PI0005647.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0005647.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	B-box zinc finger family protein
Location	chr01: 5816443 .. 5817881 (-)
Sequence length	1220
RNA-Seq Expression	PI0005647.1
Synteny	PI0005647.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATGGTCGATTTTTCTAGAGCTTTTCTTAAAATGTCAGAATAATAACAATTAAAAGAAAAGAGCTTCCAATCTTAGCTGTTGTCTTGTCCAGTAATGGCGATGAGCCCATAATTCTTTGTCTCCATCTTCCCCCAGTGCTTTAAATTTCACCTTTCTTTCAATCCTTCTCCTCTGAAACTCTAAATTCAGATTCGATTCGATTCTAGATTTTTATTTTTGTTTTTATTTTTATTTTTATTTTTATTATTCATGAAGATCCGTTGCGATGTTTGTGATCAAACTGAGGCCTCTGTATTTTGTTATGCTGATGAAGCTGCTCTTTGCCATGCCTGTGATCTCCATGTTCATCGTGCTAATAAGCTCGCTGGTAAACACTCTCGATTCTCTTTACTTCAACCCATCAAAAAGGATTCTCCTCCTTGCGATATCTGTCAGGTAATTTTGTGCTTCTTCTAATTTCTGCGTTTTTCTACCAAATTAATGTCTGATTTTTGGAGAGTGATCATCTCAGAAGAACTGAAATTGATTTTTGATTTTTGATTTTTGATTTTCAGGAACGGAGAGCGCTTGTATTCTGTCAACAAGATAGGGCAATTCTTTGCAGAGAATGCGACATTTCGATTCACGAAACAAATGAACATACACAAAAGCACAATCGGTTTCTTCTAACAGGTGTGAAGCTTTCTTCAACTTGTTTTTCGTATCAAACATCTTCATCCTCCAATGGCTGTGATATCGATGCCGCCATGGATGTTAAAACTGGAAGCTCCAACGCTTGCAGCAAAAGACCTAAAATGGCGGCAAAAGATCAACAAATCTCAAGTTCACATTCCGCTGAAAAAGCTACTCCTCCATCGACAAGCAATTATCTGGTCGATCAAGACGGTCAAGCATTAAGCGACGGCGGTTCGTTCTCGACGAGCAGCATATCGGAGTATTTGGAGACATTACCGGGATGGTGTGTGGAGGAGTTTCTAGATCCTTCCGCCGCCGCTGCTGCTGCCAATCGTTTCTGTAAGGTTTGCAGTACATTGCCTGAGTGTTAAGAGTAATTTTGAAACACTTCTTCTTCTTCCTCCTCTAATAATGGAGTTGATTTGTGTTATATTTACAGATTAATAATGGTGAAATTTTGGGATTTTGGAATCGAAATCTGGAAAGGGAAGAAGAATCAGAAAGGTATGTGAAGAAGATGAGTTGGGAAATTTTAGGTAAAAATTGTGAGATTATTAGTAGAAAATGTTGGGATGGAGTTGAAATCTCCATGAAAAGTTGTAAAGATGAAAAAATAGATCAAGAACAAACACAAACTAACTTTTTATTTTTATTTTTTTGTTTGTTGTTGATGAGATTTGCATATTAATTTTTACCTCAACCCATCACTCACTCTCTTTGTATTTTTGCCATTTCCTTTCCTCTTTTTTTTTTTTTTTTTAT

