Moc11g05460.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g05460.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	ethylene-responsive transcription factor SHINE 2-like
Location	chr11: 3621936 .. 3623351 (+)
Sequence length	828
RNA-Seq Expression	Moc11g05460.1
Synteny	Moc11g05460.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAGCAGGTGAAACTTTTAATGGCCAACGCCATTAAAAGTACAACTCTCTCAGCACAGCAGACTTCCCAATTCCCACCGACACCTCTATATAAATGCCTGAAATTATTACTCTCTCTACGTTTTTCAACTCTCTCTTCACCTGTTTTATTTTCTTTTAATTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCGCTGGTTGTGGTTTCTGCCCTCTGTTTCTCTCTCTCTATAGTTATGGTTTATTCGAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATCCGCCACCCATTACTGTAAAATTCCCATTTTCACAACGTTGTTTATTCTTCTGCTATAAATGTATGCGACATTGGTGGGTTTGTTGGTTTAAAGATGCTCTGTAACCCCATTTTCTGTCTGTGTCTGCTGCTCATAACCTGTTTGATGATTTGCCTGAATGAATTGGGCGGCCATGGCTGGCGGCGCATATTTCTGCATACTTGTAAACTACATTATTATTGCAAATTTTGTGTATTCTTCTGCTGAAAATATGTGGATTATTGCTTATGTTTGTTGGTCTAAAAACGCTCTGGAAAGTGAAAACCCATCTTCTGTCTGGTGCCCATAACCTGTTTGTTGGTTTTCCTGAAAGAAGCTATACGTCGTTTCTTAACATCATTATTGCAAACGTTGTATATTTGTTTTGCTTATGTTTGTTGGTTGAAAAAGGCTATGAAAAAACCCGCTTTTTTTATGCTTTTCGTTGATTTGCCCCAGAGAAGGTGACCGGCCATGGCTGCCATGGAGACGCATGTATCTGCAGATTTGTAAACGACATTATTATTGCAAATGGCATTGAGCCCACATTCTGATGTTTTTCAATTTTCTTTTCTTTTTGGTAGGAAGAGAAGGGTGTGGCTGGGGACATTTGACACGGCCGAGGATGCAGCACGAGCGTATGATCAAGCAGCCATCTTGATGAACGGCCAAAACGCCAAGACCAATTTCCCTGCATCGAAGAACCAAGCTGAAGAAGGCAGGCATGGGGATGGATCTTCTCCATTGTCCCCAAAAGCACTTTCAGAGCTACTCAGTACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCCTCCCTGACATGCCTGCGGCTCGACAGCGACAACGCCCACATCGGTGTCTGGCAGAAGCGCGCTGGCACTCGCGCTGCCTCCAATTGGGTCATGAGGATCGAGCTAGGAAAGAAGGAGACAGAGACGGAGACGCCATCCCCGTCGCCGTCATTGGAATCGGCAAGCGGGGAAGCAGATGGCCACCGGAATGGAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAATTGCTCAACTGGAACTGCCCTCTTCCTTCAACTTCAAGCTAA

mRNA sequence

ATGGTTGAGCAGGTGAAACTTTTAATGGCCAACGCCATTAAAAGTACAACTCTCTCAGCACAGCAGACTTCCCAATTCCCACCGACACCTCTATATAAATGCCTGAAATTATTACTCTCTCTACGTTTTTCAACTCTCTCTTCACCTGTTTTATTTTCTTTTAATTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCGCTGGTTGTGGTTTCTGCCCTCTGTTTCTCTCTCTCTATAGTTATGGTTTATTCGAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATCCGCCACCCATTACTGAAGAGAAGGGTGTGGCTGGGGACATTTGACACGGCCGAGGATGCAGCACGAGCGTATGATCAAGCAGCCATCTTGATGAACGGCCAAAACGCCAAGACCAATTTCCCTGCATCGAAGAACCAAGCTGAAGAAGGCAGGCATGGGGATGGATCTTCTCCATTGTCCCCAAAAGCACTTTCAGAGCTACTCAGTACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCCTCCCTGACATGCCTGCGGCTCGACAGCGACAACGCCCACATCGGTGTCTGGCAGAAGCGCGCTGGCACTCGCGCTGCCTCCAATTGGGTCATGAGGATCGAGCTAGGAAAGAAGGAGACAGAGACGGAGACGCCATCCCCGTCGCCGTCATTGGAATCGGCAAGCGGGGAAGCAGATGGCCACCGGAATGGAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAATTGCTCAACTGGAACTGCCCTCTTCCTTCAACTTCAAGCTAA

