PI0006344.1 (mRNA) Melon (PI 482460) v1

Overview
NamePI0006344.1
TypemRNA
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr07: 16094117 .. 16095305 (+)
Sequence length387
RNA-Seq ExpressionPI0006344.1
SyntenyPI0006344.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCGGCTAGTCGGGCGCCGCGTTGTCCGTAGATCCGCCGCCAGTCCGCACGAGAAGCCTAGATCTGCCGCCGCCCAGCTCCGCCACAGTCATCCATCGGTTCGTGCCGCCCCTCCTTTTTCTAGCCGATTTGAGCTGTTTTTGGTGAGTTTCGCCTCAGATTTAAACGATTTAGAGCTCTCTTTTGCAGATTTTGTTGGGTTAAAGATTTACGGAGTTAATTTCTGTTTTGTGGGTTGAAGTTTTCGTGGTTTTCGTTGGAGGTGCTGTCGAAGGTTTCGCTTCGGTTCGTTGGGTTTATTTTTGGGCGTTTTGGAGACTTAGCGTTTGTTTCGGCAAGTCGCTTTGGGGATTTAATTCTCCTCTTGTTTGGGGTAAGTATTGTTGAAGTTTTATGTGAAATTGTTGGGTTGAAATAAGAAATTTATTGAATTTTTGGTTACTTTGTTGTTTAGGATTTTTGGTTCGTTGGTTCCTTTTCGGGTTGACTCGGTTAAGGTAAGGGACTTCCTCTACCGGACTAGCTAATTAAAGGTGCCTTATGTGATGATTTGATGATTGAGTGTTTTAAGATTTTAGAGCATTGTTGACTTGACTGGATATGTGAAATGTTGGGAATTTCTAATGACTCGTTACTCTGTTGAACGATTTTAGTTGTGCTTTAGAATAATCAAATTTTGACTGCATTAGACTTTATTACTGGGATTGAATGCTCTGAACTGTTTAGACTGGCATGTTTCATGTGGACTGAGGGTAAACTGTAAGTTTTAGCTATGGGTTGTGTACCTTGCAGTCACAGAGTCCTACGGGACCCTCTTTATTTGTGTTCCCACGGGTTCACTGGACTGATTAGGTGCATCCTTCGGGATCACCAGACTACTTAGGTGTGTCCTTCGAGATCGCCAGACTGTATGATGGACATCCCTCAGGATTCCTAGACTGTATCTAACCGTAGGATACTCCTATAGGAAGTTAATAGTTTTAATCCTTAACAGGACCTGTAGCGGGTCTTTTACTGAGTATCTTATACTCATCCTTTATGTTTAATTTGTTGTAGGCAAAGGTAATCAGCGAGGCAGAGCAGCGAGGGACAAGAAGGATATGTGATGGTCATAGGGGTCGTCGCTTCCGCACATGGGTTATGTTTTTTACTTTTTGGGTTGACCGTCGCGTCTTTAAGTCTTAA

mRNA sequence

ATGGCGCGGCTAGTCGGGCGCCGCGTTGTCCGTAGATCCGCCGCCAGTCCGCACGAGAAGCCTAGATCTGCCGCCGCCCAGCTCCGCCACAGTCATCCATCGGTTCGTGCCGCCCCTCCTTTTTCTAGCCGATTTGAGCTGTTTTTGGTGCTGTCGAAGGTTTCGCTTCGGTTCGTTGGGTTTATTTTTGGGCGTTTTGGAGACTTAGCGTTTGTTTCGGCAAGTCGCTTTGGGGATTTAATTCTCCTCTTGTTTGGGGCAAAGGTAATCAGCGAGGCAGAGCAGCGAGGGACAAGAAGGATATGTGATGGTCATAGGGGTCGTCGCTTCCGCACATGGGTTATGTTTTTTACTTTTTGGGTTGACCGTCGCGTCTTTAAGTCTTAA

Coding sequence (CDS)

ATGGCGCGGCTAGTCGGGCGCCGCGTTGTCCGTAGATCCGCCGCCAGTCCGCACGAGAAGCCTAGATCTGCCGCCGCCCAGCTCCGCCACAGTCATCCATCGGTTCGTGCCGCCCCTCCTTTTTCTAGCCGATTTGAGCTGTTTTTGGTGCTGTCGAAGGTTTCGCTTCGGTTCGTTGGGTTTATTTTTGGGCGTTTTGGAGACTTAGCGTTTGTTTCGGCAAGTCGCTTTGGGGATTTAATTCTCCTCTTGTTTGGGGCAAAGGTAATCAGCGAGGCAGAGCAGCGAGGGACAAGAAGGATATGTGATGGTCATAGGGGTCGTCGCTTCCGCACATGGGTTATGTTTTTTACTTTTTGGGTTGACCGTCGCGTCTTTAAGTCTTAA

Protein sequence

MARLVGRRVVRRSAASPHEKPRSAAAQLRHSHPSVRAAPPFSSRFELFLVLSKVSLRFVGFIFGRFGDLAFVSASRFGDLILLLFGAKVISEAEQRGTRRICDGHRGRRFRTWVMFFTFWVDRRVFKS
Homology
The following BLAST results are available for this feature:
BLAST of PI0006344.1 vs.
Match NameE-valueIdentityDescription
BLAST of PI0006344.1 vs.
Match NameE-valueIdentityDescription
BLAST of PI0006344.1 vs.
Match NameE-valueIdentityDescription
BLAST of PI0006344.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
PI0006344PI0006344gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
PI0006344.1-exonPI0006344.1-exon-chr07:16094117..16094263exon
PI0006344.1-exonPI0006344.1-exon-chr07:16094383..16094493exon
PI0006344.1-exonPI0006344.1-exon-chr07:16095177..16095305exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
PI0006344.1-cdsPI0006344.1-cds-chr07:16094117..16094263CDS
PI0006344.1-cdsPI0006344.1-cds-chr07:16094383..16094493CDS
PI0006344.1-cdsPI0006344.1-cds-chr07:16095177..16095305CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
PI0006344.1PI0006344.1-proteinpolypeptide