mRNA sequence

CGATGGTCGATTTTTCTAGAGCTTTTCTTAAAATGTCAGAATAATAACAATTAAAAGAAAAGAGCTTCCAATCTTAGCTGTTGTCTTGTCCAGTAATGGCGATGAGCCCATAATTCTTTGTCTCCATCTTCCCCCAGTGCTTTAAATTTCACCTTTCTTTCAATCCTTCTCCTCTGAAACTCTAAATTCAGATTCGATTCGATTCTAGATTTTTATTTTTGTTTTTATTTTTATTTTTATTTTTATTATTCATGAAGATCCGTTGCGATGTTTGTGATCAAACTGAGGCCTCTGTATTTTGTTATGCTGATGAAGCTGCTCTTTGCCATGCCTGTGATCTCCATGTTCATCGTGCTAATAAGCTCGCTGGTAAACACTCTCGATTCTCTTTACTTCAACCCATCAAAAAGGATTCTCCTCCTTGCGATATCTGTCAGGAACGGAGAGCGCTTGTATTCTGTCAACAAGATAGGGCAATTCTTTGCAGAGAATGCGACATTTCGATTCACGAAACAAATGAACATACACAAAAGCACAATCGGTTTCTTCTAACAGGTGTGAAGCTTTCTTCAACTTGTTTTTCGTATCAAACATCTTCATCCTCCAATGGCTGTGATATCGATGCCGCCATGGATGTTAAAACTGGAAGCTCCAACGCTTGCAGCAAAAGACCTAAAATGGCGGCAAAAGATCAACAAATCTCAAGTTCACATTCCGCTGAAAAAGCTACTCCTCCATCGACAAGCAATTATCTGGTCGATCAAGACGGTCAAGCATTAAGCGACGGCGGTTCGTTCTCGACGAGCAGCATATCGGAGTATTTGGAGACATTACCGGGATGGTGTGTGGAGGAGTTTCTAGATCCTTCCGCCGCCGCTGCTGCTGCCAATCGTTTCTATTAATAATGGTGAAATTTTGGGATTTTGGAATCGAAATCTGGAAAGGGAAGAAGAATCAGAAAGGTATGTGAAGAAGATGAGTTGGGAAATTTTAGGTAAAAATTGTGAGATTATTAGTAGAAAATGTTGGGATGGAGTTGAAATCTCCATGAAAAGTTGTAAAGATGAAAAAATAGATCAAGAACAAACACAAACTAACTTTTTATTTTTATTTTTTTGTTTGTTGTTGATGAGATTTGCATATTAATTTTTACCTCAACCCATCACTCACTCTCTTTGTATTTTTGCCATTTCCTTTCCTCTTTTTTTTTTTTTTTTTAT

Coding sequence (CDS)

ATGAAGATCCGTTGCGATGTTTGTGATCAAACTGAGGCCTCTGTATTTTGTTATGCTGATGAAGCTGCTCTTTGCCATGCCTGTGATCTCCATGTTCATCGTGCTAATAAGCTCGCTGGTAAACACTCTCGATTCTCTTTACTTCAACCCATCAAAAAGGATTCTCCTCCTTGCGATATCTGTCAGGAACGGAGAGCGCTTGTATTCTGTCAACAAGATAGGGCAATTCTTTGCAGAGAATGCGACATTTCGATTCACGAAACAAATGAACATACACAAAAGCACAATCGGTTTCTTCTAACAGGTGTGAAGCTTTCTTCAACTTGTTTTTCGTATCAAACATCTTCATCCTCCAATGGCTGTGATATCGATGCCGCCATGGATGTTAAAACTGGAAGCTCCAACGCTTGCAGCAAAAGACCTAAAATGGCGGCAAAAGATCAACAAATCTCAAGTTCACATTCCGCTGAAAAAGCTACTCCTCCATCGACAAGCAATTATCTGGTCGATCAAGACGGTCAAGCATTAAGCGACGGCGGTTCGTTCTCGACGAGCAGCATATCGGAGTATTTGGAGACATTACCGGGATGGTGTGTGGAGGAGTTTCTAGATCCTTCCGCCGCCGCTGCTGCTGCCAATCGTTTCTATTAA

Protein sequence

MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDICQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNGCDIDAAMDVKTGSSNACSKRPKMAAKDQQISSSHSAEKATPPSTSNYLVDQDGQALSDGGSFSTSSISEYLETLPGWCVEEFLDPSAAAAAANRFY

Homology

[Close]

BLAST of PI0005647.1 vs. ExPASy Swiss-Prot
Match: Q0IGM7 (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 8.2e-53
Identity = 122/217 (56.22%), Postives = 148/217 (68.20%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKI C VCD+ EASVFC ADEAALC+ CD HVH ANKLAGKH RFSL  P  KD+P CDI
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120
           C ERRAL+FCQ+DRAILCRECDI IH+ NEHT+KHNRFLLTGVK+S++  +Y  +S+SN 
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS 120

