Moc08g40410.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g40410.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Cytochrome c oxidase subunit
Location	chr8: 30980875 .. 30983266 (-)
Sequence length	267
RNA-Seq Expression	Moc08g40410.1
Synteny	Moc08g40410.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAAGTAAGCTTCGTTTCTCTCTCTCTCTGTTTAGTTGCACGAAAATCAACCATAGTGAATCAATTTTTTCTTTTTTATTTGATACTCTGTATTTATCATTTCCCTTTTTCCAATCATAGACGGGCGGAATAGGTGCCCGCGATTTGGATGCAATTGTCGTTTTATCTATATGAAAAATATGTCTCCTCGTAACCCTTGTTTTATTATCTTTTTTAACTGTGATTTTGTTCGTATTAGACGTATAATCTGAATTTCTAGTTTGAAGGAATGATGTTGCTGCTTTTTCTTCGGTGCTTTCTGTAAACTAGCTTCGCTGGCACAATTTCCCACATAGTTGTAGGACTTAAAATTCTTAGGATTTTAAGCCATGAAATTCTTCAACGCTTGTTGGATATATTGAAACTTTTATGTGTTACCTTTTGGTTATTTTTGGACACAATGACTCTGGAAGCTGCAGAACTGTTAGGAAAAAACAATGACTTTTCTTTATTTAAATGAGAAAGTATTGGTAAATAAATAAATTTAACAGCCGGAAAAAGAGAAGGAGAACGTTTTTTTGTTGATGTCGCTGATAAAGATGTGAAGTAGAATATCAACTTTAGAATGAATTTCCTTGTTTACAGTTGAAAAAACTACAAACTCCCTCTTGATTGTTATATCATTACTAAAATTAAGATTTACATCGTGAATAGTGCTCACGAGAGCAGGGAACTGTATATGTTAAATCTCACTATAGTTTCTTCTAAGAGGCAGATCAAATCTTGAATTGATTATCATTGAATCGATAGGAAAACAAGGATTCAATTTCAATTCAAATATTTTTTGTTGAAAGATAACTGACATAATTGTGGGAAAAAGAATTTGAAAAGAGGAGATGCAACACCATATATCCTGCCAAATACAAATTCCTTGACCATGGCCTTAGTTAGTATAGTAAACTGTCATAGGGAGAAAGAATTGATGCGTTAAGAAACATATTTTCAAAGGACAGTGTTCAGTGCTTATCCTGCCAACCTCTTAAGTCCACTTATTTTGAACTCCATATTTGCCATAGAAACCTAACCAGATTCACTGAAAAGCTGGTAATCCGTGCTAAAAACACCCAATAAAAATAATAGAAAAATAGTCAACAGTTTCTTTTGGAAGAAAAAATACTTCCATTAATAATAATGGATGATAAGACATGCGAAGGATGAGATCTCATCTCCATTAAAAGTTGAAAAAGGATAGTAAATAAAATTCTCAATACTCAATAATAGAGAAAGAGCAGAATCTCTTAAAACCTTGTCAATTGGGCATAATTTTAGGCATGAAATATATTTTTATGTTAAAAAGAATTCTGTTTTGCATGTTTATATTGTGTCTATCCATACTTCATACTTGACATTGTGCTCACCTTTAGAAAGATGGTAGGGGCGCGTTAGCGCTTTACTAATAGTTTTCGAAAGTTGACTATTAGCGATAATGTTTCTTGCTCTTGCCAATAATTGAAGATAGATGTCAGTTTGTATCTTGGTGTTTGTCATGGATTGAGGTATGGAAGGCACAGGGGCCTCTAGCCCAAATTAACCACACCTAACTGATAATTACAAAATTCTTAGAAATCAACCTCACAGGGAGGTATCGTTCCTCTCTAACCAAATTTCGCACGTAGTAGCAAGGAAACAAGCCTGCCACAAGAACCTACCCCTAGGGGTCGTTCTCTAGTCGGGATGTTTTTTGTATACCATTGTATATTTTTCATTTCTCTCAATGAAAGCTTGAGTTCTTGTAAAAAAAAAAGTGTTGGAATGTGCTGTTCGCTCATATTGGAAGAATGTTATTAGGAAAATGATTAGCAACTACTCATTTCTATTCAGATGAAAATTCAATGATGTGTATCTCTTTGTCGATCTGTTAAACAGATCTATGAAGTGAGTATTATAAGATGAGTGGCAGTCCTTCATCCAGATATTCATGTTCTCTTCAATCTCCATTCTAATTTTCTTTTCTTGTCCTATCCATTCTTGTTTGTCATCTCAGATAGAGCTGAAAACAGCACCTGCTGACTTCCGATTCCCTACAACAAATCAAACCAGGCACTGTTTCACTCGTTACATTGAGTTCCACAGGTGCATTTTTCTTATAACTTGGGATAAGAGTTCCAATGGAAAACAAAAGGGTCCACAGTCTTTCTCACTGTTAGTTTTCCCCTTAAATATGCGAAACTTTGTACAGGTGCCTGTCAGCCAAGGGTGAGGAGTCTGGTGAATGTGAAAGATTTGCAAAGTATTACCGGGCCCTTTGCCCCGGTGAATGGGTGAGATTCATTGTATTTGGTGTTGCTAAAAGTAAATTTAAATTTTCTGGTCCATTTTTCCGGCTCATATTGATGCATTTGTGCTAG

mRNA sequence

ATGGCCGAAATAGAGCTGAAAACAGCACCTGCTGACTTCCGATTCCCTACAACAAATCAAACCAGGCACTGTTTCACTCGTTACATTGAGTTCCACAGGTGCCTGTCAGCCAAGGGTGAGGAGTCTGGTGAATGTGAAAGATTTGCAAAGTATTACCGGGCCCTTTGCCCCGGTGAATGGGTGAGATTCATTGTATTTGGTGTTGCTAAAAGTAAATTTAAATTTTCTGGTCCATTTTTCCGGCTCATATTGATGCATTTGTGCTAG

Coding sequence (CDS)

ATGGCCGAAATAGAGCTGAAAACAGCACCTGCTGACTTCCGATTCCCTACAACAAATCAAACCAGGCACTGTTTCACTCGTTACATTGAGTTCCACAGGTGCCTGTCAGCCAAGGGTGAGGAGTCTGGTGAATGTGAAAGATTTGCAAAGTATTACCGGGCCCTTTGCCCCGGTGAATGGGTGAGATTCATTGTATTTGGTGTTGCTAAAAGTAAATTTAAATTTTCTGGTCCATTTTTCCGGCTCATATTGATGCATTTGTGCTAG

Protein sequence

MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVRFIVFGVAKSKFKFSGPFFRLILMHLC

Homology

[Close]

BLAST of Moc08g40410.1 vs. NCBI nr
Match: KAA8535396.1 (hypothetical protein F0562_030399 [Nyssa sinensis])

HSP 1 Score: 137.1 bits (344), Expect = 7.2e-29
Identity = 60/74 (81.08%), Postives = 66/74 (89.19%), Query Frame = 0


Query: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEW 60
          MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECE+FAKYYR+LCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECEKFAKYYRSLCPGEW 60

Query: 61 VRFIVFGVAKSKFK 75
           +F+  G    + K
Sbjct: 61 AKFVRTGFQIGQIK 74

[Close]

BLAST of Moc08g40410.1 vs. NCBI nr
Match: XP_022153389.1 (cytochrome c oxidase subunit 6b-2 [Momordica charantia])

HSP 1 Score: 136.7 bits (343), Expect = 9.5e-29
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEW 60
          MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEW 60

Query: 61 V 62
          V
Sbjct: 61 V 61

[Close]

BLAST of Moc08g40410.1 vs. NCBI nr
Match: XP_022997477.1 (cytochrome c oxidase subunit 6b-2 [Cucurbita maxima])

HSP 1 Score: 135.6 bits (340), Expect = 2.1e-28
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEW 60
          MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW 60

Query: 61 V 62
          V
Sbjct: 61 V 61

[Close]

BLAST of Moc08g40410.1 vs. NCBI nr
Match: XP_022969669.1 (cytochrome c oxidase subunit 6b-2-like [Cucurbita maxima])

HSP 1 Score: 135.6 bits (340), Expect = 2.1e-28
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEW 60
          MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW 60

Query: 61 V 62
          V
Sbjct: 61 V 61

[Close]

BLAST of Moc08g40410.1 vs. NCBI nr
Match: XP_038889175.1 (cytochrome c oxidase subunit 6b-2 isoform X2 [Benincasa hispida])

HSP 1 Score: 135.6 bits (340), Expect = 2.1e-28
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEW 60
          MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW 60

Query: 61 V 62
          V
Sbjct: 61 V 61

[Close]

BLAST of Moc08g40410.1 vs. ExPASy Swiss-Prot
Match: Q945L0 (Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.3e-28
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0


Query: 3  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWV 62
          EIELKTAPADFRFPTTNQTRHCFTRYIEFHRC +AKGEES +CERFAKYYRALCPGEWV
Sbjct: 4  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCPGEWV 62

[Close]

BLAST of Moc08g40410.1 vs. ExPASy Swiss-Prot
Match: Q9SUD3 (Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=2 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 2.9e-28
Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = 0


Query: 3  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWV 62
          EIELKTAPADFRFPTTNQTRHCFTRYIEFHRC +AKGE++ ECERFAKYYRALCPGEWV
Sbjct: 4  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCPGEWV 62

[Close]

BLAST of Moc08g40410.1 vs. ExPASy Swiss-Prot
Match: Q9S7L9 (Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.5e-24
Identity = 44/59 (74.58%), Postives = 57/59 (96.61%), Query Frame = 0


Query: 3   EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWV 62
           EI+L+TAPADFRFPTTNQTRHCFTRY+E+HRC++AKG+++ EC++FAK+YR+LCP EWV
Sbjct: 116 EIKLETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWV 174

[Close]

BLAST of Moc08g40410.1 vs. ExPASy Swiss-Prot
Match: O94581 (Cytochrome c oxidase subunit 12, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cox12 PE=3 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 8.4e-12
Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 8  TAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWV 62
          T   D RFP TNQT+HCF  YI++ RC+ AKGE+   C++F   Y++LCP EWV
Sbjct: 17 TVGFDARFPNTNQTKHCFQSYIDYFRCIKAKGEDFVPCKQFWHAYQSLCPMEWV 70

[Close]

BLAST of Moc08g40410.1 vs. ExPASy Swiss-Prot
Match: P14854 (Cytochrome c oxidase subunit 6B1 OS=Homo sapiens OX=9606 GN=COX6B1 PE=1 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 3.2e-11
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 7  KTAPADFRFPTTNQTRHCFTRYIEFHRC---LSAKGEESGECERFAKYYRALCPGEWV 62
          KTAP D RFP  NQTR+C+  Y++FHRC   ++AKG +   CE + + Y++LCP  WV
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWV 70

[Close]

BLAST of Moc08g40410.1 vs. ExPASy TrEMBL
Match: A0A5J5AZR1 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_030399 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.5e-29
Identity = 60/74 (81.08%), Postives = 66/74 (89.19%), Query Frame = 0


Query: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEW 60
          MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECE+FAKYYR+LCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECEKFAKYYRSLCPGEW 60

Query: 61 VRFIVFGVAKSKFK 75
           +F+  G    + K
Sbjct: 61 AKFVRTGFQIGQIK 74

[Close]

BLAST of Moc08g40410.1 vs. ExPASy TrEMBL
Match: A0A6J1DIX3 (Cytochrome c oxidase subunit OS=Momordica charantia OX=3673 GN=LOC111020894 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.6e-29
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEW 60
          MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEW 60

Query: 61 V 62
          V
Sbjct: 61 V 61

[Close]

BLAST of Moc08g40410.1 vs. ExPASy TrEMBL
Match: A0A6J1FBN5 (Cytochrome c oxidase subunit OS=Cucurbita moschata OX=3662 GN=LOC111443962 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.0e-28
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEW 60
          MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW 60

Query: 61 V 62
          V
Sbjct: 61 V 61

[Close]

BLAST of Moc08g40410.1 vs. ExPASy TrEMBL
Match: A0A6J1I3B0 (Cytochrome c oxidase subunit OS=Cucurbita maxima OX=3661 GN=LOC111468624 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.0e-28
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEW 60
          MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW 60

Query: 61 V 62
          V
Sbjct: 61 V 61

[Close]

BLAST of Moc08g40410.1 vs. ExPASy TrEMBL
Match: A0A6J1K554 (Cytochrome c oxidase subunit OS=Cucurbita maxima OX=3661 GN=LOC111492384 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.0e-28
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEW 60
          MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW 60

Query: 61 V 62
          V
Sbjct: 61 V 61

[Close]

BLAST of Moc08g40410.1 vs. TAIR 10
Match: AT5G57815.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 126.7 bits (317), Expect = 9.1e-30
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0


Query: 3  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWV 62
          EIELKTAPADFRFPTTNQTRHCFTRYIEFHRC +AKGEES +CERFAKYYRALCPGEWV
Sbjct: 4  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCPGEWV 62

[Close]

BLAST of Moc08g40410.1 vs. TAIR 10
Match: AT4G28060.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 125.6 bits (314), Expect = 2.0e-29
Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = 0


Query: 3  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWV 62
          EIELKTAPADFRFPTTNQTRHCFTRYIEFHRC +AKGE++ ECERFAKYYRALCPGEWV
Sbjct: 4  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCPGEWV 62

[Close]

BLAST of Moc08g40410.1 vs. TAIR 10
Match: AT1G22450.1 (cytochrome C oxidase 6B )

HSP 1 Score: 112.5 bits (280), Expect = 1.8e-25
Identity = 44/59 (74.58%), Postives = 57/59 (96.61%), Query Frame = 0


Query: 3   EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWV 62
           EI+L+TAPADFRFPTTNQTRHCFTRY+E+HRC++AKG+++ EC++FAK+YR+LCP EWV
Sbjct: 116 EIKLETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWV 174

[Close]

BLAST of Moc08g40410.1 vs. TAIR 10
Match: AT1G32710.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 64.7 bits (156), Expect = 4.3e-11
Identity = 24/64 (37.50%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 9   APADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVRFIVFGV 68
           A  + RFP TN+TRHCF R++++H+C+   G ++ +C     Y R++CP E V  I    
Sbjct: 59  AAVEERFPVTNETRHCFNRFMQYHKCIEKNGRDANDCNNLRDYVRSICPEELVSKIWLKS 118

Query: 69  AKSK 73
            ++K
Sbjct: 119 GRNK 122

The following BLAST results are available for this feature:

BLAST of Moc08g40410.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA8535396.1	7.2e-29	81.08	hypothetical protein F0562_030399 [Nyssa sinensis]	[more]
XP_022153389.1	9.5e-29	100.00	cytochrome c oxidase subunit 6b-2 [Momordica charantia]	[more]
XP_022997477.1	2.1e-28	98.36	cytochrome c oxidase subunit 6b-2 [Cucurbita maxima]	[more]
XP_022969669.1	2.1e-28	98.36	cytochrome c oxidase subunit 6b-2-like [Cucurbita maxima]	[more]
XP_038889175.1	2.1e-28	98.36	cytochrome c oxidase subunit 6b-2 isoform X2 [Benincasa hispida]	[more]

BLAST of Moc08g40410.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q945L0	1.3e-28	93.22	Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=...	[more]
Q9SUD3	2.9e-28	91.53	Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=...	[more]
Q9S7L9	2.5e-24	74.58	Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=...	[more]
O94581	8.4e-12	53.70	Cytochrome c oxidase subunit 12, mitochondrial OS=Schizosaccharomyces pombe (str...	[more]
P14854	3.2e-11	50.00	Cytochrome c oxidase subunit 6B1 OS=Homo sapiens OX=9606 GN=COX6B1 PE=1 SV=2	[more]

BLAST of Moc08g40410.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5J5AZR1	3.5e-29	81.08	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_030399 PE=4 SV=1	[more]
A0A6J1DIX3	4.6e-29	100.00	Cytochrome c oxidase subunit OS=Momordica charantia OX=3673 GN=LOC111020894 PE=3...	[more]
A0A6J1FBN5	1.0e-28	98.36	Cytochrome c oxidase subunit OS=Cucurbita moschata OX=3662 GN=LOC111443962 PE=3 ...	[more]
A0A6J1I3B0	1.0e-28	98.36	Cytochrome c oxidase subunit OS=Cucurbita maxima OX=3661 GN=LOC111468624 PE=3 SV...	[more]
A0A6J1K554	1.0e-28	98.36	Cytochrome c oxidase subunit OS=Cucurbita maxima OX=3661 GN=LOC111492384 PE=3 SV...	[more]

BLAST of Moc08g40410.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57815.1	9.1e-30	93.22	Cytochrome c oxidase, subunit Vib family protein	[more]
AT4G28060.1	2.0e-29	91.53	Cytochrome c oxidase, subunit Vib family protein	[more]
AT1G22450.1	1.8e-25	74.58	cytochrome C oxidase 6B	[more]
AT1G32710.1	4.3e-11	37.50	Cytochrome c oxidase, subunit Vib family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003213	Cytochrome c oxidase, subunit VIb	PFAM	PF02297	COX6B	coord: 14..62 e-value: 1.5E-13 score: 50.7
IPR003213	Cytochrome c oxidase, subunit VIb	CDD	cd00926	Cyt_c_Oxidase_VIb	coord: 3..61 e-value: 8.87458E-28 score: 93.9118
IPR036549	Cytochrome c oxidase, subunit VIb superfamily	GENE3D	1.10.10.140	Cytochrome c oxidase, subunit VIb	coord: 1..76 e-value: 1.6E-25 score: 90.8
IPR036549	Cytochrome c oxidase, subunit VIb superfamily	SUPERFAMILY	47694	Cytochrome c oxidase subunit h	coord: 4..62
None	No IPR available	PANTHER	PTHR46281	CYTOCHROME C OXIDASE SUBUNIT 6B	coord: 2..77
None	No IPR available	PANTHER	PTHR46281:SF8	CYTOCHROME C OXIDASE SUBUNIT 6B-2-RELATED	coord: 2..77
None	No IPR available	PROSITE	PS51808	CHCH	coord: 21..64 score: 12.913759

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc08g40410	Moc08g40410	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc08g40410.1.exon3	Moc08g40410.1.exon3	exon
Moc08g40410.1.exon2	Moc08g40410.1.exon2	exon
Moc08g40410.1.exon1	Moc08g40410.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc08g40410.1	cds.Moc08g40410.1_3	CDS
cds.Moc08g40410.1	cds.Moc08g40410.1_2	CDS
cds.Moc08g40410.1	cds.Moc08g40410.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc08g40410.1	Moc08g40410.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0045277	respiratory chain complex IV