Moc09g27850.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g27850.1
TypemRNA
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr9: 20846040 .. 20851349 (-)
Sequence length954
RNA-Seq ExpressionMoc09g27850.1
SyntenyMoc09g27850.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCTTCTGATGGTGGTGCTTTTTTAGCAATTGTAACAGAACTGAGCCACGTCAAGCATATAGATCCAGTTCATTTTCTAGACATCGATAAAATGGCTGAGGTATTCCTCTAGCATACTGTTGAAGCGCTCTATCTGTCTATCTATCTGAGGTGATAGCTCAAAGATGTTTAAATTAGAGCTCAATAGGCAAAAGAGTTCTATCCAGAATGTCCCTGTGAATCGTCTGTCTCTATCGCTCACAATGCTTTCATGGACTCCCCATAATTTCACAATGTTTTTGAAAAATAATTGTGCAGTCATTTCGGCCGAGCACATCTTTGGAGTTGGGATAAAGGTTACATACTTAGATAATCGATCAACTATCACGAGAATCGCTTCCGTCTTCCTAACTTTTAGTAGGTAGGTGATGAAGTCGAGAGACACACTCTCCCATGGTCTTGATGGAACTTGTAGGGGTTCCAGGAAGCCCGCTATCTTGGTTCACTCCACCTTGTCCTGTTGACATATGAGACACATTTCAGTATACAGCATCACGTCGTCTCTTAGATTTGGCCAATAGTAGTGTTTCTTTAGTAGGGAGTAAGTTCTCTGCCCCCCAACATGTCCTGCCCACATCGTGTTATGACACTCTCCCAGTAGGAGCTTCCTCAGGTTCCCAAAACGGGGAACGTACAAAAGGTTGCCTTTGGTGAAGAGGAGATCGTTCTAGACCAAAAACTGATGAGTCTTCCCTTCGTTAGCCAAATGAATTATCGCTTGGGTGGCTGGATCGTTCCGTAAGTTATCTTTGATGGCTTCACAAATGGATCTTGTCAACTTACTTGCTTTCAGGTGTGCTAGCATGCACAGGGTCGCATGTTTGCTCTTTCTGCTAAGGGCGTCTGCTGCTTGATTCGCACGACTTGGCTTATGTTCGAACTGAAAATCAAATTCGGCAAGGTATTCCTGCCATCTCGCTTGCTTTGACGATAGCTTCAGTTGATTGAGGAAATGACAGATTGAATTTTTGTCGGTCCTGACAACGAATTTGACCCCTAAGAGGTATTGTCTCCAGGCCCTCAAGCAGTGGACTATTGCTAACATCTCTTCCTCAAAGGCAGCATACCTCCTTTTAGCATCATTCAACTTTCGACTCCCGTATGCAATGGGGTGGCCATCTTGGAGAAGCACTCCTCCTAGTGCAAAGTCTGAAGCAGGAGTCTCGACTTTAAATGGTCTTGCAAATTTGCAATCCCAAGCACCGGCCCCTCCATCATTGCCTTCTTCAAGCTTTAGAACGCAACTTGACACTCTGAAGTCTAATTCCACGATTGATTCTTCTTTAGTAGTTCAGTCAGGGGTCCTGTCCTTTTCGAGAATCCTCTTACAAATTGCCTATAGTAGTTGGCTAGGGTGAGGAATGAGCGTAACTCTGCGATGGATGTTGGCACTTTTCATTCTTGAATGAGTTTCGTTTTCCCATCTTCCATACCTATTTGTCCGCATTTTATGACATGGCCTAGGAAACTGATACGCTATTAAGTGCAAGAACACTTTTCCCGCTTAACGTACAATTGGTTCTGCTTGAGCTTCTTGAAAACAAGTTGTAAATGTATCTGGTGTTCTTCCATGGTTGGGCCGTAGACAACTATGTCATCAGATAGACAACCACAAACTTATCGAGATATTCGTGAAACACCTGGTTCATTAAAGTGCAGAAGATGGCGGGAGCGTTCGTGAGGCCGAAGGGGATGACAAGGAATTCAAAGGCCCCATACCGAGTGATGCAGGTCGTCTTTGGTTCGTCTCCCTCTGCAATGCACACTTGATAGTACCCACATCGCAGATCCAGTTTCGAGAAGTATTTTGCCCAATGAAGCTGATCAAAAAGGTTTTTGATGATGGGCAAAGGATACTTGTTGTGGACTGTGAGCTTGTTCAACGCTCGATAGTCGATGCATAGGCGGAGGATTCCGTCTTTCTTCTTCTAAAACAGGACTGAGGCACCATAGGGAGCTTTTGCTAGGCGGATGAATCCAGCGTTTAACAATTCGTCAAGTTCTTTTCTTAGCGCAGCTAACTCGGGAGGAGCCATTTGATAGGCATTCTTGGATGGCAGTTTCGCCCCTGGTAGTAGTTCAATGTCATGGTCTATCCCTCATCTTGGAGGTAGGCCTTGGGCAGGCTATCTGGCATTACATCTGCATACACGTCTAAGACATGTTGGATTTCTCGAGGAATCGATTCTTCAGAGTTTCTGTCTTCCACTACGGTAATGGCCATGAATGTTGGTTCATCGTGAGCAAGACCTTTCTTTAGTTGGAGGCTGATATCATCTTCACTCCGCTTGGTTGTTTGATGCTTGTCTACATGACGGTGGCGTCAGAACCCGTTACAATCAGACAGTTAACGAGAGGCATGGGAATGACTTCGTGTTCCAGGAGCAATTCTATTCCCAATACCACGTCGAAGTCATCCATACGCACTATCACAAAATTAACTTGTCTACTCTATGTCCCCAGTTTTACTGTGATTCTCTTAACAACTCCCTGAAGGGATCAGATCTCACAGCGGAAGCGCACGAACGCGTGTGCTTCGATCTTATTTTAGAATTACAACAAAGAAAAGATAGAAGCATGAGTAAAAAGGAAGTAAGTGATACATACCTTTGTAGACACCTCTACAATGTAGACACTAACACCACCACAAAGTCTTCCTCACTTAAGAACTCGATTTGTGGGAACCGTCTTATAATTGAAACGGAAATTGAGAAATCGAGAGAGAGATTTTCTTGTTAGAGTTTCGGAAACTCTATCAACCGACGTTCAGGCGTCAAAGGAAGGGGATAACCTCCCTTTCTATAAGGGAGGAAGAGTGGTGGGGAAGTCCTCACCACTTTCCCACTCCCCACCATTAAAGATCTTCCCACCTTGGAAGGTTTTCCTCCTATTTCATTTCTTTTTTTTTCCTTTTATTTTAATTAAAATAATAATTAATTAAATCTAATTTAATTAATTACAAAAAATAATTATTAATTTAATTAAATTAAATCTAATTTAATTTAACCAAATTAATATATTTCATTAATTTAATTAAATCATATTAATTAAATTAAACTTAAATTAATCAACTATATTAAAATCAAATTCTAATATCCATCTCTCTCATCAGTTTCAATCCAATTCAAAATTAACTTTATATTATAATGTCTCAACATACATTATATTAATTGCATCTCATACAATTAACTTTTATTCCCTTTAACTAATTTGAACAATCCAAAATTTTTTCTAAAGACTAAAAATTCTTAACTATCCTTTACGAGTTAGCAAGGAGACCTTATGGACCTACATATCAGAAGCTTCAACGATACATGATTAATTGATTAAACTAATTAACCATATTAACCATAATAATCAACATTCGTTAACTGTTGGTCACTCCACTAAAGACCCACAGTTGGACTCTTCTCACTGTATAATATTTTGCATCCACGGATTTTAACCATTAATGGTAAGTCAATCTTTCACGAGTGTTTGTAACCACAGCTGGGTCAAATTACCATTTTACCCCTGTGTTACATCTTGTACCTTAAGTACCACTGATACTCTAATGAACAACTCGGTTGGTCTTAACACATATAAGTTGTTTTCGAGTTTTGCAGAACAAATGTCAACACCATTTCGTATAATGAACACTTCATTTAATGAAAAGAAAATAACATAACATTGTTCCAGTAGACAAGAAATTGAAAATAAGTTTCTCTTTATTTTGGGAACTACATACACATTATCTAATAATATATATGTATTCTTGTCTAAAAACAACTTTAGGTCTCCCATCGCAACTGCTGAGATGACACTATAACAAATCTTGGTTTTAATGTCGGACAAAAAAAATGCGAAGGAAACGATGTCGGACAAGAAAAACACTAAGGCAACCATGTCAGACACGCTAAAAAACAAGCCCAATTTTAATTTTAATTTTTTTTAAGTATCCATGTGGGGCCTAGCCTGCCATTGTAAGTTTAGTTTTAATGGCCGGTCATGCCCGCCATTAAAAGTTCCCCATTTTAACCTTAAATTCATTTTTCACCCAAAAATTTTGCACTCGAAAATTTTTTGCCTCTCAACTACCTTTGCCGCGTGAAACCCTTTCTACCCTATCCCAAACCTTGCTCCATTATCGTGGGAAGGGGTGCAAATGACTACGTACGGAGGCGCGAGTGACGATCCAACGTTGAGGAGCAATTTTCCGATGGTAGAGAGCGACAATCTACAGCGGCAAGCTTCGATTCGACGACAGGGAGCGAATATATTCGGCAGTAGCGACAATATCAAAGGTTCCTTTCTTCCTTATCTTCCCTTCCCTCATATTCGCTCGTTTTCATATTCTTCTAGTTTTATTAGTAATTTTCGTCAGGTTTGAAGTTTGGGTTATTTTATCGAGTTGGCTCGTTATCATCTCTGTTGCACGAATGAAATAAAAAATAAAGGGGACTAGGTTATTTCGTTATTGGGTTTGGAAGAGGACTTGCTCTTGTTGCCATGGCTCGAGGTTGTTGGCCCCGGCTTCCAATGTCTTGCGAGCATAAGACGCTTAGAGAGTAACGTAAAGACATTAGTGGGTGAGGAAAATCATCGAAGACATCTAGTATACTTCATTTACTTATAAAATGTCAACTAGAAACAGAAGGTCCACGTCTAAACCAATTAAGGCCTATAAGAGGGAACAATGAACAAATTTGTTGGGTACTCTGTCCTAAAACTCGTAGTTTGTAAACAGTGAACATTAATGTGAGGTTATTCAGACAAATGTTGTTAAATGAAAGTGAATTTGTTTTTTAATAAATCCAATAAACTACGTACCCTTGGCTATTATAATGAGTACTTGGACTTTATGTGGAGGCATAAACTGGATCAAGTTCAACTAAATAGCCTAAATAGTCTATAGTACATGGATCAAGTTGGGTACCTTTTCCTGGAGACACTATTGAATACGGCCCGCTTTATGATTGTTACAAATGTTGTAAGGTGTCATAAACGAAGTGATCCTGATTCGCTCGTGTAGAAACATGTGAGCGGGGGTGTTCTACACAATGAGATTGTGTAAGACTTACCCTGAAATAATCACTGTTACGTATTAACACCATTTACGGATAACACTGATTAATTTCGTTTATCGATGACCTAAATAACTTGATCTAAATCATGATTCATCTATGAACTCCTATTTATTCAGGATTCTCCCTTGATCTGCATAGGTGAGAGTGAGCTCATCATCGCTGCTCAATATGCCTCCCATTTCAAGGATAAGACTGGGTAG

mRNA sequence

ATGGGTTCTTCTGATGGTGGTGCTTTTTTAGCAATTGTAACAGAACTGAGCCACGTCAAGCATATAGATCCAGTTCATTTTCTAGACATCGATAAAATGGCTGAGGGTCGCATGTTTGCTCTTTCTGCTAAGGGCGTCTGCTGCTTGATTCGCACGACTTGGCTTATGTTCGAACTGAAAATCAAATTCGGCAAGGCCCTCAAGCAGTGGACTATTGCTAACATCTCTTCCTCAAAGGCAGCATACCTCCTTTTAGCATCATTCAACTTTCGACTCCCGTATGCAATGGGGTGGCCATCTTGGAGAAGCACTCCTCCTAGTGCAAAGTCTGAAGCAGGAGTCTCGACTTTAAATGGTCTTGCAAATTTGCAATCCCAAGCACCGGCCCCTCCATCATTGCCTTCTTCAAGCTTTAGAACGCAACTTGACACTCTGAAGTCTAATTCCACGATTGATTCTTCTTTAGTAGTTCAGTCAGGGGCCTTGGGCAGGCTATCTGGCATTACATCTGCATACACGTCTAAGACATGTTGGATTTCTCGAGGAATCGATTCTTCAGAGTTTCTGTCTTCCACTACGGTAATGGCCATGAATGTTGGTTCATCAACCCGTTACAATCAGACAGTTAACGAGAGGCATGGGAATGACTTCGTGTTCCAGGAGCAATTCTATTCCCAATACCACGTCGAAGTCATCCATACGCACTATCACAAAATTAACTTGTCTACTCTATGTCCCCAGTTTTACTGTGATTCTCTTAACAACTCCCTGAAGGGATCAGATCTCACAGCGGAAGCGCACGAACGCGTGTGCTTCGATCTTATTTTAGAATTACAACAAAGAAAAGATAGAAGCATGAGTAAAAAGGAAGATTCTCCCTTGATCTGCATAGGTGAGAGTGAGCTCATCATCGCTGCTCAATATGCCTCCCATTTCAAGGATAAGACTGGGTAG

Coding sequence (CDS)

ATGGGTTCTTCTGATGGTGGTGCTTTTTTAGCAATTGTAACAGAACTGAGCCACGTCAAGCATATAGATCCAGTTCATTTTCTAGACATCGATAAAATGGCTGAGGGTCGCATGTTTGCTCTTTCTGCTAAGGGCGTCTGCTGCTTGATTCGCACGACTTGGCTTATGTTCGAACTGAAAATCAAATTCGGCAAGGCCCTCAAGCAGTGGACTATTGCTAACATCTCTTCCTCAAAGGCAGCATACCTCCTTTTAGCATCATTCAACTTTCGACTCCCGTATGCAATGGGGTGGCCATCTTGGAGAAGCACTCCTCCTAGTGCAAAGTCTGAAGCAGGAGTCTCGACTTTAAATGGTCTTGCAAATTTGCAATCCCAAGCACCGGCCCCTCCATCATTGCCTTCTTCAAGCTTTAGAACGCAACTTGACACTCTGAAGTCTAATTCCACGATTGATTCTTCTTTAGTAGTTCAGTCAGGGGCCTTGGGCAGGCTATCTGGCATTACATCTGCATACACGTCTAAGACATGTTGGATTTCTCGAGGAATCGATTCTTCAGAGTTTCTGTCTTCCACTACGGTAATGGCCATGAATGTTGGTTCATCAACCCGTTACAATCAGACAGTTAACGAGAGGCATGGGAATGACTTCGTGTTCCAGGAGCAATTCTATTCCCAATACCACGTCGAAGTCATCCATACGCACTATCACAAAATTAACTTGTCTACTCTATGTCCCCAGTTTTACTGTGATTCTCTTAACAACTCCCTGAAGGGATCAGATCTCACAGCGGAAGCGCACGAACGCGTGTGCTTCGATCTTATTTTAGAATTACAACAAAGAAAAGATAGAAGCATGAGTAAAAAGGAAGATTCTCCCTTGATCTGCATAGGTGAGAGTGAGCTCATCATCGCTGCTCAATATGCCTCCCATTTCAAGGATAAGACTGGGTAG

Protein sequence

MGSSDGGAFLAIVTELSHVKHIDPVHFLDIDKMAEGRMFALSAKGVCCLIRTTWLMFELKIKFGKALKQWTIANISSSKAAYLLLASFNFRLPYAMGWPSWRSTPPSAKSEAGVSTLNGLANLQSQAPAPPSLPSSSFRTQLDTLKSNSTIDSSLVVQSGALGRLSGITSAYTSKTCWISRGIDSSEFLSSTTVMAMNVGSSTRYNQTVNERHGNDFVFQEQFYSQYHVEVIHTHYHKINLSTLCPQFYCDSLNNSLKGSDLTAEAHERVCFDLILELQQRKDRSMSKKEDSPLICIGESELIIAAQYASHFKDKTG
Homology
The following BLAST results are available for this feature:
BLAST of Moc09g27850.1 vs.
Match NameE-valueIdentityDescription
BLAST of Moc09g27850.1 vs.
Match NameE-valueIdentityDescription
BLAST of Moc09g27850.1 vs.
Match NameE-valueIdentityDescription
BLAST of Moc09g27850.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Moc09g27850Moc09g27850gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Moc09g27850.1.exon6Moc09g27850.1.exon6exon
Moc09g27850.1.exon5Moc09g27850.1.exon5exon
Moc09g27850.1.exon4Moc09g27850.1.exon4exon
Moc09g27850.1.exon3Moc09g27850.1.exon3exon
Moc09g27850.1.exon2Moc09g27850.1.exon2exon
Moc09g27850.1.exon1Moc09g27850.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Moc09g27850.1cds.Moc09g27850.1_6CDS
cds.Moc09g27850.1cds.Moc09g27850.1_5CDS
cds.Moc09g27850.1cds.Moc09g27850.1_4CDS
cds.Moc09g27850.1cds.Moc09g27850.1_3CDS
cds.Moc09g27850.1cds.Moc09g27850.1_2CDS
cds.Moc09g27850.1cds.Moc09g27850.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Moc09g27850.1Moc09g27850.1-proteinpolypeptide