Query: 121 CDIDAAMDVKTGSSNACSKRPKMAAKDQQISSSHSAEKATPPSTSNYLVDQDGQALSDGG 180
               A    KT   +  S+ P  A+ +   SSS     +T  S   Y ++++   +SD G
Sbjct: 121 A--AAFGRAKTRPKSVSSEVPSSASNEVFTSSS-----STTTSNCYYGIEENYHHVSDSG 180

Query: 181 SFS--TSSISEYL-ETLPGWCVEEFLD-PSAAAAAAN 214
           S S  T SISEYL ETLPGW VE+ L+ PS  +   N
Sbjct: 181 SGSGCTGSISEYLMETLPGWRVEDLLEHPSCVSYEDN 210

[Close]

BLAST of PI0005647.1 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.7e-47
Identity = 114/212 (53.77%), Postives = 140/212 (66.04%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKD--SPPC 60
           MKIRCDVCD+ EASVFC ADEA+LC  CD  VH ANKLA KH RFSLL P   +  SP C
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DICQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQ---TS 120
           DICQ+++AL+FCQQDRAILC++CD SIH  NEHT+KH+RFLLTGVKLS+T   Y+    S
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 SSSNGCDIDAAMDVKTGSSNACSKRPKMAAKDQQISSSHSAEKATPPSTSNYLVDQDGQA 180
           SSS+  + D ++   + S+    K+P        +S+   + K  P S  N      G  
Sbjct: 121 SSSSSSNQDFSVPGSSISNPPPLKKP--------LSAPPQSNKIQPFSKIN------GGD 180

Query: 181 LSDGGSFSTSSISEYL-ETLPGWCVEEFLDPS 207
            S     STS+ISEYL +TLPGW VE+FLD S
Sbjct: 181 ASVNQWGSTSTISEYLMDTLPGWHVEDFLDSS 198

[Close]

BLAST of PI0005647.1 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 5.7e-30
Identity = 81/201 (40.30%), Postives = 105/201 (52.24%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKI+C+VC+  EA+V C ADEAALC ACD  +H ANKLAGKH R   L       P CDI
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVP-LSASASSIPKCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120
           CQE     FC QDRA+LCR+CD++IH  N H   H RFLLTG+K+         S+ S+ 
Sbjct: 61  CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSP 120

Query: 121 CDIDAAMDVKTGSSNACSKRPKMAAKDQQISSSHSAEKATPPSTSNYLVDQDGQALSDGG 180
            + D  M+ K     +  +  KMA            ++   P T   + DQ    L    
Sbjct: 121 TNDDKTMETKP-FVQSIPEPQKMAFDHHHHQQQQEQQEGVIPGTK--VNDQTSTKLPLVS 180

Query: 181 SFSTSSISEYLETLPGWCVEE 202
           S ST+       ++P W +EE
Sbjct: 181 SGSTTG------SIPQWQIEE 191

[Close]

BLAST of PI0005647.1 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.7e-29
Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKI+CDVC++  A+V C ADEAALC  CD+ +H ANKLA KH R   L  +    P CDI
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLH-LNSLSTKFPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSST 109
           CQE+ A +FC +DRA+LCR+CD SIH  N  +  H RFL TG+K++ T
Sbjct: 61  CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALT 107

[Close]

BLAST of PI0005647.1 vs. ExPASy Swiss-Prot
Match: Q9SID1 (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.6e-27
Identity = 58/122 (47.54%), Postives = 77/122 (63.11%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKI+CDVC++  A++ C ADEAALC  CD+ VH ANKLA KH R   L  +    PPCDI
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRL-FLDSLSTKFPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120
           C E+ A +FC +DRA+LCR+CD + H  N  +  H RFL TG++++ +  S       N 
Sbjct: 61  CLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNH 120

Query: 121 CD 123
            D
Sbjct: 121 FD 121

[Close]

BLAST of PI0005647.1 vs. ExPASy TrEMBL
Match: A0A1S3BIV2 (B-box zinc finger protein 20-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490354 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.3e-114
Identity = 213/220 (96.82%), Postives = 215/220 (97.73%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI
Sbjct: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120

Query: 121 CDIDAAMDVKTGSSNA-CSKRPKMAAKDQQISSSHSAEKATPPSTSNYLVDQDGQALSDG 180
           CDIDA MDVKTGSSNA CSKRPKMAAKDQQIS+SHSAEKATPPSTSN+LVDQDGQALSDG
Sbjct: 121 CDIDAPMDVKTGSSNASCSKRPKMAAKDQQISTSHSAEKATPPSTSNHLVDQDGQALSDG 180

Query: 181 GSFSTSSISEYLETLPGWCVEEFLDPS---AAAAAANRFY 217
           GSFSTSSISEYLETLPGWCVEEFLDPS   AAAAAANRFY
Sbjct: 181 GSFSTSSISEYLETLPGWCVEEFLDPSAAAAAAAAANRFY 220

[Close]

BLAST of PI0005647.1 vs. ExPASy TrEMBL
Match: A0A1S3BI96 (B-box zinc finger protein 20-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490354 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.7e-114
Identity = 212/219 (96.80%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI
Sbjct: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120

Query: 121 CDIDAAMDVKTGSSNA-CSKRPKMAAKDQQISSSHSAEKATPPSTSNYLVDQDGQALSDG 180
           CDIDA MDVKTGSSNA CSKRPKMAAKDQQIS+SHSAEKATPPSTSN+LVDQDGQALSDG
Sbjct: 121 CDIDAPMDVKTGSSNASCSKRPKMAAKDQQISTSHSAEKATPPSTSNHLVDQDGQALSDG 180

Query: 181 GSFSTSSISEYLETLPGWCVEEFLDPS---AAAAAANRF 216
           GSFSTSSISEYLETLPGWCVEEFLDPS   AAAAAANRF
Sbjct: 181 GSFSTSSISEYLETLPGWCVEEFLDPSAAAAAAAAANRF 219

[Close]

BLAST of PI0005647.1 vs. ExPASy TrEMBL
Match: A0A0A0K4F8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004690 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.5e-113
Identity = 214/222 (96.40%), Postives = 214/222 (96.40%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI
Sbjct: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSN 
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNA 120

Query: 121 CDIDAAMDVKTGSSNACSKRPKMAAKDQQISS-SHSAEKATPPSTS-NYLVDQDGQALSD 180
           CDIDAAMDVKTGSSNACSKRPKMA KDQQISS SHSAEKATPPSTS NYLVDQDGQALSD
Sbjct: 121 CDIDAAMDVKTGSSNACSKRPKMAPKDQQISSTSHSAEKATPPSTSNNYLVDQDGQALSD 180

Query: 181 GGSFSTSSISEYLETLPGWCVEEFLDPS----AAAAAANRFY 217
           GGSFSTSSISEYLETLPGWCVEEFLDPS    AAAAAANRFY
Sbjct: 181 GGSFSTSSISEYLETLPGWCVEEFLDPSAAAAAAAAAANRFY 222

[Close]

BLAST of PI0005647.1 vs. ExPASy TrEMBL
Match: A0A6J1C1I6 (B-box zinc finger protein 20 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007609 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.7e-90
Identity = 181/216 (83.80%), Postives = 191/216 (88.43%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKIRCDVCD+ EA+VFC ADEAALCH CDL VH+ANKLAGKHSRFSLLQPI  +SP CDI
Sbjct: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIHE NEHTQKH+RFLLTGVKLS TCFSYQTSSSS+G
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120

Query: 121 CDIDAAMDVKTGSSNACSKRPKMAAKDQQISSSHSAEKATPPSTSNYLVDQDGQALSDGG 180
           C  DA MDVKTGSS+ACSKRPK A K  +ISSSHSAEKA  PSTSNY   +DGQA SDGG
Sbjct: 121 C--DAGMDVKTGSSHACSKRPKTATK--EISSSHSAEKAA-PSTSNYKA-EDGQA-SDGG 180

Query: 181 SFSTSSISEYLETLPGWCVEEFLDPSAAAAAANRFY 217
           S STSSISEYLETLPGWCVEEFLDPS  AAAANRF+
Sbjct: 181 SLSTSSISEYLETLPGWCVEEFLDPS--AAAANRFF 207

[Close]

BLAST of PI0005647.1 vs. ExPASy TrEMBL
Match: A0A6J1C1T9 (B-box zinc finger protein 20 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007609 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.9e-89
Identity = 181/215 (84.19%), Postives = 190/215 (88.37%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKIRCDVCD+ EA+VFC ADEAALCH CDL VH+ANKLAGKHSRFSLLQPI  +SP CDI
Sbjct: 1   MKIRCDVCDKAEAAVFCSADEAALCHGCDLQVHQANKLAGKHSRFSLLQPIVTESPICDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIHE NEHTQKH+RFLLTGVKLS TCFSYQTSSSS+G
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSPTCFSYQTSSSSDG 120

Query: 121 CDIDAAMDVKTGSSNACSKRPKMAAKDQQISSSHSAEKATPPSTSNYLVDQDGQALSDGG 180
           C  DA MDVKTGSS+ACSKRPK A K  +ISSSHSAEKA  PSTSNY   +DGQA SDGG
Sbjct: 121 C--DAGMDVKTGSSHACSKRPKTATK--EISSSHSAEKAA-PSTSNYKA-EDGQA-SDGG 180

Query: 181 SFSTSSISEYLETLPGWCVEEFLDPSAAAAAANRF 216
           S STSSISEYLETLPGWCVEEFLDPS  AAAANRF
Sbjct: 181 SLSTSSISEYLETLPGWCVEEFLDPS--AAAANRF 206

[Close]

BLAST of PI0005647.1 vs. NCBI nr
Match: XP_008448066.1 (PREDICTED: B-box zinc finger protein 20-like isoform X2 [Cucumis melo])

HSP 1 Score: 422.2 bits (1084), Expect = 2.8e-114
Identity = 213/220 (96.82%), Postives = 215/220 (97.73%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI
Sbjct: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120

Query: 121 CDIDAAMDVKTGSSNA-CSKRPKMAAKDQQISSSHSAEKATPPSTSNYLVDQDGQALSDG 180
           CDIDA MDVKTGSSNA CSKRPKMAAKDQQIS+SHSAEKATPPSTSN+LVDQDGQALSDG
Sbjct: 121 CDIDAPMDVKTGSSNASCSKRPKMAAKDQQISTSHSAEKATPPSTSNHLVDQDGQALSDG 180

Query: 181 GSFSTSSISEYLETLPGWCVEEFLDPS---AAAAAANRFY 217
           GSFSTSSISEYLETLPGWCVEEFLDPS   AAAAAANRFY
Sbjct: 181 GSFSTSSISEYLETLPGWCVEEFLDPSAAAAAAAAANRFY 220

[Close]

BLAST of PI0005647.1 vs. NCBI nr
Match: XP_008448065.1 (PREDICTED: B-box zinc finger protein 20-like isoform X1 [Cucumis melo])

HSP 1 Score: 419.5 bits (1077), Expect = 1.8e-113
Identity = 212/219 (96.80%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI
Sbjct: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120

Query: 121 CDIDAAMDVKTGSSNA-CSKRPKMAAKDQQISSSHSAEKATPPSTSNYLVDQDGQALSDG 180
           CDIDA MDVKTGSSNA CSKRPKMAAKDQQIS+SHSAEKATPPSTSN+LVDQDGQALSDG
Sbjct: 121 CDIDAPMDVKTGSSNASCSKRPKMAAKDQQISTSHSAEKATPPSTSNHLVDQDGQALSDG 180

Query: 181 GSFSTSSISEYLETLPGWCVEEFLDPS---AAAAAANRF 216
           GSFSTSSISEYLETLPGWCVEEFLDPS   AAAAAANRF
Sbjct: 181 GSFSTSSISEYLETLPGWCVEEFLDPSAAAAAAAAANRF 219

[Close]

BLAST of PI0005647.1 vs. NCBI nr
Match: XP_004148534.1 (B-box zinc finger protein 20 isoform X3 [Cucumis sativus])

HSP 1 Score: 417.9 bits (1073), Expect = 5.2e-113
Identity = 214/222 (96.40%), Postives = 214/222 (96.40%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI
Sbjct: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSN 
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNA 120

Query: 121 CDIDAAMDVKTGSSNACSKRPKMAAKDQQISS-SHSAEKATPPSTS-NYLVDQDGQALSD 180
           CDIDAAMDVKTGSSNACSKRPKMA KDQQISS SHSAEKATPPSTS NYLVDQDGQALSD
Sbjct: 121 CDIDAAMDVKTGSSNACSKRPKMAPKDQQISSTSHSAEKATPPSTSNNYLVDQDGQALSD 180

Query: 181 GGSFSTSSISEYLETLPGWCVEEFLDPS----AAAAAANRFY 217
           GGSFSTSSISEYLETLPGWCVEEFLDPS    AAAAAANRFY
Sbjct: 181 GGSFSTSSISEYLETLPGWCVEEFLDPSAAAAAAAAAANRFY 222

[Close]

BLAST of PI0005647.1 vs. NCBI nr
Match: XP_031745265.1 (B-box zinc finger protein 20 isoform X1 [Cucumis sativus] >KAE8645647.1 hypothetical protein Csa_020377 [Cucumis sativus])

HSP 1 Score: 415.2 bits (1066), Expect = 3.4e-112
Identity = 213/221 (96.38%), Postives = 213/221 (96.38%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI
Sbjct: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSN 
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNA 120

Query: 121 CDIDAAMDVKTGSSNACSKRPKMAAKDQQISS-SHSAEKATPPSTS-NYLVDQDGQALSD 180
           CDIDAAMDVKTGSSNACSKRPKMA KDQQISS SHSAEKATPPSTS NYLVDQDGQALSD
Sbjct: 121 CDIDAAMDVKTGSSNACSKRPKMAPKDQQISSTSHSAEKATPPSTSNNYLVDQDGQALSD 180

Query: 181 GGSFSTSSISEYLETLPGWCVEEFLDPS----AAAAAANRF 216
           GGSFSTSSISEYLETLPGWCVEEFLDPS    AAAAAANRF
Sbjct: 181 GGSFSTSSISEYLETLPGWCVEEFLDPSAAAAAAAAAANRF 221

[Close]

BLAST of PI0005647.1 vs. NCBI nr
Match: XP_038887851.1 (B-box zinc finger protein 20-like isoform X2 [Benincasa hispida])

HSP 1 Score: 380.2 bits (975), Expect = 1.2e-101
Identity = 198/216 (91.67%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKIRCDVCDQ EASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSP CDI
Sbjct: 1   MKIRCDVCDQAEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120

Query: 121 CDIDAAMDVKTGSSNACSKRPKMAAKDQQISSSHSAEKATPPSTSNYLVDQDGQALSDGG 180
           C  DAAMDVKTGSSNACSKRPKMAA   +ISSSHS EKATPPSTSNY V +DGQ  SDGG
Sbjct: 121 C--DAAMDVKTGSSNACSKRPKMAA--NEISSSHSGEKATPPSTSNYKV-EDGQG-SDGG 180

Query: 181 SFSTSSISEYLETLPGWCVEEFLDPSAAAAAANRFY 217
           SFSTSSISEYLETLPGWCVEEFLDPS   AAANRF+
Sbjct: 181 SFSTSSISEYLETLPGWCVEEFLDPS---AAANRFF 207

[Close]

BLAST of PI0005647.1 vs. TAIR 10
Match: AT4G39070.1 (B-box zinc finger family protein )

HSP 1 Score: 208.4 bits (529), Expect = 5.8e-54
Identity = 122/217 (56.22%), Postives = 148/217 (68.20%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKI C VCD+ EASVFC ADEAALC+ CD HVH ANKLAGKH RFSL  P  KD+P CDI
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120
           C ERRAL+FCQ+DRAILCRECDI IH+ NEHT+KHNRFLLTGVK+S++  +Y  +S+SN 
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS 120

Query: 121 CDIDAAMDVKTGSSNACSKRPKMAAKDQQISSSHSAEKATPPSTSNYLVDQDGQALSDGG 180
               A    KT   +  S+ P  A+ +   SSS     +T  S   Y ++++   +SD G
Sbjct: 121 A--AAFGRAKTRPKSVSSEVPSSASNEVFTSSS-----STTTSNCYYGIEENYHHVSDSG 180

Query: 181 SFS--TSSISEYL-ETLPGWCVEEFLD-PSAAAAAAN 214
           S S  T SISEYL ETLPGW VE+ L+ PS  +   N
Sbjct: 181 SGSGCTGSISEYLMETLPGWRVEDLLEHPSCVSYEDN 210

[Close]

BLAST of PI0005647.1 vs. TAIR 10
Match: AT1G75540.1 (salt tolerance homolog2 )

HSP 1 Score: 188.7 bits (478), Expect = 4.8e-48
Identity = 114/212 (53.77%), Postives = 140/212 (66.04%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKD--SPPC 60
           MKIRCDVCD+ EASVFC ADEA+LC  CD  VH ANKLA KH RFSLL P   +  SP C
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DICQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQ---TS 120
           DICQ+++AL+FCQQDRAILC++CD SIH  NEHT+KH+RFLLTGVKLS+T   Y+    S
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 SSSNGCDIDAAMDVKTGSSNACSKRPKMAAKDQQISSSHSAEKATPPSTSNYLVDQDGQA 180
           SSS+  + D ++   + S+    K+P        +S+   + K  P S  N      G  
Sbjct: 121 SSSSSSNQDFSVPGSSISNPPPLKKP--------LSAPPQSNKIQPFSKIN------GGD 180

Query: 181 LSDGGSFSTSSISEYL-ETLPGWCVEEFLDPS 207
            S     STS+ISEYL +TLPGW VE+FLD S
Sbjct: 181 ASVNQWGSTSTISEYLMDTLPGWHVEDFLDSS 198

[Close]

BLAST of PI0005647.1 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 )

HSP 1 Score: 132.5 bits (332), Expect = 4.1e-31
Identity = 81/201 (40.30%), Postives = 105/201 (52.24%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKI+C+VC+  EA+V C ADEAALC ACD  +H ANKLAGKH R   L       P CDI
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVP-LSASASSIPKCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120
           CQE     FC QDRA+LCR+CD++IH  N H   H RFLLTG+K+         S+ S+ 
Sbjct: 61  CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSP 120

Query: 121 CDIDAAMDVKTGSSNACSKRPKMAAKDQQISSSHSAEKATPPSTSNYLVDQDGQALSDGG 180
            + D  M+ K     +  +  KMA            ++   P T   + DQ    L    
Sbjct: 121 TNDDKTMETKP-FVQSIPEPQKMAFDHHHHQQQQEQQEGVIPGTK--VNDQTSTKLPLVS 180

Query: 181 SFSTSSISEYLETLPGWCVEE 202
           S ST+       ++P W +EE
Sbjct: 181 SGSTTG------SIPQWQIEE 191

[Close]

BLAST of PI0005647.1 vs. TAIR 10
Match: AT1G78600.2 (light-regulated zinc finger protein 1 )

HSP 1 Score: 132.5 bits (332), Expect = 4.1e-31
Identity = 81/201 (40.30%), Postives = 105/201 (52.24%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKI+C+VC+  EA+V C ADEAALC ACD  +H ANKLAGKH R   L       P CDI
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVP-LSASASSIPKCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120
           CQE     FC QDRA+LCR+CD++IH  N H   H RFLLTG+K+         S+ S+ 
Sbjct: 61  CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSP 120

Query: 121 CDIDAAMDVKTGSSNACSKRPKMAAKDQQISSSHSAEKATPPSTSNYLVDQDGQALSDGG 180
            + D  M+ K     +  +  KMA            ++   P T   + DQ    L    
Sbjct: 121 TNDDKTMETKP-FVQSIPEPQKMAFDHHHHQQQQEQQEGVIPGTK--VNDQTSTKLPLVS 180

Query: 181 SFSTSSISEYLETLPGWCVEE 202
           S ST+       ++P W +EE
Sbjct: 181 SGSTTG------SIPQWQIEE 191

[Close]

BLAST of PI0005647.1 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-30
Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60
           MKI+CDVC++  A+V C ADEAALC  CD+ +H ANKLA KH R   L  +    P CDI
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLH-LNSLSTKFPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSST 109
           CQE+ A +FC +DRA+LCR+CD SIH  N  +  H RFL TG+K++ T
Sbjct: 61  CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALT 107

The following BLAST results are available for this feature:

BLAST of PI0005647.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0IGM7	8.2e-53	56.22	B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1	[more]
Q9LQZ7	6.7e-47	53.77	B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1	[more]
Q9SYM2	5.7e-30	40.30	B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2	[more]
Q96288	1.7e-29	54.63	B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1	[more]
Q9SID1	1.6e-27	47.54	B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2	[more]

BLAST of PI0005647.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BIV2	1.3e-114	96.82	B-box zinc finger protein 20-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A1S3BI96	8.7e-114	96.80	B-box zinc finger protein 20-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A0A0K4F8	2.5e-113	96.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004690 PE=4 SV=1	[more]
A0A6J1C1I6	8.7e-90	83.80	B-box zinc finger protein 20 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1C1T9	1.9e-89	84.19	B-box zinc finger protein 20 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of PI0005647.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448066.1	2.8e-114	96.82	PREDICTED: B-box zinc finger protein 20-like isoform X2 [Cucumis melo]	[more]
XP_008448065.1	1.8e-113	96.80	PREDICTED: B-box zinc finger protein 20-like isoform X1 [Cucumis melo]	[more]
XP_004148534.1	5.2e-113	96.40	B-box zinc finger protein 20 isoform X3 [Cucumis sativus]	[more]
XP_031745265.1	3.4e-112	96.38	B-box zinc finger protein 20 isoform X1 [Cucumis sativus] >KAE8645647.1 hypothet...	[more]
XP_038887851.1	1.2e-101	91.67	B-box zinc finger protein 20-like isoform X2 [Benincasa hispida]	[more]

BLAST of PI0005647.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39070.1	5.8e-54	56.22	B-box zinc finger family protein	[more]
AT1G75540.1	4.8e-48	53.77	salt tolerance homolog2	[more]
AT1G78600.1	4.1e-31	40.30	light-regulated zinc finger protein 1	[more]
AT1G78600.2	4.1e-31	40.30	light-regulated zinc finger protein 1	[more]
AT1G06040.2	1.2e-30	54.63	B-box zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 4..47 e-value: 1.6E-7 score: 41.0 coord: 53..100 e-value: 9.0E-13 score: 58.4
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 55..92 e-value: 4.6E-7 score: 29.9 coord: 3..44 e-value: 9.0E-7 score: 28.9
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 53..100 score: 10.139101
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..47 score: 10.011082
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 1..97 e-value: 1.1E-8 score: 37.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..171
None	No IPR available	PANTHER	PTHR31832	B-BOX ZINC FINGER PROTEIN 22	coord: 1..211
None	No IPR available	PANTHER	PTHR31832:SF52	B-BOX ZINC FINGER PROTEIN 20	coord: 1..211
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 5..47 e-value: 4.25944E-13 score: 59.6187
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 57..100 e-value: 6.24331E-15 score: 64.2411

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0005647	PI0005647	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0005647.1-exon	PI0005647.1-exon-chr01:5816443..5816765	exon
PI0005647.1-exon	PI0005647.1-exon-chr01:5816866..5817325	exon
PI0005647.1-exon	PI0005647.1-exon-chr01:5817445..5817881	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0005647.1-three_prime_utr	PI0005647.1-three_prime_utr-chr01:5816443..5816760	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0005647.1-cds	PI0005647.1-cds-chr01:5816761..5816765	CDS
PI0005647.1-cds	PI0005647.1-cds-chr01:5816866..5817325	CDS
PI0005647.1-cds	PI0005647.1-cds-chr01:5817445..5817630	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0005647.1-five_prime_utr	PI0005647.1-five_prime_utr-chr01:5817631..5817881	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0005647.1	PI0005647.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009640	photomorphogenesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding