Moc11g13480.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g13480.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	BEST Arabidopsis thaliana protein match is: embryo defective 2170 .
Location	chr11: 9926536 .. 9928061 (-)
Sequence length	819
RNA-Seq Expression	Moc11g13480.1
Synteny	Moc11g13480.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGGTTCCGGGCGAAGACTGTTGGAGAGCCCTCTCGAATCCCCGGATCTTAGGGCTTGGAACGCCATGGAATTTGATTCCAGACCGGCTCTGAACCACGAGATCTTCAGGAGCTGGAATGGCAGGCAGATTCATCTGAGGGACGAGGCGGTGGAATTGGAATCTGGATTTCGTTTGAGCCCTCAACGGAGCCCTCAGTTCTACCGATCGAATTACCAGAGCCTGTCGCCGCCGTCGAAGGCTCGCGCCATAGCTACTGGACAGAAGGAGCTCATGGAAATGGTGAGCCATATGCCGGAGTCGTGCTACGAGTTGTCGTTGAGAGACCTGGTGGAGCAGCCTAGGGTTTTGGGGCTAGAAGAAGAAACTGTAGCTGATGAGAGGGATTTCAATTTGGGCGGGGATCGAGAGATTTTCGCGATGGAGAATCGGAAATCGAAGAAGGGAATTAGTAGGCCATTGGTTAGTAAGAGTACAGGGAATATGGAGAACGGAGGTTTGTATCTGAAAATGGGATTTCCGAAATCTATTGGAACGACTAAGAAGAAGAAGAAGAAGAACGATTCTGCGTTGAATACGAGTGCTAAAGTTTCGCCTAAACCTCCTCCTCCTGCGGACAAGGATTGGTGGAAGAGAAGATTCTCAGTTTCATCTGAGAGTGAAAGCGTTGGTTATGGTTCGAGTATTAACAATGGAAGCATCAAGAGCAGTAGCAGCAGCAGCAGCAATGGCAGCCATGGCAGCAACAAGAACAGAACAAAATCCGCCCGCAGGTAACACCATAACTATCAATCTGTGGTTTCTTTGGTTCACTCCGTAATTTTTTACTTGAGAAATGAACGTTTAGTTGATCTTCTGAGTTGAAATGAAGAACAGATGAATTCACCATTAAATAGAATAATTAATTTCTAATCTGCATCATTTTGGGTGGTGAAATTTTTCAAGACGTCCTGTTATGCACTAGTAACATAAGAATCTGCTAAGTTGAAGATGAATGATTTTTCTCTGAAATGAAGAACAGACAAATTCGCCATGATCGTACTCTAGTAATGTAAGAATCTGCTTTGTTGAAGATGAATGATTTCTCTCTGAAATGAAGAACAGACAAATTCACCATTAAATAGAGAATCGTTTCTACTCTGCTCTGCACTATTTTGGGTGGTAAAATTCCTCAAATTGTTCATGCACAAATATCTCAAGAATCTGCTCTGTTGGAGATGAATGATTTTTCTCTGAAATGAAGAACAGAGAAATTCACCACCCAATAAAATTATTTTTCCCAAGTTCTTCATACACTAGTATCATAACAATCTGCTGAGTAGAAGCAAATTCACCATTGAATCAATCATCTCTACTCTGCATCATTTTGGGAACTAAAATTTCTCAAGCTGTTCATGAATCAGTAACATAAGAGTCTGCTGTAAACTGGGTTCATCATCATTCATTCATTCATTATTATGAATCATAATTTAATCTACAGGAACACAAGTGGAGGTTGCTGGTCATGGATTTATTCAAAATAA

mRNA sequence

ATGATCGGTTCCGGGCGAAGACTGTTGGAGAGCCCTCTCGAATCCCCGGATCTTAGGGCTTGGAACGCCATGGAATTTGATTCCAGACCGGCTCTGAACCACGAGATCTTCAGGAGCTGGAATGGCAGGCAGATTCATCTGAGGGACGAGGCGGTGGAATTGGAATCTGGATTTCGTTTGAGCCCTCAACGGAGCCCTCAGTTCTACCGATCGAATTACCAGAGCCTGTCGCCGCCGTCGAAGGCTCGCGCCATAGCTACTGGACAGAAGGAGCTCATGGAAATGGTGAGCCATATGCCGGAGTCGTGCTACGAGTTGTCGTTGAGAGACCTGGTGGAGCAGCCTAGGGTTTTGGGGCTAGAAGAAGAAACTGTAGCTGATGAGAGGGATTTCAATTTGGGCGGGGATCGAGAGATTTTCGCGATGGAGAATCGGAAATCGAAGAAGGGAATTAGTAGGCCATTGGTTAGTAAGAGTACAGGGAATATGGAGAACGGAGGTTTGTATCTGAAAATGGGATTTCCGAAATCTATTGGAACGACTAAGAAGAAGAAGAAGAAGAACGATTCTGCGTTGAATACGAGTGCTAAAGTTTCGCCTAAACCTCCTCCTCCTGCGGACAAGGATTGGTGGAAGAGAAGATTCTCAGTTTCATCTGAGAGTGAAAGCGTTGGTTATGGTTCGAGTATTAACAATGGAAGCATCAAGAGCAGTAGCAGCAGCAGCAGCAATGGCAGCCATGGCAGCAACAAGAACAGAACAAAATCCGCCCGCAGGAACACAAGTGGAGGTTGCTGGTCATGGATTTATTCAAAATAA

Coding sequence (CDS)

ATGATCGGTTCCGGGCGAAGACTGTTGGAGAGCCCTCTCGAATCCCCGGATCTTAGGGCTTGGAACGCCATGGAATTTGATTCCAGACCGGCTCTGAACCACGAGATCTTCAGGAGCTGGAATGGCAGGCAGATTCATCTGAGGGACGAGGCGGTGGAATTGGAATCTGGATTTCGTTTGAGCCCTCAACGGAGCCCTCAGTTCTACCGATCGAATTACCAGAGCCTGTCGCCGCCGTCGAAGGCTCGCGCCATAGCTACTGGACAGAAGGAGCTCATGGAAATGGTGAGCCATATGCCGGAGTCGTGCTACGAGTTGTCGTTGAGAGACCTGGTGGAGCAGCCTAGGGTTTTGGGGCTAGAAGAAGAAACTGTAGCTGATGAGAGGGATTTCAATTTGGGCGGGGATCGAGAGATTTTCGCGATGGAGAATCGGAAATCGAAGAAGGGAATTAGTAGGCCATTGGTTAGTAAGAGTACAGGGAATATGGAGAACGGAGGTTTGTATCTGAAAATGGGATTTCCGAAATCTATTGGAACGACTAAGAAGAAGAAGAAGAAGAACGATTCTGCGTTGAATACGAGTGCTAAAGTTTCGCCTAAACCTCCTCCTCCTGCGGACAAGGATTGGTGGAAGAGAAGATTCTCAGTTTCATCTGAGAGTGAAAGCGTTGGTTATGGTTCGAGTATTAACAATGGAAGCATCAAGAGCAGTAGCAGCAGCAGCAGCAATGGCAGCCATGGCAGCAACAAGAACAGAACAAAATCCGCCCGCAGGAACACAAGTGGAGGTTGCTGGTCATGGATTTATTCAAAATAA

Protein sequence

MIGSGRRLLESPLESPDLRAWNAMEFDSRPALNHEIFRSWNGRQIHLRDEAVELESGFRLSPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLRDLVEQPRVLGLEEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLYLKMGFPKSIGTTKKKKKKNDSALNTSAKVSPKPPPPADKDWWKRRFSVSSESESVGYGSSINNGSIKSSSSSSSNGSHGSNKNRTKSARRNTSGGCWSWIYSK

Homology

[Close]

BLAST of Moc11g13480.1 vs. NCBI nr
Match: XP_022153674.1 (uncharacterized protein LOC111021132 [Momordica charantia])

HSP 1 Score: 530.4 bits (1365), Expect = 9.1e-147
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MIGSGRRLLESPLESPDLRAWNAMEFDSRPALNHEIFRSWNGRQIHLRDEAVELESGFRL 60
           MIGSGRRLLESPLESPDLRAWNAMEFDSRPALNHEIFRSWNGRQIHLRDEAVELESGFRL
Sbjct: 1   MIGSGRRLLESPLESPDLRAWNAMEFDSRPALNHEIFRSWNGRQIHLRDEAVELESGFRL 60

Query: 61  SPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLRDLVEQPRVLGL 120
           SPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLRDLVEQPRVLGL
Sbjct: 61  SPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLRDLVEQPRVLGL 120

Query: 121 EEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLYLKMGFPKSIGT 180
           EEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLYLKMGFPKSIGT
Sbjct: 121 EEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLYLKMGFPKSIGT 180

Query: 181 TKKKKKKNDSALNTSAKVSPKPPPPADKDWWKRRFSVSSESESVGYGSSINNGSIKSSSS 240
           TKKKKKKNDSALNTSAKVSPKPPPPADKDWWKRRFSVSSESESVGYGSSINNGSIKSSSS
Sbjct: 181 TKKKKKKNDSALNTSAKVSPKPPPPADKDWWKRRFSVSSESESVGYGSSINNGSIKSSSS 240

Query: 241 SSSNGSHGSNKNRTKSARRNTSGGCWSWIYSK 273
           SSSNGSHGSNKNRTKSARRNTSGGCWSWIYSK
Sbjct: 241 SSSNGSHGSNKNRTKSARRNTSGGCWSWIYSK 272

[Close]

BLAST of Moc11g13480.1 vs. NCBI nr
Match: XP_023536601.1 (uncharacterized protein LOC111797724 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 371.7 bits (953), Expect = 5.4e-99
Identity = 208/286 (72.73%), Postives = 234/286 (81.82%), Query Frame = 0


Query: 1   MIGSGRRLLESPLESPDLRAWNAMEF----------DSRPALNHEIFRSWNGRQIHLRDE 60
           M+GS R+LL SP ESPD RA++AM+F           SRPALNH+IFRSWNG+QIHL+D+
Sbjct: 1   MLGSSRKLLSSPTESPDFRAFDAMDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDD 60

Query: 61  AVELESGFRL-SPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLR 120
              +E GFRL SPQRSPQFYRSNYQSLSPPSKA AIATGQKELME+V++MPESCYELSLR
Sbjct: 61  ET-VEYGFRLSSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLR 120

Query: 121 DLVEQPRVLGLEEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLY 180
           DLVEQP VLG +E T A+ERD   GGDRE+FAMENRKS+K  S  LV +S+ NMENGGLY
Sbjct: 121 DLVEQPMVLGQQEPTGANERD--KGGDREVFAMENRKSRKETS-ALVGRSSWNMENGGLY 180

Query: 181 LKMGFPKSIGTTKKKKKK---NDSALNTSAKVSPKPPPPADKDWWKRRFSVSSESESVGY 240
           LKMGFP SIGT  KKKKK   NDS LNTSAKVSPKP  P +KDWWKRR SVSSE+ SV Y
Sbjct: 181 LKMGFPNSIGTRTKKKKKNNNNDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAY 240

Query: 241 GSSINNGSIKSSSSSSSNGSHGSNKNRTKSARRNTSGGCWSWIYSK 273
            SS+NNGSIKSSSSSSSNGS+GSNKNRTKS+ R+ +GGCWS IY K
Sbjct: 241 DSSVNNGSIKSSSSSSSNGSNGSNKNRTKSSGRHANGGCWSCIYPK 282

[Close]

BLAST of Moc11g13480.1 vs. NCBI nr
Match: KAG6592161.1 (hypothetical protein SDJN03_14507, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 369.4 bits (947), Expect = 2.7e-98
Identity = 208/285 (72.98%), Postives = 232/285 (81.40%), Query Frame = 0


Query: 1   MIGSGRRLLESPLESPDLRAWNAMEF----------DSRPALNHEIFRSWNGRQIHLRDE 60
           M+GS R+LL SP ESPD RA++AM+F           SRPALNH+IFRSWNG+QIHL+D+
Sbjct: 1   MLGSSRKLLSSPTESPDFRAFDAMDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDD 60

Query: 61  AVELESGFRL-SPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLR 120
              +E GFRL SPQRSPQFYRSNYQSLSPPSKA AIATGQKELME+V++MPESCYELSLR
Sbjct: 61  EA-VEYGFRLSSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLR 120

Query: 121 DLVEQPRVLGLEEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLY 180
           DLVEQP VLG +E T A+ERD   GGDRE+FAMENRKSKK  S  LV +S+ NMENGGLY
Sbjct: 121 DLVEQPMVLGQQEPTGANERD--KGGDREVFAMENRKSKKETS-ALVGRSSWNMENGGLY 180