Coding sequence (CDS)

ATGGTTGAGCAGGTGAAACTTTTAATGGCCAACGCCATTAAAAGTACAACTCTCTCAGCACAGCAGACTTCCCAATTCCCACCGACACCTCTATATAAATGCCTGAAATTATTACTCTCTCTACGTTTTTCAACTCTCTCTTCACCTGTTTTATTTTCTTTTAATTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCGCTGGTTGTGGTTTCTGCCCTCTGTTTCTCTCTCTCTATAGTTATGGTTTATTCGAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATCCGCCACCCATTACTGAAGAGAAGGGTGTGGCTGGGGACATTTGACACGGCCGAGGATGCAGCACGAGCGTATGATCAAGCAGCCATCTTGATGAACGGCCAAAACGCCAAGACCAATTTCCCTGCATCGAAGAACCAAGCTGAAGAAGGCAGGCATGGGGATGGATCTTCTCCATTGTCCCCAAAAGCACTTTCAGAGCTACTCAGTACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCCTCCCTGACATGCCTGCGGCTCGACAGCGACAACGCCCACATCGGTGTCTGGCAGAAGCGCGCTGGCACTCGCGCTGCCTCCAATTGGGTCATGAGGATCGAGCTAGGAAAGAAGGAGACAGAGACGGAGACGCCATCCCCGTCGCCGTCATTGGAATCGGCAAGCGGGGAAGCAGATGGCCACCGGAATGGAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAATTGCTCAACTGGAACTGCCCTCTTCCTTCAACTTCAAGCTAA

Protein sequence

MVEQVKLLMANAIKSTTLSAQQTSQFPPTPLYKCLKLLLSLRFSTLSSPVLFSFNLSLSLSLSLSPSLVVVSALCFSLSIVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLNWNCPLPSTSS

Homology

[Close]

BLAST of Moc11g05460.1 vs. NCBI nr
Match: XP_022134182.1 (ethylene-responsive transcription factor SHINE 2-like [Momordica charantia])

HSP 1 Score: 532.7 bits (1371), Expect = 1.9e-147
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MVEQVKLLMANAIKSTTLSAQQTSQFPPTPLYKCLKLLLSLRFSTLSSPVLFSFNLSLSL 60
           MVEQVKLLMANAIKSTTLSAQQTSQFPPTPLYKCLKLLLSLRFSTLSSPVLFSFNLSLSL
Sbjct: 1   MVEQVKLLMANAIKSTTLSAQQTSQFPPTPLYKCLKLLLSLRFSTLSSPVLFSFNLSLSL 60

Query: 61  SLSLSPSLVVVSALCFSLSIVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTA 120
           SLSLSPSLVVVSALCFSLSIVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTA
Sbjct: 61  SLSLSPSLVVVSALCFSLSIVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTA 120

Query: 121 EDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCK 180
           EDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCK
Sbjct: 121 EDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCK 180

Query: 181 NPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASG 240
           NPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASG
Sbjct: 181 NPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASG 240

Query: 241 EADGHRNGIDEEDRIAMQMIEELLNWNCPLPSTSS 276
           EADGHRNGIDEEDRIAMQMIEELLNWNCPLPSTSS
Sbjct: 241 EADGHRNGIDEEDRIAMQMIEELLNWNCPLPSTSS 275

[Close]

BLAST of Moc11g05460.1 vs. NCBI nr
Match: XP_038899928.1 (ethylene-responsive transcription factor SHINE 2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 358.6 bits (919), Expect = 4.8e-95
Identity = 191/225 (84.89%), Postives = 196/225 (87.11%), Query Frame = 0


Query: 51  LFSFNLSLSLSLSLSPSLVVVSALCFSLSIVMVYSRKFRGVRQRQWGSWVSEIRHPLLKR 110
           LFSF+        LSPSLV  S    SLS VMVYSRKFRGVRQRQWGSWVSEIRHPLLKR
Sbjct: 20  LFSFSF-------LSPSLVEGSE---SLSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKR 79

Query: 111 RVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRHGDGSSPLSPKALSEL 170
           RVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASK+Q+EE  HG GSSP+SPKALSEL
Sbjct: 80  RVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSPMSPKALSEL 139

Query: 171 LSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETETETPS 230
           LSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRA SNWVMRIELGKK    + PS
Sbjct: 140 LSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKK----DVPS 199

Query: 231 PSPSLESASGEA--DGHRNGIDEEDRIAMQMIEELLNWNCPLPST 274
           PSPS ES S EA  DGHRNGIDEEDRIAMQMIEELLNWNCPLPST
Sbjct: 200 PSPSPESTSQEADGDGHRNGIDEEDRIAMQMIEELLNWNCPLPST 230

[Close]

BLAST of Moc11g05460.1 vs. NCBI nr
Match: XP_038899931.1 (ethylene-responsive transcription factor SHINE 2-like isoform X3 [Benincasa hispida])

HSP 1 Score: 356.7 bits (914), Expect = 1.8e-94
Identity = 184/209 (88.04%), Postives = 189/209 (90.43%), Query Frame = 0


Query: 68  LVVVSALCF-SLSIVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARA 127
           +V V  LC  SLS VMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARA
Sbjct: 1   MVEVITLCSESLSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARA 60

Query: 128 YDQAAILMNGQNAKTNFPASKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCKNPSPSL 187
           YDQAAILMNGQNAKTNFPASK+Q+EE  HG GSSP+SPKALSELLSTKLRKCCKNPSPSL
Sbjct: 61  YDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSL 120

Query: 188 TCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASGEA--DG 247
           TCLRLDSDNAHIGVWQKRAGTRA SNWVMRIELGKK    + PSPSPS ES S EA  DG
Sbjct: 121 TCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKK----DVPSPSPSPESTSQEADGDG 180

Query: 248 HRNGIDEEDRIAMQMIEELLNWNCPLPST 274
           HRNGIDEEDRIAMQMIEELLNWNCPLPST
Sbjct: 181 HRNGIDEEDRIAMQMIEELLNWNCPLPST 205

[Close]

BLAST of Moc11g05460.1 vs. NCBI nr
Match: XP_038899930.1 (ethylene-responsive transcription factor SHINE 2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 354.8 bits (909), Expect = 6.9e-94
Identity = 179/198 (90.40%), Postives = 183/198 (92.42%), Query Frame = 0


Query: 78  LSIVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQ 137
           LS VMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQ
Sbjct: 29  LSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQ 88

Query: 138 NAKTNFPASKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAH 197
           NAKTNFPASK+Q+EE  HG GSSP+SPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAH
Sbjct: 89  NAKTNFPASKDQSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAH 148

Query: 198 IGVWQKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASGEA--DGHRNGIDEEDRI 257
           IGVWQKRAGTRA SNWVMRIELGKK    + PSPSPS ES S EA  DGHRNGIDEEDRI
Sbjct: 149 IGVWQKRAGTRATSNWVMRIELGKK----DVPSPSPSPESTSQEADGDGHRNGIDEEDRI 208

Query: 258 AMQMIEELLNWNCPLPST 274
           AMQMIEELLNWNCPLPST
Sbjct: 209 AMQMIEELLNWNCPLPST 222

[Close]

BLAST of Moc11g05460.1 vs. NCBI nr
Match: KAG6591574.1 (Ethylene-responsive transcription factor SHINE 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 352.4 bits (903), Expect = 3.4e-93
Identity = 176/198 (88.89%), Postives = 181/198 (91.41%), Query Frame = 0


Query: 78  LSIVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQ 137
           +S VMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQ
Sbjct: 2   VSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQ 61

Query: 138 NAKTNFPASKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAH 197
           NAKTNFPASK+Q+ E  HG GSSP++PKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAH
Sbjct: 62  NAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAH 121

Query: 198 IGVWQKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASGEADGHRNGIDEEDRIAM 257
           IGVWQKRAGTRA SNWVMRIELGKK    E PSP PS ES S E DGHRNGIDEEDRIAM
Sbjct: 122 IGVWQKRAGTRATSNWVMRIELGKK----EIPSPLPSPESTSEEPDGHRNGIDEEDRIAM 181

Query: 258 QMIEELLNWNCPLPSTSS 276
           QMIEELLNWNCPLPS SS
Sbjct: 182 QMIEELLNWNCPLPSISS 195

[Close]

BLAST of Moc11g05460.1 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.6e-61
Identity = 120/189 (63.49%), Postives = 149/189 (78.84%), Query Frame = 0


Query: 82  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 141
           MV+SRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTF+TAE AARAYDQAA+LMNGQNAKT
Sbjct: 1   MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT 60

Query: 142 NFPASKNQAEEGRHGDGSSPL-SPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGV 201
           NFP  K++       D +SPL SPK+LSELL+ KLRK CK+ +PSLTCLRLD+D++HIGV
Sbjct: 61  NFPVVKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGV 120

Query: 202 WQKRAGTRAASNWVMRIELGK--KETETETPSPSPSLESASGEADGHRNGIDEEDRIAMQ 261
           WQKRAG++ +  WVMR+ELG    E+  +    + + ++   E +     I +ED++AM+
Sbjct: 121 WQKRAGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDEDQLAME 180

Query: 262 MIEELLNWN 268
           MIEELLNW+
Sbjct: 181 MIEELLNWS 189

[Close]

BLAST of Moc11g05460.1 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.0e-59
Identity = 116/188 (61.70%), Postives = 141/188 (75.00%), Query Frame = 0


Query: 82  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 141
           MV+S+KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAE AARAYDQAA+LMNGQ+AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 142 NFPASKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVW 201
           NFP  K+          S+  SPK+LSELL+ KLRK CK+ +P LTCLRLD+D++HIGVW
Sbjct: 61  NFPVIKSNGSNSLE-INSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVW 120

Query: 202 QKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIE 261
           QKRAG++ + NWV  +ELG K       +  P  +  + +       + E+D++AMQMIE
Sbjct: 121 QKRAGSKTSPNWVKLVELGDK------VNARPGGDIETNKMKVRNEDVQEDDQMAMQMIE 180

Query: 262 ELLNWNCP 270
           ELLNW CP
Sbjct: 181 ELLNWTCP 181

[Close]

BLAST of Moc11g05460.1 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.4e-57
Identity = 115/199 (57.79%), Postives = 145/199 (72.86%), Query Frame = 0


Query: 82  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 141
           MV ++KFRGVRQR WGSWV+EIRHPLLKRR+WLGTF+TAE+AARAYD+AA+LM+G+NAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 142 NFPASKNQAEEGRHGDG--------SSPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDS 201
           NFP + N   E   G          SS  S  +LS +LS KLRKCCK+PSPSLTCLRLD+
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 202 DNAHIGVWQKRAGTRAASNWVMRIELGKKETETETPSPSPS----LESASGEADGHRNGI 261
            ++HIGVWQKRAG+++ S+WVM +ELG   +  ET S +        +   E  G R  +
Sbjct: 121 ASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSREEV 180

Query: 262 -DEEDRIAMQMIEELLNWN 268
            DEE+++A+QMIEELLN N
Sbjct: 181 LDEEEKVALQMIEELLNTN 199

[Close]

BLAST of Moc11g05460.1 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-24
Identity = 77/181 (42.54%), Postives = 96/181 (53.04%), Query Frame = 0


Query: 86  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPA 145
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAEDAARAYD+AA LM G  A+TNFP 
Sbjct: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65

Query: 146 SKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRA 205
           + N              S K LS  L+ KL KC       +  L++          Q   
Sbjct: 66  NPNAIPTS---------SSKLLSATLTAKLHKC------YMASLQMTKQTQTQTQTQTAR 125

Query: 206 GTRAASNWVMRIELGKKETETETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLN 265
              A S+ V   E       TET      ++   G A+  +N    E+    QMIEELL+
Sbjct: 126 SQSADSDGVTANESHLNRGVTET----TEIKWEDGNANMQQNFRPLEEDHIEQMIEELLH 167

Query: 266 W 267
           +
Sbjct: 186 Y 167

[Close]

BLAST of Moc11g05460.1 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.4e-20
Identity = 50/93 (53.76%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 86  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPA 145
           +++RG RQR WGSWVSEIRH +LK R+W GTF++AEDAARAYD+AA LM G  A+TNFP 
Sbjct: 6   QRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRARTNFPY 65

Query: 146 SKNQAEEGRHGDGSSPLSPKALSELLSTKLRKC 179
           + N ++           S K LS  L  KL +C
Sbjct: 66  NPNASQSS---------SSKLLSATLIAKLHRC 89

[Close]

BLAST of Moc11g05460.1 vs. ExPASy TrEMBL
Match: A0A6J1BYX9 (ethylene-responsive transcription factor SHINE 2-like OS=Momordica charantia OX=3673 GN=LOC111006480 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 9.0e-148
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MVEQVKLLMANAIKSTTLSAQQTSQFPPTPLYKCLKLLLSLRFSTLSSPVLFSFNLSLSL 60
           MVEQVKLLMANAIKSTTLSAQQTSQFPPTPLYKCLKLLLSLRFSTLSSPVLFSFNLSLSL
Sbjct: 1   MVEQVKLLMANAIKSTTLSAQQTSQFPPTPLYKCLKLLLSLRFSTLSSPVLFSFNLSLSL 60

Query: 61  SLSLSPSLVVVSALCFSLSIVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTA 120
           SLSLSPSLVVVSALCFSLSIVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTA
Sbjct: 61  SLSLSPSLVVVSALCFSLSIVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTA 120

Query: 121 EDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCK 180
           EDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCK
Sbjct: 121 EDAARAYDQAAILMNGQNAKTNFPASKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCK 180

Query: 181 NPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASG 240
           NPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASG
Sbjct: 181 NPSPSLTCLRLDSDNAHIGVWQKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASG 240

Query: 241 EADGHRNGIDEEDRIAMQMIEELLNWNCPLPSTSS 276
           EADGHRNGIDEEDRIAMQMIEELLNWNCPLPSTSS
Sbjct: 241 EADGHRNGIDEEDRIAMQMIEELLNWNCPLPSTSS 275

[Close]

BLAST of Moc11g05460.1 vs. ExPASy TrEMBL
Match: A0A6J1F8L5 (ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443124 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.7e-93
Identity = 176/198 (88.89%), Postives = 181/198 (91.41%), Query Frame = 0


Query: 78  LSIVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQ 137
           +S VMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQ
Sbjct: 2   VSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQ 61

Query: 138 NAKTNFPASKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAH 197
           NAKTNFPASK+Q+ E  HG GSSP++PKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAH
Sbjct: 62  NAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAH 121

Query: 198 IGVWQKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASGEADGHRNGIDEEDRIAM 257
           IGVWQKRAGTRA SNWVMRIELGKK    E PSP PS ES S E DGHRNGIDEEDRIAM
Sbjct: 122 IGVWQKRAGTRATSNWVMRIELGKK----EIPSPLPSPESTSQEPDGHRNGIDEEDRIAM 181

Query: 258 QMIEELLNWNCPLPSTSS 276
           QMIEELLNWNCPLPS SS
Sbjct: 182 QMIEELLNWNCPLPSISS 195

[Close]

BLAST of Moc11g05460.1 vs. ExPASy TrEMBL
Match: A0A6J1FE03 (ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443124 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 4.8e-93
Identity = 174/194 (89.69%), Postives = 178/194 (91.75%), Query Frame = 0


Query: 82  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 141
           MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT
Sbjct: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60

Query: 142 NFPASKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVW 201
           NFPASK+Q+ E  HG GSSP++PKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVW
Sbjct: 61  NFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVW 120

Query: 202 QKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIE 261
           QKRAGTRA SNWVMRIELGKK    E PSP PS ES S E DGHRNGIDEEDRIAMQMIE
Sbjct: 121 QKRAGTRATSNWVMRIELGKK----EIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIE 180

Query: 262 ELLNWNCPLPSTSS 276
           ELLNWNCPLPS SS
Sbjct: 181 ELLNWNCPLPSISS 190

[Close]

BLAST of Moc11g05460.1 vs. ExPASy TrEMBL
Match: A0A6J1IGA2 (ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476664 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.4e-92
Identity = 177/200 (88.50%), Postives = 182/200 (91.00%), Query Frame = 0


Query: 78  LSIVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQ 137
           +S VMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQ
Sbjct: 2   VSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQ 61

Query: 138 NAKTNFPASKNQAEEGR--HGDGSSPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDN 197
           NAKTNFPASK+Q+ E    HG GSSP++PKALSELLSTKLRKCCKNPSPSLTCLRLDSDN
Sbjct: 62  NAKTNFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDN 121

Query: 198 AHIGVWQKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASGEADGHRNGIDEEDRI 257
           AHIGVWQKRAGTRA SNWVMRIELGKK    E PSP PS ES S EADGHRNGIDEEDRI
Sbjct: 122 AHIGVWQKRAGTRATSNWVMRIELGKK----EIPSPLPSPESTSQEADGHRNGIDEEDRI 181

Query: 258 AMQMIEELLNWNCPLPSTSS 276
           AMQMIEELLNWNCPLPS SS
Sbjct: 182 AMQMIEELLNWNCPLPSISS 197

[Close]

BLAST of Moc11g05460.1 vs. ExPASy TrEMBL
Match: A0A6J1IIU8 (ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476664 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 4.1e-92
Identity = 175/196 (89.29%), Postives = 179/196 (91.33%), Query Frame = 0


Query: 82  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 141
           MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT
Sbjct: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60

Query: 142 NFPASKNQAEEGR--HGDGSSPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 201
           NFPASK+Q+ E    HG GSSP++PKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG
Sbjct: 61  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 120

Query: 202 VWQKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASGEADGHRNGIDEEDRIAMQM 261
           VWQKRAGTRA SNWVMRIELGKK    E PSP PS ES S EADGHRNGIDEEDRIAMQM
Sbjct: 121 VWQKRAGTRATSNWVMRIELGKK----EIPSPLPSPESTSQEADGHRNGIDEEDRIAMQM 180

Query: 262 IEELLNWNCPLPSTSS 276
           IEELLNWNCPLPS SS
Sbjct: 181 IEELLNWNCPLPSISS 192

[Close]

BLAST of Moc11g05460.1 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 236.5 bits (602), Expect = 2.6e-62
Identity = 120/189 (63.49%), Postives = 149/189 (78.84%), Query Frame = 0


Query: 82  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 141
           MV+SRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTF+TAE AARAYDQAA+LMNGQNAKT
Sbjct: 1   MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT 60

Query: 142 NFPASKNQAEEGRHGDGSSPL-SPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGV 201
           NFP  K++       D +SPL SPK+LSELL+ KLRK CK+ +PSLTCLRLD+D++HIGV
Sbjct: 61  NFPVVKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGV 120

Query: 202 WQKRAGTRAASNWVMRIELGK--KETETETPSPSPSLESASGEADGHRNGIDEEDRIAMQ 261
           WQKRAG++ +  WVMR+ELG    E+  +    + + ++   E +     I +ED++AM+
Sbjct: 121 WQKRAGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDEDQLAME 180

Query: 262 MIEELLNWN 268
           MIEELLNW+
Sbjct: 181 MIEELLNWS 189

[Close]

BLAST of Moc11g05460.1 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 230.7 bits (587), Expect = 1.4e-60
Identity = 116/188 (61.70%), Postives = 141/188 (75.00%), Query Frame = 0


Query: 82  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 141
           MV+S+KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAE AARAYDQAA+LMNGQ+AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 142 NFPASKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVW 201
           NFP  K+          S+  SPK+LSELL+ KLRK CK+ +P LTCLRLD+D++HIGVW
Sbjct: 61  NFPVIKSNGSNSLE-INSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVW 120

Query: 202 QKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIE 261
           QKRAG++ + NWV  +ELG K       +  P  +  + +       + E+D++AMQMIE
Sbjct: 121 QKRAGSKTSPNWVKLVELGDK------VNARPGGDIETNKMKVRNEDVQEDDQMAMQMIE 180

Query: 262 ELLNWNCP 270
           ELLNW CP
Sbjct: 181 ELLNWTCP 181

[Close]

BLAST of Moc11g05460.1 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 223.8 bits (569), Expect = 1.7e-58
Identity = 115/199 (57.79%), Postives = 145/199 (72.86%), Query Frame = 0


Query: 82  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 141
           MV ++KFRGVRQR WGSWV+EIRHPLLKRR+WLGTF+TAE+AARAYD+AA+LM+G+NAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 142 NFPASKNQAEEGRHGDG--------SSPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDS 201
           NFP + N   E   G          SS  S  +LS +LS KLRKCCK+PSPSLTCLRLD+
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 202 DNAHIGVWQKRAGTRAASNWVMRIELGKKETETETPSPSPS----LESASGEADGHRNGI 261
            ++HIGVWQKRAG+++ S+WVM +ELG   +  ET S +        +   E  G R  +
Sbjct: 121 ASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSREEV 180

Query: 262 -DEEDRIAMQMIEELLNWN 268
            DEE+++A+QMIEELLN N
Sbjct: 181 LDEEEKVALQMIEELLNTN 199

[Close]

BLAST of Moc11g05460.1 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 219.5 bits (558), Expect = 3.2e-57
Identity = 113/188 (60.11%), Postives = 138/188 (73.40%), Query Frame = 0


Query: 82  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 141
           MV+S+KFRGVRQRQWGSWVSEIRHPLL   VWLGTFDTAE AARAYDQAA+LMNGQ+AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 142 NFPASKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVW 201
           NFP  K+          S+  SPK+LSELL+ KLRK CK+ +P LTCLRLD+D++HIGVW
Sbjct: 61  NFPVIKSNGSNSLE-INSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVW 120

Query: 202 QKRAGTRAASNWVMRIELGKKETETETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIE 261
           QKRAG++ + NWV  +ELG K       +  P  +  + +       + E+D++AMQMIE
Sbjct: 121 QKRAGSKTSPNWVKLVELGDK------VNARPGGDIETNKMKVRNEDVQEDDQMAMQMIE 178

Query: 262 ELLNWNCP 270
           ELLNW CP
Sbjct: 181 ELLNWTCP 178

[Close]

BLAST of Moc11g05460.1 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-25
Identity = 77/181 (42.54%), Postives = 96/181 (53.04%), Query Frame = 0


Query: 86  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPA 145
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAEDAARAYD+AA LM G  A+TNFP 
Sbjct: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65

Query: 146 SKNQAEEGRHGDGSSPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRA 205
           + N              S K LS  L+ KL KC       +  L++          Q   
Sbjct: 66  NPNAIPTS---------SSKLLSATLTAKLHKC------YMASLQMTKQTQTQTQTQTAR 125

Query: 206 GTRAASNWVMRIELGKKETETETPSPSPSLESASGEADGHRNGIDEEDRIAMQMIEELLN 265
              A S+ V   E       TET      ++   G A+  +N    E+    QMIEELL+
Sbjct: 126 SQSADSDGVTANESHLNRGVTET----TEIKWEDGNANMQQNFRPLEEDHIEQMIEELLH 167

Query: 266 W 267
           +
Sbjct: 186 Y 167

The following BLAST results are available for this feature:

BLAST of Moc11g05460.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134182.1	1.9e-147	100.00	ethylene-responsive transcription factor SHINE 2-like [Momordica charantia]	[more]
XP_038899928.1	4.8e-95	84.89	ethylene-responsive transcription factor SHINE 2-like isoform X1 [Benincasa hisp...	[more]
XP_038899931.1	1.8e-94	88.04	ethylene-responsive transcription factor SHINE 2-like isoform X3 [Benincasa hisp...	[more]
XP_038899930.1	6.9e-94	90.40	ethylene-responsive transcription factor SHINE 2-like isoform X2 [Benincasa hisp...	[more]
KAG6591574.1	3.4e-93	88.89	Ethylene-responsive transcription factor SHINE 3, partial [Cucurbita argyrosperm...	[more]

BLAST of Moc11g05460.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFN7	3.6e-61	63.49	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q3E958	2.0e-59	61.70	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9XI33	2.4e-57	57.79	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q94AW5	1.6e-24	42.54	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	2.4e-20	53.76	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]

BLAST of Moc11g05460.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYX9	9.0e-148	100.00	ethylene-responsive transcription factor SHINE 2-like OS=Momordica charantia OX=...	[more]
A0A6J1F8L5	1.7e-93	88.89	ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita moschat...	[more]
A0A6J1FE03	4.8e-93	89.69	ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita moschat...	[more]
A0A6J1IGA2	1.4e-92	88.50	ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita maxima ...	[more]
A0A6J1IIU8	4.1e-92	89.29	ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita maxima ...	[more]

BLAST of Moc11g05460.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11190.1	2.6e-62	63.49	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	1.4e-60	61.70	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	1.7e-58	57.79	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	3.2e-57	60.11	Integrase-type DNA-binding superfamily protein	[more]
AT5G25190.1	1.1e-25	42.54	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 110..126 score: 72.19 coord: 88..99 score: 60.91
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 87..150 e-value: 4.5E-40 score: 149.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 87..136 e-value: 7.0E-13 score: 48.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 87..144 score: 21.904358
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 87..146 e-value: 5.94353E-35 score: 118.528
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 86..146 e-value: 9.4E-27 score: 94.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..163
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 82..273
None	No IPR available	PANTHER	PTHR31194:SF13	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2	coord: 82..273
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 87..146

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc11g05460	Moc11g05460	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc11g05460.1.exon1	Moc11g05460.1.exon1	exon
Moc11g05460.1.exon2	Moc11g05460.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc11g05460.1	cds.Moc11g05460.1	CDS
cds.Moc11g05460.1	cds.Moc11g05460.1_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc11g05460.1	Moc11g05460.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity