PI0004045.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0004045.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	auxin-induced protein 15A-like
Location	chr01: 5537546 .. 5537901 (+)
Sequence length	356
RNA-Seq Expression	PI0004045.1
Synteny	PI0004045.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCAACTCTCAAAAGCAATTTTCCAAGTTCTTTTTGGTGCACATTTGTACCATGGGTTTCCGTCTACCTAGAATTGTTACTGCTAAGCCAAGTCTTCAGCGCTCTTCATCAACAGGGAATGGAGCATCTCCAAAGTCTGTCGACGTTCCAAAGGGATACTTTACAGTTTATGTTGGTGAGTTACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACCAGCCATCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATACAATCATCCAATGGGGGGCATCACAATTCCTTGCAGTGAAGATTATTTCCTCGATCTCTCTCAGAGTTTGAAGGACTCATGA

mRNA sequence

ATTTCAACTCTCAAAAGCAATTTTCCAAGTTCTTTTTGGTGCACATTTGTACCATGGGTTTCCGTCTACCTAGAATTGTTACTGCTAAGCCAAGTCTTCAGCGCTCTTCATCAACAGGGAATGGAGCATCTCCAAAGTCTGTCGACGTTCCAAAGGGATACTTTACAGTTTATGTTGGTGAGTTACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACCAGCCATCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATACAATCATCCAATGGGGGGCATCACAATTCCTTGCAGTGAAGATTATTTCCTCGATCTCTCTCAGAGTTTGAAGGACTCATGA

Coding sequence (CDS)

ATGGGTTTCCGTCTACCTAGAATTGTTACTGCTAAGCCAAGTCTTCAGCGCTCTTCATCAACAGGGAATGGAGCATCTCCAAAGTCTGTCGACGTTCCAAAGGGATACTTTACAGTTTATGTTGGTGAGTTACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACCAGCCATCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATACAATCATCCAATGGGGGGCATCACAATTCCTTGCAGTGAAGATTATTTCCTCGATCTCTCTCAGAGTTTGAAGGACTCATGA

Protein sequence

MGFRLPRIVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSLKDS

Homology

[Close]

BLAST of PI0004045.1 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 4.2e-28
Identity = 61/99 (61.62%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 1   MGFRLPRIVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPS 60
           MGFRL       P ++++S   N AS KSV+VPKGY  VYVG+ + +RF+IP+SYLNQPS
Sbjct: 1   MGFRL-------PGIRKTSIAANQASSKSVEVPKGYLVVYVGD-KMRRFLIPVSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSLKD 100
           FQDLL+QAEEEFGY+HPMGG+TIPC ED FL ++  L D
Sbjct: 61  FQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLND 91

[Close]

BLAST of PI0004045.1 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.3e-26
Identity = 60/97 (61.86%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 1  MGFRLPRIVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPS 60
          MGFRL       P ++++S + N AS K+VDV KGY  VYVGE + +RFVIP+SYLN+PS
Sbjct: 1  MGFRL-------PGIRKASFSANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPS 60

Query: 61 FQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSL 98
          FQDLLSQAEEEFGY+HP GG+TIPCSED F  ++  L
Sbjct: 61 FQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFL 89

[Close]

BLAST of PI0004045.1 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.0e-26
Identity = 60/97 (61.86%), Postives = 71/97 (73.20%), Query Frame = 0


Query: 1  MGFRLPRIVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPS 60
          MGFRL       P ++++ S  N AS K +D PKGY  VYVGE   KRFVIP+S+LNQP 
Sbjct: 1  MGFRL-------PGIRKTLSARNEASSKVLDAPKGYLAVYVGE-NMKRFVIPVSHLNQPL 60

Query: 61 FQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSL 98
          FQDLLSQAEEEFGY+HPMGG+TIPCSED F  ++  L
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCL 89

[Close]

BLAST of PI0004045.1 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.4e-25
Identity = 60/97 (61.86%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 1  MGFRLPRIVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPS 60
          MGFRLP I  A                K+ D PKGY  VYVGE + KRFVIP+SYLNQPS
Sbjct: 1  MGFRLPGIRKAS---------------KAADAPKGYLAVYVGE-KLKRFVIPVSYLNQPS 60

Query: 61 FQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSL 98
          FQDLLSQAEEEFGY+HPMGG+TIPCSED F  ++  L
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCL 81

[Close]

BLAST of PI0004045.1 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.5e-25
Identity = 57/99 (57.58%), Postives = 74/99 (74.75%), Query Frame = 0


Query: 1   MGFRLPRIVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPS 60
           MGFR+  IV      +R+S     A+ K VDVPKGY  VYVG+ + +RF IP+SYLN+PS
Sbjct: 1   MGFRIAGIV------RRTSFYTTQAASKRVDVPKGYAAVYVGD-KMRRFTIPVSYLNEPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSLKD 100
           FQ+LLSQAEEEFGY+HPMGG+TIPC E+ FL+++  L +
Sbjct: 61  FQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHLNE 92

[Close]

BLAST of PI0004045.1 vs. ExPASy TrEMBL
Match: A0A6J1GJW5 (auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111454987 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.2e-44
Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MGFRLPRIVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPS 60
           MGFRLPRIV+ K SLQRSSSTGNGASPK+VDVPKGYFTVYVGE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSLKDS 101
           FQDLLSQAEEEFGYNHPMGGITIPCSED FLDL++SL DS
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDNFLDLTRSLNDS 100

[Close]

BLAST of PI0004045.1 vs. ExPASy TrEMBL
Match: A0A6J1GL91 (auxin-induced protein X10A-like OS=Cucurbita moschata OX=3662 GN=LOC111454985 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.5e-44
Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MGFRLPRIVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPS 60
           MGFRLPRIV+ K SLQRSSSTGNGASPK+VDVPKGYFTVYVGE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSLKDS 101
           FQDLLSQAEEEFGYNHPMGGITIPCSED FLDL++SL DS
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDDFLDLTRSLNDS 100

[Close]

BLAST of PI0004045.1 vs. ExPASy TrEMBL
Match: A0A0A0K4J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008980 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.0e-44
Identity = 90/100 (90.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MGFRLPRIVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPS 60
           MGFRLPRIVTAK SLQRSSSTGNGASPK+VDVPKGYF VY+GE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFAVYIGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSLKDS 101
           FQDLLSQAEEEFGYNHPMGGITIPC+E YFLDL++SL DS
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCNEAYFLDLTRSLNDS 100

[Close]

BLAST of PI0004045.1 vs. ExPASy TrEMBL
Match: A0A5A7U7Y6 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001220 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.6e-44
Identity = 88/100 (88.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MGFRLPRIVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPS 60
           MGFRLPRIVTAK SLQRSSSTGNGASPK++DVPKGYF VY+GE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAIDVPKGYFAVYIGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSLKDS 101
           FQDLLSQAEE+FGYNHPMGGITIPCSEDYFLD+++ L DS
Sbjct: 61  FQDLLSQAEEKFGYNHPMGGITIPCSEDYFLDVTERLNDS 100

[Close]

BLAST of PI0004045.1 vs. ExPASy TrEMBL
Match: A0A1S3BIR0 (auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC103490324 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.6e-44
Identity = 88/100 (88.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MGFRLPRIVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPS 60
           MGFRLPRIVTAK SLQRSSSTGNGASPK++DVPKGYF VY+GE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAIDVPKGYFAVYIGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSLKDS 101
           FQDLLSQAEE+FGYNHPMGGITIPCSEDYFLD+++ L DS
Sbjct: 61  FQDLLSQAEEKFGYNHPMGGITIPCSEDYFLDVTERLNDS 100

[Close]

BLAST of PI0004045.1 vs. NCBI nr
Match: XP_038887254.1 (auxin-induced protein 15A-like [Benincasa hispida])

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 92/100 (92.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MGFRLPRIVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPS 60
           MGFRLPRIVTAK SLQRSSSTGNGASPK+VDVPKGYFTVYVGE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSLKDS 101
           FQDLLSQAEEEFGYNHPMGGITIPCSE+ FL+L+QSL DS
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEEIFLNLTQSLNDS 100

[Close]

BLAST of PI0004045.1 vs. NCBI nr
Match: XP_038887900.1 (auxin-induced protein X10A-like [Benincasa hispida])

HSP 1 Score: 189.1 bits (479), Expect = 1.8e-44
Identity = 92/100 (92.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MGFRLPRIVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPS 60
           MGFRLPRIVTAK SLQRSSSTGNGASPK+VDVPKGYFTVYVGE QKKRFVIPLSYLNQPS
Sbjct: 40  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 99

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSLKDS 101
           FQDLLSQAEEEFGYNHPMGGITIPC ED FLDL++SL DS
Sbjct: 100 FQDLLSQAEEEFGYNHPMGGITIPCREDEFLDLTRSLNDS 139

[Close]

BLAST of PI0004045.1 vs. NCBI nr
Match: XP_022952257.1 (auxin-induced protein 15A-like [Cucurbita moschata])

HSP 1 Score: 188.7 bits (478), Expect = 2.4e-44
Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MGFRLPRIVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPS 60
           MGFRLPRIV+ K SLQRSSSTGNGASPK+VDVPKGYFTVYVGE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSLKDS 101
           FQDLLSQAEEEFGYNHPMGGITIPCSED FLDL++SL DS
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDNFLDLTRSLNDS 100

[Close]

BLAST of PI0004045.1 vs. NCBI nr
Match: XP_022952255.1 (auxin-induced protein X10A-like [Cucurbita moschata] >KAG6572085.1 hypothetical protein SDJN03_28813, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188.3 bits (477), Expect = 3.1e-44
Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MGFRLPRIVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPS 60
           MGFRLPRIV+ K SLQRSSSTGNGASPK+VDVPKGYFTVYVGE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSLKDS 101
           FQDLLSQAEEEFGYNHPMGGITIPCSED FLDL++SL DS
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDDFLDLTRSLNDS 100

[Close]

BLAST of PI0004045.1 vs. NCBI nr
Match: XP_011658575.1 (auxin-induced protein 15A [Cucumis sativus] >XP_011658577.2 auxin-induced protein 15A [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 4.1e-44
Identity = 90/100 (90.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MGFRLPRIVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPS 60
           MGFRLPRIVTAK SLQRSSSTGNGASPK+VDVPKGYF VY+GE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFAVYIGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSLKDS 101
           FQDLLSQAEEEFGYNHPMGGITIPC+E YFLDL++SL DS
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCNEAYFLDLTRSLNDS 100

[Close]

BLAST of PI0004045.1 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 122.5 bits (306), Expect = 2.0e-28
Identity = 55/95 (57.89%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 1  MGFRLPRIV-TAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQP 60
          M  R+PR++ ++K  L+++    + +S  S+DVPKGY  VYVGE   KRFV+P+SYL+QP
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLS 95
          SFQDLL +AEEEFG++HPMGG+TIPCSE+ F+DL+
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLA 95

[Close]

BLAST of PI0004045.1 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.0 bits (271), Expect = 2.2e-24
Identity = 50/91 (54.95%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 8  IVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPSFQDLLSQ 67
          ++ AK  L RS+  G+ A       PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS+
Sbjct: 7  LLGAKKILSRSTGAGSAA-------PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSK 66

Query: 68 AEEEFGYNHPMGGITIPCSEDYFLDLSQSLK 99
          +EEEFG++HPMGG+TIPC ED F++++  L+
Sbjct: 67 SEEEFGFDHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of PI0004045.1 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.5 bits (267), Expect = 6.5e-24
Identity = 50/91 (54.95%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 8  IVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPSFQDLLSQ 67
          ++ AK  L RS++ G+ A       PKG+  VYVGE QKKR+++PLSYL+QPSFQ LLS+
Sbjct: 7  LLGAKKILSRSTAAGSAA-------PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSK 66

Query: 68 AEEEFGYNHPMGGITIPCSEDYFLDLSQSLK 99
          +EEEFG+ HPMGG+TIPC ED F++++  L+
Sbjct: 67 SEEEFGFAHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of PI0004045.1 vs. TAIR 10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23
Identity = 57/104 (54.81%), Postives = 71/104 (68.27%), Query Frame = 0


Query: 1   MGFRLPRIVTAKPSLQRSSSTGNG---ASPKSVDVPKGYFTVYVGE-LQKKRFVIPLSYL 60
           MG +L  +  AK  LQRS S       A+  + +VPKG+  VYVGE   +KRFVIP+SYL
Sbjct: 1   MGIQLIGLSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGETYHRKRFVIPISYL 60

Query: 61  NQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLDLSQSLKDS 101
           N P FQ LL+ AEEEFG++HPMGG+TIPC+EDYF  L+  L  S
Sbjct: 61  NHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYFTALASILSGS 104

[Close]

BLAST of PI0004045.1 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.9 bits (263), Expect = 1.9e-23
Identity = 49/91 (53.85%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 8  IVTAKPSLQRSSSTGNGASPKSVDVPKGYFTVYVGELQKKRFVIPLSYLNQPSFQDLLSQ 67
          ++ AK  L RS++  + A       PKG+  VYVGE QKKR+++PLSYLNQPSFQ LLS+
Sbjct: 7  LLGAKKILSRSTAAVSAA-------PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSK 66

Query: 68 AEEEFGYNHPMGGITIPCSEDYFLDLSQSLK 99
          +E+EFG++HPMGG+TIPC ED F++++  L+
Sbjct: 67 SEDEFGFDHPMGGLTIPCHEDTFINVTSRLQ 90

The following BLAST results are available for this feature:

BLAST of PI0004045.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33080	4.2e-28	61.62	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33083	2.3e-26	61.86	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
P32295	4.0e-26	61.86	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
P33081	4.4e-25	61.86	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33079	7.5e-25	57.58	Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of PI0004045.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJW5	1.2e-44	91.00	auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111454987 PE=...	[more]
A0A6J1GL91	1.5e-44	91.00	auxin-induced protein X10A-like OS=Cucurbita moschata OX=3662 GN=LOC111454985 PE...	[more]
A0A0A0K4J0	2.0e-44	90.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008980 PE=3 SV=1	[more]
A0A5A7U7Y6	2.6e-44	88.00	Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BIR0	2.6e-44	88.00	auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC103490324 PE=3 SV=1	[more]

BLAST of PI0004045.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887254.1	1.4e-44	92.00	auxin-induced protein 15A-like [Benincasa hispida]	[more]
XP_038887900.1	1.8e-44	92.00	auxin-induced protein X10A-like [Benincasa hispida]	[more]
XP_022952257.1	2.4e-44	91.00	auxin-induced protein 15A-like [Cucurbita moschata]	[more]
XP_022952255.1	3.1e-44	91.00	auxin-induced protein X10A-like [Cucurbita moschata] >KAG6572085.1 hypothetical ...	[more]
XP_011658575.1	4.1e-44	90.00	auxin-induced protein 15A [Cucumis sativus] >XP_011658577.2 auxin-induced protei...	[more]

BLAST of PI0004045.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	2.0e-28	57.89	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	2.2e-24	54.95	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	6.5e-24	54.95	SAUR-like auxin-responsive protein family	[more]
AT4G34770.1	1.4e-23	54.81	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	1.9e-23	53.85	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 18..94 e-value: 1.5E-24 score: 86.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR31929:SF69	SUBFAMILY NOT NAMED	coord: 11..96
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 11..96

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0004045	PI0004045	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0004045.1-five_prime_utr	PI0004045.1-five_prime_utr-chr01:5537546..5537598	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0004045.1-exon	PI0004045.1-exon-chr01:5537546..5537901	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0004045.1-cds	PI0004045.1-cds-chr01:5537599..5537901	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0004045.1	PI0004045.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin