Moc11g16060.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g16060.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr11: 12314050 .. 12314569 (-)
Sequence length	456
RNA-Seq Expression	Moc11g16060.1
Synteny	Moc11g16060.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGCCCCGATTGACCAGCTAGTAGATCTGCACTTCACGACGTGCTGTGTCGGATCTTTGGTGAGTGAGGAGCTTTCTGCTAGGAAAGTAAACTTGTCCCGAGAGCGCGAGGCTGTCAAGGCGATCGATGCTCTGAAGGCCGAGGTGGCTAAACTTAAAGCTGAGACGGCGGTTGAAGAGAAAGAGCGCACTATCCTAGAGAACCATCTAAGTCGAGCTCGCCTCACCATGAAGGATGCTGTGGCCAAGACGAAATTCAAACGGGGCAACCGCAGTGGTTAACCACCAGAAGAATTGGTCGACCTATGCTGACCTGGAGAACGCCATCAAGGTGATGCCTGAATTCAACGATGTGGTGAAGGGTCTAGCCAACAAAGGCTTTGACTTTGCCACAGAAGCCGTGAGGAAGTTGGCGCCTGAGCTCAACCTTACTTCAATATATCAGCAATACGAGGCTGAGTTAGATGCAGAGGATGATGAGGACGTCCTAGTAGCTGACCCAAACCCCGGAGCTTGA

mRNA sequence

ATGCAAGCCCCGATTGACCAGCTAGTAGATCTGCACTTCACGACGTGCTGTGTCGGATCTTTGGTGAGTGAGGAGCTTTCTGCTAGGAAAGTAAACTTGTCCCGAGAGCGCGAGGCTGTCAAGGCGATCGATGCTCTGAAGGCCGAGGTGGCTAAACTTAAAGCTGAGACGGCGGTTGAAGAGAAAGAGCGCACTATCCTAGAGAACCATCTAATGGTTAACCACCAGAAGAATTGGTCGACCTATGCTGACCTGGAGAACGCCATCAAGGTGATGCCTGAATTCAACGATGTGGTGAAGGGTCTAGCCAACAAAGGCTTTGACTTTGCCACAGAAGCCGTGAGGAAGTTGGCGCCTGAGCTCAACCTTACTTCAATATATCAGCAATACGAGGCTGAGTTAGATGCAGAGGATGATGAGGACGTCCTAGTAGCTGACCCAAACCCCGGAGCTTGA

Coding sequence (CDS)

ATGCAAGCCCCGATTGACCAGCTAGTAGATCTGCACTTCACGACGTGCTGTGTCGGATCTTTGGTGAGTGAGGAGCTTTCTGCTAGGAAAGTAAACTTGTCCCGAGAGCGCGAGGCTGTCAAGGCGATCGATGCTCTGAAGGCCGAGGTGGCTAAACTTAAAGCTGAGACGGCGGTTGAAGAGAAAGAGCGCACTATCCTAGAGAACCATCTAATGGTTAACCACCAGAAGAATTGGTCGACCTATGCTGACCTGGAGAACGCCATCAAGGTGATGCCTGAATTCAACGATGTGGTGAAGGGTCTAGCCAACAAAGGCTTTGACTTTGCCACAGAAGCCGTGAGGAAGTTGGCGCCTGAGCTCAACCTTACTTCAATATATCAGCAATACGAGGCTGAGTTAGATGCAGAGGATGATGAGGACGTCCTAGTAGCTGACCCAAACCCCGGAGCTTGA

Protein sequence

MQAPIDQLVDLHFTTCCVGSLVSEELSARKVNLSREREAVKAIDALKAEVAKLKAETAVEEKERTILENHLMVNHQKNWSTYADLENAIKVMPEFNDVVKGLANKGFDFATEAVRKLAPELNLTSIYQQYEAELDAEDDEDVLVADPNPGA

Homology

The following BLAST results are available for this feature:

BLAST of Moc11g16060.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g16060.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g16060.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g16060.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 36..63

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc11g16060	Moc11g16060	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc11g16060.1.exon2	Moc11g16060.1.exon2	exon
Moc11g16060.1.exon1	Moc11g16060.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc11g16060.1	cds.Moc11g16060.1_2	CDS
cds.Moc11g16060.1	cds.Moc11g16060.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc11g16060.1	Moc11g16060.1-protein	polypeptide