Query: 181 LKMGFPKSIG--TTKKKKKKNDSALNTSAKVSPKPPPPADKDWWKRRFSVSSESESVGYG 240
           LKMGFP SIG  T KKKKK NDS LNTSAKVSPKP  P +KDWWKRR SVSSE+ SV Y 
Sbjct: 181 LKMGFPNSIGTRTKKKKKKNNDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYD 240

Query: 241 SSINNGSIKSSSSSSSNGSHGSNKNRTKSARRNTSGGCWSWIYSK 273
           SS+NNGSIKSSSSSSSNGS+GSNKNRTKS+ R+   GCWS IY K
Sbjct: 241 SSVNNGSIKSSSSSSSNGSNGSNKNRTKSSGRHAYRGCWSCIYPK 281

[Close]

BLAST of Moc11g13480.1 vs. NCBI nr
Match: XP_022937271.1 (uncharacterized protein LOC111443607 [Cucurbita moschata])

HSP 1 Score: 369.0 bits (946), Expect = 3.5e-98
Identity = 208/286 (72.73%), Postives = 232/286 (81.12%), Query Frame = 0


Query: 1   MIGSGRRLLESPLESPDLRAWNAMEF----------DSRPALNHEIFRSWNGRQIHLRDE 60
           M+GS R+LL SP ESPD RA++AM+F           SRPALNH+IFRSWNG+QIHL+D+
Sbjct: 1   MLGSSRKLLSSPTESPDFRAFDAMDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDD 60

Query: 61  AVELESGFRL-SPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLR 120
              +E GFRL SPQRSPQFYRSNYQSLSPPSKA AIATGQKELME+V++MPESCYELSLR
Sbjct: 61  EA-VEYGFRLSSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLR 120

Query: 121 DLVEQPRVLGLEEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLY 180
           DLVEQP VLG +E T A+ERD   GGDRE+FAMENRKSKK  S  LV +S+ NMENGGLY
Sbjct: 121 DLVEQPMVLGQQEPTGANERD--KGGDREVFAMENRKSKKETS-ALVGRSSWNMENGGLY 180

Query: 181 LKMGFPKSIGT---TKKKKKKNDSALNTSAKVSPKPPPPADKDWWKRRFSVSSESESVGY 240
           LKMGFP SIGT    KKKKK NDS LNTSAKVSPKP  P +KDWWKRR SVSSE+ SV Y
Sbjct: 181 LKMGFPNSIGTRTKKKKKKKNNDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAY 240

Query: 241 GSSINNGSIKSSSSSSSNGSHGSNKNRTKSARRNTSGGCWSWIYSK 273
            SS+NNGSIKSSSSSSSNGS+GSNKNRTKS+ R+   GCWS IY K
Sbjct: 241 DSSVNNGSIKSSSSSSSNGSNGSNKNRTKSSGRHAYRGCWSCIYPK 282

[Close]

BLAST of Moc11g13480.1 vs. NCBI nr
Match: XP_022975014.1 (uncharacterized protein LOC111473911 [Cucurbita maxima])

HSP 1 Score: 367.5 bits (942), Expect = 1.0e-97
Identity = 206/285 (72.28%), Postives = 232/285 (81.40%), Query Frame = 0


Query: 1   MIGSGRRLLESPLESPDLRAWNAMEF----------DSRPALNHEIFRSWNGRQIHLRDE 60
           M+GS R+LL SP ESPD RA++AM+F           SRPALNH+IFRSWNG+QIHL+D+
Sbjct: 1   MLGSSRKLLSSPTESPDFRAFDAMDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDD 60

Query: 61  AVELESGFRL-SPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLR 120
              +E GFRL SPQRSPQFYRSNYQSLSPPSK+ AIATGQKELME+V++MPESCYELSLR
Sbjct: 61  ET-VEYGFRLSSPQRSPQFYRSNYQSLSPPSKSLAIATGQKELMELVNNMPESCYELSLR 120

Query: 121 DLVEQPRVLGLEEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLY 180
           DLVEQP VLG +E T A+ERD   GGDRE+FA ENRKSKK  S  LV +S+ NMENGGLY
Sbjct: 121 DLVEQPMVLGQQEPTGANERD--KGGDREVFATENRKSKKETS-GLVGRSSWNMENGGLY 180

Query: 181 LKMGFPKSIG--TTKKKKKKNDSALNTSAKVSPKPPPPADKDWWKRRFSVSSESESVGYG 240
           LKMGFP SIG  T KKKKK NDS LNTSAKVSPKP  P +KDWWKRR SVSSE+ SV Y 
Sbjct: 181 LKMGFPNSIGTRTKKKKKKNNDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYD 240

Query: 241 SSINNGSIKSSSSSSSNGSHGSNKNRTKSARRNTSGGCWSWIYSK 273
           S +NNGSIKSSSSSSSNGS+GSNKNRTKS+ R+ +GGCWS IY K
Sbjct: 241 SIVNNGSIKSSSSSSSNGSNGSNKNRTKSSGRHANGGCWSCIYPK 281

[Close]

BLAST of Moc11g13480.1 vs. ExPASy TrEMBL
Match: A0A6J1DJS6 (uncharacterized protein LOC111021132 OS=Momordica charantia OX=3673 GN=LOC111021132 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.4e-147
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MIGSGRRLLESPLESPDLRAWNAMEFDSRPALNHEIFRSWNGRQIHLRDEAVELESGFRL 60
           MIGSGRRLLESPLESPDLRAWNAMEFDSRPALNHEIFRSWNGRQIHLRDEAVELESGFRL
Sbjct: 1   MIGSGRRLLESPLESPDLRAWNAMEFDSRPALNHEIFRSWNGRQIHLRDEAVELESGFRL 60

Query: 61  SPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLRDLVEQPRVLGL 120
           SPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLRDLVEQPRVLGL
Sbjct: 61  SPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLRDLVEQPRVLGL 120

Query: 121 EEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLYLKMGFPKSIGT 180
           EEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLYLKMGFPKSIGT
Sbjct: 121 EEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLYLKMGFPKSIGT 180

Query: 181 TKKKKKKNDSALNTSAKVSPKPPPPADKDWWKRRFSVSSESESVGYGSSINNGSIKSSSS 240
           TKKKKKKNDSALNTSAKVSPKPPPPADKDWWKRRFSVSSESESVGYGSSINNGSIKSSSS
Sbjct: 181 TKKKKKKNDSALNTSAKVSPKPPPPADKDWWKRRFSVSSESESVGYGSSINNGSIKSSSS 240

Query: 241 SSSNGSHGSNKNRTKSARRNTSGGCWSWIYSK 273
           SSSNGSHGSNKNRTKSARRNTSGGCWSWIYSK
Sbjct: 241 SSSNGSHGSNKNRTKSARRNTSGGCWSWIYSK 272

[Close]

BLAST of Moc11g13480.1 vs. ExPASy TrEMBL
Match: A0A6J1F9W6 (uncharacterized protein LOC111443607 OS=Cucurbita moschata OX=3662 GN=LOC111443607 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.7e-98
Identity = 208/286 (72.73%), Postives = 232/286 (81.12%), Query Frame = 0


Query: 1   MIGSGRRLLESPLESPDLRAWNAMEF----------DSRPALNHEIFRSWNGRQIHLRDE 60
           M+GS R+LL SP ESPD RA++AM+F           SRPALNH+IFRSWNG+QIHL+D+
Sbjct: 1   MLGSSRKLLSSPTESPDFRAFDAMDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDD 60

Query: 61  AVELESGFRL-SPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLR 120
              +E GFRL SPQRSPQFYRSNYQSLSPPSKA AIATGQKELME+V++MPESCYELSLR
Sbjct: 61  EA-VEYGFRLSSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLR 120

Query: 121 DLVEQPRVLGLEEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLY 180
           DLVEQP VLG +E T A+ERD   GGDRE+FAMENRKSKK  S  LV +S+ NMENGGLY
Sbjct: 121 DLVEQPMVLGQQEPTGANERD--KGGDREVFAMENRKSKKETS-ALVGRSSWNMENGGLY 180

Query: 181 LKMGFPKSIGT---TKKKKKKNDSALNTSAKVSPKPPPPADKDWWKRRFSVSSESESVGY 240
           LKMGFP SIGT    KKKKK NDS LNTSAKVSPKP  P +KDWWKRR SVSSE+ SV Y
Sbjct: 181 LKMGFPNSIGTRTKKKKKKKNNDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAY 240

Query: 241 GSSINNGSIKSSSSSSSNGSHGSNKNRTKSARRNTSGGCWSWIYSK 273
            SS+NNGSIKSSSSSSSNGS+GSNKNRTKS+ R+   GCWS IY K
Sbjct: 241 DSSVNNGSIKSSSSSSSNGSNGSNKNRTKSSGRHAYRGCWSCIYPK 282

[Close]

BLAST of Moc11g13480.1 vs. ExPASy TrEMBL
Match: A0A6J1IJ72 (uncharacterized protein LOC111473911 OS=Cucurbita maxima OX=3661 GN=LOC111473911 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 4.9e-98
Identity = 206/285 (72.28%), Postives = 232/285 (81.40%), Query Frame = 0


Query: 1   MIGSGRRLLESPLESPDLRAWNAMEF----------DSRPALNHEIFRSWNGRQIHLRDE 60
           M+GS R+LL SP ESPD RA++AM+F           SRPALNH+IFRSWNG+QIHL+D+
Sbjct: 1   MLGSSRKLLSSPTESPDFRAFDAMDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDD 60

Query: 61  AVELESGFRL-SPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLR 120
              +E GFRL SPQRSPQFYRSNYQSLSPPSK+ AIATGQKELME+V++MPESCYELSLR
Sbjct: 61  ET-VEYGFRLSSPQRSPQFYRSNYQSLSPPSKSLAIATGQKELMELVNNMPESCYELSLR 120

Query: 121 DLVEQPRVLGLEEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLY 180
           DLVEQP VLG +E T A+ERD   GGDRE+FA ENRKSKK  S  LV +S+ NMENGGLY
Sbjct: 121 DLVEQPMVLGQQEPTGANERD--KGGDREVFATENRKSKKETS-GLVGRSSWNMENGGLY 180

Query: 181 LKMGFPKSIG--TTKKKKKKNDSALNTSAKVSPKPPPPADKDWWKRRFSVSSESESVGYG 240
           LKMGFP SIG  T KKKKK NDS LNTSAKVSPKP  P +KDWWKRR SVSSE+ SV Y 
Sbjct: 181 LKMGFPNSIGTRTKKKKKKNNDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYD 240

Query: 241 SSINNGSIKSSSSSSSNGSHGSNKNRTKSARRNTSGGCWSWIYSK 273
           S +NNGSIKSSSSSSSNGS+GSNKNRTKS+ R+ +GGCWS IY K
Sbjct: 241 SIVNNGSIKSSSSSSSNGSNGSNKNRTKSSGRHANGGCWSCIYPK 281

[Close]

BLAST of Moc11g13480.1 vs. ExPASy TrEMBL
Match: A0A1S4E6L8 (uncharacterized protein LOC103504041 OS=Cucumis melo OX=3656 GN=LOC103504041 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 4.6e-96
Identity = 205/282 (72.70%), Postives = 228/282 (80.85%), Query Frame = 0


Query: 1   MIGSGRRLLESPLESPDLRAWN-AMEF-------DSRPALNHEIFRSWNGRQIHLRDEAV 60
           MIG+ R+LL SP ESPD RA N  MEF        SRPALNH+IFRSWNG+QIHLRD+  
Sbjct: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDH- 60

Query: 61  ELESGFRL-SPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLRDL 120
             E GFRL SPQRSPQFYRSNY +LSPPSKA AIATGQKELME+V++MPESCYELSLRDL
Sbjct: 61  PFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDL 120

Query: 121 VEQPRVLGLEEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLYLK 180
           VEQP V+G  E+T  DERD NLGG RE+F+ ENRKS+K  +R LV +S  +MEN GLYLK
Sbjct: 121 VEQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKE-TRALVGRS--SMENEGLYLK 180

Query: 181 MGFPKSIG-TTKKKKKKNDSALNTSAKVSPKPPPPADKDWWKRRFSVSSESESVGYGSSI 240
           MGFPKSIG TT+KKKKKNDS+LN SAKVSPKPP   +KDWWKRR SVSSESESV YGS++
Sbjct: 181 MGFPKSIGTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNV 240

Query: 241 NNGSIKSSSSSSSNGSHGSNKNRTKSARRNTSGGCWSWIYSK 273
           NNGSIKSSSSSSSN   GSNK+RTKS  R   GGCWSWIY K
Sbjct: 241 NNGSIKSSSSSSSN---GSNKSRTKSTGRRAKGGCWSWIYPK 275

[Close]

BLAST of Moc11g13480.1 vs. ExPASy TrEMBL
Match: A0A5A7V1Z3 (Putative serine/threonine-protein kinase ndrD OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00330 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 6.5e-90
Identity = 197/270 (72.96%), Postives = 220/270 (81.48%), Query Frame = 0


Query: 1   MIGSGRRLLESPLESPDLRAWN-AMEF-------DSRPALNHEIFRSWNGRQIHLRDEAV 60
           MIG+ R+LL SP ESPD RA N  MEF        SRPALNH+IFRSWNG+QIHLRD+  
Sbjct: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDH- 60

Query: 61  ELESGFRL-SPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLRDL 120
             E GFRL SPQRSPQFYRSNY +LSPPSKA AIATGQKELME+V++MPESCYELSLRDL
Sbjct: 61  PFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDL 120

Query: 121 VEQPRVLGLEEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLYLK 180
           VEQP V+G  E+T  DERD NLGG RE+F+ ENRKS+K  +R LV +S  +MEN GLYLK
Sbjct: 121 VEQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKE-TRALVGRS--SMENEGLYLK 180

Query: 181 MGFPKSIG-TTKKKKKKNDSALNTSAKVSPKPPPPADKDWWKRRFSVSSESESVGYGSSI 240
           MGFPKSIG TT+KKKKKNDS+LN SAKVSPKPP   +KDWWKRR SVSSESESV YGS++
Sbjct: 181 MGFPKSIGTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNV 240

Query: 241 NNGSIKSSSSSSSNGSHGSNKNRTKSARRN 261
           NNGSIKSSSSSSSN   GSNK+RTKS  RN
Sbjct: 241 NNGSIKSSSSSSSN---GSNKSRTKSTGRN 263

[Close]

BLAST of Moc11g13480.1 vs. TAIR 10
Match: AT1G76980.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 61 Blast hits to 61 proteins in 18 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 2; Plants - 40; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-27
Identity = 95/227 (41.85%), Postives = 131/227 (57.71%), Query Frame = 0


Query: 58  FRLSPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLRDLVEQPRV 117
           +R SP +SP    +NYQ+LSP +KA+ IA GQ+ELM+MVS MPESCYELSL+DLVE    
Sbjct: 35  WRTSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCYELSLKDLVE---- 94

Query: 118 LGLEEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLYLKMGFPKS 177
           +  EEE V DE        R++  +   KS K +  P+     G + N G  LK+ FP S
Sbjct: 95  VNTEEEKVFDEMPQREKKPRKV--VRKTKSDKWVD-PI---RNGGVNNSGFLLKLVFPVS 154

Query: 178 IGTTKKKKKKNDSALNTSAKVSPK----PPPPA---------DKDWWKRRFSVSSESESV 237
           +G  KK  KK D+  + S+  S +     P P+         DKDWWK   S S  S+SV
Sbjct: 155 LGAKKKTNKKKDNDDDDSSVTSKRSWISSPRPSISDLSMKREDKDWWKDGLSESRRSQSV 214

Query: 238 GYGSSINNGSIKSSSSSSSNGSHGSNKNRTKSARRNTSGGCWSWIYS 272
              S IN+GS KSS  SSS     SN +R++++ R+ + GC S++++
Sbjct: 215 --VSRINSGSSKSSGGSSSR----SNSDRSRNSLRDENRGCLSFLWN 245

[Close]

BLAST of Moc11g13480.1 vs. TAIR 10
Match: AT1G76980.1 (BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 65 Blast hits to 65 proteins in 23 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 8; Plants - 40; Viruses - 3; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-25
Identity = 92/215 (42.79%), Postives = 122/215 (56.74%), Query Frame = 0


Query: 58  FRLSPQRSPQFYRSNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLRDLVEQPRV 117
           +R SP +SP    +NYQ+LSP +KA+ IA GQ+ELM+MVS MPESCYELSL+DLVE    
Sbjct: 35  WRTSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCYELSLKDLVE---- 94

Query: 118 LGLEEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLYLKMGFPKS 177
           +  EEE V DE        R++  +   KS K +  P+     G + N G  LK+ FP S
Sbjct: 95  VNTEEEKVFDEMPQREKKPRKV--VRKTKSDKWVD-PI---RNGGVNNSGFLLKLVFPVS 154

Query: 178 IGTTKKKKKKNDSALNTSAKVSPK----PPPPA---------DKDWWKRRFSVSSESESV 237
           +G  KK  KK D+  + S+  S +     P P+         DKDWWK   S S  S+SV
Sbjct: 155 LGAKKKTNKKKDNDDDDSSVTSKRSWISSPRPSISDLSMKREDKDWWKDGLSESRRSQSV 214

Query: 238 GYGSSINNGSIKSSSSSSSNGSHGSNKNRTKSARR 260
              S IN+GS KSS  SSS     SN +R++++ R
Sbjct: 215 --VSRINSGSSKSSGGSSSR----SNSDRSRNSLR 233

[Close]

BLAST of Moc11g13480.1 vs. TAIR 10
Match: AT1G21390.1 (embryo defective 2170 )

HSP 1 Score: 102.8 bits (255), Expect = 4.4e-22
Identity = 89/196 (45.41%), Postives = 109/196 (55.61%), Query Frame = 0


Query: 58  FRLSPQRS-PQFYR-SNYQSLSPPSKARAIATGQKELMEMVSHMPESCYELSLRDLVEQP 117
           +R SP +S P F+R  +Y SLSP SKA+AIA GQ+ELMEMVS MPESCYELSL+DLVE  
Sbjct: 35  WRTSPPKSPPPFHRPEDYWSLSPDSKAQAIARGQRELMEMVSKMPESCYELSLKDLVE-V 94

Query: 118 RVLGLEEETVADERDFNLGGDREIFAMENRKSKKGISRPLVSKSTGNMENGGLYLKMGFP 177
           +V    E  V DE       +R+   +   KS K +        +G   N G  LK+ F 
Sbjct: 95  KVNQENERKVFDE--LPKRANRQSKVVRKTKSDKRVD----PNRSGGGNNSGFLLKIMFL 154

Query: 178 KSIG-----TTKKKKKKNDSALNTSAKVSPKPP------PPADKDWWKRRFSVSSESESV 237
            S+G     T KKKKKK D A     KVSP+P          DK+WW R     SES + 
Sbjct: 155 VSLGAMKDTTKKKKKKKKDEA----CKVSPRPSISEETVKVEDKEWWNR----MSESSTK 214

Query: 238 GYGSSINNGSIKSSSS 241
             GSS +N SI+S SS
Sbjct: 215 RSGSSSSNNSIRSRSS 215

The following BLAST results are available for this feature:

BLAST of Moc11g13480.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153674.1	9.1e-147	100.00	uncharacterized protein LOC111021132 [Momordica charantia]	[more]
XP_023536601.1	5.4e-99	72.73	uncharacterized protein LOC111797724 [Cucurbita pepo subsp. pepo]	[more]
KAG6592161.1	2.7e-98	72.98	hypothetical protein SDJN03_14507, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022937271.1	3.5e-98	72.73	uncharacterized protein LOC111443607 [Cucurbita moschata]	[more]
XP_022975014.1	1.0e-97	72.28	uncharacterized protein LOC111473911 [Cucurbita maxima]	[more]

BLAST of Moc11g13480.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g13480.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJS6	4.4e-147	100.00	uncharacterized protein LOC111021132 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1F9W6	1.7e-98	72.73	uncharacterized protein LOC111443607 OS=Cucurbita moschata OX=3662 GN=LOC1114436...	[more]
A0A6J1IJ72	4.9e-98	72.28	uncharacterized protein LOC111473911 OS=Cucurbita maxima OX=3661 GN=LOC111473911...	[more]
A0A1S4E6L8	4.6e-96	72.70	uncharacterized protein LOC103504041 OS=Cucumis melo OX=3656 GN=LOC103504041 PE=...	[more]
A0A5A7V1Z3	6.5e-90	72.96	Putative serine/threonine-protein kinase ndrD OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Moc11g13480.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76980.2	1.5e-27	41.85	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G76980.1	1.9e-25	42.79	BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G2139...	[more]
AT1G21390.1	4.4e-22	45.41	embryo defective 2170	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..272
None	No IPR available	PANTHER	PTHR34193	OS11G0199801 PROTEIN	coord: 28..270
None	No IPR available	PANTHER	PTHR34193:SF1	OS11G0199801 PROTEIN	coord: 28..270

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc11g13480	Moc11g13480	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc11g13480.1.exon2	Moc11g13480.1.exon2	exon
Moc11g13480.1.exon1	Moc11g13480.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc11g13480.1	cds.Moc11g13480.1_2	CDS
cds.Moc11g13480.1	cds.Moc11g13480.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc11g13480.1	Moc11g13480.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity