Moc09g33400.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g33400.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	GATA type zinc finger transcription factor family protein
Location	chr9: 25377040 .. 25380970 (+)
Sequence length	687
RNA-Seq Expression	Moc09g33400.1
Synteny	Moc09g33400.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGCGACCCCAATTTGTGAAGATGATCACAGAATTCAAGATGTGGAGACTTCAATGGGCGCCATATATAAGTTCCCTGACTTTCTTCTGGTTCCAGAGCGCATTTCCATTTCCAGAGGGGTGGTGTTCTGAACTGTGTTTTCATGCTTCAGCAGTTAGAGAAAAATGAAAAATTGATACTGAAATTGAAATTTTCGAAGCATCAAATTGATTGAACCAAGCTCAATTCATCAAAATTTGAAGAAATAAAATAAAAAAACCTAGGTTAAATATACGGTACCTAAACTTGTAACTTTTAATTTTGTCCTTAAATCTTTTTTAAATTCTTAACTTTACCTTTTAGTGTAAATATATTATAAAAGAATTTAACGACCATCAATTTTTCATTAGTAATCATATGCTGAGATGAGTTCAATTTTTGCCCTAAATTTCTCATTTTATCAAACTATACCTTAGACTTGGATTAAAAAAATAATAACGATGGAATTTGTTGCTTTTCCATTTTTTTTAATTGTTACATCACAAACTAAAATGAGAAAGGTGCAAATGTCTAAGTAATCGATTAATTTTTTTAGTACAATCTATTGGATCTGGATTTCAAATTCAACCATGATCAGAAATAGGTGTCAATTACCATTCAATTATTTTTACTTTGACAATTAATTAAGTTATTTAGAGTGAAAAGGTAGTTTGTTTTTCAAAGGGACATCATAGTACCATGGTTTAAAAAATATTTTTTTTACTAAAATTATGAATTGATTTTCATACGAAGCGAAAGTTCATATTTAAGTCCATCTTATAATAGAAACTACATGCCAACCTATAATTCACTAATCTAGGTATCTTGATTTTTTTTTTTCGAAATCGAAGGTTGAATCTCTCCTTCCGCATTTCTGGTAGTAAAACAATTTTTAGGAACAAGCTATTTCAACTGCATAATTATAATTATCGTTAAATAATTATGAAAAAATTGAGAGTTTAGTTGCAAAAAAGCATAATTTAGGCATTATAATGAACAAGACACACTGGTCCACCTCCACGCCAAGACAGGAGAAGACTGAAGGCTGAATCAGAAAACAAAGACAAGAGACAAAACGACACGTCGTTACTCTGCGGGATGGCGATGGTGGAGCTCCAGTACTGAAAAAGGTGGAGAAGAAAGAAAGTCGCACCGGGACCGGGACCGCGACGGAGTAAAGTTGAAGCAAGCAATGTGTGTCTTTCCGGCAAAGATATTTTTCTCGGATCCCTTTTTCACTTTATCTTTTCTTTTTCTTTCCCTTTTTTCTATAAAGAAAATCGACGCTGTGATGTGAATAATAATAGATCATAAATTATTTGTTTCTGCCTTTCGCTATCTTTCCTTTCATTATCTTCTTCTTCTCTGCTCCACTTGCCAGAACGAAGAACAATCGCTGCTTTTGGTTATTGCCTCGATTTTTAGGTACCCATCTTCAGTTTCGATTGCATGTGAACTCTGACCAAGATCTTGTTTCTTCAGCATTTTTGGTGTTTTGAAGTGTTTTGAGCTCACCGATTTGCTTTTCCCTGAGTTTCAGATCATTGACTGCAGCTTCTTTTTTCTTTTATTGCTTCTGAATTTGATTCTGGGTTTTTGTGTTTTTCTTGTGTTTGATGAAATGACAGTAGGAAAAGGGTGTTTGTTTGACCAAAGTAGCTTGGTGGGTTTGAATTGGAGGTGATTTTGGGTTGGTTGAGAATAGTCAGATCTACTCTTAAGGCTTAGCTATGTCGTTTATTGGCACCCAACAGAAGTGCAAAGCTTGTGAGAAGACTGTGTACCCTGTAGATCAGTTATCTGCTGATGGAGTTGCTTTCCACAAGTCATGTTTTAAATGTAGCCATTGCAAAGGGACTCTGAAGGTACATCCGTAGCTTCTCTTTTCGGTGATCCTTGAGAGTGGTCTTTGATTTTCTTGCCTCACTTGCACTTGATAGGAATAGAGAAAAGTGATGGATCTATATTCTAGGTAGTGTCTGAAAGAATGTTTCAAAACAATAATAATTAAGTCAATGTTTGGGTAACTGTTTGTTTGTTTTTTTTGTTTTTTTGTTTTTTTAAGTTTATTCCTATAGATGGTATGTTTTTCTGAACAACTAAAGTTGTTCTTTCTCCTCGTGAAATCTTAACTTTACGAGCCTTGAAAACAAAAACAGAAAACAACCTCCCAAACAAGTCCTTAGTTTCATTTATTATATCTCCCCTCTCGTAGCATATTTTAGAGAACTGTTTTCTGTCTCTCTGTCTCTCTTTTCTTTTGAGGATTTTCATGAACAGTTAGAGTAAGTACTGTGTGTGTGTCAATGTGTGGTGTTTAAAAGGTAAACAAATAAAAAAATAAACTCCAGTTTATATATACATGATTACCCAGCATTGTTTTGGGTCAGTGTCAAAACTACTACTCCAAAATGACTTATCAAATGTCAAATGTCTACAGCTCAGTAATTATTCTTCAATGGAAGGTGTTCTGTACTGCAAGCCTCACTTTGAGCAGCTCTTCAAGGAAACTGGCAACTTCAGCAAGAACTTTCTATCTCGTATGTACCAAACTTTACCGAATAAAGAAGACACTCTACATTTGATCTTGTAGCTATTGCTTTTTAGTGACCTTTATTTTTAATTTTATCTCACAGCTGCAAAATCGACAGATAAACCAACTCCAGAGCTGGTAAGTTTAACACCAATTCTACTGCAACTAGTTGTGATTAAATTTATAATCAGTTGCTCATTCCATTGCCTCTTGTTGGTTCCAGACTAGGTCACCAAGTAAAGCTGCTAGCATGTTCTCTGGGACTCAGGAAAAATGTGCTACATGTGGAAAAACTGCATATCCACTGGAGAAGGTTAGTTTGGAAGATGTTAATGTTAGAAATATATTCAAGCTTAAACATAAGCTTGGTCTCCCAACTTTTAGGATTGTGTCTAAAGGTCCTTAAACTTCAAAAAAAAAAAAAAAAGAAAAGAAAATCTAATAGATCTATAAACTTTTAATGTTGTATTTAATAAGTCTCTAAACTTTAAAATTGTCAATTGTCTGACAGGTCTCTAAATTTTTAATTTTATATATAATAGGTCTCTAATTTTATGTTTAATAAGTTTCTTAACTTTCAATTTTGGGTCTAATAGGTCCTTAACTCATGAGACATTTTTTAAGTTCAAGGAACTACTGAATACAAAATTGAAAGTTTGTGGATTTGCCAGATATTTTTTAAAGTTTAGGGGCCTATTAATGCAACATTGAAAATTTAGGGACCTATTAGACACGTTTTAAAATTCAAGTACTTATTGGACACAACCCTCTAAGTTCAAGGGTAACTTATAATTTAACCTATATTTGAACATTTAAAACCTCCTTTGCATCAACCATTAGCTGCCTTCTTTTTGTTAGGGTTTTGAAGTTATTTTGTATATTATCGTTTTCAATCTTTACATATGAATCTCTAAAAGAAAAGGTACATTCCTCAAAGCTACTCCATTGAAATGAGTTGGTATTCTGAACAGTTTGAATGTAGGCTTTGAGGAACTGTGGAAGTTACATATCCTCAATAGCTTAATCTAGTCTTTACTGCTCAGGTAGAAATCATCTCAATTTTCAAGCAGGTCTGCTGGTGTTGGTTTTATAATGCATCTGTGCAGATATTTTATCGGTAATGGATCTCGGGAATTTCTTGTATGCAGGTGACAGTCGAGAGTCAGGCCTATCACAAGTCGTGTTTTAAATGCTCGCACGGCGGCTGTTCTTTATCTCCATCAAACTATGCTGCACTTGATGGAATTTTGTACTGCAAACACCACTTTTCGCAACTTTTCAAGGAAAAAGGAAGCTACAACCACTTGATCAAGTCTGCATCCATGAAGCGTCAAGCAGCAACCTCAGTTCCCGATGCTGAAAATGTCGAGTTATGA

mRNA sequence

ATGGTTGCGACCCCAATTTGTGAAGATGATCACAGAATTCAAGATGTGGAGACTTCAATGGGCGCCATATATAAGTTCCCTGACTTTCTTCTGGTTCCAGAGCGCATTTCCATTTCCAGAGGGAAGTGCAAAGCTTGTGAGAAGACTGTGTACCCTGTAGATCAGTTATCTGCTGATGGAGTTGCTTTCCACAAGTCATGTTTTAAATGTAGCCATTGCAAAGGGACTCTGAAGCTCAGTAATTATTCTTCAATGGAAGGTGTTCTGTACTGCAAGCCTCACTTTGAGCAGCTCTTCAAGGAAACTGGCAACTTCAGCAAGAACTTTCTATCTCCTGCAAAATCGACAGATAAACCAACTCCAGAGCTGACTAGGTCACCAAGTAAAGCTGCTAGCATGTTCTCTGGGACTCAGGAAAAATGTGCTACATGTGGAAAAACTGCATATCCACTGGAGAAGGTGACAGTCGAGAGTCAGGCCTATCACAAGTCGTGTTTTAAATGCTCGCACGGCGGCTGTTCTTTATCTCCATCAAACTATGCTGCACTTGATGGAATTTTGTACTGCAAACACCACTTTTCGCAACTTTTCAAGGAAAAAGGAAGCTACAACCACTTGATCAAGTCTGCATCCATGAAGCGTCAAGCAGCAACCTCAGTTCCCGATGCTGAAAATGTCGAGTTATGA

Coding sequence (CDS)

ATGGTTGCGACCCCAATTTGTGAAGATGATCACAGAATTCAAGATGTGGAGACTTCAATGGGCGCCATATATAAGTTCCCTGACTTTCTTCTGGTTCCAGAGCGCATTTCCATTTCCAGAGGGAAGTGCAAAGCTTGTGAGAAGACTGTGTACCCTGTAGATCAGTTATCTGCTGATGGAGTTGCTTTCCACAAGTCATGTTTTAAATGTAGCCATTGCAAAGGGACTCTGAAGCTCAGTAATTATTCTTCAATGGAAGGTGTTCTGTACTGCAAGCCTCACTTTGAGCAGCTCTTCAAGGAAACTGGCAACTTCAGCAAGAACTTTCTATCTCCTGCAAAATCGACAGATAAACCAACTCCAGAGCTGACTAGGTCACCAAGTAAAGCTGCTAGCATGTTCTCTGGGACTCAGGAAAAATGTGCTACATGTGGAAAAACTGCATATCCACTGGAGAAGGTGACAGTCGAGAGTCAGGCCTATCACAAGTCGTGTTTTAAATGCTCGCACGGCGGCTGTTCTTTATCTCCATCAAACTATGCTGCACTTGATGGAATTTTGTACTGCAAACACCACTTTTCGCAACTTTTCAAGGAAAAAGGAAGCTACAACCACTTGATCAAGTCTGCATCCATGAAGCGTCAAGCAGCAACCTCAGTTCCCGATGCTGAAAATGTCGAGTTATGA

Protein sequence

MVATPICEDDHRIQDVETSMGAIYKFPDFLLVPERISISRGKCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKETGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSVPDAENVEL

Homology

[Close]

BLAST of Moc09g33400.1 vs. NCBI nr
Match: XP_022156896.1 (LIM domain-containing protein WLIM2b-like [Momordica charantia] >XP_022156897.1 LIM domain-containing protein WLIM2b-like [Momordica charantia] >XP_022156898.1 LIM domain-containing protein WLIM2b-like [Momordica charantia])

HSP 1 Score: 391.0 bits (1003), Expect = 7.2e-105
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE
Sbjct: 9   KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY
Sbjct: 69  TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSVP 221
           HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSVP
Sbjct: 129 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSVP 188

Query: 222 DAENVEL 229
           DAENVEL
Sbjct: 189 DAENVEL 195

[Close]

BLAST of Moc09g33400.1 vs. NCBI nr
Match: XP_023549082.1 (LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo] >XP_023549090.1 LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo] >XP_023549098.1 LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo] >XP_023549105.1 LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo] >XP_023549115.1 LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374.4 bits (960), Expect = 7.0e-100
Identity = 179/187 (95.72%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKACEKTVYPVDQLSADGVAFHK CFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE
Sbjct: 9   KCKACEKTVYPVDQLSADGVAFHKLCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           TGNFSKNFLSPAKS DKPTPELTRSPSKAA MFSGTQEKCATCGKTAYPLEKVTVESQAY
Sbjct: 69  TGNFSKNFLSPAKSADKPTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSVP 221
           HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAA S P
Sbjct: 129 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAAISDP 188

Query: 222 DAENVEL 229
           D   VEL
Sbjct: 189 DTSKVEL 195

[Close]

BLAST of Moc09g33400.1 vs. NCBI nr
Match: XP_004150238.1 (LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_031741833.1 LIM domain-containing protein WLIM2b [Cucumis sativus] >KGN50627.1 hypothetical protein Csa_021390 [Cucumis sativus])

HSP 1 Score: 374.0 bits (959), Expect = 9.1e-100
Identity = 177/186 (95.16%), Postives = 182/186 (97.85%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKAC+KTVYPVDQLSADGV+FHKSCFKCSHCKGTLKLSNYSSM+GVLYCKPHFEQLFKE
Sbjct: 9   KCKACDKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           TGNFSKNFLSPAKS++KPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY
Sbjct: 69  TGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSVP 221
           HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATS P
Sbjct: 129 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSDP 188

Query: 222 DAENVE 228
           D   VE
Sbjct: 189 DPSKVE 194

[Close]

BLAST of Moc09g33400.1 vs. NCBI nr
Match: XP_022996549.1 (LIM domain-containing protein WLIM2a-like [Cucurbita maxima] >XP_022996558.1 LIM domain-containing protein WLIM2a-like [Cucurbita maxima] >XP_022996568.1 LIM domain-containing protein WLIM2a-like [Cucurbita maxima] >XP_022996576.1 LIM domain-containing protein WLIM2a-like [Cucurbita maxima] >XP_022996583.1 LIM domain-containing protein WLIM2a-like [Cucurbita maxima])

HSP 1 Score: 374.0 bits (959), Expect = 9.1e-100
Identity = 179/187 (95.72%), Postives = 180/187 (96.26%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKACEKTVYPVDQLSADGVAFHK CFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE
Sbjct: 9   KCKACEKTVYPVDQLSADGVAFHKLCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           TGNFSKNFLSPAKS DKPTPEL RSPSKAA MFSGTQEKCATCGKTAYPLEKVTVESQAY
Sbjct: 69  TGNFSKNFLSPAKSADKPTPELNRSPSKAARMFSGTQEKCATCGKTAYPLEKVTVESQAY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSVP 221
           HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATS P
Sbjct: 129 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSDP 188

Query: 222 DAENVEL 229
           +A  VEL
Sbjct: 189 NASKVEL 195

[Close]

BLAST of Moc09g33400.1 vs. NCBI nr
Match: XP_038891809.1 (LIM domain-containing protein WLIM2b-like [Benincasa hispida] >XP_038891810.1 LIM domain-containing protein WLIM2b-like [Benincasa hispida] >XP_038891811.1 LIM domain-containing protein WLIM2b-like [Benincasa hispida])

HSP 1 Score: 373.6 bits (958), Expect = 1.2e-99
Identity = 179/186 (96.24%), Postives = 181/186 (97.31%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE
Sbjct: 9   KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           TGNFSKNFLSPAKS++KPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY
Sbjct: 69  TGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSVP 221
           HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATS  
Sbjct: 129 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSDL 188

Query: 222 DAENVE 228
           D   VE
Sbjct: 189 DPSKVE 194

[Close]

BLAST of Moc09g33400.1 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 7.8e-86
Identity = 146/179 (81.56%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKACEKTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSMEGVLYCKPHFEQLFKE
Sbjct: 9   KCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           +G+F+KNF SPAKS DK TPELTR+PS+ A  FSGTQEKCATC KT YP+EKVTVESQ Y
Sbjct: 69  SGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSV 221
           HKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS+KR AA +V
Sbjct: 129 HKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRSAAAAV 187

[Close]

BLAST of Moc09g33400.1 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 8.6e-85
Identity = 145/186 (77.96%), Postives = 165/186 (88.71%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KC+ACEKTVYPV+ LSADG+++HK+CFKCSHCK  L+LSNYSSMEGV+YC+PHFEQLFKE
Sbjct: 9   KCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKS-TDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQA 161
           +G+FSKNF SPAK  TDKPTPEL R+PS+ A MFSGTQ+KCATC KT YP+EKVTVESQ 
Sbjct: 69  SGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQC 128

Query: 162 YHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSV 221
           YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS+KR  A + 
Sbjct: 129 YHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRATAAAT 188

Query: 222 PDAENV 227
             A  V
Sbjct: 189 AAAAAV 194

[Close]

BLAST of Moc09g33400.1 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 6.6e-69
Identity = 117/178 (65.73%), Postives = 151/178 (84.83%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKAC+KTVY +D L+ +G  +HKSCF+C+HCKGTL +SNYSSM+GVLYCKPHFEQLFKE
Sbjct: 9   KCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           +GN+SKNF   A  T+KP   LTR+PSK +S FSGTQ+KCATC KT YPLEKVT+E ++Y
Sbjct: 69  SGNYSKNF--QAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVTMEGESY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATS 220
           HK+CF+C+H GC L+ S+YA+L+G+LYCK HF+QLF EKGSYNH+ ++A+  R++A+S
Sbjct: 129 HKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRRSASS 184

[Close]

BLAST of Moc09g33400.1 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.7e-67
Identity = 117/186 (62.90%), Postives = 145/186 (77.96%), Query Frame = 0


Query: 39  SRGKCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQL 98
           ++ KC AC+KTV+ +D L+ADGV +HK+CFKCSHCKG L + +YSSM+GVLYCK HFEQL
Sbjct: 6   TQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQL 65

Query: 99  FKETGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVES 158
           FKETG+FSK F    +STDK   EL R+PSK  S FSGTQ+KCA C KT YPLEK+T+E 
Sbjct: 66  FKETGSFSKKFAPGCRSTDK---ELARAPSKICSAFSGTQDKCAACQKTVYPLEKLTLEG 125

Query: 159 QAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAAT 218
           ++YHKSCFKCSHGGC L+ S+YAAL+G+LYCK HF QLF EKGSYNH+ K +  +     
Sbjct: 126 ESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSESQEVLPE 185

Query: 219 SVPDAE 225
            VP+ +
Sbjct: 186 VVPEEQ 188

[Close]

BLAST of Moc09g33400.1 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.1e-66
Identity = 114/186 (61.29%), Postives = 152/186 (81.72%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KC  C+KTVY VD LS +G+ +HKSCF+C+HCKGTL++SNYSSM+GVLYCK HFEQLFKE
Sbjct: 9   KCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKTHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           +GNFSKNF  P K T+K  PELTR+PSK +S+F GTQ+KCA C KT YPLEK+ +E + +
Sbjct: 69  SGNFSKNF-QPGK-TEK--PELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQMEGECF 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSVP 221
           HK+CF+C+HGGC+L+ S+YA+LD +LYC+HHF+QLF EKG+Y H++++A+ +R A+ +  
Sbjct: 129 HKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTASGNTL 188

Query: 222 DAENVE 228
             E  E
Sbjct: 189 PPEPTE 190

[Close]

BLAST of Moc09g33400.1 vs. ExPASy TrEMBL
Match: A0A6J1DT64 (LIM domain-containing protein WLIM2b-like OS=Momordica charantia OX=3673 GN=LOC111023731 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.5e-105
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE
Sbjct: 9   KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY
Sbjct: 69  TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSVP 221
           HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSVP
Sbjct: 129 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSVP 188

Query: 222 DAENVEL 229
           DAENVEL
Sbjct: 189 DAENVEL 195

[Close]

BLAST of Moc09g33400.1 vs. ExPASy TrEMBL
Match: A0A6J1KBB9 (LIM domain-containing protein WLIM2a-like OS=Cucurbita maxima OX=3661 GN=LOC111491761 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.4e-100
Identity = 179/187 (95.72%), Postives = 180/187 (96.26%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKACEKTVYPVDQLSADGVAFHK CFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE
Sbjct: 9   KCKACEKTVYPVDQLSADGVAFHKLCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           TGNFSKNFLSPAKS DKPTPEL RSPSKAA MFSGTQEKCATCGKTAYPLEKVTVESQAY
Sbjct: 69  TGNFSKNFLSPAKSADKPTPELNRSPSKAARMFSGTQEKCATCGKTAYPLEKVTVESQAY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSVP 221
           HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATS P
Sbjct: 129 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSDP 188

Query: 222 DAENVEL 229
           +A  VEL
Sbjct: 189 NASKVEL 195

[Close]

BLAST of Moc09g33400.1 vs. ExPASy TrEMBL
Match: A0A0A0KQF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G198170 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.4e-100
Identity = 177/186 (95.16%), Postives = 182/186 (97.85%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKAC+KTVYPVDQLSADGV+FHKSCFKCSHCKGTLKLSNYSSM+GVLYCKPHFEQLFKE
Sbjct: 9   KCKACDKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           TGNFSKNFLSPAKS++KPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY
Sbjct: 69  TGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSVP 221
           HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATS P
Sbjct: 129 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSDP 188

Query: 222 DAENVE 228
           D   VE
Sbjct: 189 DPSKVE 194

[Close]

BLAST of Moc09g33400.1 vs. ExPASy TrEMBL
Match: A0A6J1GYT7 (LIM domain-containing protein WLIM2b OS=Cucurbita moschata OX=3662 GN=LOC111458736 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.9e-98
Identity = 176/187 (94.12%), Postives = 178/187 (95.19%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKACEKTVYPVDQLSADGVAFHKSCFKCSHC GTLKLSNYSSMEGVLYCKPHFEQLFKE
Sbjct: 9   KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCSGTLKLSNYSSMEGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
            GNFSKNFLS AKS++KPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY
Sbjct: 69  AGNFSKNFLSTAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSVP 221
           HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSA MKRQ ATS P
Sbjct: 129 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSALMKRQVATSDP 188

Query: 222 DAENVEL 229
           D   VEL
Sbjct: 189 DTSKVEL 195

[Close]

BLAST of Moc09g33400.1 vs. ExPASy TrEMBL
Match: A0A1S3CIM8 (LIM domain-containing protein WLIM2b-like OS=Cucumis melo OX=3656 GN=LOC103501413 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.4e-98
Identity = 174/186 (93.55%), Postives = 181/186 (97.31%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKAC+KTVYPVDQLSADGV+FHKSCFKCSHCKGTLKLSNYSSM+GVLYCKPHFEQLFKE
Sbjct: 9   KCKACDKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           TGNFSKNFLSPAKS++KPTPELTRSPS+AASMFSGTQEKCATCGKTAYPLEKVTVESQAY
Sbjct: 69  TGNFSKNFLSPAKSSEKPTPELTRSPSRAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSVP 221
           HKSCFKCSHGGCSLSPSNYAAL+GILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATS  
Sbjct: 129 HKSCFKCSHGGCSLSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSDS 188

Query: 222 DAENVE 228
           D   VE
Sbjct: 189 DPSKVE 194

[Close]

BLAST of Moc09g33400.1 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 318.2 bits (814), Expect = 5.5e-87
Identity = 146/179 (81.56%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKACEKTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSMEGVLYCKPHFEQLFKE
Sbjct: 9   KCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           +G+F+KNF SPAKS DK TPELTR+PS+ A  FSGTQEKCATC KT YP+EKVTVESQ Y
Sbjct: 69  SGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSV 221
           HKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS+KR AA +V
Sbjct: 129 HKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRSAAAAV 187

[Close]

BLAST of Moc09g33400.1 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 318.2 bits (814), Expect = 5.5e-87
Identity = 146/179 (81.56%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKACEKTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSMEGVLYCKPHFEQLFKE
Sbjct: 9   KCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           +G+F+KNF SPAKS DK TPELTR+PS+ A  FSGTQEKCATC KT YP+EKVTVESQ Y
Sbjct: 69  SGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSV 221
           HKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS+KR AA +V
Sbjct: 129 HKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRSAAAAV 187

[Close]

BLAST of Moc09g33400.1 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 318.2 bits (814), Expect = 5.5e-87
Identity = 146/179 (81.56%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKACEKTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSMEGVLYCKPHFEQLFKE
Sbjct: 9   KCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           +G+F+KNF SPAKS DK TPELTR+PS+ A  FSGTQEKCATC KT YP+EKVTVESQ Y
Sbjct: 69  SGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSV 221
           HKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS+KR AA +V
Sbjct: 129 HKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRSAAAAV 187

[Close]

BLAST of Moc09g33400.1 vs. TAIR 10
Match: AT3G55770.4 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 318.2 bits (814), Expect = 5.5e-87
Identity = 146/179 (81.56%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKACEKTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSMEGVLYCKPHFEQLFKE
Sbjct: 9   KCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           +G+F+KNF SPAKS DK TPELTR+PS+ A  FSGTQEKCATC KT YP+EKVTVESQ Y
Sbjct: 69  SGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSV 221
           HKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS+KR AA +V
Sbjct: 129 HKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRSAAAAV 187

[Close]

BLAST of Moc09g33400.1 vs. TAIR 10
Match: AT3G55770.5 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 318.2 bits (814), Expect = 5.5e-87
Identity = 146/179 (81.56%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 42  KCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKE 101
           KCKACEKTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSMEGVLYCKPHFEQLFKE
Sbjct: 9   KCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQLFKE 68

Query: 102 TGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAY 161
           +G+F+KNF SPAKS DK TPELTR+PS+ A  FSGTQEKCATC KT YP+EKVTVESQ Y
Sbjct: 69  SGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTY 128

Query: 162 HKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSV 221
           HKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS+KR AA +V
Sbjct: 129 HKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRSAAAAV 187

The following BLAST results are available for this feature:

BLAST of Moc09g33400.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156896.1	7.2e-105	100.00	LIM domain-containing protein WLIM2b-like [Momordica charantia] >XP_022156897.1 ...	[more]
XP_023549082.1	7.0e-100	95.72	LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo] >XP_02354...	[more]
XP_004150238.1	9.1e-100	95.16	LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_031741833.1 LIM domai...	[more]
XP_022996549.1	9.1e-100	95.72	LIM domain-containing protein WLIM2a-like [Cucurbita maxima] >XP_022996558.1 LIM...	[more]
XP_038891809.1	1.2e-99	96.24	LIM domain-containing protein WLIM2b-like [Benincasa hispida] >XP_038891810.1 LI...	[more]

BLAST of Moc09g33400.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M047	7.8e-86	81.56	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O04193	8.6e-85	77.96	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
O80839	6.6e-69	65.73	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
Q7F9R9	4.7e-67	62.90	LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q1ECF5	1.1e-66	61.29	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]

BLAST of Moc09g33400.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DT64	3.5e-105	100.00	LIM domain-containing protein WLIM2b-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1KBB9	4.4e-100	95.72	LIM domain-containing protein WLIM2a-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0KQF5	4.4e-100	95.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G198170 PE=4 SV=1	[more]
A0A6J1GYT7	1.9e-98	94.12	LIM domain-containing protein WLIM2b OS=Cucurbita moschata OX=3662 GN=LOC1114587...	[more]
A0A1S3CIM8	2.4e-98	93.55	LIM domain-containing protein WLIM2b-like OS=Cucumis melo OX=3656 GN=LOC10350141...	[more]

BLAST of Moc09g33400.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55770.1	5.5e-87	81.56	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	5.5e-87	81.56	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	5.5e-87	81.56	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.4	5.5e-87	81.56	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.5	5.5e-87	81.56	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 42..94 e-value: 6.7E-13 score: 58.9 coord: 140..192 e-value: 4.7E-12 score: 56.0
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 141..196 e-value: 1.8E-10 score: 40.9 coord: 43..98 e-value: 1.4E-11 score: 44.4
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 43..77
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 41..101 score: 13.375
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 139..199 score: 12.5434
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 38..107 e-value: 4.0E-20 score: 73.8 coord: 135..205 e-value: 1.5E-19 score: 71.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..129
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 40..222
None	No IPR available	PANTHER	PTHR24206:SF94	LIM DOMAIN-CONTAINING PROTEIN WLIM2B	coord: 40..222
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 141..201 e-value: 1.18155E-36 score: 121.423
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 42..101 e-value: 1.48524E-40 score: 131.433
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 40..68
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 133..166
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 167..206
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 69..109

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc09g33400	Moc09g33400	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc09g33400.1.exon1	Moc09g33400.1.exon1	exon
Moc09g33400.1.exon2	Moc09g33400.1.exon2	exon
Moc09g33400.1.exon3	Moc09g33400.1.exon3	exon
Moc09g33400.1.exon4	Moc09g33400.1.exon4	exon
Moc09g33400.1.exon5	Moc09g33400.1.exon5	exon
Moc09g33400.1.exon6	Moc09g33400.1.exon6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc09g33400.1	cds.Moc09g33400.1	CDS
cds.Moc09g33400.1	cds.Moc09g33400.1_2	CDS
cds.Moc09g33400.1	cds.Moc09g33400.1_3	CDS
cds.Moc09g33400.1	cds.Moc09g33400.1_4	CDS
cds.Moc09g33400.1	cds.Moc09g33400.1_5	CDS
cds.Moc09g33400.1	cds.Moc09g33400.1_6	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc09g33400.1	Moc09g33400.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding