PI0006247.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0006247.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	glycine-rich cell wall structural protein 1.8-like
Location	chr06: 29710863 .. 29711531 (-)
Sequence length	669
RNA-Seq Expression	PI0006247.1
Synteny	PI0006247.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATCCTTAGAGCATTGTGCCTTGCCTTTCTTCTCTTTGTAGGGTTAGGTTTAGCTTCGGCTAGTAGAACTCTTCTTGATTATGATCCACGTACACGTCACTATGGTTATGATCGTCCTAGTCCAAGAGTAGGGTATGATCCTGGCCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGCTCTAGTAGAGGACATGGAATTGGAGACTCCGGTCTTGGAGGTTCCGGATACGAAGGTGGTGGAAGACGCAATTATGGATATGGAGATCGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAAGTGTAGGAGGACATGGTGATGGTTATGGTAACAATGGTGGTGGAGGCTACGGAGATCGTTATGGCCCTTCTCTTGGAGGTTCAGGATATGGAAGTGGAGGTAAAGGAAGTGGCAACGGCTATGACGATCGTTCTCGTGGATATGGAGCACGTGACAATGGCTATGGAGATTCACATGGACATGGAGGACGCGACAGTGGATATGGGAGTGGTGGAGGAGTTAGTGGTGGCTATGGTAATGGAGGAGTGCATGGAGGAGAGTATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGATGGTGGATATGCTGTCAAAAACTCCATCTCAAAGGGGAATTGA

mRNA sequence

ATGGCTATCCTTAGAGCATTGTGCCTTGCCTTTCTTCTCTTTGTAGGGTTAGGTTTAGCTTCGGCTAGTAGAACTCTTCTTGATTATGATCCACGTACACGTCACTATGGTTATGATCGTCCTAGTCCAAGAGTAGGGTATGATCCTGGCCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGCTCTAGTAGAGGACATGGAATTGGAGACTCCGGTCTTGGAGGTTCCGGATACGAAGGTGGTGGAAGACGCAATTATGGATATGGAGATCGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAAGTGTAGGAGGACATGGTGATGGTTATGGTAACAATGGTGGTGGAGGCTACGGAGATCGTTATGGCCCTTCTCTTGGAGGTTCAGGATATGGAAGTGGAGGTAAAGGAAGTGGCAACGGCTATGACGATCGTTCTCGTGGATATGGAGCACGTGACAATGGCTATGGAGATTCACATGGACATGGAGGACGCGACAGTGGATATGGGAGTGGTGGAGGAGTTAGTGGTGGCTATGGTAATGGAGGAGTGCATGGAGGAGAGTATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGATGGTGGATATGCTGTCAAAAACTCCATCTCAAAGGGGAATTGA

Coding sequence (CDS)

ATGGCTATCCTTAGAGCATTGTGCCTTGCCTTTCTTCTCTTTGTAGGGTTAGGTTTAGCTTCGGCTAGTAGAACTCTTCTTGATTATGATCCACGTACACGTCACTATGGTTATGATCGTCCTAGTCCAAGAGTAGGGTATGATCCTGGCCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGCTCTAGTAGAGGACATGGAATTGGAGACTCCGGTCTTGGAGGTTCCGGATACGAAGGTGGTGGAAGACGCAATTATGGATATGGAGATCGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAAGTGTAGGAGGACATGGTGATGGTTATGGTAACAATGGTGGTGGAGGCTACGGAGATCGTTATGGCCCTTCTCTTGGAGGTTCAGGATATGGAAGTGGAGGTAAAGGAAGTGGCAACGGCTATGACGATCGTTCTCGTGGATATGGAGCACGTGACAATGGCTATGGAGATTCACATGGACATGGAGGACGCGACAGTGGATATGGGAGTGGTGGAGGAGTTAGTGGTGGCTATGGTAATGGAGGAGTGCATGGAGGAGAGTATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGATGGTGGATATGCTGTCAAAAACTCCATCTCAAAGGGGAATTGA

Protein sequence

MAILRALCLAFLLFVGLGLASASRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDSGLGGSGYEGGGRRNYGYGDRNDDRGVGYGNGGGYGSVGGHGDGYGNNGGGGYGDRYGPSLGGSGYGSGGKGSGNGYDDRSRGYGARDNGYGDSHGHGGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN

Homology

[Close]

BLAST of PI0006247.1 vs. ExPASy Swiss-Prot
Match: P10496 (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 8.6e-05
Identity = 71/161 (44.10%), Postives = 75/161 (46.58%), Query Frame = 0


Query: 61  GGSSSRGHGIGDSGLGGSGYEGGGRRNYGYGDRNDDRGVGYGNGGGYGSVGGHGDGYGNN 120
           GG    G G G  G  G GY   G    GYG      G G G+GGGYG+ G HG GYG  
Sbjct: 312 GGEHGGGGGGGQGGGAGGGYAAVGEHGGGYGG-----GQGGGDGGGYGTGGEHGGGYGGG 371

Query: 121 GGGGYGDRYGP-----------SLGGSGYGSGGKGSGNGYDDRSRGYGARDNGYGDSHGH 180
            GGG G  YG              GG GYG+GG     GY     G G    GYGD   H
Sbjct: 372 QGGGAGGGYGTGGEHGGGYGGGQGGGGGYGAGGDHGAAGYGGGEGGGGGSGGGYGDGGAH 431

Query: 181 GGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDG 211
           GG   GYG G G  GGYG GG HGG Y    G G  GG+ G
Sbjct: 432 GG---GYGGGAGGGGGYGAGGAHGGGYGGGGGIG--GGHGG 462

[Close]

BLAST of PI0006247.1 vs. ExPASy Swiss-Prot
Match: P10495 (Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.5e-04
Identity = 71/155 (45.81%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 61  GGSSSRGHGIGDSGLGGSGYEGGGRRNYGYGDRNDDRGVGYGNGGGYGSVGGHGDGYGNN 120
           GG+   G+G G    GG GY GGG    GYG      G G G  GG GS  G+G G G+ 
Sbjct: 100 GGADGGGYGGGAGKGGGEGYGGGGANGGGYGGGGGSGGGGGGGAGGAGS--GYGGGEGSG 159

Query: 121 GGGGYGDRYGPSLGGSGYGSGGKGSGNGYDDRSRGYGARDNGYGDSHGHGG---RDSGYG 180
            GGGYG   G   GG+G G GG GSG  +   + G G    G G   G+GG      G G
Sbjct: 160 AGGGYGGANGGGGGGNG-GGGGGGSGGAHGGGAAG-GGEGAGQGAGGGYGGGAAGGGGRG 219

Query: 181 SGGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGY 213
           SGGG  GGYG GG  G  Y    GSGE GG+ GGY
Sbjct: 220 SGGGGGGGYGGGGARGSGYGGGGGSGEGGGHGGGY 250

[Close]

BLAST of PI0006247.1 vs. ExPASy Swiss-Prot
Match: P0C5C7 (Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=GRP0.9 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.3e-04
Identity = 85/214 (39.72%), Postives = 102/214 (47.66%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVGLGLASASRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60
           MA  + L LA L+ + +G+ +++RTLL                  GY PG          
Sbjct: 1   MATTKHLALAILVLLSIGMTTSARTLL------------------GYGPG--------GG 60

Query: 61  GGSSSRGHGIGDSGLGGSGYEGGGRRNYGYGDRNDDRGV---GYGNGGGYGSVGGHGDGY 120
           GG    G G G  G GGSGY  G     GYG+     G    GYG GGG G  GG G G 
Sbjct: 61  GGGGGGGEG-GGGGYGGSGYGSGS----GYGEGGGSGGAAGGGYGRGGGGGGGGGEGGGS 120

Query: 121 GNNGGGGYGDRYGPSLGGS-GYGSGGKGSGNGYDDRSRGYGARDNGYGDSHGH---GGRD 180
           G+  G G G  YG  +GG+ GYGSGG G G G    + GYG + +GYG  +G    G   
Sbjct: 121 GSGYGSGQGSGYGAGVGGAGGYGSGG-GGGGGQGGGAGGYG-QGSGYGSGYGSGAGGAHG 180

Query: 181 SGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGG 208
            GYGSGGG  GG G GG  G    +  GSG  GG
Sbjct: 181 GGYGSGGGGGGGGGQGGGSGSGSGSGYGSGSGGG 181

[Close]

