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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAGTTAGGTTGGTTGCAATGTTGGGAGATTGTGAAGAATATAACCAAATTGTTTGTGGAATTATAATTCTTGAGTTAATTTTCATGTTGGGAGAGAAGTTTCTCCCACCAAATTTCGTTGGGCTTGGGCCATGGACTTTGAGTCTAGGAAGGCAACCCTCACAAAAAAGTTAATTGATTTTCTCCATCAATATAATATAAAAAAATAATACCCAATTATGGTTAGAAATTCAATTTTCCTCGCAAAGAAAAAGAGAAATTATGGTCCGGCAGTTTCCTTTTTTGTTGAAAATGGAGAAAAAAAAAGAAAAAAAAAAGAGAAGAAAAAAAACCTCGCCGAGTGGTCCGTAGCGTTTCAGAAGGCCCCCTCGTTACACTACTTTCTTTCGCCGCACCTGTCGTTTCGATCCCCAAAATTGTCGTTTTGGGTTTATTTATTTTTAATATTATCATTAATTAATTTTTTTCTCTTTATTTTTTCTCCCCCGCAACAGAGACTTTTTCCCCCATCCCGCTGGCGGCGCACTTCTCAGAGCCGACCGTCACTCTTATCACCGGTGAGGCTAACGTGCGCACATCACTCTCGTCTTCTTCCTCTCAACTGTTCTTGAATGCCGCCATAGACGAGCTTCTTCAAGGTCCACTTTTCTTTCCCTTACCAATTTGGTGTTTCTTTTCGCTTCTTTCTCAGCAATGCCGTTACAAACCCTAGATGCGTGTTTTCTTTCGTTTCTTATCGCATTACTGTTTTATTATTTTGGTATTGGTCGAGTTAGGAAGGTACTCTTTCTGATATTCATGGTAGAATTAGCTAATCGGTAGAATTTCTTTACTGGGGATTTTTTCTCTGTACTTTTGAATGTACGAGTTAGGGTATTTATTTTTATTTTTTTAAAGATTTATTTTTAATCTGAACATTTCTGCGTCTTCACGGGTGTAGGGTATTTTTGGATTAGCATCGTTTTTGTGGAGGACGGGATATTTGAGTTTTAG mRNA sequence ATGAAGTTAGAGACTTTTTCCCCCATCCCGCTGGCGGCGCACTTCTCAGAGCCGACCGTCACTCTTATCACCGGTGAGGCTAACGTGCGCACATCACTCTCGTCTTCTTCCTCTCAACTGTTCTTGAATGCCGCCATAGACGAGCTTCTTCAAGGGTATTTTTGGATTAGCATCGTTTTTGTGGAGGACGGGATATTTGAGTTTTAG Coding sequence (CDS) ATGAAGTTAGAGACTTTTTCCCCCATCCCGCTGGCGGCGCACTTCTCAGAGCCGACCGTCACTCTTATCACCGGTGAGGCTAACGTGCGCACATCACTCTCGTCTTCTTCCTCTCAACTGTTCTTGAATGCCGCCATAGACGAGCTTCTTCAAGGGTATTTTTGGATTAGCATCGTTTTTGTGGAGGACGGGATATTTGAGTTTTAG Protein sequence MKLETFSPIPLAAHFSEPTVTLITGEANVRTSLSSSSSQLFLNAAIDELLQGYFWISIVFVEDGIFEF
Homology
BLAST of PI0003103.1 vs. ExPASy TrEMBL
Match: A0A0A0LL62 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G365670 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.1e-05 Identity = 31/34 (91.18%), Postives = 31/34 (91.18%), Query Frame = 0
Query: 27 ANVRTSLSSSSSQLFLNAAIDELLQGYFWISIVF 61
ANVRTSLSSSSSQLF NAAIDELLQGY WISI F
Sbjct: 66 ANVRTSLSSSSSQLFSNAAIDELLQGYCWISIDF 99
BLAST of PI0003103.1 vs. NCBI nr
Match: KGN62660.1 (hypothetical protein Csa_022096 [Cucumis sativus]) HSP 1 Score: 57.8 bits (138), Expect = 4.3e-05 Identity = 31/34 (91.18%), Postives = 31/34 (91.18%), Query Frame = 0
Query: 27 ANVRTSLSSSSSQLFLNAAIDELLQGYFWISIVF 61
ANVRTSLSSSSSQLF NAAIDELLQGY WISI F
Sbjct: 66 ANVRTSLSSSSSQLFSNAAIDELLQGYCWISIDF 99
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LL62 | 2.1e-05 | 91.18 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G365670 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN62660.1 | 4.3e-05 | 91.18 | hypothetical protein Csa_022096 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| PI0003103 | PI0003103 | gene |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0003103.1-exon | PI0003103.1-exon-chr03:2235760..2235812 | exon |
| PI0003103.1-exon | PI0003103.1-exon-chr03:2236115..2236258 | exon |
| PI0003103.1-exon | PI0003103.1-exon-chr03:2236745..2236754 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0003103.1-cds | PI0003103.1-cds-chr03:2235760..2235812 | CDS |
| PI0003103.1-cds | PI0003103.1-cds-chr03:2236115..2236258 | CDS |
| PI0003103.1-cds | PI0003103.1-cds-chr03:2236745..2236754 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0003103.1 | PI0003103.1-protein | polypeptide |
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