PI0006439.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0006439.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	ULP_PROTEASE domain-containing protein
Location	chr12: 16601894 .. 16602384 (+)
Sequence length	399
RNA-Seq Expression	PI0006439.1
Synteny	PI0006439.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGGGATAACGTCAGGGTTTCTGTAGACGTGGTTGTTAACGGTGACTGCTCCGTCCCTATTCCAGAGAAAGAAGGTACATCCATGCTAAGCCAAGAGGTCGGATCACAATTGTTATGGCCTCGTGATTTGGTAATTGTGCAGAAGGGGAAGGTAACCACCTTGTCCAATCTATTTTTTTTTCGGATGTCAATGTACTCCAATATGTTATTAAGTACATTACTTCATTTTCCCATTTTTTTTAGAGGCAAAGCATGTTTAGCCAACCGGATCTTAAAGTTGGCCCACTGACCCCGATTCAGAGTTCTCCGGTTGCACTTCGATGTTTGCTTCGGGAACTTGAACACATTGGGTCTAAGATTCAAATGACCGTTCCCATCGAAGTTTTCGGAGTCCAACGAAAATGTTGCATATTCCTTGAGGTCCTCCAGGAGTTTTGTCACATGCAGCCTATATCCACTCAATGCATTGATGCATACATGATGTGA

mRNA sequence

ATGGAAGGGGATAACGTCAGGGTTTCTGTAGACGTGGTTGTTAACGGTGACTGCTCCGTCCCTATTCCAGAGAAAGAAGGTACATCCATGCTAAGCCAAGAGGTCGGATCACAATTGTTATGGCCTCGTGATTTGGTAATTGTGCAGAAGGGGAAGAGGCAAAGCATGTTTAGCCAACCGGATCTTAAAGTTGGCCCACTGACCCCGATTCAGAGTTCTCCGGTTGCACTTCGATGTTTGCTTCGGGAACTTGAACACATTGGGTCTAAGATTCAAATGACCGTTCCCATCGAAGTTTTCGGAGTCCAACGAAAATGTTGCATATTCCTTGAGGTCCTCCAGGAGTTTTGTCACATGCAGCCTATATCCACTCAATGCATTGATGCATACATGATGTGA

Coding sequence (CDS)

ATGGAAGGGGATAACGTCAGGGTTTCTGTAGACGTGGTTGTTAACGGTGACTGCTCCGTCCCTATTCCAGAGAAAGAAGGTACATCCATGCTAAGCCAAGAGGTCGGATCACAATTGTTATGGCCTCGTGATTTGGTAATTGTGCAGAAGGGGAAGAGGCAAAGCATGTTTAGCCAACCGGATCTTAAAGTTGGCCCACTGACCCCGATTCAGAGTTCTCCGGTTGCACTTCGATGTTTGCTTCGGGAACTTGAACACATTGGGTCTAAGATTCAAATGACCGTTCCCATCGAAGTTTTCGGAGTCCAACGAAAATGTTGCATATTCCTTGAGGTCCTCCAGGAGTTTTGTCACATGCAGCCTATATCCACTCAATGCATTGATGCATACATGATGTGA

Protein sequence

MEGDNVRVSVDVVVNGDCSVPIPEKEGTSMLSQEVGSQLLWPRDLVIVQKGKRQSMFSQPDLKVGPLTPIQSSPVALRCLLRELEHIGSKIQMTVPIEVFGVQRKCCIFLEVLQEFCHMQPISTQCIDAYMM

Homology

[Close]

BLAST of PI0006439.1 vs. ExPASy TrEMBL
Match: A0A5A7T2U8 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001300 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.4e-37
Identity = 85/132 (64.39%), Postives = 105/132 (79.55%), Query Frame = 0


Query: 1   MEGDNVRVSVDVVVNGDCSVPIPEKEGTSMLSQEVGSQLLWPRDLVIVQKGKRQSMFSQP 60
           M+GDNV+VSVD+V +G+C VPIP +EG +MLSQEVGSQLLWPR LVI    K +S++ Q 
Sbjct: 399 MDGDNVKVSVDMVTDGNCFVPIPTREGRTMLSQEVGSQLLWPRHLVIPLDEKMKSVY-QA 458

Query: 61  DLKVGPLT-PIQSSPVALRCLLRELEHIGSKIQMTVPIEVFGVQRKCCIFLEVLQEFCHM 120
           D ++  LT   + +PV LR LL EL++IGSKIQ+ VP +VFG +RKCCIFLE LQEFC M
Sbjct: 459 DPRLPSLTLNTKRAPVTLRLLLWELDYIGSKIQIHVPAKVFGYERKCCIFLEALQEFCQM 518

Query: 121 QPISTQCIDAYM 132
           QPISTQCIDA+M
Sbjct: 519 QPISTQCIDAFM 529

[Close]

BLAST of PI0006439.1 vs. ExPASy TrEMBL
Match: A0A5A7SM56 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G004940 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.8e-37
Identity = 84/132 (63.64%), Postives = 105/132 (79.55%), Query Frame = 0


Query: 1    MEGDNVRVSVDVVVNGDCSVPIPEKEGTSMLSQEVGSQLLWPRDLVIVQKGKRQSMFSQP 60
            M+GDNV+VSVD+V +G+C VP+P +EG +MLSQEVGSQLLWPR LVI    K +S++ Q 
Sbjct: 932  MDGDNVKVSVDMVTDGNCFVPVPTREGRTMLSQEVGSQLLWPRHLVIPLDEKMKSVY-QA 991

Query: 61   DLKVGPLT-PIQSSPVALRCLLRELEHIGSKIQMTVPIEVFGVQRKCCIFLEVLQEFCHM 120
            D ++  LT   + +PV LR LL EL++IGSKIQ+ VP +VFG +RKCCIFLE LQEFC M
Sbjct: 992  DPRLPSLTLNTKRAPVTLRLLLWELDYIGSKIQIHVPAKVFGYERKCCIFLEALQEFCQM 1051

Query: 121  QPISTQCIDAYM 132
            QPISTQCIDA+M
Sbjct: 1052 QPISTQCIDAFM 1062

[Close]

BLAST of PI0006439.1 vs. ExPASy TrEMBL
Match: A0A5A7TVG6 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G001320 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.4e-37
Identity = 84/132 (63.64%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 1   MEGDNVRVSVDVVVNGDCSVPIPEKEGTSMLSQEVGSQLLWPRDLVIVQKGKRQSMFSQP 60
           M GDNV+VSVD+V +G+C VP+P +EG +MLSQEVGSQLLWPR LVI    K +S++ Q 
Sbjct: 384 MNGDNVKVSVDMVTDGNCFVPVPTREGRTMLSQEVGSQLLWPRHLVIPLDEKMKSVY-QA 443

Query: 61  DLKVGPLT-PIQSSPVALRCLLRELEHIGSKIQMTVPIEVFGVQRKCCIFLEVLQEFCHM 120
           D ++  LT   + +PV LR LL EL++IGSKIQ+ VP +VFG +RKCCIFLE LQEFC M
Sbjct: 444 DSRLPSLTLNTKRAPVTLRLLLWELDYIGSKIQIHVPAKVFGYERKCCIFLEALQEFCQM 503

Query: 121 QPISTQCIDAYM 132
           QPISTQCIDA+M
Sbjct: 504 QPISTQCIDAFM 514

[Close]

BLAST of PI0006439.1 vs. ExPASy TrEMBL
Match: A0A5A7V975 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1290G00360 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 7.6e-36
Identity = 81/132 (61.36%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 1   MEGDNVRVSVDVVVNGDCSVPIPEKEGTSMLSQEVGSQLLWPRDLVIVQKGKRQSMFSQP 60
           M+GDNV+VSVD+V++G+C + +  +EG +MLSQEVGSQLLWPR LVI    K +S++ Q 
Sbjct: 409 MDGDNVKVSVDMVIDGNCFISVSTREGRTMLSQEVGSQLLWPRHLVIPLDEKMKSVY-QA 468

Query: 61  DLKVGPLT-PIQSSPVALRCLLRELEHIGSKIQMTVPIEVFGVQRKCCIFLEVLQEFCHM 120
           D ++  LT   + +PV LR LL EL++IGSKIQ+ VP +VFG +RKCCIFLE LQEFC M
Sbjct: 469 DPRLPSLTLNTKRAPVTLRLLLWELDYIGSKIQIHVPAKVFGYERKCCIFLEALQEFCQM 528

Query: 121 QPISTQCIDAYM 132
           QPISTQCIDA+M
Sbjct: 529 QPISTQCIDAFM 539

[Close]

BLAST of PI0006439.1 vs. ExPASy TrEMBL
Match: A0A5A7TLE7 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold943G00100 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.2e-35
Identity = 81/132 (61.36%), Postives = 103/132 (78.03%), Query Frame = 0


Query: 1   MEGDNVRVSVDVVVNGDCSVPIPEKEGTSMLSQEVGSQLLWPRDLVIVQKGKRQSMFSQP 60
           M+GDNV+VSVD+V +G+C VP+P +EG +MLSQE GSQLLWPR LVI    K +S++ Q 
Sbjct: 85  MDGDNVKVSVDMVTDGNCFVPVPTREGRTMLSQEFGSQLLWPRHLVIPLDEKMKSVY-QA 144

Query: 61  DLKVGPLT-PIQSSPVALRCLLRELEHIGSKIQMTVPIEVFGVQRKCCIFLEVLQEFCHM 120
           D ++  LT   + +PV LR LL EL++IGSKIQ+ VP +VF  +RKCCIFLE LQEFC M
Sbjct: 145 DPRLPSLTLNTKRAPVTLRLLLWELDYIGSKIQIHVPAKVFRYERKCCIFLEALQEFCQM 204

Query: 121 QPISTQCIDAYM 132
           QPISTQCI+A+M
Sbjct: 205 QPISTQCINAFM 215

[Close]

BLAST of PI0006439.1 vs. NCBI nr
Match: KAA0035941.1 (uncharacterized protein E6C27_scaffold56G001300 [Cucumis melo var. makuwa])

HSP 1 Score: 165.6 bits (418), Expect = 2.9e-37
Identity = 85/132 (64.39%), Postives = 105/132 (79.55%), Query Frame = 0


Query: 1   MEGDNVRVSVDVVVNGDCSVPIPEKEGTSMLSQEVGSQLLWPRDLVIVQKGKRQSMFSQP 60
           M+GDNV+VSVD+V +G+C VPIP +EG +MLSQEVGSQLLWPR LVI    K +S++ Q 
Sbjct: 399 MDGDNVKVSVDMVTDGNCFVPIPTREGRTMLSQEVGSQLLWPRHLVIPLDEKMKSVY-QA 458

Query: 61  DLKVGPLT-PIQSSPVALRCLLRELEHIGSKIQMTVPIEVFGVQRKCCIFLEVLQEFCHM 120
           D ++  LT   + +PV LR LL EL++IGSKIQ+ VP +VFG +RKCCIFLE LQEFC M
Sbjct: 459 DPRLPSLTLNTKRAPVTLRLLLWELDYIGSKIQIHVPAKVFGYERKCCIFLEALQEFCQM 518

Query: 121 QPISTQCIDAYM 132
           QPISTQCIDA+M
Sbjct: 519 QPISTQCIDAFM 529

[Close]

BLAST of PI0006439.1 vs. NCBI nr
Match: KAA0031708.1 (hypothetical protein E6C27_scaffold139G004940 [Cucumis melo var. makuwa])

HSP 1 Score: 165.2 bits (417), Expect = 3.7e-37
Identity = 84/132 (63.64%), Postives = 105/132 (79.55%), Query Frame = 0


Query: 1    MEGDNVRVSVDVVVNGDCSVPIPEKEGTSMLSQEVGSQLLWPRDLVIVQKGKRQSMFSQP 60
            M+GDNV+VSVD+V +G+C VP+P +EG +MLSQEVGSQLLWPR LVI    K +S++ Q 
Sbjct: 932  MDGDNVKVSVDMVTDGNCFVPVPTREGRTMLSQEVGSQLLWPRHLVIPLDEKMKSVY-QA 991

Query: 61   DLKVGPLT-PIQSSPVALRCLLRELEHIGSKIQMTVPIEVFGVQRKCCIFLEVLQEFCHM 120
            D ++  LT   + +PV LR LL EL++IGSKIQ+ VP +VFG +RKCCIFLE LQEFC M
Sbjct: 992  DPRLPSLTLNTKRAPVTLRLLLWELDYIGSKIQIHVPAKVFGYERKCCIFLEALQEFCQM 1051

Query: 121  QPISTQCIDAYM 132
            QPISTQCIDA+M
Sbjct: 1052 QPISTQCIDAFM 1062

[Close]

BLAST of PI0006439.1 vs. NCBI nr
Match: KAA0046954.1 (uncharacterized protein E6C27_scaffold230G001320 [Cucumis melo var. makuwa])

HSP 1 Score: 164.9 bits (416), Expect = 4.9e-37
Identity = 84/132 (63.64%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 1   MEGDNVRVSVDVVVNGDCSVPIPEKEGTSMLSQEVGSQLLWPRDLVIVQKGKRQSMFSQP 60
           M GDNV+VSVD+V +G+C VP+P +EG +MLSQEVGSQLLWPR LVI    K +S++ Q 
Sbjct: 384 MNGDNVKVSVDMVTDGNCFVPVPTREGRTMLSQEVGSQLLWPRHLVIPLDEKMKSVY-QA 443

Query: 61  DLKVGPLT-PIQSSPVALRCLLRELEHIGSKIQMTVPIEVFGVQRKCCIFLEVLQEFCHM 120
           D ++  LT   + +PV LR LL EL++IGSKIQ+ VP +VFG +RKCCIFLE LQEFC M
Sbjct: 444 DSRLPSLTLNTKRAPVTLRLLLWELDYIGSKIQIHVPAKVFGYERKCCIFLEALQEFCQM 503

Query: 121 QPISTQCIDAYM 132
           QPISTQCIDA+M
Sbjct: 504 QPISTQCIDAFM 514

[Close]

BLAST of PI0006439.1 vs. NCBI nr
Match: KAA0063750.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35
Identity = 81/132 (61.36%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 1   MEGDNVRVSVDVVVNGDCSVPIPEKEGTSMLSQEVGSQLLWPRDLVIVQKGKRQSMFSQP 60
           M+GDNV+VSVD+V++G+C + +  +EG +MLSQEVGSQLLWPR LVI    K +S++ Q 
Sbjct: 409 MDGDNVKVSVDMVIDGNCFISVSTREGRTMLSQEVGSQLLWPRHLVIPLDEKMKSVY-QA 468

Query: 61  DLKVGPLT-PIQSSPVALRCLLRELEHIGSKIQMTVPIEVFGVQRKCCIFLEVLQEFCHM 120
           D ++  LT   + +PV LR LL EL++IGSKIQ+ VP +VFG +RKCCIFLE LQEFC M
Sbjct: 469 DPRLPSLTLNTKRAPVTLRLLLWELDYIGSKIQIHVPAKVFGYERKCCIFLEALQEFCQM 528

Query: 121 QPISTQCIDAYM 132
           QPISTQCIDA+M
Sbjct: 529 QPISTQCIDAFM 539

[Close]

BLAST of PI0006439.1 vs. NCBI nr
Match: KAA0042401.1 (uncharacterized protein E6C27_scaffold943G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 158.3 bits (399), Expect = 4.6e-35
Identity = 81/132 (61.36%), Postives = 103/132 (78.03%), Query Frame = 0


Query: 1   MEGDNVRVSVDVVVNGDCSVPIPEKEGTSMLSQEVGSQLLWPRDLVIVQKGKRQSMFSQP 60
           M+GDNV+VSVD+V +G+C VP+P +EG +MLSQE GSQLLWPR LVI    K +S++ Q 
Sbjct: 85  MDGDNVKVSVDMVTDGNCFVPVPTREGRTMLSQEFGSQLLWPRHLVIPLDEKMKSVY-QA 144

Query: 61  DLKVGPLT-PIQSSPVALRCLLRELEHIGSKIQMTVPIEVFGVQRKCCIFLEVLQEFCHM 120
           D ++  LT   + +PV LR LL EL++IGSKIQ+ VP +VF  +RKCCIFLE LQEFC M
Sbjct: 145 DPRLPSLTLNTKRAPVTLRLLLWELDYIGSKIQIHVPAKVFRYERKCCIFLEALQEFCQM 204

Query: 121 QPISTQCIDAYM 132
           QPISTQCI+A+M
Sbjct: 205 QPISTQCINAFM 215

The following BLAST results are available for this feature:

BLAST of PI0006439.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0006439.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T2U8	1.4e-37	64.39	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7SM56	1.8e-37	63.64	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7TVG6	2.4e-37	63.64	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7V975	7.6e-36	61.36	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1290G00360 P...	[more]
A0A5A7TLE7	2.2e-35	61.36	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of PI0006439.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035941.1	2.9e-37	64.39	uncharacterized protein E6C27_scaffold56G001300 [Cucumis melo var. makuwa]	[more]
KAA0031708.1	3.7e-37	63.64	hypothetical protein E6C27_scaffold139G004940 [Cucumis melo var. makuwa]	[more]
KAA0046954.1	4.9e-37	63.64	uncharacterized protein E6C27_scaffold230G001320 [Cucumis melo var. makuwa]	[more]
KAA0063750.1	1.6e-35	61.36	transposase [Cucumis melo var. makuwa]	[more]
KAA0042401.1	4.6e-35	61.36	uncharacterized protein E6C27_scaffold943G00100 [Cucumis melo var. makuwa]	[more]

BLAST of PI0006439.1 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0006439	PI0006439	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0006439.1-exon	PI0006439.1-exon-chr12:16601894..16602049	exon
PI0006439.1-exon	PI0006439.1-exon-chr12:16602142..16602384	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0006439.1-cds	PI0006439.1-cds-chr12:16601894..16602049	CDS
PI0006439.1-cds	PI0006439.1-cds-chr12:16602142..16602384	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0006439.1	PI0006439.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity