Moc11g10620.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g10620.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr11: 7674894 .. 7677759 (-)
Sequence length	846
RNA-Seq Expression	Moc11g10620.1
Synteny	Moc11g10620.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCGAAATATAATAGAGAACTCTCTTGCTGTTGTGGAGACAATTTTAGGGGAGGATCATTCTTCCCCACTGGTTGCTGTGATGGCATATGGTGGTTGGGTGTCGGGGATCTCCCTATTGGATGTTAATAGTATCATCGCGGCTGACAAAATAAAAGACAACATTGTTATGTATGGTTCGTGACTTCATCATCTAGGTGTTTGAAGAGTTATTAAGGACAGAATTGGAGAGGTCACTTGCCTGAGATCTCTTCGGATGAATATTCATCTTCGTTGCATATTGGTTCAGAGAACTTCCATTGTCCAAGGGCAAGGAAGACGGAGCAGAAGGTGGGCAACGATAAAGGTGCTGCAGCGACGATTAGCTCGAACACCATTTTGGAATCTGGAGAGGCTATCAGACTTAATTGTATTTCCATGACCAACGTGATTTGAGGAATTTGCCTAATCCTTCCTTACCTGTCATGGTGGAGAATAAAACAACTTTAGAAGCAATTATTTCCTTTCCAATTATGAATAAAGGAGCCATAATTGATAAAATACCTCAATTAATTGAGGACGTTGTGATCTTGGAGAAAGTGTTTAGTGGACTAAATTTTTTTCATATTCCTAGTTATTTGAATAGGCAAGCTGTTTTATTGACTAAGTTGGCAATTTCTTATCATTTCTATGTTCTTTGGGACAATTGTTTCCTTCGTGGATTGTAATGCTGATGCACTCTTCTGATGTAACTTTAGTGGTCCTATTTCTTTTTAATGCAATTTTTCTTTGTTTAAAATAAAAAGGGATGAAAATTAGCTTTTTATATATTATAAAACTCCTCGATCAACTTTTGAAATATACTCTTTATGTAACGTCCCGAGTCCCTCAGGTTAGTTAGTCTCGAATCAAGAGATTTTTATTTTTATTTTAAAATTAAACTTTAATAAAATTTATATTTATCGGGCTCCGTGTGGTTGGTTTTGTCTTAAGTTGGGATGAATTTCTTTTCTCTTTGGCTTGGTCATGTTGGGCCTTTTGGGTTGGTTTGGTTTTAAAACAAAGGAAAAGAAAGTTAATAATAAAAAAAGAAAATAAAACACATAGGGTTTTTCTTCCATCTTCTTCTTCCTTCTTGCCCTAGCCGGCCACACCCCCCCTTCTCTGTTTTTTCGTTAGCCCGTACCCTTCCTCCGGCGACGACAGCAGCAGCGGCGCATCCTTCAAGCCGGCGCCCAGCCCTCACGACGCTCTCGACGGTGGCGACCATTGCAGCAGGTACTTCTTCTTGACGTCGTAGGTAGCAGTAGCTGCGGCGGGTGGCGAGGGGTAGCGGGTCCAACGAGTCCATTGTTGCCTAGATCCGACACCTTCGAGCAGACCACGAGCAAGTCCGGCGAATTAGCGGCGACGCGTGACTGCTCCGAACAACATCGATTCTCGCCAGATCCGGCTGTCTTGACGGCGACTTTCCCCTTGCCGTCGCGTCCTTCGGCGCCCTGTACCTGCAGCACCTCTCCCCGACTCGAACAGAAGCGACCAGCTTGTGTTTGGCCCAGATTTGCGGCGTTTTCTTCCTCCCGGTGACTTTTGGTGTTGACCCACATCCGTTCGAAGCCCGATTTAGGCTACCCACACCTTGGCGAGCTAGATCTAAGTTACCCACACCTATACGAAGTCAATTTTGTGGTAATGAGTCATTTGAACCCTTTTAGGATTGATTTCGAAGGCGGAATGGTATATGTAACTTGCTGTTTTCTTTCTGTTTTAGTGCCTAGGTGTGAGATCGACGCAGAACTTAGGGGCGCGGTTGGGTGTAAGTAGACAAGGGGCGTGTGCGTGCGTTAATGTGTGTCAGATGGCTTCTAATGTGCTGTTTTTGTGATGTTTGATATTATTTTTGATACGCTGTTGTGTTAGGTAGCTCTCGGTTGTGGTAAACTGTATACTTGATGTAGTGTTGAATATTCGTTGGTGATAATAGTGGAAATCTTGCCTTGTTAAACTGCTGAGAATGGTTATGGGATAATGTATGTTTACAAAGGGTGCTCGTTAAATTAGAATCATTGTGATTATGTTTTTCTTATGATGTGGGCGTGCTTGTATAGTTTATATAAATGTTCATTTATGATGTGAGCGTGCTGGTTGAGCATATATAAATGTTTCTTTATGTTGCGAGCCTGCTGGTCTGACTCATATTATTTTCTTATGAGATGTGGGTGTAATAGAAGCATATTTTCGGACCCTATTCGCAGGCTAGGGGTTGACGTGGAGTTGGTTATGATAAGGAACGTTGGATTTTTGAGGAAAGTGAATGGGTGAGTGTCAGGGCCTCGGGTATAAATGGTCGGGGGCTGATACGTCACTAATGGAGTATCGAGGCCTCGGATAGAAATGGTCGAGGGTCGATGCGAGGAGCCTTTGAAAGGAAAACTATTGGGGCCTTGGGTAAAAATGATCAAGGGCCGATAGATGGTGAAGTCATCGGGGCCTTGGGTAAAAATGGTCGAGGGCCGATGCGGTAGTGTCGGGGCTCTGGGTAAAAATGGTCAGGGGCCGACTCTACTCGAAGAAGTTAATTGTGGAAGGCTAGGATAGCTGTGATATGCGTAGAGGTACATGAGATGTTAGGGAGACTCGAGGTTGGTAACTAATTGGTTCATGGTTGTGGTTGTTGCCGAATCTTATAGAATGTGTCTATGTTTGATTGCATAATGTGATGAAGAGCATGACTATGAATGTTTCATGATTTGGTTGAGCATGATGTGTGTGTTGTTAGTGAGGGCTACTTATGGAGTATATTTTATATACTCACCCCCTCTACAATTATTGTTTCAGGTGAAGGACTCGTTGGCGACCATGGTGATGAGACGGAGGAGACATGA

mRNA sequence

ATGGATCGAAATATAATAGAGAACTCTCTTGCTGTTGTGGAGACAATTTTAGGGGAGGATCATTCTTCCCCACTGGTTGCTGTGATGGCATATGGTGGTTGGGTGTCGGGGATCTCCCTATTGGATGTTAATAGACAGAATTGGAGAGGTCACTTGCCTGAGATCTCTTCGGATGAATATTCATCTTCGTTGCATATTGGTTCAGAGAACTTCCATTGTCCAAGGGCAAGGAAGACGGAGCAGAAGGTGGGCAACGATAAAGGTGCTGCAGCGACGATTAGCTCGAACACCATTTTGGAATCTGGAGAGGCTATCAGACTTAATTGTATTTCCATGACCAACCCGGCCACACCCCCCCTTCTCTGTTTTTTCGTTAGCCCGTACCCTTCCTCCGGCGACGACAGCAGCAGCGGCGCATCCTTCAAGCCGGCGCCCAGCCCTCACGACGCTCTCGACGGTGGCGACCATTGCAGCAGATCCGACACCTTCGAGCAGACCACGAGCAAGTCCGGCGAATTAGCGGCGACGCGTGACTGCTCCGAACAACATCGATTCTCGCCAGATCCGGCTGTCTTGACGGCGACTTTCCCCTTGCCGTCGCGTCCTTCGGCGCCCTGTACCTGCAGCACCTCTCCCCGACTCGAACAGAAGCGACCAGCTTGTGTTTGGCCCAGATTTGCGGCGTTTTCTTCCTCCCGGATTGATTTCGAAGGCGGAATGGTATATGTAACTTGCTGTTTTCTTTCTGTTTTAGTGCCTAGGTGTGAGATCGACGCAGAACTTAGGGGCGCGGTTGGGTGTGAAGGACTCGTTGGCGACCATGGTGATGAGACGGAGGAGACATGA

Coding sequence (CDS)

ATGGATCGAAATATAATAGAGAACTCTCTTGCTGTTGTGGAGACAATTTTAGGGGAGGATCATTCTTCCCCACTGGTTGCTGTGATGGCATATGGTGGTTGGGTGTCGGGGATCTCCCTATTGGATGTTAATAGACAGAATTGGAGAGGTCACTTGCCTGAGATCTCTTCGGATGAATATTCATCTTCGTTGCATATTGGTTCAGAGAACTTCCATTGTCCAAGGGCAAGGAAGACGGAGCAGAAGGTGGGCAACGATAAAGGTGCTGCAGCGACGATTAGCTCGAACACCATTTTGGAATCTGGAGAGGCTATCAGACTTAATTGTATTTCCATGACCAACCCGGCCACACCCCCCCTTCTCTGTTTTTTCGTTAGCCCGTACCCTTCCTCCGGCGACGACAGCAGCAGCGGCGCATCCTTCAAGCCGGCGCCCAGCCCTCACGACGCTCTCGACGGTGGCGACCATTGCAGCAGATCCGACACCTTCGAGCAGACCACGAGCAAGTCCGGCGAATTAGCGGCGACGCGTGACTGCTCCGAACAACATCGATTCTCGCCAGATCCGGCTGTCTTGACGGCGACTTTCCCCTTGCCGTCGCGTCCTTCGGCGCCCTGTACCTGCAGCACCTCTCCCCGACTCGAACAGAAGCGACCAGCTTGTGTTTGGCCCAGATTTGCGGCGTTTTCTTCCTCCCGGATTGATTTCGAAGGCGGAATGGTATATGTAACTTGCTGTTTTCTTTCTGTTTTAGTGCCTAGGTGTGAGATCGACGCAGAACTTAGGGGCGCGGTTGGGTGTGAAGGACTCGTTGGCGACCATGGTGATGAGACGGAGGAGACATGA

Protein sequence

MDRNIIENSLAVVETILGEDHSSPLVAVMAYGGWVSGISLLDVNRQNWRGHLPEISSDEYSSSLHIGSENFHCPRARKTEQKVGNDKGAAATISSNTILESGEAIRLNCISMTNPATPPLLCFFVSPYPSSGDDSSSGASFKPAPSPHDALDGGDHCSRSDTFEQTTSKSGELAATRDCSEQHRFSPDPAVLTATFPLPSRPSAPCTCSTSPRLEQKRPACVWPRFAAFSSSRIDFEGGMVYVTCCFLSVLVPRCEIDAELRGAVGCEGLVGDHGDETEET

Homology

The following BLAST results are available for this feature:

BLAST of Moc11g10620.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g10620.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g10620.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g10620.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..175

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc11g10620	Moc11g10620	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc11g10620.1.exon6	Moc11g10620.1.exon6	exon
Moc11g10620.1.exon5	Moc11g10620.1.exon5	exon
Moc11g10620.1.exon4	Moc11g10620.1.exon4	exon
Moc11g10620.1.exon3	Moc11g10620.1.exon3	exon
Moc11g10620.1.exon2	Moc11g10620.1.exon2	exon
Moc11g10620.1.exon1	Moc11g10620.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc11g10620.1	cds.Moc11g10620.1_6	CDS
cds.Moc11g10620.1	cds.Moc11g10620.1_5	CDS
cds.Moc11g10620.1	cds.Moc11g10620.1_4	CDS
cds.Moc11g10620.1	cds.Moc11g10620.1_3	CDS
cds.Moc11g10620.1	cds.Moc11g10620.1_2	CDS
cds.Moc11g10620.1	cds.Moc11g10620.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc11g10620.1	Moc11g10620.1-protein	polypeptide