL+PKFNK++SSSELFS KSTCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGI 96
          SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG+
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM 95

[Close]

BLAST of PI0006831.1 vs. ExPASy TrEMBL
Match: A0A1S3C7Z3 (uncharacterized protein LOC103497847 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497847 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 8.8e-37
Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLTPKFNKKTSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
          MASLKAVSRLSSRLQSL+PKFNK++SSSELFS KSTCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ 94
          SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ 93

[Close]

BLAST of PI0006831.1 vs. ExPASy TrEMBL
Match: A0A6J1G399 (uncharacterized protein LOC111450380 OS=Cucurbita moschata OX=3662 GN=LOC111450380 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.7e-35
Identity = 86/99 (86.87%), Postives = 92/99 (92.93%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLQSLTPKFNKKTSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
           MASL+AVSRLSSRLQSL PK NK++ SSEL  FKS CQSQPSAASTSR+ CTSRLP+ELS
Sbjct: 1   MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60

Query: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
           SQGSLMPLHSAIAAARLISSL+IESQGWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGISMPL 99

[Close]

BLAST of PI0006831.1 vs. NCBI nr
Match: XP_004139345.1 (uncharacterized protein LOC101209110 [Cucumis sativus] >KGN60611.1 hypothetical protein Csa_019508 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 9.3e-41
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLQSLTPKFNKKTSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
           MASLKAVSRLSSRLQSL PKFNK++SSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
           SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 99

[Close]

BLAST of PI0006831.1 vs. NCBI nr
Match: XP_008458440.1 (PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo])

HSP 1 Score: 174.1 bits (440), Expect = 6.0e-40
Identity = 95/99 (95.96%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLQSLTPKFNKKTSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
           MASLKAVSRLSSRLQSL+PKFNK++SSSELFS KSTCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1   MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
           SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 99

[Close]

BLAST of PI0006831.1 vs. NCBI nr
Match: KAA0061549.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa] >TYK10723.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa])

HSP 1 Score: 165.2 bits (417), Expect = 2.8e-37
Identity = 90/95 (94.74%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLTPKFNKKTSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
          MASLKAVSRLSSRLQSL+PKFNK++SSSELFS KSTCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGI 96
          SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG+
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGM 95

[Close]

BLAST of PI0006831.1 vs. NCBI nr
Match: XP_008458447.1 (PREDICTED: uncharacterized protein LOC103497847 isoform X2 [Cucumis melo])

HSP 1 Score: 162.5 bits (410), Expect = 1.8e-36
Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLTPKFNKKTSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
          MASLKAVSRLSSRLQSL+PKFNK++SSSELFS KSTCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ 94
          SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ 93

[Close]

BLAST of PI0006831.1 vs. NCBI nr
Match: XP_038889658.1 (uncharacterized protein LOC120079520 [Benincasa hispida])

HSP 1 Score: 160.2 bits (404), Expect = 9.0e-36
Identity = 89/99 (89.90%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLQSLTPKFNKKTSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
           MASLK VSRLSSRLQSL PKFNK++S SEL  FKS CQSQPS ASTSRL CTSRLPVELS
Sbjct: 1   MASLKTVSRLSSRLQSLAPKFNKRSSYSELSPFKSPCQSQPSTASTSRLPCTSRLPVELS 60

Query: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
           SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 99

[Close]

BLAST of PI0006831.1 vs. TAIR 10
Match: AT1G55205.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13674.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.5 bits (223), Expect = 8.1e-19
Identity = 54/99 (54.55%), Postives = 74/99 (74.75%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLQSLTPKFNKKTSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
           MAS   + RLSS++ SLT K +K  ++  + S  S  +S   +++TSR++ + RLPVELS
Sbjct: 1   MASSSKICRLSSKIHSLTQKLSK--TNVHISSLPSPIKSSSPSSATSRINQSFRLPVELS 60

Query: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
              S++PLHSAIA+ARLISSL++ES+ WGLVPQGISMPL
Sbjct: 61  CCLSMLPLHSAIASARLISSLSVESKSWGLVPQGISMPL 97

[Close]

BLAST of PI0006831.1 vs. TAIR 10
Match: AT1G55205.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13674.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 81.6 bits (200), Expect = 3.8e-16
Identity = 50/96 (52.08%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLTPKFNKKTSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
          MAS   + RLSS++ SLT K +K  ++  + S  S  +S   +++TSR++ + RLPVELS
Sbjct: 1  MASSSKICRLSSKIHSLTQKLSK--TNVHISSLPSPIKSSSPSSATSRINQSFRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGIS 97
             S++PLHSAIA+ARLISSL++ES+ WGLVPQG S
Sbjct: 61 CCLSMLPLHSAIASARLISSLSVESKSWGLVPQGQS 94

[Close]

BLAST of PI0006831.1 vs. TAIR 10
Match: AT3G13674.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast hits to 76 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 81.6 bits (200), Expect = 3.8e-16
Identity = 52/100 (52.00%), Postives = 75/100 (75.00%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLQSLTPKFNKKTSSSELFSFKSTCQS-QPSAASTSRLHCTSRLPVEL 60
           MAS + + R SSRL+SL    + K  ++ + S  S  +S  PS+A++ RL+ +SRLPVEL
Sbjct: 1   MASSRVLGRFSSRLKSLCQNLSNK--NANVSSLPSPIKSASPSSATSCRLNRSSRLPVEL 60

Query: 61  SSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
           S   S++PLHSAIA++RL+SSL++ES+ WGLVPQG+S+PL
Sbjct: 61  S---SMIPLHSAIASSRLVSSLSVESKIWGLVPQGLSLPL 95

[Close]

BLAST of PI0006831.1 vs. TAIR 10
Match: AT4G39300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 2.7e-06
Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 0


Query: 24  KTSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTI 83
           +T + +  + K T  S P A+ +  +   SR+   L S  +++PLHSA+A+ARL SS+  
Sbjct: 21  RTVTQKSLNLKPTTTSSPFASMSQSIPRASRVLSALGSVETMIPLHSAVASARLRSSIAA 80

Query: 84  ESQGWGLVPQGISMPL 100
           +S  W L+ QG++ PL
Sbjct: 81  DSSCWSLLSQGLATPL 96

[Close]

BLAST of PI0006831.1 vs. TAIR 10
Match: AT4G39300.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11630.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 5.1e-05
Identity = 26/75 (34.67%), Postives = 44/75 (58.67%), Query Frame = 0


Query: 24 KTSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTI 83
          +T + +  + K T  S P A+ +  +   SR+   L S  +++PLHSA+A+ARL SS+  
Sbjct: 21 RTVTQKSLNLKPTTTSSPFASMSQSIPRASRVLSALGSVETMIPLHSAVASARLRSSIAA 80

Query: 84 ESQGWGLVPQGISMP 99
          +S  W L+ Q + +P
Sbjct: 81 DSSCWSLLSQELGVP 95

The following BLAST results are available for this feature:

BLAST of PI0006831.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0006831.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKT5	4.5e-41	96.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004120 PE=4 SV=1	[more]
A0A1S3C7U8	2.9e-40	95.96	uncharacterized protein LOC103497847 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7V7B3	1.4e-37	94.74	Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C7Z3	8.8e-37	95.70	uncharacterized protein LOC103497847 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1G399	3.7e-35	86.87	uncharacterized protein LOC111450380 OS=Cucurbita moschata OX=3662 GN=LOC1114503...	[more]

BLAST of PI0006831.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139345.1	9.3e-41	96.97	uncharacterized protein LOC101209110 [Cucumis sativus] >KGN60611.1 hypothetical ...	[more]
XP_008458440.1	6.0e-40	95.96	PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo]	[more]
KAA0061549.1	2.8e-37	94.74	protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa] >TYK10723.1 protei...	[more]
XP_008458447.1	1.8e-36	95.70	PREDICTED: uncharacterized protein LOC103497847 isoform X2 [Cucumis melo]	[more]
XP_038889658.1	9.0e-36	89.90	uncharacterized protein LOC120079520 [Benincasa hispida]	[more]

BLAST of PI0006831.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55205.1	8.1e-19	54.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G55205.2	3.8e-16	52.08	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G13674.1	3.8e-16	52.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G39300.1	2.7e-06	36.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G39300.2	5.1e-05	34.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33156:SF43	BNAANNG28360D PROTEIN	coord: 1..99
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 1..99

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0006831	PI0006831	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0006831.1-five_prime_utr	PI0006831.1-five_prime_utr-chr05:748471..748514	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0006831.1-exon	PI0006831.1-exon-chr05:748471..748675	exon
PI0006831.1-exon	PI0006831.1-exon-chr05:748792..748910	exon
PI0006831.1-exon	PI0006831.1-exon-chr05:751091..751405	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0006831.1-cds	PI0006831.1-cds-chr05:748515..748675	CDS
PI0006831.1-cds	PI0006831.1-cds-chr05:748792..748910	CDS
PI0006831.1-cds	PI0006831.1-cds-chr05:751091..751110	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0006831.1-three_prime_utr	PI0006831.1-three_prime_utr-chr05:751111..751405	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0006831.1	PI0006831.1-protein	polypeptide