Moc11g04000.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g04000.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Histone deacetylase
Location	chr11: 2592582 .. 2596462 (-)
Sequence length	1053
RNA-Seq Expression	Moc11g04000.1
Synteny	Moc11g04000.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCTTCTTCATCGCCTGAGAATGGGAACGATCCGGAAACTGCCCGAAGAGACCGAATTCTCTCCACCAAGCTGTATTTTGATGTCCCTTCTTCAAAGGTACTGGAATTCATATGCTTAATCCCAGTCTGCATATAAGCTGGCTGCTTCTAGGTGTCGCCTGTACCCATGTGTATTTCTGGATTTTGGTGAAAACAGGTGCCGGTTATTTATTCGTCGTCGTACGACATCTCATTTCTTGGAATAGAGAAGTTGTAAGTAACTGCTGCTTAATTGCTTGTACTACTGTATTTTAGTTTAAAACTCATTGAGTATGGTGTTTGATTGATTGGTAGATATCTTTTGCTTGTTCTTCTCTTTCCTGCTTTCTTTGTGTTCTCGATCACGTGAAATCAGGATTTATGGGAATTCCGTTCCGTTTCTTTCATAGTGAACGGATGCTGTTGAACATGCTGGGAATGCCTTTTAGTTTCAGTTCTTTTCTTCTGATCAATCTGTATTAGTATCTTGCGTCCGTTTAAGGAGTTCGAAGACAATTTTAGTTGGCTTTTCTTAAAAACTCTATTTTATTTAGTTGGTAAGTAGTTAGTGGGAAATCGTGCCTGTAGGCATCCATTTGATTCGAAGAAATGGCGTCGCGTGTGCCAATTCCTTGTTGCTGCTGGAGTTTTGAGGAAAGATCAAATTGTCGAGCCTTTGGAAGCTAAGAAGAATGATCTTCTTGTTGTACGTTTTCAGATTCCACCTTTTGTGTTAACATTTGCGCTCCCTCTCTCTCTTTGTCCATGAATCCTCAAATTACAAAATTCATGAACTCGCAGTGCCACTATTTATTTGAAATATCATTGGAAAATCCTATCTTGGTAATTGTTGTTTATGTAGTAAGACTAAACTGACACATTCACAAATTTTAGAAATTCAACAATGATGCATCTTCTCTCTGGTAATATTTGATCAGGTACATCCCCAATCATACTTGGATAGTCTGAAGAACAGTTTAAATGTTGCAAAGATCATTGAGGTATTGAATCTTATATCCCCTTGCTCTGTGAATCATTTTAGTTGCACTTTTATTATAATTTGGCTTAGTTAAACATTATCTGCCGTGAAGGTAACTAGTTATTCGTTTCTTCTAGGAAGTGGGATTTTAGTCTTATGGTACAAGTCACAGGCATACTCTTTTAGAACTTTAAGTCGAAGTTCCCTTTTCAAATGCTTTTCAAAAACATGGTGAGAATTGTAATGTGTGAAACCTGGAGATGTTTCATTTTTTGGAGATTGACAGTTATATTTATTCATTAACTGATTCAGTTGCAGGTTGTAGTCTTTTAACTTTGACTGATCTGAACTACTACAATATAGGTCCCTCCCGTTGCAGTGTTTCCTCATTGTATTGTGAAGAATAAAGTTCAACGCCCATTTCGTAACCAGGTGAACTGTGGTTCATCTCAAACTCTTTTTCTCTCCCTTTTTCCATGTTAATTAAGTTTAAAATGGGTTGTAATTTTTGCTGTATGCTGCTGCAGGTTGGAGGAACTATATTAGCTGCAAAACTAGCAAAAGAGAGGGGATGGGCCATCAATGTAGGAGGTGGCTTTCACCACTGTTCAGCAGAACTAGGAGGGGGGTTTTGTGTGTATGCAGATATTTCTCTGTGCATTCACTATGCCTTTGTTCAGTTAAATATATCAAGGTACACTGTACATAGAGTTGCACCATGATGACCTAAACGAACTCATACAGAGTTGAGTTTAGTTTCACATCAATTACTTGTAGTAATTAACCCTTATCCTTGTGATATGCGACATTTGCAGGGTAATGATTATTGATCTTGATGCCCATCAAGGAAATGGCCATGAAATGGATTTTGCCCATGATAGTATGGCAATTCAATTTTTCGGTAATAGCTTTCAACTAGCTCTCTTTCGGAATGCTAATGTTTTATTTGTACTAGCAGGACGGGTATATATTCTTGATATGTTCAATCCTGGAATATATCCATTTGTAAGTTACACTGATATTCCTTGCAGCATCTCTGAATGAAATTATTGATTTTGCTGTTCTTTGTTTGCCCTTGTGTTAGTTTTTCTAGAGCTGCTAAGGCAACACAGTTTCCTATTTCCATCACATTTTCAAATTCTCTATTACCACTGTACTCGAGCATAAAAGTTTTGGATGACTCTCTCCCTTTGTGTATGTGTCGTATCTCAGGATTATGAGGCAAGGAGATGCATTGATCAGAAAGTTGAAGTAGATGTAAGTAATGCTTGTTATGGAGATAAATTTTGTTTGTTTCTCTTCTTGCCCGCATGTTACATGGGTACATTTTCTATTGCAGAGTGGGACCAAAACAAGCGAATACTTGAAGAAATTAGAAGAAGCACTTGAGGTAGCTTTTCTTGCAGTTCATTTTTTAATTTAATTGCTTATATAGTTAACTTCTTTGTGATTTTGAAACTTTTCTTTTTGCCTTGTACCTTTTGAGGTTTACAAGTCTGGTGCAACAGAGTCATCCCCTCCCACACTCTGCATCTGAAGTTTATAACATTTGGTGTTGGGGAATGAGCAATCTTAATTTGTTACGAACTCTCTGCTAATTTTCACCATGTTAATGTTAGATTGCTGCCACTTCGTATGATCCAGACTTGATTGTTTACAATGCTGGGACTGATATTCTAGATGGAGATCCTCTGGGCTTGTTAAAGGTAACTAACTCTGTCCCCAAATTAGTTCTGCAAGAAGTTGGTTTCTCCTTTCTCGCTTGCTGGTTCTAGCAAAAAGTTAGTCAGTTGTCTTGTTGGCTTATATACACAGTAATGTGCAGATTAGTGCTGGCGGAATAGCTATGAGAGATGAAAAGGTTTTCAAATTTGCTCGAACGAGGAACATTCCCATTGTCATGCTGACATCAGGTCTCTTTCCCTTGCATGAGCATGTCAATGCGATGAATGAAGTTTATATAGTTATGACAAGATATAGAATATGCTCCTTTTTAATCATGTTTGACCTTTCTCTCTTGTAAAAGATAAAAAGTACACTCATCCTTCCCTTTTTATTTCATACTAACTTTGAACTCTTTGACCAAGTGGTAAATTATCTCATTGGACCCTTTTTATTTTCATATGTTAAATAATTACTACATACCATTTTTATTTAAAATCTCTTCTATCTAAACAACACTTTACATCTTTCTTCTTTTCATTCATCTTCAATCTTCATATTGCGAGGTATGTTTATCCTGCTACGTTAAAGTTAATTTCATTATAGTACCATTTTTTGCATTACCAAAATCATAAGTTTGGGTGGTATCTGGAGATTTAAATGAGGAAGAGTATGAATGTAACATTTTTTGTCAACGAGAATTATTTTCTTGTCAACAATATAACCTATCTTGGTACTATGGAACTTTTTTCTCGATCATGAGAAAAATGTTATCATGAAGCGTAGTTCTTGTGGATCGGCAAAAGTCTTGGTGAATCTGTAAAGATAATAATTTGTTCTTGAAACCTTAGGAATGGAATTAAGAGAGCTGGTATGATAAGAAACTGCTCAAATAATAGAGGATATTTTTACCATTTCATACTTCACTTCAATGAATCAACTTTATCATATTTAAGAAAACATCCCATTTTCCAATTTTAATTTAAATGTGGTTTTTTAAAATAAAAACTCTATTAAAAATGTAGATGAAATATATGTGGTGACCTTGATTTGTTGCTATCTTCATTATAGTCTCTTGGAGTAATTTTTATTAACAGATAATTTTCAAAATTCCATTTTCAGGTGGTTACATGAAATCTAGCGCCAAAGTCATAGCTGATTCAATCGAAAATCTCTCGAAGCAGAGTTTAATCGATACAGGAAGCTCTCCGGGCTGA

mRNA sequence

ATGTCGTCTTCTTCATCGCCTGAGAATGGGAACGATCCGGAAACTGCCCGAAGAGACCGAATTCTCTCCACCAAGCTGTATTTTGATGTCCCTTCTTCAAAGGTGCCGGTTATTTATTCGTCGTCGTACGACATCTCATTTCTTGGAATAGAGAAGTTGCATCCATTTGATTCGAAGAAATGGCGTCGCGTGTGCCAATTCCTTGTTGCTGCTGGAGTTTTGAGGAAAGATCAAATTGTCGAGCCTTTGGAAGCTAAGAAGAATGATCTTCTTGTTGTACATCCCCAATCATACTTGGATAGTCTGAAGAACAGTTTAAATGTTGCAAAGATCATTGAGGTCCCTCCCGTTGCAGTGTTTCCTCATTGTATTGTGAAGAATAAAGTTCAACGCCCATTTCGTAACCAGGTTGGAGGAACTATATTAGCTGCAAAACTAGCAAAAGAGAGGGGATGGGCCATCAATGTAGGAGGTGGCTTTCACCACTGTTCAGCAGAACTAGGAGGGGGGTTTTGTGTGTATGCAGATATTTCTCTGTGCATTCACTATGCCTTTGTTCAGTTAAATATATCAAGGGTAATGATTATTGATCTTGATGCCCATCAAGGAAATGGCCATGAAATGGATTTTGCCCATGATAGACGGGTATATATTCTTGATATGTTCAATCCTGGAATATATCCATTTGATTATGAGGCAAGGAGATGCATTGATCAGAAAGTTGAAGTAGATAGTGGGACCAAAACAAGCGAATACTTGAAGAAATTAGAAGAAGCACTTGAGATTGCTGCCACTTCGTATGATCCAGACTTGATTGTTTACAATGCTGGGACTGATATTCTAGATGGAGATCCTCTGGGCTTGTTAAAGATTAGTGCTGGCGGAATAGCTATGAGAGATGAAAAGGTTTTCAAATTTGCTCGAACGAGGAACATTCCCATTGTCATGCTGACATCAGGTGGTTACATGAAATCTAGCGCCAAAGTCATAGCTGATTCAATCGAAAATCTCTCGAAGCAGAGTTTAATCGATACAGGAAGCTCTCCGGGCTGA

Coding sequence (CDS)

ATGTCGTCTTCTTCATCGCCTGAGAATGGGAACGATCCGGAAACTGCCCGAAGAGACCGAATTCTCTCCACCAAGCTGTATTTTGATGTCCCTTCTTCAAAGGTGCCGGTTATTTATTCGTCGTCGTACGACATCTCATTTCTTGGAATAGAGAAGTTGCATCCATTTGATTCGAAGAAATGGCGTCGCGTGTGCCAATTCCTTGTTGCTGCTGGAGTTTTGAGGAAAGATCAAATTGTCGAGCCTTTGGAAGCTAAGAAGAATGATCTTCTTGTTGTACATCCCCAATCATACTTGGATAGTCTGAAGAACAGTTTAAATGTTGCAAAGATCATTGAGGTCCCTCCCGTTGCAGTGTTTCCTCATTGTATTGTGAAGAATAAAGTTCAACGCCCATTTCGTAACCAGGTTGGAGGAACTATATTAGCTGCAAAACTAGCAAAAGAGAGGGGATGGGCCATCAATGTAGGAGGTGGCTTTCACCACTGTTCAGCAGAACTAGGAGGGGGGTTTTGTGTGTATGCAGATATTTCTCTGTGCATTCACTATGCCTTTGTTCAGTTAAATATATCAAGGGTAATGATTATTGATCTTGATGCCCATCAAGGAAATGGCCATGAAATGGATTTTGCCCATGATAGACGGGTATATATTCTTGATATGTTCAATCCTGGAATATATCCATTTGATTATGAGGCAAGGAGATGCATTGATCAGAAAGTTGAAGTAGATAGTGGGACCAAAACAAGCGAATACTTGAAGAAATTAGAAGAAGCACTTGAGATTGCTGCCACTTCGTATGATCCAGACTTGATTGTTTACAATGCTGGGACTGATATTCTAGATGGAGATCCTCTGGGCTTGTTAAAGATTAGTGCTGGCGGAATAGCTATGAGAGATGAAAAGGTTTTCAAATTTGCTCGAACGAGGAACATTCCCATTGTCATGCTGACATCAGGTGGTTACATGAAATCTAGCGCCAAAGTCATAGCTGATTCAATCGAAAATCTCTCGAAGCAGAGTTTAATCGATACAGGAAGCTCTCCGGGCTGA

Protein sequence

MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKKWRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVFPHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQKVEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRDEKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDTGSSPG

Homology

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BLAST of Moc11g04000.1 vs. NCBI nr
Match: XP_022140219.1 (histone deacetylase 2 isoform X2 [Momordica charantia])

HSP 1 Score: 701.0 bits (1808), Expect = 5.0e-198
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0


Query: 1   MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60
           MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK
Sbjct: 1   MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60

Query: 61  WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF 120
           WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF
Sbjct: 61  WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF 120

Query: 121 PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC 180
           PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC
Sbjct: 121 PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC 180

Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 240
           IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK
Sbjct: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 240

Query: 241 VEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRD 300
           VEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRD
Sbjct: 241 VEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRD 300

Query: 301 EKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDTGSSPG 351
           EKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDTGSSPG
Sbjct: 301 EKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDTGSSPG 350

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BLAST of Moc11g04000.1 vs. NCBI nr
Match: XP_022140202.1 (histone deacetylase 2 isoform X1 [Momordica charantia] >XP_022140210.1 histone deacetylase 2 isoform X1 [Momordica charantia])

HSP 1 Score: 684.5 bits (1765), Expect = 4.8e-193
Identity = 349/376 (92.82%), Postives = 349/376 (92.82%), Query Frame = 0


Query: 1   MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60
           MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK
Sbjct: 1   MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60

Query: 61  WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF 120
           WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF
Sbjct: 61  WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF 120

Query: 121 PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC 180
           PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC
Sbjct: 121 PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC 180

Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDR-------------------------- 240
           IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHD                           
Sbjct: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDSMAIQFFGNSFQLALFRNANVLFVLAG 240

Query: 241 RVYILDMFNPGIYPFDYEARRCIDQKVEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVY 300
           RVYILDMFNPGIYPFDYEARRCIDQKVEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVY
Sbjct: 241 RVYILDMFNPGIYPFDYEARRCIDQKVEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVY 300

Query: 301 NAGTDILDGDPLGLLKISAGGIAMRDEKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSI 351
           NAGTDILDGDPLGLLKISAGGIAMRDEKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSI
Sbjct: 301 NAGTDILDGDPLGLLKISAGGIAMRDEKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSI 360

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BLAST of Moc11g04000.1 vs. NCBI nr
Match: XP_008452709.1 (PREDICTED: histone deacetylase 2 [Cucumis melo] >KAA0064492.1 histone deacetylase 2 [Cucumis melo var. makuwa] >TYK20098.1 histone deacetylase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 636.3 bits (1640), Expect = 1.5e-178
Identity = 317/349 (90.83%), Postives = 332/349 (95.13%), Query Frame = 0


Query: 1   MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60
           MSSS SP N N+ ET RRDRILS+KLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK
Sbjct: 1   MSSSLSP-NANNGETVRRDRILSSKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60

Query: 61  WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF 120
           W RVCQFL+AAGVLRKDQI+EPLEAKKNDLLVVHP+SYL+SLKNS NVAKIIEVPPVA+F
Sbjct: 61  WGRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALF 120

Query: 121 PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC 180
           PHC+VK KVQRPFRNQVGG+ILA K+AKE+GWAINVGGGFHHCSAE GGGFCVYADISLC
Sbjct: 121 PHCVVKEKVQRPFRNQVGGSILAGKVAKEKGWAINVGGGFHHCSAEQGGGFCVYADISLC 180

Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 240
           IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK
Sbjct: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 240

Query: 241 VEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRD 300
           VEV SGT TSEYLKKL+EALE+AATSYDP+LIVYNAGTDILDGDPLGLLKISA GIA RD
Sbjct: 241 VEVVSGTTTSEYLKKLDEALEVAATSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRD 300

Query: 301 EKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDTGSSP 350
           EKVF+FAR RNIPIVMLTSGGYMKSSAKVIADSIENLSKQ LIDT SSP
Sbjct: 301 EKVFRFARARNIPIVMLTSGGYMKSSAKVIADSIENLSKQRLIDTESSP 348

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BLAST of Moc11g04000.1 vs. NCBI nr
Match: XP_038899967.1 (histone deacetylase 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 634.4 bits (1635), Expect = 5.7e-178
Identity = 315/350 (90.00%), Postives = 332/350 (94.86%), Query Frame = 0


Query: 1   MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60
           MSSS SP N ND ET RRDRILS+KLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK
Sbjct: 1   MSSSLSP-NANDGETVRRDRILSSKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60

Query: 61  WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF 120
           W RVCQFL+AAGVLRKDQI+EP EAKKNDLLVVH +SYLDSLKNS NVAKIIEVPPVA+F
Sbjct: 61  WGRVCQFLIAAGVLRKDQIIEPFEAKKNDLLVVHSESYLDSLKNSSNVAKIIEVPPVALF 120

Query: 121 PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC 180
           PHC+V+ KVQRPFRNQVGG+ILA K+AKERGWAINVGGGFHHCSAE GGGFCVYADISLC
Sbjct: 121 PHCVVEEKVQRPFRNQVGGSILAGKVAKERGWAINVGGGFHHCSAEQGGGFCVYADISLC 180

Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 240
           IHYAFVQLNISRVMI+DLDAHQGNGHEMDFA+DRRVYILDMFNPGIYPFD+EARRCIDQK
Sbjct: 181 IHYAFVQLNISRVMIVDLDAHQGNGHEMDFAYDRRVYILDMFNPGIYPFDHEARRCIDQK 240

Query: 241 VEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRD 300
           VEV SGT TSEYLKKL+EALE+AATSYDP+LIVYNAGTDILDGDPLGLLKISA GIA RD
Sbjct: 241 VEVVSGTTTSEYLKKLDEALEVAATSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRD 300

Query: 301 EKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDTGSSPG 351
           EKVF+FAR RN+PIVMLTSGGYMKSSAKVIADSIENLSKQSLIDT SSPG
Sbjct: 301 EKVFRFARARNVPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDTESSPG 349

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BLAST of Moc11g04000.1 vs. NCBI nr
Match: XP_004141312.1 (histone deacetylase 2 isoform X2 [Cucumis sativus] >KGN55325.1 hypothetical protein Csa_012457 [Cucumis sativus])

HSP 1 Score: 630.9 bits (1626), Expect = 6.4e-177
Identity = 313/349 (89.68%), Postives = 330/349 (94.56%), Query Frame = 0


Query: 1   MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60
           MSSS SP+  ND E  RRDRILS+KLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK
Sbjct: 1   MSSSLSPD-ANDGEAVRRDRILSSKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60

Query: 61  WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF 120
           W RVCQFL+AAGVLRKDQI++PLEAKKNDLLVVHP+SYL+SLKNS NVAKIIEVPPVA+F
Sbjct: 61  WGRVCQFLIAAGVLRKDQIIKPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALF 120

