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Moc11g10930.1 (mRNA) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGTGCGAGCTGTGTGGGCAGCAAGCGAGGATGTTCTGCGAGTCGGATCAAGCGAACCTGTGTTGGGACTGCGATGAGAAGGTTCACTGTGCAAATTTCCTTGTCGCGAAGCATTCTCGAAGCCTTCTCTGCCATGTGTGTCAGTCGCCGACTCCATGGACGGCCTCTGGTCGGAAGCTCACGCCGACTGTTTCGGTGTGCGAGGGATGCGTCGAAGTCCATGGAGGTAAATGCGAGCAAGGTGCGTACCAAGAGAGGCGTAGAGATAACGAGGATGTAGTTGATGACGGTGATGATTTGGAGGATGGTGAAGGTTTTGAGAGTTATGAGGGAGGTGATAGTGAGGAAGACGATGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGGGGAGGAGGAAGAGGATGAGGACGGAGAAAACCAGGTGGTGCCGTGGTCTTACGCATCTTATTCGTCGCCACCACCGCCTCCGACAGTGACCTCTAGCAGCGAGGGCGAGGTTTCAGCCGGCGCTGGTGTGACATCGAAGCGTATGAGAGATTACGGCGTGGATCTCGATTCTGATGTATGTATTTGTTAGGTTTTCTTTGCTATTTCCTTTTTCTGTGAAAATTTCTTTCTCATCGTCTGTGCCGAAGTAAATCTTTGAGGCTGTGGAATTCTTTTTTTGTTCGCTTTCCTTAAAGTACAATCGGTGTTTTCTAGAACGATAGGGATTTCAGTTCTCTTACTGAATCAAGACTCGAGTTTAGAACAGAATCGTTCTGTTTTTACGAATGATACGAGTTTCAGCCTTCTTGACCTTTGATTTTGATACTGATTCATATTTAAGTTTCCGATCTGAAATATCATCATCATTTTCCGAGTTGTTAATTTTCCAGTAATCGAAACAGTGTTTTAACTGATCGTTTGTTACTTGAATGCAGGACGAAATCGAGAGTTCTTCTGCGCGACAGGGAACCAGGCCATTTTTCAACGACGAAGCGACTTCCTCGAGTTCCCTCAGGCCACTGAAGCAAGCCAGAGTTACAGGACGTAGCCAATCAGCCAGCACCATCCCAGATGATGCAGCTTGTAAACCAGAGTTAGAATCCACGGCTGTGGTTAGATCGATCCAGAGACTCCAGAGTCGTCTGCCTAGCGACATTAACGATGCTTCCAAAGTCATTTTCGGGATATGCAAAATGAGCAGAGATCAGAATCGTTGA ATGAAGAAGTGCGAGCTGTGTGGGCAGCAAGCGAGGATGTTCTGCGAGTCGGATCAAGCGAACCTGTGTTGGGACTGCGATGAGAAGGTTCACTGTGCAAATTTCCTTGTCGCGAAGCATTCTCGAAGCCTTCTCTGCCATGTGTGTCAGTCGCCGACTCCATGGACGGCCTCTGGTCGGAAGCTCACGCCGACTGTTTCGGTGTGCGAGGGATGCGTCGAAGTCCATGGAGGTAAATGCGAGCAAGGTGCGTACCAAGAGAGGCGTAGAGATAACGAGGATGTAGTTGATGACGGTGATGATTTGGAGGATGGTGAAGGTTTTGAGAGTTATGAGGGAGGTGATAGTGAGGAAGACGATGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGGGGAGGAGGAAGAGGATGAGGACGGAGAAAACCAGGTGGTGCCGTGGTCTTACGCATCTTATTCGTCGCCACCACCGCCTCCGACAGTGACCTCTAGCAGCGAGGGCGAGGTTTCAGCCGGCGCTGGTGTGACATCGAAGCGTATGAGAGATTACGGCGTGGATCTCGATTCTGATGACGAAATCGAGAGTTCTTCTGCGCGACAGGGAACCAGGCCATTTTTCAACGACGAAGCGACTTCCTCGAGTTCCCTCAGGCCACTGAAGCAAGCCAGAGTTACAGGACGTAGCCAATCAGCCAGCACCATCCCAGATGATGCAGCTTGTAAACCAGAGTTAGAATCCACGGCTGTGGTTAGATCGATCCAGAGACTCCAGAGTCGTCTGCCTAGCGACATTAACGATGCTTCCAAAGTCATTTTCGGGATATGCAAAATGAGCAGAGATCAGAATCGTTGA ATGAAGAAGTGCGAGCTGTGTGGGCAGCAAGCGAGGATGTTCTGCGAGTCGGATCAAGCGAACCTGTGTTGGGACTGCGATGAGAAGGTTCACTGTGCAAATTTCCTTGTCGCGAAGCATTCTCGAAGCCTTCTCTGCCATGTGTGTCAGTCGCCGACTCCATGGACGGCCTCTGGTCGGAAGCTCACGCCGACTGTTTCGGTGTGCGAGGGATGCGTCGAAGTCCATGGAGGTAAATGCGAGCAAGGTGCGTACCAAGAGAGGCGTAGAGATAACGAGGATGTAGTTGATGACGGTGATGATTTGGAGGATGGTGAAGGTTTTGAGAGTTATGAGGGAGGTGATAGTGAGGAAGACGATGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGGGGAGGAGGAAGAGGATGAGGACGGAGAAAACCAGGTGGTGCCGTGGTCTTACGCATCTTATTCGTCGCCACCACCGCCTCCGACAGTGACCTCTAGCAGCGAGGGCGAGGTTTCAGCCGGCGCTGGTGTGACATCGAAGCGTATGAGAGATTACGGCGTGGATCTCGATTCTGATGACGAAATCGAGAGTTCTTCTGCGCGACAGGGAACCAGGCCATTTTTCAACGACGAAGCGACTTCCTCGAGTTCCCTCAGGCCACTGAAGCAAGCCAGAGTTACAGGACGTAGCCAATCAGCCAGCACCATCCCAGATGATGCAGCTTGTAAACCAGAGTTAGAATCCACGGCTGTGGTTAGATCGATCCAGAGACTCCAGAGTCGTCTGCCTAGCGACATTAACGATGCTTCCAAAGTCATTTTCGGGATATGCAAAATGAGCAGAGATCAGAATCGTTGA MKKCELCGQQARMFCESDQANLCWDCDEKVHCANFLVAKHSRSLLCHVCQSPTPWTASGRKLTPTVSVCEGCVEVHGGKCEQGAYQERRRDNEDVVDDGDDLEDGEGFESYEGGDSEEDDEEEEEEEEEEGEEEEDEDGENQVVPWSYASYSSPPPPPTVTSSSEGEVSAGAGVTSKRMRDYGVDLDSDDEIESSSARQGTRPFFNDEATSSSSLRPLKQARVTGRSQSASTIPDDAACKPELESTAVVRSIQRLQSRLPSDINDASKVIFGICKMSRDQNR Homology
BLAST of Moc11g10930.1 vs. NCBI nr
Match: XP_022139730.1 (protein BFR2 [Momordica charantia]) HSP 1 Score: 540.8 bits (1392), Expect = 7.0e-150 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
BLAST of Moc11g10930.1 vs. NCBI nr
Match: XP_038899463.1 (nucleolin [Benincasa hispida]) HSP 1 Score: 460.7 bits (1184), Expect = 9.2e-126 Identity = 240/284 (84.51%), Postives = 263/284 (92.61%), Query Frame = 0
BLAST of Moc11g10930.1 vs. NCBI nr
Match: XP_008454616.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis melo] >KAA0036743.1 zinc finger protein CONSTANS-LIKE 4 [Cucumis melo var. makuwa] >TYJ95810.1 zinc finger protein CONSTANS-LIKE 4 [Cucumis melo var. makuwa]) HSP 1 Score: 448.7 bits (1153), Expect = 3.6e-122 Identity = 237/282 (84.04%), Postives = 254/282 (90.07%), Query Frame = 0
BLAST of Moc11g10930.1 vs. NCBI nr
Match: XP_022936446.1 (protein BFR2 [Cucurbita moschata]) HSP 1 Score: 448.0 bits (1151), Expect = 6.1e-122 Identity = 235/283 (83.04%), Postives = 258/283 (91.17%), Query Frame = 0
BLAST of Moc11g10930.1 vs. NCBI nr
Match: XP_004146838.1 (zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus] >KGN59860.1 hypothetical protein Csa_002023 [Cucumis sativus]) HSP 1 Score: 444.1 bits (1141), Expect = 8.9e-121 Identity = 235/282 (83.33%), Postives = 254/282 (90.07%), Query Frame = 0
BLAST of Moc11g10930.1 vs. ExPASy Swiss-Prot
Match: O22800 (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana OX=3702 GN=COL14 PE=1 SV=2) HSP 1 Score: 63.5 bits (153), Expect = 4.3e-09 Identity = 36/87 (41.38%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of Moc11g10930.1 vs. ExPASy Swiss-Prot
Match: Q9LJB7 (B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 5.6e-09 Identity = 33/78 (42.31%), Postives = 42/78 (53.85%), Query Frame = 0
BLAST of Moc11g10930.1 vs. ExPASy Swiss-Prot
Match: O23379 (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN=COL11 PE=1 SV=2) HSP 1 Score: 63.2 bits (152), Expect = 5.6e-09 Identity = 31/72 (43.06%), Postives = 45/72 (62.50%), Query Frame = 0
BLAST of Moc11g10930.1 vs. ExPASy Swiss-Prot
Match: Q9LUA9 (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.6e-08 Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 0
BLAST of Moc11g10930.1 vs. ExPASy Swiss-Prot
Match: Q9SSE5 (Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=COL9 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.6e-08 Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of Moc11g10930.1 vs. ExPASy TrEMBL
Match: A0A6J1CD44 (protein BFR2 OS=Momordica charantia OX=3673 GN=LOC111010576 PE=4 SV=1) HSP 1 Score: 540.8 bits (1392), Expect = 3.4e-150 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
BLAST of Moc11g10930.1 vs. ExPASy TrEMBL
Match: A0A5D3B734 (Zinc finger protein CONSTANS-LIKE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00930 PE=4 SV=1) HSP 1 Score: 448.7 bits (1153), Expect = 1.7e-122 Identity = 237/282 (84.04%), Postives = 254/282 (90.07%), Query Frame = 0
BLAST of Moc11g10930.1 vs. ExPASy TrEMBL
Match: A0A1S3BZT7 (zinc finger protein CONSTANS-LIKE 4 OS=Cucumis melo OX=3656 GN=LOC103494983 PE=4 SV=1) HSP 1 Score: 448.7 bits (1153), Expect = 1.7e-122 Identity = 237/282 (84.04%), Postives = 254/282 (90.07%), Query Frame = 0
BLAST of Moc11g10930.1 vs. ExPASy TrEMBL
Match: A0A6J1F7H6 (protein BFR2 OS=Cucurbita moschata OX=3662 GN=LOC111443061 PE=4 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 3.0e-122 Identity = 235/283 (83.04%), Postives = 258/283 (91.17%), Query Frame = 0
BLAST of Moc11g10930.1 vs. ExPASy TrEMBL
Match: A0A0A0LCX6 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G850640 PE=4 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 4.3e-121 Identity = 235/282 (83.33%), Postives = 254/282 (90.07%), Query Frame = 0
BLAST of Moc11g10930.1 vs. TAIR 10
Match: AT4G27310.1 (B-box type zinc finger family protein ) HSP 1 Score: 143.7 bits (361), Expect = 2.3e-34 Identity = 103/229 (44.98%), Postives = 140/229 (61.14%), Query Frame = 0
BLAST of Moc11g10930.1 vs. TAIR 10
Match: AT5G54470.1 (B-box type zinc finger family protein ) HSP 1 Score: 117.9 bits (294), Expect = 1.4e-26 Identity = 93/214 (43.46%), Postives = 118/214 (55.14%), Query Frame = 0
BLAST of Moc11g10930.1 vs. TAIR 10
Match: AT2G33500.1 (B-box type zinc finger protein with CCT domain ) HSP 1 Score: 63.5 bits (153), Expect = 3.0e-10 Identity = 36/87 (41.38%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of Moc11g10930.1 vs. TAIR 10
Match: AT2G33500.2 (B-box type zinc finger protein with CCT domain ) HSP 1 Score: 63.5 bits (153), Expect = 3.0e-10 Identity = 36/87 (41.38%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of Moc11g10930.1 vs. TAIR 10
Match: AT4G15250.1 (B-box type zinc finger protein with CCT domain ) HSP 1 Score: 63.2 bits (152), Expect = 4.0e-10 Identity = 31/72 (43.06%), Postives = 45/72 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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