Moc11g12870.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g12870.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr11: 9525275 .. 9530419 (-)
Sequence length	438
RNA-Seq Expression	Moc11g12870.1
Synteny	Moc11g12870.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCAGAAGAATGAATTGGAGACTTGGGCAGGTGATGAAGGTGGAGAAGAAGCAAGGAATTGCAGAAGAGTAGCACGGCACGTCAAAGGGGGAAATTACCCAATCGGCCACGATGAAACCCCATTTATTATTGAATTGAAAGCATACTCTTTCAACGCCGACGGAGAGGACCCGTCCCAAATACTGTACCATTTCCAGACGCAATTCGGTACAAGTCAGTGACAATGCCAAGGGATTTGTCTTTTACACAAAAACTTGCTTATATTAAAAGGAACGTTCCTTTTTCTTTCTTCGCCGAAGCCTTCGATCGTGTTGGAAAGTTGAAACTTGATCTAAATTCAAGTGGGGTAATTTCTAGATGGTCAAGTTTTTGCCTATTTGACGTGGCCGCTGAAGATTTGATCAGCATTTTCGCATGGAAGTTCAGCCTTTTGTCTGTGTTCATCAATGTCAACAGTTTTGCTCATTTTAGACAATTTAACATTTTTTTTTTTGACATCGGACACTTATACAATTTCACTCATTTGAAAATTAATCTAAAGACACTGTTTGATGTCAAAACAAAGGTTTGGTTAAATAGTTTGAAATATGTTGGGACTTGGAAGGTGAAATTATAGTATATCCCCTAGATCGAAAATTACGATTCATGACTGATTTTGTAATGCCAATCTACGCAGCTCAATATCACTAACGTGGAGCCTTATACAAAGGTAAAGATATCTTAGCTAATCACATTTGAGCTAGAATCTGACAGCTTTGTAAGCTGTTGGAACAGTTCAACAACCTTAAGTATCAAACCAATGATTCACGTAACACAAAAATTCCACTAACTCCTATAATTTCGTCATCACTTCTCTCAATTTAGTATGCAATTCTGTCTAGAACCAACCTAAGAATTCGAACATTTGACTAACTTGAACATCGAAATGTTTGTTCTTAAATAGTTCACTCCACTTAGCTTAACTAGTCATCTCGCTCAAGACTCGACCAATTGAAATTCAGCGTAAACTAAACAAAAGAAAAATGTTTGAAAGATGTTGGTTATGTTATTGGGATCCAGATGAGATTCTTGTATGCTGTTCCCAAGCAGAATTCCAAGAAAGTGCATATAAATATGCCCTTTGAACATTGAAAAATCGCCTATTTAAGGAACAATATCCTAAGTTGTCTAAAAAAATTGAGGAGATGATGATATAATTGCTCCAAACCGTTGGAAATCTCATACATCTCATGTGGGTTAGAGAATTGGTCGTTGATTATTTGATCGATTTATAAAAATTATCGTGAAAAAAATTTAAAGGCTAAGATAATGAAACATGTTTCGCCTTTTCTAAAGACAAATGTGAGGATATGTCGAGATAAATAATATATGTCCTAACTTATAAGTTCATGTTTGAATACAAGTTAGATATTATAATTTCCAACAACAACTATTCATATAGGAATGTAGGATAGAAAACTAATGTAATAACATTGGAATATTATATATATAGTTGCATCTGTATATACAAAAAGAGTAAAATATCATGTTAGCTCATTTATATTTATCGAGTCTAGCTTAACTTGTTAAAACAAATATTGTCTGTTGATTCATCATTAACATTACCGACCAAAAGGTCTTGTATTCCAACTCCACTCCACATCTGATTGAACTAAAAAGAAAATGGTATAAAAAAAAGCTCTACTCATACTTTAATTAGATAACAAGCATTAGTGATTAAATTGATTTGCTTATATGTAGGAAGTTTTAAGGAACTATATTTTTAAATTTTGTTCATCATAATTCATGTATTTAAACGTCTGTTTTGATCTTTGTACTTTTTAAAAGCGAAAAGTTTTGTCTATATTGATAAAATTTTAATATAAGTTTTTATACACAATTAAAAGTCTTTTATACAAAATCTATGGCTACTTTCAAAAATTTTAATGAGTGAAATGTCATGCTAAAATTTTGATTGAAAAAATGAAATAATAATGAAAGTGAAGGTATGATTACTTCAAGAAATACATGCTTAAATTGTATGTGATTTTCAGCTCACACGTGGCACATCTTGATTGGATAATAAAAATCACACGTGGCTTTCATCAATAAGACTCATTCCCTTGCCTTGGTCCTTTGAGATTTCGTTCTCATTTATTGGTTGAATCGATCAGCTTCACTTCGACTTAACACCAGTCTCCGACATTTCACGGTTACTTTAAAGAGCCGTTGAGGTCTTGTCGGGGATATTGTCGGATATTTGACCTATAAATAAAACACACTTGCCTCATTTTTAGGTACGAAAATACTAGATTTGCTCAGACATATACTGACTTTGGCAACGTAGTGCCTTTGTTTTGCATGTCTCTGAACGTATCTCCAGCTCGTCTTCCAGGTCATCCTCTATTTGAGCCGAGGTTCGCAGAGTTGGTCAATTTCTGATCAAACAGAAATATAACAACTAACCAAAACAATATTTAAATGTTTTTAACAATCTATAACTTTCTTTTTTAATCCAAATCATGCAAATAAATATAGGATGATAAAACTCTTTGATAGTTCCTTCCATAAATATCGATTTCATAAGAAGATATTTAAGAATTGTTACAGGAAGATAAAAGAAAAACGGACCAAAACAACGGAAGAGGGAAGTTGGGTAGAGAGAGGAGTGGGCTCACGACGCCAGGTAAGAAAACCAAAACCAGCGACCCGGGCCAACCATCGCCGACCCGGGGTCGACGCTGAGCAGTGCTCGGCGCCGACCAAATTTCGGTGCCGAGACCTTCTCGATGGCACCCGTGGTTCTCCTCGACCCTTGTGCAGCCCGATCCGGTTATACTCTATCTCAACCCTAACACTAGGCCCACAATGAAACACACGAGCCCAAGAGTCCAGATCTCCTAAGCACACTAGGATTTGACTTATGTAAATCCTAAAAGGATTGAGATTCGACCTCTATAATTCCTAAAGGGATTAGGATTCGACTTCTATAAATAAGAAGGTGAACCAAATCCTAAAGGTAAGCCTAATCACCCTACTCTCCATACCCGACTTCTTCGATTATGACTTAAACATCTGAACCTGTGTGGCAAGAGGCACTGATCTTGAGTGCTATTCTATTTAGCAGGTGGTGTTGATCCCTTTATTCTAGAAGATTCCATCTCAATCTAAAAAAAACTATCTTGGGTATGCAACCCAAAAATCTCGAAAGACAGCTCAGTTGAAGAAAATTCTTTTAGAGCCTGGTACAAGCCAAGTCCCTTCGATTTCGCAACAAGAGTCGGTTATAAAATAATCTTTTGGTCAGCTTTCTCGTTCTTGAAGACTTTCTGGTCGATAGGCTTTATAGGGGACCTGCCTTGTGGTGCAAATTTGGTGAGATCGCAGGAGGTCAAATTTCTACATCAACGAAAATAAAAGAGAATTAAACAATAGCCACTCATTTGACAAATTTAATTGAAAACTTCCATTCCTCACAAATTACCCATTTGCTAATTTCACTATACATGCATGAAACTTTTAATGGCACAAGTTGTCATTAAAATATTCTAATCATTTAAACTTTAAATTAAAAGAATAAGTTACTTACGATACTAGATACATCTCATAATATTTATGTAATTGTTAAATAAATGATTGGAGATTTACTTATTTGGTGGAGGGTAAAATACTATCTACTACGTGGTCTGCTACGAAAGATTATCTCACTTGATCTATATATCCTCTAACGTCATAAATAAATAGTCCAACTCGAGCTATCGAGCTCGACCAAAGTGTATCCATATAGCTCGGAACTCCACTGATGGCCTACGCTGAAGTATCTCGCACAAATCGTATGTACTACCTAATTAATTCTAGCAAATGTGTAATAGATCGAAGCTATGAGATTCACTGCCTAATTTTTATAAGTACCCAATCATTTTCGTTCATAGATGTGCAATCAGATTTCTCATTCTAAGAGCTATTAGGTCAGATTCCAACTAATTTGAACGTCAGAGTGTTTTGTTCTCTTTCTGAAAATCTATTCTCTCACACATCACTCCAAATAGCTCGACCTATCCTACTACTCACACGTGCTCTCAAGAGATCATAATTAGGTATAAACATTCTTAGAACGTTAACATATGTATTGATCTCAAACAAAAATCAATAGATCACTAATGATGAAATATTCTCTACGTGCCGCATCTTAAAGTCTCTAGTTCTGAATAGAAAAATAACTGCATGACAAGTTTGAACTTACAATTTTTACCGAAAAAATTTATAAAATACAGACACTTCGTTGAATTAAAATAAATGAAATAGTAAATCGCACGCGCTTAAATAAATATTTATTGATTACATTAAACATTAAATGAAAGGAGAGACATTAATACTTAACGATGGGATGGATAACCAATCAATGGATTCAATAAATTACATTATTGAGTTATTTAAATGTTGATAGTATAAATTAATTAAATTAATGTATGATTTTATTATTTTTATTTAATTAATTTTAAGCCCTTGCCTTTTGAGCAATAGTCCTCGGCGGAGATGAAAAAGCCTTGCAATCACCAATTTGTAGGTACATATTGGTATTGGGGCGCGCGGCAGAAAAAATCAGCCGAATTTCTTGCAGAGAGATGGTGGGCTTTGAAATGGCGGTGAAATTCTGGTGCTGATTTGACGAATTCACTTCTCGATCGGAAAACCTATCCAACTCTTATTGGCATACGCGTTTCAAATCATCATCATCATCATCATCGAGTAGACGGATTGGTGATTGTTTTCCGCAACAGGTTAGCTTCTACTTGGATTGCTAAATCGAATATTGTTCAGATCTGTTCGACTTAGGAACTGTTGCTTTACACTGTTGGACTACGAATCGGATTTGGGGAAATCATGTTCTCGCAGGAACTTGCTCCATTTGGAACATAACTTCGGTTTTTTATTGAGTATTTGGATTGTCCGGGGTTTCGGGGAATCTGTTCTTTGTAACCGAAATATTTTTTGGTTTCTTCAGCTGGGGGAACAGGGTTAGGGATTCTCCGATCCTTTCTAGTGGAATAGGACAATTATACTGTTGCCTGATTGCCTTCGAATTCTTACTTGAAATATGCATCCCCGTCACCGAAATACTGGAAATGGGTTTAGGTCTAGTTCCATGGGAGTGGGATTAG

mRNA sequence

ATGAATCAGAAGAATGAATTGGAGACTTGGGCAGGTGATGAAGGTGGAGAAGAAGCAAGGAATTGCAGAAGAGTAGCACGGCACGTCAAAGGGGGAAATTACCCAATCGGCCACGATGAAACCCCATTTATTATTGAATTGAAAGCATACTCTTTCAACGCCGACGGAGAGGACCCGTCCCAAATACTGTACCATTTCCAGACGCAATTCGTGCCTTTGTTTTGCATGTCTCTGAACGTATCTCCAGCTCGTCTTCCAGGTCATCCTCTATTTGAGCCGAGCTGGGGGAACAGGGTTAGGGATTCTCCGATCCTTTCTAGTGGAATAGGACAATTATACTGTTGCCTGATTGCCTTCGAATTCTTACTTGAAATATGCATCCCCGTCACCGAAATACTGGAAATGGGTTTAGGTCTAGTTCCATGGGAGTGGGATTAG

Coding sequence (CDS)

ATGAATCAGAAGAATGAATTGGAGACTTGGGCAGGTGATGAAGGTGGAGAAGAAGCAAGGAATTGCAGAAGAGTAGCACGGCACGTCAAAGGGGGAAATTACCCAATCGGCCACGATGAAACCCCATTTATTATTGAATTGAAAGCATACTCTTTCAACGCCGACGGAGAGGACCCGTCCCAAATACTGTACCATTTCCAGACGCAATTCGTGCCTTTGTTTTGCATGTCTCTGAACGTATCTCCAGCTCGTCTTCCAGGTCATCCTCTATTTGAGCCGAGCTGGGGGAACAGGGTTAGGGATTCTCCGATCCTTTCTAGTGGAATAGGACAATTATACTGTTGCCTGATTGCCTTCGAATTCTTACTTGAAATATGCATCCCCGTCACCGAAATACTGGAAATGGGTTTAGGTCTAGTTCCATGGGAGTGGGATTAG

Protein sequence

MNQKNELETWAGDEGGEEARNCRRVARHVKGGNYPIGHDETPFIIELKAYSFNADGEDPSQILYHFQTQFVPLFCMSLNVSPARLPGHPLFEPSWGNRVRDSPILSSGIGQLYCCLIAFEFLLEICIPVTEILEMGLGLVPWEWD

Homology

The following BLAST results are available for this feature:

BLAST of Moc11g12870.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g12870.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g12870.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g12870.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc11g12870	Moc11g12870	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc11g12870.1.exon3	Moc11g12870.1.exon3	exon
Moc11g12870.1.exon2	Moc11g12870.1.exon2	exon
Moc11g12870.1.exon1	Moc11g12870.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc11g12870.1	cds.Moc11g12870.1_3	CDS
cds.Moc11g12870.1	cds.Moc11g12870.1_2	CDS
cds.Moc11g12870.1	cds.Moc11g12870.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc11g12870.1	Moc11g12870.1-protein	polypeptide