BLAST of PI0006247.1 vs. ExPASy Swiss-Prot
Match: A3C5A7 (Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRP0.9 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.3e-04
Identity = 85/214 (39.72%), Postives = 102/214 (47.66%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVGLGLASASRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60
           MA  + L LA L+ + +G+ +++RTLL                  GY PG          
Sbjct: 1   MATTKHLALAILVLLSIGMTTSARTLL------------------GYGPG--------GG 60

Query: 61  GGSSSRGHGIGDSGLGGSGYEGGGRRNYGYGDRNDDRGV---GYGNGGGYGSVGGHGDGY 120
           GG    G G G  G GGSGY  G     GYG+     G    GYG GGG G  GG G G 
Sbjct: 61  GGGGGGGEG-GGGGYGGSGYGSGS----GYGEGGGSGGAAGGGYGRGGGGGGGGGEGGGS 120

Query: 121 GNNGGGGYGDRYGPSLGGS-GYGSGGKGSGNGYDDRSRGYGARDNGYGDSHGH---GGRD 180
           G+  G G G  YG  +GG+ GYGSGG G G G    + GYG + +GYG  +G    G   
Sbjct: 121 GSGYGSGQGSGYGAGVGGAGGYGSGG-GGGGGQGGGAGGYG-QGSGYGSGYGSGAGGAHG 180

Query: 181 SGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGG 208
            GYGSGGG  GG G GG  G    +  GSG  GG
Sbjct: 181 GGYGSGGGGGGGGGQGGGSGSGSGSGYGSGSGGG 181

[Close]

BLAST of PI0006247.1 vs. ExPASy TrEMBL
Match: A0A5A7UHU2 (Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001580 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.3e-101
Identity = 213/223 (95.52%), Postives = 216/223 (96.86%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVGLGLASASRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60
           MAILRALCLAFLLFVGLGLASA+RTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 61  GGSSSRGHGIGDSGLGGSGYEGGGRRNYGYGDRNDDRGVGYGNGGGYGSVGGHGDGYGNN 120
           GGSSSRGHGIGDS LGGSGYEGGGRR+YGYGDRND+RGVGYGNGGGYG VGGHGDGYGNN
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGRRDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYGNN 120

Query: 121 GGGGYGDRYGPSLGGSGYGSGGKGSGNGYDDR-SRGYGARDNGYGDSHGHGGRDSGYGSG 180
           GGGGYGDRYGPSLGGSGYGSGGKGS NGYDDR S GYG RDNGYGDSHGH GRDSGYGSG
Sbjct: 121 GGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGSG 180

Query: 181 GGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223
           GGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN
Sbjct: 181 GGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of PI0006247.1 vs. ExPASy TrEMBL
Match: A0A1S3BMC4 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103491115 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.3e-101
Identity = 213/223 (95.52%), Postives = 216/223 (96.86%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVGLGLASASRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60
           MAILRALCLAFLLFVGLGLASA+RTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 61  GGSSSRGHGIGDSGLGGSGYEGGGRRNYGYGDRNDDRGVGYGNGGGYGSVGGHGDGYGNN 120
           GGSSSRGHGIGDS LGGSGYEGGGRR+YGYGDRND+RGVGYGNGGGYG VGGHGDGYGNN
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGRRDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYGNN 120

Query: 121 GGGGYGDRYGPSLGGSGYGSGGKGSGNGYDDR-SRGYGARDNGYGDSHGHGGRDSGYGSG 180
           GGGGYGDRYGPSLGGSGYGSGGKGS NGYDDR S GYG RDNGYGDSHGH GRDSGYGSG
Sbjct: 121 GGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGSG 180

Query: 181 GGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223
           GGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN
Sbjct: 181 GGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of PI0006247.1 vs. ExPASy TrEMBL
Match: A0A0A0L1V3 (Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.9e-95
Identity = 205/223 (91.93%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVGLGLASASRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60
           MAILRALCLAFLLFV LGLASA+RTLLDYDPRT  YGYDRPSPRVGYDPGH DESYD AY
Sbjct: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 60

Query: 61  GGSSSRGHGIGDSGLGGSGYEGGGRRNYGYGDRNDDRGVGYGN-GGGYGSVGGHGDGYGN 120
           GGSSSRGHGIGDS LGGSGYEGGGR +YGYGDR++DRGVGYGN GGGYG VGGHGDGYGN
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGN 120

Query: 121 NGGGGYGDRYGPSLGGSGYGSGGKGSGNGYDDRSRGYGARDNGYGDSHGHGGRDSGYGSG 180
           NGGG YGDRYGPSLGGSGYGSGGKGSGNGYDD SRG GARDN YGDSHGHGGRDSGYGSG
Sbjct: 121 NGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG 180

Query: 181 GGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223
           GGV+GGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN
Sbjct: 181 GGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of PI0006247.1 vs. ExPASy TrEMBL
Match: A0A5A7UEU3 (Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001560 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.9e-79
Identity = 193/293 (65.87%), Postives = 203/293 (69.28%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVGLGLASASRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60
           MAI RALC++FLLFV LGLASA+RTLLDYDPRTR Y YD P+PRVGYDP HRD+SYDNAY
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  GGSSSRGHGIGDSGLGGSG-YEGGGRRNY------------------------------- 120
           GGSS+RG+G+GDS LGGSG YEGGG  +Y                               
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 121 ---------------------------------------GYGDRNDDRGVGYGNGGGYGS 180
                                                  GYG RNDDRGVGYGNGGGYG 
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 181 VGGHGDGYGNNGGGGYGDRYGPSLGGSGYGSGGKGSGNGYDDRSRGYGARDNGYGDSHGH 223
           VGGHGDGYGNN GGGYGDRY PSLGGSGYG+GGKGSGNGYDD SRGYG  DNGYGDSHGH
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

[Close]

BLAST of PI0006247.1 vs. ExPASy TrEMBL
Match: A0A1S3BM26 (glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LOC103491114 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.9e-79
Identity = 193/293 (65.87%), Postives = 203/293 (69.28%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVGLGLASASRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60
           MAI RALC++FLLFV LGLASA+RTLLDYDPRTR Y YD P+PRVGYDP HRD+SYDNAY
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  GGSSSRGHGIGDSGLGGSG-YEGGGRRNY------------------------------- 120
           GGSS+RG+G+GDS LGGSG YEGGG  +Y                               
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 121 ---------------------------------------GYGDRNDDRGVGYGNGGGYGS 180
                                                  GYG RNDDRGVGYGNGGGYG 
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 181 VGGHGDGYGNNGGGGYGDRYGPSLGGSGYGSGGKGSGNGYDDRSRGYGARDNGYGDSHGH 223
           VGGHGDGYGNN GGGYGDRY PSLGGSGYG+GGKGSGNGYDD SRGYG  DNGYGDSHGH
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

[Close]

BLAST of PI0006247.1 vs. NCBI nr
Match: XP_008449165.1 (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KAA0053039.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa] >TYK11494.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa])

HSP 1 Score: 378.3 bits (970), Expect = 4.7e-101
Identity = 213/223 (95.52%), Postives = 216/223 (96.86%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVGLGLASASRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60
           MAILRALCLAFLLFVGLGLASA+RTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 61  GGSSSRGHGIGDSGLGGSGYEGGGRRNYGYGDRNDDRGVGYGNGGGYGSVGGHGDGYGNN 120
           GGSSSRGHGIGDS LGGSGYEGGGRR+YGYGDRND+RGVGYGNGGGYG VGGHGDGYGNN
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGRRDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYGNN 120

Query: 121 GGGGYGDRYGPSLGGSGYGSGGKGSGNGYDDR-SRGYGARDNGYGDSHGHGGRDSGYGSG 180
           GGGGYGDRYGPSLGGSGYGSGGKGS NGYDDR S GYG RDNGYGDSHGH GRDSGYGSG
Sbjct: 121 GGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGSG 180

Query: 181 GGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223
           GGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN
Sbjct: 181 GGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of PI0006247.1 vs. NCBI nr
Match: KAE8650024.1 (hypothetical protein Csa_011560 [Cucumis sativus])

HSP 1 Score: 358.6 bits (919), Expect = 3.9e-95
Identity = 205/223 (91.93%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVGLGLASASRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60
           MAILRALCLAFLLFV LGLASA+RTLLDYDPRT  YGYDRPSPRVGYDPGH DESYD AY
Sbjct: 16  MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 75

Query: 61  GGSSSRGHGIGDSGLGGSGYEGGGRRNYGYGDRNDDRGVGYGN-GGGYGSVGGHGDGYGN 120
           GGSSSRGHGIGDS LGGSGYEGGGR +YGYGDR++DRGVGYGN GGGYG VGGHGDGYGN
Sbjct: 76  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGN 135

Query: 121 NGGGGYGDRYGPSLGGSGYGSGGKGSGNGYDDRSRGYGARDNGYGDSHGHGGRDSGYGSG 180
           NGGG YGDRYGPSLGGSGYGSGGKGSGNGYDD SRG GARDN YGDSHGHGGRDSGYGSG
Sbjct: 136 NGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG 195

Query: 181 GGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223
           GGV+GGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN
Sbjct: 196 GGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 238

[Close]

BLAST of PI0006247.1 vs. NCBI nr
Match: XP_011652712.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus])

HSP 1 Score: 358.6 bits (919), Expect = 3.9e-95
Identity = 205/223 (91.93%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVGLGLASASRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60
           MAILRALCLAFLLFV LGLASA+RTLLDYDPRT  YGYDRPSPRVGYDPGH DESYD AY
Sbjct: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 60

Query: 61  GGSSSRGHGIGDSGLGGSGYEGGGRRNYGYGDRNDDRGVGYGN-GGGYGSVGGHGDGYGN 120
           GGSSSRGHGIGDS LGGSGYEGGGR +YGYGDR++DRGVGYGN GGGYG VGGHGDGYGN
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGN 120

Query: 121 NGGGGYGDRYGPSLGGSGYGSGGKGSGNGYDDRSRGYGARDNGYGDSHGHGGRDSGYGSG 180
           NGGG YGDRYGPSLGGSGYGSGGKGSGNGYDD SRG GARDN YGDSHGHGGRDSGYGSG
Sbjct: 121 NGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG 180

Query: 181 GGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223
           GGV+GGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN
Sbjct: 181 GGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of PI0006247.1 vs. NCBI nr
Match: KAE8650023.1 (hypothetical protein Csa_011563 [Cucumis sativus])

HSP 1 Score: 311.6 bits (797), Expect = 5.4e-81
Identity = 190/256 (74.22%), Postives = 201/256 (78.52%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVGLGLASASRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60
           MAI + LC+ FLLFVGLGLASA+RTLLDYDPRTR Y YD P+PRVGYDP HRD+SYD+AY
Sbjct: 1   MAIPKVLCIGFLLFVGLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDSAY 60

Query: 61  GGSSSRGHGIGDSGLGGSG-YEGGGRRN-------------------------------- 120
            GSSS+G+G+GDS LGGSG YEGGG R+                                
Sbjct: 61  SGSSSKGYGVGDSALGGSGRYEGGGGRDSGYGGRNDDRGAGYGGRNDDHGAGYGSRNDDH 120

Query: 121 -YGYGDRNDDRGVGYGNGGGYGSVGGHGDGYGNNGGGGYGDRYGPSLGGSGYGSGGKGSG 180
             GYG RNDDRGVGYGNGGGYGSVGGHGDGYGNNGGG YGDRYGPSLGGSGYGSGGKGSG
Sbjct: 121 GAGYGGRNDDRGVGYGNGGGYGSVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSG 180

Query: 181 NGYDDRSRGYGARDNGYGDSHGHGGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEEG 223
           NGYDD SRG GARDN YGDSHGH GRDSGYGSGGGVSGGYGNGGVHGGE+DNSKGSGEEG
Sbjct: 181 NGYDDHSRGNGARDNNYGDSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEG 240

[Close]

BLAST of PI0006247.1 vs. NCBI nr
Match: XP_008449164.1 (PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo] >KAA0053037.1 glycine-rich cell wall structural protein 1.0-like [Cucumis melo var. makuwa] >TYK11492.1 glycine-rich cell wall structural protein 1.0-like [Cucumis melo var. makuwa])

HSP 1 Score: 305.4 bits (781), Expect = 3.9e-79
Identity = 193/293 (65.87%), Postives = 203/293 (69.28%), Query Frame = 0


Query: 1   MAILRALCLAFLLFVGLGLASASRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60
           MAI RALC++FLLFV LGLASA+RTLLDYDPRTR Y YD P+PRVGYDP HRD+SYDNAY
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  GGSSSRGHGIGDSGLGGSG-YEGGGRRNY------------------------------- 120
           GGSS+RG+G+GDS LGGSG YEGGG  +Y                               
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 121 ---------------------------------------GYGDRNDDRGVGYGNGGGYGS 180
                                                  GYG RNDDRGVGYGNGGGYG 
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 181 VGGHGDGYGNNGGGGYGDRYGPSLGGSGYGSGGKGSGNGYDDRSRGYGARDNGYGDSHGH 223
           VGGHGDGYGNN GGGYGDRY PSLGGSGYG+GGKGSGNGYDD SRGYG  DNGYGDSHGH
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

[Close]

BLAST of PI0006247.1 vs. TAIR 10
Match: AT2G36120.1 (Glycine-rich protein family )

HSP 1 Score: 42.7 bits (99), Expect = 4.4e-04
Identity = 91/235 (38.72%), Postives = 102/235 (43.40%), Query Frame = 0


Query: 9   LAFLLF-VGLGLASASRTLL---DYDPRTRHYGYDRP-----SPRVGYDPGHRDESYDNA 68
           L FL F +GLGL SA R LL   + +     YG +          +G  PG        +
Sbjct: 7   LFFLCFLIGLGLCSARRALLSSSESEAEVAAYGVNSGLSAGLGVGIGGGPGGGSGYGGGS 66

Query: 69  YGGSSSRGHGIGDSGLGGSGYEGGGRRNYGYGDRNDDRGVGYGNGGGYGSVGGHGDGYGN 128
             G  + GHG G  G GG G  GGG    G G      G G G GGG G  GG   G+G 
Sbjct: 67  GEGGGAGGHGEGHIGGGGGGGHGGGAGGGGGGGPGGGYGGGSGEGGGAGYGGGEAGGHGG 126

Query: 129 NGGGGYGDRYGPSLG--GSGYGSG-GKGSGNGYDDRSR------GYGARDNGYGDSHGHG 188
            GGGG G   G   G  G GYG G G G+G GY           G G    G G   G G
Sbjct: 127 GGGGGAGGGGGGGGGAHGGGYGGGQGAGAGGGYGGGGAGGHGGGGGGGNGGGGGGGSGEG 186

Query: 189 G-RDSGYGSGGGVSGGYGNG---GVHGGEYDNSKGSGEEGGYDGGYAVKNSISKG 222
           G    GYG+GGG   GYG G   G HGG      GSG  GG  GGYA  +    G
Sbjct: 187 GAHGGGYGAGGGAGEGYGGGAGAGGHGGGGGGGGGSGGGGGGGGGYAAASGYGHG 241

The following BLAST results are available for this feature:

BLAST of PI0006247.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10496	8.6e-05	44.10	Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2...	[more]
P10495	1.5e-04	45.81	Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2...	[more]
P0C5C7	7.3e-04	39.72	Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. indica OX=399...	[more]
A3C5A7	7.3e-04	39.72	Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. japonica OX=3...	[more]

BLAST of PI0006247.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHU2	2.3e-101	95.52	Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BMC4	2.3e-101	95.52	glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0L1V3	1.9e-95	91.93	Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1	[more]
A0A5A7UEU3	1.9e-79	65.87	Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BM26	1.9e-79	65.87	glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of PI0006247.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449165.1	4.7e-101	95.52	PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KA...	[more]
KAE8650024.1	3.9e-95	91.93	hypothetical protein Csa_011560 [Cucumis sativus]	[more]
XP_011652712.1	3.9e-95	91.93	glycine-rich cell wall structural protein 2 [Cucumis sativus]	[more]
KAE8650023.1	5.4e-81	74.22	hypothetical protein Csa_011563 [Cucumis sativus]	[more]
XP_008449164.1	3.9e-79	65.87	PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo] >KA...	[more]

BLAST of PI0006247.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36120.1	4.4e-04	38.72	Glycine-rich protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 4..20 score: 35.29 coord: 179..197 score: 36.84 coord: 111..126 score: 41.41 coord: 138..148 score: 55.68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..82

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0006247	PI0006247	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0006247.1-exon	PI0006247.1-exon-chr06:29710863..29711531	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0006247.1-cds	PI0006247.1-cds-chr06:29710863..29711531	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0006247.1	PI0006247.1-protein	polypeptide