Query: 121 PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC 180
           PHC+VK KVQRPFRNQVGG+ILA K+AKE+GWAINVGGGFHHCSAE GGGFCVYADISLC
Sbjct: 121 PHCVVKEKVQRPFRNQVGGSILAGKVAKEKGWAINVGGGFHHCSAERGGGFCVYADISLC 180

Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 240
           IHYAFVQLNIS+ MIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK
Sbjct: 181 IHYAFVQLNISKAMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 240

Query: 241 VEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRD 300
           VEV SGT TSEYLKKL+EALE+AATSYDP+LIVYNAGTDILDGDPLGLLKISA GIA RD
Sbjct: 241 VEVVSGTTTSEYLKKLDEALEVAATSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRD 300

Query: 301 EKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDTGSSP 350
           EKVF+FAR RNIPIVMLTSGGYMKSSAKVIADSIENLSKQ LIDT SSP
Sbjct: 301 EKVFRFARARNIPIVMLTSGGYMKSSAKVIADSIENLSKQRLIDTESSP 348

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BLAST of Moc11g04000.1 vs. ExPASy Swiss-Prot
Match: Q944K3 (Histone deacetylase 2 OS=Arabidopsis thaliana OX=3702 GN=HDA2 PE=2 SV=2)

HSP 1 Score: 508.8 bits (1309), Expect = 4.8e-143
Identity = 251/344 (72.97%), Postives = 288/344 (83.72%), Query Frame = 0


Query: 2   SSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKKW 61
           S  SS      PE  RR+RIL++KLYFDVP SKV +IYSSSYDISF+GIEKLHPFDS KW
Sbjct: 41  SEISSFSMATHPEALRRERILNSKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKW 100

Query: 62  RRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVFP 121
            RVC+FLV+ G L +  IVEPLEA K DLLVVH ++YL+SLK+S  VA+I EV PVA FP
Sbjct: 101 GRVCKFLVSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITEVAPVAFFP 160

Query: 122 HCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLCI 181
           + +V+ KV  PFR QVGGTILAAKLA ERGWAIN+GGGFHHC+AE GGGFC +ADISLCI
Sbjct: 161 NFLVQQKVLYPFRKQVGGTILAAKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCI 220

Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQKV 241
           H+AF++L ISRVMIIDLDAHQGNGHE D   D RVYILDM+NP IYPFDY ARR IDQKV
Sbjct: 221 HFAFLRLRISRVMIIDLDAHQGNGHETDLGDDNRVYILDMYNPEIYPFDYRARRFIDQKV 280

Query: 242 EVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRDE 301
           EV SGT T EYL+KL+EALE+A+ ++ P+L++YNAGTDILDGDPLGLLKIS  GI  RDE
Sbjct: 281 EVMSGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDE 340

Query: 302 KVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDT 346
           KVF+FAR +NIP+VMLTSGGYMKSSA+VIADSIENLS+Q LI T
Sbjct: 341 KVFRFAREKNIPLVMLTSGGYMKSSARVIADSIENLSRQGLIQT 384

[Close]

BLAST of Moc11g04000.1 vs. ExPASy Swiss-Prot
Match: Q9GKU5 (Histone deacetylase 11 OS=Macaca fascicularis OX=9541 GN=HDAC11 PE=2 SV=2)

HSP 1 Score: 360.1 bits (923), Expect = 2.7e-98
Identity = 179/322 (55.59%), Postives = 232/322 (72.05%), Query Frame = 0


Query: 23  STKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKKWRRVCQFLVAAGVLRKDQIVEP 82
           +T+LY  VP ++ P++YS  Y+I+F+G+EKLHPFD+ KW +V  FL    +L    +VE 
Sbjct: 4   TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63

Query: 83  LEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVFPHCIVKNKVQRPFRNQVGGTIL 142
            EA + DLLVVH + YL+ LK S  VA I E+PPV   P+ +V+ KV RP R Q GGTI+
Sbjct: 64  REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123

Query: 143 AAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLCIHYAFVQL-NISRVMIIDLDAH 202
           A KLA ERGWAINVGGGFHHCS++ GGGFC YADI+L I + F ++  ISR  IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183

Query: 203 QGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQKVEVDSGTKTSEYLKKLEEALE 262
           QGNGHE DF  D+RVYI+D++N  IYP D  A++ I +KVE++ GT+  EYL K+E  +E
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIE 243

Query: 263 IAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRDEKVFKFARTRNIPIVMLTSGG 322
            +   + PD++VYNAGTDIL+GD LG L IS  GI  RDE VF+  R R++PI+M+TSGG
Sbjct: 244 KSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRHVPILMVTSGG 303

Query: 323 YMKSSAKVIADSIENLSKQSLI 344
           Y K +A++IADSI NL    LI
Sbjct: 304 YQKRTARIIADSILNLFGLGLI 325

[Close]

BLAST of Moc11g04000.1 vs. ExPASy Swiss-Prot
Match: Q96DB2 (Histone deacetylase 11 OS=Homo sapiens OX=9606 GN=HDAC11 PE=1 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 1.0e-97
Identity = 178/322 (55.28%), Postives = 231/322 (71.74%), Query Frame = 0


Query: 23  STKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKKWRRVCQFLVAAGVLRKDQIVEP 82
           +T+LY  VP ++ P++YS  Y+I+F+G+EKLHPFD+ KW +V  FL    +L    +VE 
Sbjct: 4   TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63

Query: 83  LEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVFPHCIVKNKVQRPFRNQVGGTIL 142
            EA + DLLVVH + YL+ LK S  VA I E+PPV   P+ +V+ KV RP R Q GGTI+
Sbjct: 64  REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123

Query: 143 AAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLCIHYAFVQL-NISRVMIIDLDAH 202
           A KLA ERGWAINVGGGFHHCS++ GGGFC YADI+L I + F ++  ISR  IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183

Query: 203 QGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQKVEVDSGTKTSEYLKKLEEALE 262
           QGNGHE DF  D+RVYI+D++N  IYP D  A++ I +KVE++ GT+  EYL K+E  ++
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIK 243

Query: 263 IAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRDEKVFKFARTRNIPIVMLTSGG 322
            +   + PD++VYNAGTDIL+GD LG L IS  GI  RDE VF+  R R +PI+M+TSGG
Sbjct: 244 KSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGG 303

Query: 323 YMKSSAKVIADSIENLSKQSLI 344
           Y K +A++IADSI NL    LI
Sbjct: 304 YQKRTARIIADSILNLFGLGLI 325

[Close]

BLAST of Moc11g04000.1 vs. ExPASy Swiss-Prot
Match: Q91WA3 (Histone deacetylase 11 OS=Mus musculus OX=10090 GN=Hdac11 PE=1 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 5.2e-97
Identity = 177/322 (54.97%), Postives = 229/322 (71.12%), Query Frame = 0


Query: 23  STKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKKWRRVCQFLVAAGVLRKDQIVEP 82
           +T+LY  VP  + P++YS  Y+I+F+G+EKLHPFD+ KW +V  FL    +L    +VE 
Sbjct: 4   ATQLYQHVPEKRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEA 63

Query: 83  LEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVFPHCIVKNKVQRPFRNQVGGTIL 142
            EA + DLLVVH + YL+ LK S  VA I E+PPV   P+ +V+ KV RP R Q GGTI+
Sbjct: 64  REASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123

Query: 143 AAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLCIHYAFVQL-NISRVMIIDLDAH 202
           A KLA ERGWAINVGGGFHHCS++ GGGFC YADI+L I + F ++  ISR  IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183

Query: 203 QGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQKVEVDSGTKTSEYLKKLEEALE 262
           QGNGHE DF  D+RVYI+D++N  IYP D  A+  I +KVE++ GT+  EYL+K+E  + 
Sbjct: 184 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKEAIRRKVELEWGTEDEEYLEKVERNVR 243

Query: 263 IAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRDEKVFKFARTRNIPIVMLTSGG 322
            +   + PD++VYNAGTD+L+GD LG L IS  GI  RDE VF+  R  +IPI+M+TSGG
Sbjct: 244 RSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFRVVRAHDIPILMVTSGG 303

Query: 323 YMKSSAKVIADSIENLSKQSLI 344
           Y K +A++IADSI NL    LI
Sbjct: 304 YQKRTARIIADSILNLHDLGLI 325

[Close]

BLAST of Moc11g04000.1 vs. ExPASy Swiss-Prot
Match: P28606 (Uncharacterized protein SYNPCC7002_A1628 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=SYNPCC7002_A1628 PE=3 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 2.1e-26
Identity = 88/293 (30.03%), Postives = 130/293 (44.37%), Query Frame = 0


Query: 36  PVIYSSSYDISFLGIEKLHPFDSKKWRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHP 95
           PV+Y   Y      I + H F   K+R +   L+  GV++ +Q+ +P    +  L +VH 
Sbjct: 4   PVVYHPDY---VTPIPEEHRFPMPKFRLLHGLLLEDGVIQPEQVYQPQLPDRAWLELVHE 63

Query: 96  QSYLDSLKNSLNVAKI---IEVPPVAVFPHCIVKNKVQRPFRNQVGGTILAAKLAKERGW 155
             Y+ +        K    I +P  A          VQR     VGGTIL A+LA E G 
Sbjct: 64  PDYVTAYCQGTLTPKAQRRIGLPWSA--------GVVQRTL-TAVGGTILTAQLALEHGL 123

Query: 156 AINVGGGFHHCSAELGGGFCVYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEMDFAH 215
           A N  GG HH     G GFC+  D+++       +    R++I+DLD HQG+G    F  
Sbjct: 124 ACNTAGGTHHAFPGYGSGFCILNDLAIATRTIQQRGLAQRILIVDLDVHQGDGTAFIFQD 183

Query: 216 DRRVYILDMFNPGIYPFDYEARRCIDQKVEVDSGTKTSEYLKKLEEALEIAATSYDPDLI 275
           D  V+   M     +P     ++  D  + +  G     YL+ L   LE   +   PDL+
Sbjct: 184 DPTVFTFSMHCEVNFP---SQKQRSDLDLGLPEGLDDDGYLQILAHHLEDLLSQVKPDLV 243

Query: 276 VYNAGTDILDGDPLGLLKISAGGIAMRDEKVFKFARTRNIPIVMLTSGGYMKS 326
            Y+AG D   GD LG L ++  G+  R+  V         P+  +  GGY K+
Sbjct: 244 FYDAGVDTHVGDRLGKLAMTNTGLYRRERLVLSTCLAAGYPVACVIGGGYAKN 281

[Close]

BLAST of Moc11g04000.1 vs. ExPASy TrEMBL
Match: A0A6J1CF45 (Histone deacetylase OS=Momordica charantia OX=3673 GN=LOC111010925 PE=4 SV=1)

HSP 1 Score: 701.0 bits (1808), Expect = 2.4e-198
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0


Query: 1   MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60
           MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK
Sbjct: 1   MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60

Query: 61  WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF 120
           WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF
Sbjct: 61  WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF 120

Query: 121 PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC 180
           PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC
Sbjct: 121 PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC 180

Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 240
           IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK
Sbjct: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 240

Query: 241 VEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRD 300
           VEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRD
Sbjct: 241 VEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRD 300

Query: 301 EKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDTGSSPG 351
           EKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDTGSSPG
Sbjct: 301 EKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDTGSSPG 350

[Close]

BLAST of Moc11g04000.1 vs. ExPASy TrEMBL
Match: A0A6J1CG62 (Histone deacetylase OS=Momordica charantia OX=3673 GN=LOC111010925 PE=4 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 2.3e-193
Identity = 349/376 (92.82%), Postives = 349/376 (92.82%), Query Frame = 0


Query: 1   MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60
           MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK
Sbjct: 1   MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60

Query: 61  WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF 120
           WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF
Sbjct: 61  WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF 120

Query: 121 PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC 180
           PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC
Sbjct: 121 PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC 180

Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDR-------------------------- 240
           IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHD                           
Sbjct: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDSMAIQFFGNSFQLALFRNANVLFVLAG 240

Query: 241 RVYILDMFNPGIYPFDYEARRCIDQKVEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVY 300
           RVYILDMFNPGIYPFDYEARRCIDQKVEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVY
Sbjct: 241 RVYILDMFNPGIYPFDYEARRCIDQKVEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVY 300

Query: 301 NAGTDILDGDPLGLLKISAGGIAMRDEKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSI 351
           NAGTDILDGDPLGLLKISAGGIAMRDEKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSI
Sbjct: 301 NAGTDILDGDPLGLLKISAGGIAMRDEKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSI 360

[Close]

BLAST of Moc11g04000.1 vs. ExPASy TrEMBL
Match: A0A5D3D9B1 (Histone deacetylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002220 PE=4 SV=1)

HSP 1 Score: 636.3 bits (1640), Expect = 7.3e-179
Identity = 317/349 (90.83%), Postives = 332/349 (95.13%), Query Frame = 0


Query: 1   MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60
           MSSS SP N N+ ET RRDRILS+KLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK
Sbjct: 1   MSSSLSP-NANNGETVRRDRILSSKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60

Query: 61  WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF 120
           W RVCQFL+AAGVLRKDQI+EPLEAKKNDLLVVHP+SYL+SLKNS NVAKIIEVPPVA+F
Sbjct: 61  WGRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALF 120

Query: 121 PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC 180
           PHC+VK KVQRPFRNQVGG+ILA K+AKE+GWAINVGGGFHHCSAE GGGFCVYADISLC
Sbjct: 121 PHCVVKEKVQRPFRNQVGGSILAGKVAKEKGWAINVGGGFHHCSAEQGGGFCVYADISLC 180

Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 240
           IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK
Sbjct: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 240

Query: 241 VEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRD 300
           VEV SGT TSEYLKKL+EALE+AATSYDP+LIVYNAGTDILDGDPLGLLKISA GIA RD
Sbjct: 241 VEVVSGTTTSEYLKKLDEALEVAATSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRD 300

Query: 301 EKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDTGSSP 350
           EKVF+FAR RNIPIVMLTSGGYMKSSAKVIADSIENLSKQ LIDT SSP
Sbjct: 301 EKVFRFARARNIPIVMLTSGGYMKSSAKVIADSIENLSKQRLIDTESSP 348

[Close]

BLAST of Moc11g04000.1 vs. ExPASy TrEMBL
Match: A0A1S3BUF6 (Histone deacetylase OS=Cucumis melo OX=3656 GN=LOC103493650 PE=4 SV=1)

HSP 1 Score: 636.3 bits (1640), Expect = 7.3e-179
Identity = 317/349 (90.83%), Postives = 332/349 (95.13%), Query Frame = 0


Query: 1   MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60
           MSSS SP N N+ ET RRDRILS+KLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK
Sbjct: 1   MSSSLSP-NANNGETVRRDRILSSKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60

Query: 61  WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF 120
           W RVCQFL+AAGVLRKDQI+EPLEAKKNDLLVVHP+SYL+SLKNS NVAKIIEVPPVA+F
Sbjct: 61  WGRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALF 120

Query: 121 PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC 180
           PHC+VK KVQRPFRNQVGG+ILA K+AKE+GWAINVGGGFHHCSAE GGGFCVYADISLC
Sbjct: 121 PHCVVKEKVQRPFRNQVGGSILAGKVAKEKGWAINVGGGFHHCSAEQGGGFCVYADISLC 180

Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 240
           IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK
Sbjct: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 240

Query: 241 VEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRD 300
           VEV SGT TSEYLKKL+EALE+AATSYDP+LIVYNAGTDILDGDPLGLLKISA GIA RD
Sbjct: 241 VEVVSGTTTSEYLKKLDEALEVAATSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRD 300

Query: 301 EKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDTGSSP 350
           EKVF+FAR RNIPIVMLTSGGYMKSSAKVIADSIENLSKQ LIDT SSP
Sbjct: 301 EKVFRFARARNIPIVMLTSGGYMKSSAKVIADSIENLSKQRLIDTESSP 348

[Close]

BLAST of Moc11g04000.1 vs. ExPASy TrEMBL
Match: A0A0A0L030 (Histone deacetylase OS=Cucumis sativus OX=3659 GN=Csa_4G645990 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 3.1e-177
Identity = 313/349 (89.68%), Postives = 330/349 (94.56%), Query Frame = 0


Query: 1   MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60
           MSSS SP+  ND E  RRDRILS+KLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK
Sbjct: 1   MSSSLSPD-ANDGEAVRRDRILSSKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60

Query: 61  WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF 120
           W RVCQFL+AAGVLRKDQI++PLEAKKNDLLVVHP+SYL+SLKNS NVAKIIEVPPVA+F
Sbjct: 61  WGRVCQFLIAAGVLRKDQIIKPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALF 120

Query: 121 PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC 180
           PHC+VK KVQRPFRNQVGG+ILA K+AKE+GWAINVGGGFHHCSAE GGGFCVYADISLC
Sbjct: 121 PHCVVKEKVQRPFRNQVGGSILAGKVAKEKGWAINVGGGFHHCSAERGGGFCVYADISLC 180

Query: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 240
           IHYAFVQLNIS+ MIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK
Sbjct: 181 IHYAFVQLNISKAMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 240

Query: 241 VEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRD 300
           VEV SGT TSEYLKKL+EALE+AATSYDP+LIVYNAGTDILDGDPLGLLKISA GIA RD
Sbjct: 241 VEVVSGTTTSEYLKKLDEALEVAATSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRD 300

Query: 301 EKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDTGSSP 350
           EKVF+FAR RNIPIVMLTSGGYMKSSAKVIADSIENLSKQ LIDT SSP
Sbjct: 301 EKVFRFARARNIPIVMLTSGGYMKSSAKVIADSIENLSKQRLIDTESSP 348

[Close]

BLAST of Moc11g04000.1 vs. TAIR 10
Match: AT5G26040.2 (histone deacetylase 2 )

HSP 1 Score: 508.8 bits (1309), Expect = 3.4e-144
Identity = 251/344 (72.97%), Postives = 288/344 (83.72%), Query Frame = 0


Query: 2   SSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKKW 61
           S  SS      PE  RR+RIL++KLYFDVP SKV +IYSSSYDISF+GIEKLHPFDS KW
Sbjct: 41  SEISSFSMATHPEALRRERILNSKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKW 100

Query: 62  RRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVFP 121
            RVC+FLV+ G L +  IVEPLEA K DLLVVH ++YL+SLK+S  VA+I EV PVA FP
Sbjct: 101 GRVCKFLVSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITEVAPVAFFP 160

Query: 122 HCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLCI 181
           + +V+ KV  PFR QVGGTILAAKLA ERGWAIN+GGGFHHC+AE GGGFC +ADISLCI
Sbjct: 161 NFLVQQKVLYPFRKQVGGTILAAKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCI 220

Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQKV 241
           H+AF++L ISRVMIIDLDAHQGNGHE D   D RVYILDM+NP IYPFDY ARR IDQKV
Sbjct: 221 HFAFLRLRISRVMIIDLDAHQGNGHETDLGDDNRVYILDMYNPEIYPFDYRARRFIDQKV 280

Query: 242 EVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRDE 301
           EV SGT T EYL+KL+EALE+A+ ++ P+L++YNAGTDILDGDPLGLLKIS  GI  RDE
Sbjct: 281 EVMSGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDE 340

Query: 302 KVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDT 346
           KVF+FAR +NIP+VMLTSGGYMKSSA+VIADSIENLS+Q LI T
Sbjct: 341 KVFRFAREKNIPLVMLTSGGYMKSSARVIADSIENLSRQGLIQT 384

[Close]

BLAST of Moc11g04000.1 vs. TAIR 10
Match: AT5G26040.1 (histone deacetylase 2 )

HSP 1 Score: 447.6 bits (1150), Expect = 9.3e-126
Identity = 229/344 (66.57%), Postives = 262/344 (76.16%), Query Frame = 0


Query: 2   SSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKKW 61
           S  SS      PE  RR+RIL++KLYFDVP SKV +IYSSSYDISF+GIEKLHPFDS KW
Sbjct: 41  SEISSFSMATHPEALRRERILNSKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKW 100

Query: 62  RRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVFP 121
            RVC+FLV+ G L +  IVEPLEA K DLLVVH ++YL+SLK+S  VA+I EV PVA FP
Sbjct: 101 GRVCKFLVSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITEVAPVAFFP 160

Query: 122 HCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLCI 181
           + +V+ KV  PFR QVGGTILAAKLA ERGWAIN+GGGFHHC+AE G             
Sbjct: 161 NFLVQQKVLYPFRKQVGGTILAAKLATERGWAINIGGGFHHCTAERG------------- 220

Query: 182 HYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQKV 241
                          DLDAHQGNGHE D   D RVYILDM+NP IYPFDY ARR IDQKV
Sbjct: 221 ---------------DLDAHQGNGHETDLGDDNRVYILDMYNPEIYPFDYRARRFIDQKV 280

Query: 242 EVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRDE 301
           EV SGT T EYL+KL+EALE+A+ ++ P+L++YNAGTDILDGDPLGLLKIS  GI  RDE
Sbjct: 281 EVMSGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDE 340

Query: 302 KVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDT 346
           KVF+FAR +NIP+VMLTSGGYMKSSA+VIADSIENLS+Q LI T
Sbjct: 341 KVFRFAREKNIPLVMLTSGGYMKSSARVIADSIENLSRQGLIQT 356

[Close]

BLAST of Moc11g04000.1 vs. TAIR 10
Match: AT4G38130.1 (histone deacetylase 1 )

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-17
Identity = 81/311 (26.05%), Postives = 126/311 (40.51%), Query Frame = 0


Query: 54  HPFDSKKWRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKN---SLNVAK 113
           HP    + R     L   G+L+  Q+++P  A+  DL   H   Y+  L++        +
Sbjct: 36  HPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQ 95

Query: 114 IIEVPPVAVFPHCIVKNKVQRPFRNQVGGTILAAKLAKERGW---AINVGGGFHHCSAEL 173
           I ++    V   C V + +    +   GG++    +    G    AIN  GG HH     
Sbjct: 96  IRQLKRFNVGEDCPVFDGLYSFCQTYAGGSV-GGSVKLNHGLCDIAINWAGGLHHAKKCE 155

Query: 174 GGGFCVYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDM-----F 233
             GFC   DI L I     Q    RV+ +D+D H G+G E  F    RV  +       +
Sbjct: 156 ASGFCYVNDIVLAILELLKQ--HERVLYVDIDIHHGDGVEEAFYATDRVMTVSFHKFGDY 215

Query: 234 NPG---IYPFDYEARRCIDQKVEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTD 293
            PG   I    Y + +     V +D G     Y    +  +      + P  +V   G D
Sbjct: 216 FPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGAD 275

Query: 294 ILDGDPLGLLKISAGGIAMRDEKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSK 351
            L GD LG   +S  G A    +  KF R+ N+P+++L  GGY          +I N+++
Sbjct: 276 SLSGDRLGCFNLSIKGHA----ECVKFMRSFNVPLLLLGGGGY----------TIRNVAR 329

[Close]

BLAST of Moc11g04000.1 vs. TAIR 10
Match: AT4G38130.2 (histone deacetylase 1 )

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-17
Identity = 81/311 (26.05%), Postives = 126/311 (40.51%), Query Frame = 0


Query: 54  HPFDSKKWRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKN---SLNVAK 113
           HP    + R     L   G+L+  Q+++P  A+  DL   H   Y+  L++        +
Sbjct: 36  HPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQ 95

Query: 114 IIEVPPVAVFPHCIVKNKVQRPFRNQVGGTILAAKLAKERGW---AINVGGGFHHCSAEL 173
           I ++    V   C V + +    +   GG++    +    G    AIN  GG HH     
Sbjct: 96  IRQLKRFNVGEDCPVFDGLYSFCQTYAGGSV-GGSVKLNHGLCDIAINWAGGLHHAKKCE 155

Query: 174 GGGFCVYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDM-----F 233
             GFC   DI L I     Q    RV+ +D+D H G+G E  F    RV  +       +
Sbjct: 156 ASGFCYVNDIVLAILELLKQ--HERVLYVDIDIHHGDGVEEAFYATDRVMTVSFHKFGDY 215

Query: 234 NPG---IYPFDYEARRCIDQKVEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTD 293
            PG   I    Y + +     V +D G     Y    +  +      + P  +V   G D
Sbjct: 216 FPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGAD 275

Query: 294 ILDGDPLGLLKISAGGIAMRDEKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSK 351
            L GD LG   +S  G A    +  KF R+ N+P+++L  GGY          +I N+++
Sbjct: 276 SLSGDRLGCFNLSIKGHA----ECVKFMRSFNVPLLLLGGGGY----------TIRNVAR 329

[Close]

BLAST of Moc11g04000.1 vs. TAIR 10
Match: AT5G63110.1 (histone deacetylase 6 )

HSP 1 Score: 83.2 bits (204), Expect = 4.6e-16
Identity = 78/284 (27.46%), Postives = 116/284 (40.85%), Query Frame = 0


Query: 54  HPFDSKKWRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSL-----KNSLNV 113
           HP    + R     ++   + R+ +I  P  A  +D+   H   Y+D L     ++  + 
Sbjct: 38  HPMKPHRIRMAHSLIIHYHLHRRLEISRPSLADASDIGRFHSPEYVDFLASVSPESMGDP 97

Query: 114 AKIIEVPPVAVFPHCIVKNKVQRPFRNQVGGTILAA-KL-AKERGWAINVGGGFHHCSAE 173
           +    +    V   C V + +    R   GG+I AA KL  ++   AIN GGG HH    
Sbjct: 98  SAARNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKS 157

Query: 174 LGGGFCVYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDM----- 233
              GFC   DI L I          RV+ ID+D H G+G E  F    RV  +       
Sbjct: 158 EASGFCYVNDIVLGILELLKM--FKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD 217

Query: 234 FNPG---IYPFDYEARRCIDQKVEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGT 293
           F PG   I     E  +     V ++ G     +       ++     Y P+ +V   G 
Sbjct: 218 FFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGA 277

Query: 294 DILDGDPLGLLKISAGGIAMRDEKVFKFARTRNIPIVMLTSGGY 323
           D L GD LG   +S  G A       +F R+ N+P+++L  GGY
Sbjct: 278 DSLSGDRLGCFNLSVKGHA----DCLRFLRSYNVPLMVLGGGGY 315

The following BLAST results are available for this feature:

BLAST of Moc11g04000.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140219.1	5.0e-198	100.00	histone deacetylase 2 isoform X2 [Momordica charantia]	[more]
XP_022140202.1	4.8e-193	92.82	histone deacetylase 2 isoform X1 [Momordica charantia] >XP_022140210.1 histone d...	[more]
XP_008452709.1	1.5e-178	90.83	PREDICTED: histone deacetylase 2 [Cucumis melo] >KAA0064492.1 histone deacetylas...	[more]
XP_038899967.1	5.7e-178	90.00	histone deacetylase 2 isoform X2 [Benincasa hispida]	[more]
XP_004141312.1	6.4e-177	89.68	histone deacetylase 2 isoform X2 [Cucumis sativus] >KGN55325.1 hypothetical prot...	[more]

BLAST of Moc11g04000.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q944K3	4.8e-143	72.97	Histone deacetylase 2 OS=Arabidopsis thaliana OX=3702 GN=HDA2 PE=2 SV=2	[more]
Q9GKU5	2.7e-98	55.59	Histone deacetylase 11 OS=Macaca fascicularis OX=9541 GN=HDAC11 PE=2 SV=2	[more]
Q96DB2	1.0e-97	55.28	Histone deacetylase 11 OS=Homo sapiens OX=9606 GN=HDAC11 PE=1 SV=1	[more]
Q91WA3	5.2e-97	54.97	Histone deacetylase 11 OS=Mus musculus OX=10090 GN=Hdac11 PE=1 SV=1	[more]
P28606	2.1e-26	30.03	Uncharacterized protein SYNPCC7002_A1628 OS=Synechococcus sp. (strain ATCC 27264...	[more]

BLAST of Moc11g04000.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CF45	2.4e-198	100.00	Histone deacetylase OS=Momordica charantia OX=3673 GN=LOC111010925 PE=4 SV=1	[more]
A0A6J1CG62	2.3e-193	92.82	Histone deacetylase OS=Momordica charantia OX=3673 GN=LOC111010925 PE=4 SV=1	[more]
A0A5D3D9B1	7.3e-179	90.83	Histone deacetylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G...	[more]
A0A1S3BUF6	7.3e-179	90.83	Histone deacetylase OS=Cucumis melo OX=3656 GN=LOC103493650 PE=4 SV=1	[more]
A0A0A0L030	3.1e-177	89.68	Histone deacetylase OS=Cucumis sativus OX=3659 GN=Csa_4G645990 PE=4 SV=1	[more]

BLAST of Moc11g04000.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26040.2	3.4e-144	72.97	histone deacetylase 2	[more]
AT5G26040.1	9.3e-126	66.57	histone deacetylase 2	[more]
AT4G38130.1	1.1e-17	26.05	histone deacetylase 1	[more]
AT4G38130.2	1.1e-17	26.05	histone deacetylase 1	[more]
AT5G63110.1	4.6e-16	27.46	histone deacetylase 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000286	Histone deacetylase family	PRINTS	PR01270	HDASUPER	coord: 269..279 score: 43.01 coord: 158..181 score: 36.06 coord: 192..207 score: 52.04
IPR023801	Histone deacetylase domain	PFAM	PF00850	Hist_deacetyl	coord: 54..331 e-value: 5.9E-51 score: 173.7
IPR037138	Histone deacetylase domain superfamily	GENE3D	3.40.800.20	Histone deacetylase domain	coord: 35..347 e-value: 4.3E-61 score: 208.9
None	No IPR available	PANTHER	PTHR43497	HISTONE DEACETYLASE 11	coord: 12..346
None	No IPR available	PANTHER	PTHR43497:SF2	HISTONE DEACETYLASE 11	coord: 12..346
IPR044150	Histone deacetylase 11	CDD	cd09993	HDAC_classIV	coord: 54..337 e-value: 1.03191E-130 score: 372.601
IPR023696	Ureohydrolase domain superfamily	SUPERFAMILY	52768	Arginase/deacetylase	coord: 32..331

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc11g04000	Moc11g04000	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc11g04000.1.exon13	Moc11g04000.1.exon13	exon
Moc11g04000.1.exon12	Moc11g04000.1.exon12	exon
Moc11g04000.1.exon11	Moc11g04000.1.exon11	exon
Moc11g04000.1.exon10	Moc11g04000.1.exon10	exon
Moc11g04000.1.exon9	Moc11g04000.1.exon9	exon
Moc11g04000.1.exon8	Moc11g04000.1.exon8	exon
Moc11g04000.1.exon7	Moc11g04000.1.exon7	exon
Moc11g04000.1.exon6	Moc11g04000.1.exon6	exon
Moc11g04000.1.exon5	Moc11g04000.1.exon5	exon
Moc11g04000.1.exon4	Moc11g04000.1.exon4	exon
Moc11g04000.1.exon3	Moc11g04000.1.exon3	exon
Moc11g04000.1.exon2	Moc11g04000.1.exon2	exon
Moc11g04000.1.exon1	Moc11g04000.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc11g04000.1	cds.Moc11g04000.1_13	CDS
cds.Moc11g04000.1	cds.Moc11g04000.1_12	CDS
cds.Moc11g04000.1	cds.Moc11g04000.1_11	CDS
cds.Moc11g04000.1	cds.Moc11g04000.1_10	CDS
cds.Moc11g04000.1	cds.Moc11g04000.1_9	CDS
cds.Moc11g04000.1	cds.Moc11g04000.1_8	CDS
cds.Moc11g04000.1	cds.Moc11g04000.1_7	CDS
cds.Moc11g04000.1	cds.Moc11g04000.1_6	CDS
cds.Moc11g04000.1	cds.Moc11g04000.1_5	CDS
cds.Moc11g04000.1	cds.Moc11g04000.1_4	CDS
cds.Moc11g04000.1	cds.Moc11g04000.1_3	CDS
cds.Moc11g04000.1	cds.Moc11g04000.1_2	CDS
cds.Moc11g04000.1	cds.Moc11g04000.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc11g04000.1	Moc11g04000.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016575	histone deacetylation
biological_process	GO:0006325	chromatin organization
biological_process	GO:0070932	histone H3 deacetylation
cellular_component	GO:0000118	histone deacetylase complex
molecular_function	GO:0004407	histone deacetylase activity
molecular_function	GO:0032041	NAD-dependent histone deacetylase activity (H3-K14 specific)