Moc07g27140.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g27140.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Glycine-rich protein family
Location	chr7: 20233103 .. 20234892 (-)
Sequence length	537
RNA-Seq Expression	Moc07g27140.1
Synteny	Moc07g27140.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTCATGTTGTTGCGTTTTGCTAGAATCCCCATTTCTGCTGTTGTTGTCTTCTACCTCCTCAGTTCTTCCTATTTTTACGGTAATGTATTATTAAATGAAATTCAATCAATAGTTCATATCTCGTTTGAAAATAATTTTCAAAATCCTGTTTTTTGTTAAACAATAATAATTTTCAAGATCTATATATATAACATAAATTTTCAGGCTTTCTAACTTCTTCAAACCTCACAAACCCAAATTTATCACGACCACGAGCGAAGCATTCTATATATATATTTTATACTCTTGAGAAAACAAAATCAATTTATCAACTAAAATGCAGCTGTTGATAGGAAAGGGAGACGATGTGGAAGGCGATGGTGCAACAAGCGGTTCAATTGGTTACGAGGACCCACCCGAGATTGTTGCCAAAGCATTGCTTTGCTTCAATGACAAATATGTATGCCATACCAATGAATAGTTCAATGTTGTCAACAATATTTAGATGCTTATCGATTAAGCTAACCATCATTAAATTTTTGTTAGAGCTATTAAATTTTTAATCGTATTAAATTTTTAAATGATCGATTAAGTTAACCATCACTAAAAATATTTAAGTGCTTATGTTAGCACCTAAATATATATATAGCATTATTATGTTCTAATCATCATATTTTCAAATACTTTAATTAAATTTTTCTGTTATTTTTAGAATTTAAATTATTTGTTTCTTAAAAATGCAGATTTACAGGGCGTGTGAAGAATCGTGTAGATTAAAGGAGAGTGGGAATGTGGAGGTCCCAGTGGAGAAAACGGACGAATTCTGCAATGGGCCGTGTTTGGGTGAAACGCATTTAGTGCTTGATTGCATTAATGCCATTTTTACCAATTTCTTGTTTTACAATAGGGCCACTTTGCAGGATGTTAGGGACACCATCCAGGCTGGATGTGCCTATGGCCCACAAAGAGGTCATTTTTTTTTTCTTTTTAAATCTCGCCGAATATTTCAAAATGGTCCCTAATCTTTTAGAAAATTCTCAATCTAGTCATTCCAGGAATAATTATTAACAAAAAGTTACCAAGAATTTAATTTAGTGGTAATTGATATGACCAATAGGTTCTGAGTTTGAATTCCAACCTTCCTGTTGTACTAATATATATATATATATATATATATATATATATATAAAACCAATATGGTTAAAATATATATAAAATGTGAAAATGCTATTTGGATGCTACATGATCCATAAAACCCAATTTGCTCGTCATAAATTTTGACCTAACCGTCAATAAAATTCATTTCTTCCTACCTATCTAAATATGTAATTGTAGCAATAATCTAATGAAACATTGACTATTTTAATTCATTACTAAAATAATTTTTCTTTTTACCTAAGAATTTTTAATGCATTGATAGTAAACTTGAGAGTTTTGAAAGATAATGACCCAATTAAGAATTAATTCCAACATTATAGACCATTTGATATATTTAACCTATTTGACCAATAAATTTTAGAGTTATGTCTAATCGGTTCATGAATTTCGAAAAATATATAATAAATCAATAAATTTTCATTAAAGAAAAAGAAGTCCGTCAATGTAGGTTTAGCTCGACGATTAAAACAACTTGCTTCTTCACTAGAGGTCGTAGTTTTAATCCCTGATAAAGAAGTGTTACTGCAGGAAACTTCGATGTTACAAAGCATATAAGGGCTGAAAGAGGCAAAGCTTGCAGGGCTTCCAACAACGCAGTTCTTGGATTCAGCTTCATAATTTTAGGCTTTTTTTGTTCATTGCTTTGA

mRNA sequence

ATGGCTCTCATGTTGTTGCGTTTTGCTAGAATCCCCATTTCTGCTGTTGTTGTCTTCTACCTCCTCAGTTCTTCCTATTTTTACGGAAAGGGAGACGATGTGGAAGGCGATGGTGCAACAAGCGGTTCAATTGGTTACGAGGACCCACCCGAGATTGTTGCCAAAGCATTGCTTTGCTTCAATGACAAATATATTTACAGGGCGTGTGAAGAATCGTGTAGATTAAAGGAGAGTGGGAATGTGGAGGTCCCAGTGGAGAAAACGGACGAATTCTGCAATGGGCCGTGTTTGGGTGAAACGCATTTAGTGCTTGATTGCATTAATGCCATTTTTACCAATTTCTTGTTTTACAATAGGGCCACTTTGCAGGATGTTAGGGACACCATCCAGGCTGGATGTGCCTATGGCCCACAAAGAGGAAACTTCGATGTTACAAAGCATATAAGGGCTGAAAGAGGCAAAGCTTGCAGGGCTTCCAACAACGCAGTTCTTGGATTCAGCTTCATAATTTTAGGCTTTTTTTGTTCATTGCTTTGA

Coding sequence (CDS)

ATGGCTCTCATGTTGTTGCGTTTTGCTAGAATCCCCATTTCTGCTGTTGTTGTCTTCTACCTCCTCAGTTCTTCCTATTTTTACGGAAAGGGAGACGATGTGGAAGGCGATGGTGCAACAAGCGGTTCAATTGGTTACGAGGACCCACCCGAGATTGTTGCCAAAGCATTGCTTTGCTTCAATGACAAATATATTTACAGGGCGTGTGAAGAATCGTGTAGATTAAAGGAGAGTGGGAATGTGGAGGTCCCAGTGGAGAAAACGGACGAATTCTGCAATGGGCCGTGTTTGGGTGAAACGCATTTAGTGCTTGATTGCATTAATGCCATTTTTACCAATTTCTTGTTTTACAATAGGGCCACTTTGCAGGATGTTAGGGACACCATCCAGGCTGGATGTGCCTATGGCCCACAAAGAGGAAACTTCGATGTTACAAAGCATATAAGGGCTGAAAGAGGCAAAGCTTGCAGGGCTTCCAACAACGCAGTTCTTGGATTCAGCTTCATAATTTTAGGCTTTTTTTGTTCATTGCTTTGA

Protein sequence

MALMLLRFARIPISAVVVFYLLSSSYFYGKGDDVEGDGATSGSIGYEDPPEIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGNFDVTKHIRAERGKACRASNNAVLGFSFIILGFFCSLL

Homology

[Close]

BLAST of Moc07g27140.1 vs. NCBI nr
Match: XP_022138327.1 (uncharacterized protein LOC111009540 isoform X1 [Momordica charantia])

HSP 1 Score: 317.0 bits (811), Expect = 1.0e-82
Identity = 150/159 (94.34%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 20  YLLSSSYFYGKGDDVEGDGATSGSIGYEDPPEIVAKALLCFNDKYIYRACEESCRLKESG 79
           + ++     GKGDDVEGDGATSGSIGYEDPPEIVAKALLCFNDKYIYRACEESCRLKESG
Sbjct: 462 FTINGKLLIGKGDDVEGDGATSGSIGYEDPPEIVAKALLCFNDKYIYRACEESCRLKESG 521

Query: 80  NVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQR 139
           NVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQR
Sbjct: 522 NVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQR 581

Query: 140 GNFDVTKHIRAERGKACRASNNAVLGFSFIILGFFCSLL 179
           GNFDVTKHIRAERGKACRASNNAVLGFSFIILGFFCSLL
Sbjct: 582 GNFDVTKHIRAERGKACRASNNAVLGFSFIILGFFCSLL 620

[Close]

BLAST of Moc07g27140.1 vs. NCBI nr
Match: XP_038906636.1 (uncharacterized protein LOC120092583 [Benincasa hispida])

HSP 1 Score: 280.0 bits (715), Expect = 1.4e-71
Identity = 134/178 (75.28%), Postives = 150/178 (84.27%), Query Frame = 0


Query: 1   MALMLLRFARIPISAVVVFYLLSSSYFYGKGDDVEGDGATSGSIGYEDPPEIVAKALLCF 60
           MA++ L FARIPISA+++ YLL+   FYGK DD E  G+T  S+G+ DPPEIVAKALLCF
Sbjct: 1   MAIVFLHFARIPISAILILYLLTCGCFYGKCDDFE-SGSTGSSVGFVDPPEIVAKALLCF 60

Query: 61  NDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRA 120
           ND+YIY ACEESCRLKESGN+EVP EKT+E+CNGPCL ETHLVLDCIN IF+NFLFYNRA
Sbjct: 61  NDRYIYSACEESCRLKESGNLEVPQEKTEEYCNGPCLSETHLVLDCINGIFSNFLFYNRA 120

Query: 121 TLQDVRDTIQAGCAYGPQRGNFDVTKHIRAERGKACRASNNAVLGFSFIILGFFCSLL 179
           TLQDVRDTIQAGC YGPQRGNFDV +HI+AERG ACRASN AVLGF   I G F  LL
Sbjct: 121 TLQDVRDTIQAGCGYGPQRGNFDVLEHIKAERGNACRASNKAVLGFCLFIWGLFSLLL 177

[Close]

BLAST of Moc07g27140.1 vs. NCBI nr
Match: XP_008458378.1 (PREDICTED: uncharacterized protein LOC103497804 [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 1.8e-71
Identity = 134/178 (75.28%), Postives = 151/178 (84.83%), Query Frame = 0


Query: 1   MALMLLRFARIPISAVVVFYLLSSSYFYGKGDDVEGDGATSGSIGYEDPPEIVAKALLCF 60
           MAL  L +AR+P+SA+++FYLL+   FYGK DD E  G+T GS+G+EDPPEIVAKALLCF
Sbjct: 20  MALFFLHYARVPLSAILLFYLLTYGCFYGKCDDFE-SGSTGGSVGFEDPPEIVAKALLCF 79

Query: 61  NDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRA 120
           ND+YIY ACEES RLKESGN+EVP+EKT+E+CNGPCL ET LVLDCIN IF+NFLFYNRA
Sbjct: 80  NDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCINGIFSNFLFYNRA 139

Query: 121 TLQDVRDTIQAGCAYGPQRGNFDVTKHIRAERGKACRASNNAVLGFSFIILGFFCSLL 179
           TLQDVRDTI AGC YGPQRGNFDV +HI AERG ACRASN A LGFSF ILG F  LL
Sbjct: 140 TLQDVRDTIHAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFILGLFSLLL 196

[Close]

BLAST of Moc07g27140.1 vs. NCBI nr
Match: XP_023514279.1 (uncharacterized protein LOC111778597 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276.9 bits (707), Expect = 1.2e-70
Identity = 136/178 (76.40%), Postives = 150/178 (84.27%), Query Frame = 0


Query: 1   MALMLLRFARIPISAVVVFYLLSSSYFYGKGDDVEGDGATSGSIGYEDPPEIVAKALLCF 60
           M L+   F RI ISAV +FYLL+SSY YGKGDD EG  A+SG +GYEDPPEIVAKALLCF
Sbjct: 1   MPLVFFPFPRISISAVALFYLLTSSYLYGKGDDAEG-VASSGFVGYEDPPEIVAKALLCF 60

Query: 61  NDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRA 120
           NDKYIY ACEES RLK SGNVEVP+E+T+E+CNGPCLGETHLVLDCI+ IF+NFLFYN+A
Sbjct: 61  NDKYIYSACEESYRLKASGNVEVPLERTEEYCNGPCLGETHLVLDCIDGIFSNFLFYNKA 120

Query: 121 TLQDVRDTIQAGCAYGPQRGNFDVTKHIRAERGKACRASNNAVLGFSFIILGFFCSLL 179
           TLQDVRDTI AGC YGPQRGNFDV +HIRAE GKA RASN  V+GFSFIIL  F   L
Sbjct: 121 TLQDVRDTIHAGCGYGPQRGNFDVLEHIRAETGKAWRASNKTVIGFSFIILSLFSLFL 177

[Close]

BLAST of Moc07g27140.1 vs. NCBI nr
Match: XP_023000051.1 (uncharacterized protein LOC111494359 [Cucurbita maxima])

HSP 1 Score: 275.0 bits (702), Expect = 4.5e-70
Identity = 136/178 (76.40%), Postives = 149/178 (83.71%), Query Frame = 0


Query: 1   MALMLLRFARIPISAVVVFYLLSSSYFYGKGDDVEGDGATSGSIGYEDPPEIVAKALLCF 60
           MAL+   F RI ISAV VFYLL+S Y YGKGDD EG  A+SG +GYEDPPEIVAKAL CF
Sbjct: 18  MALVFFPFTRISISAVAVFYLLTSCYLYGKGDDAEG-VASSGFVGYEDPPEIVAKALRCF 77

Query: 61  NDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRA 120
           NDKYIY ACEES RLK SGNVEVP+E+T+E+CNGPCLGETHLVLDCI+ IF+NFLFYN+A
Sbjct: 78  NDKYIYSACEESYRLKASGNVEVPLERTEEYCNGPCLGETHLVLDCIDGIFSNFLFYNKA 137

Query: 121 TLQDVRDTIQAGCAYGPQRGNFDVTKHIRAERGKACRASNNAVLGFSFIILGFFCSLL 179
           TLQDVRDTI AGC YGPQRGNFDV +HIRAE  KA RASN  V+GFSFIILG F   L
Sbjct: 138 TLQDVRDTIHAGCGYGPQRGNFDVLEHIRAETDKAWRASNKIVIGFSFIILGVFSLFL 194

[Close]

BLAST of Moc07g27140.1 vs. ExPASy TrEMBL
Match: A0A6J1CAS9 (uncharacterized protein LOC111009540 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009540 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.0e-83
Identity = 150/159 (94.34%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 20  YLLSSSYFYGKGDDVEGDGATSGSIGYEDPPEIVAKALLCFNDKYIYRACEESCRLKESG 79
           + ++     GKGDDVEGDGATSGSIGYEDPPEIVAKALLCFNDKYIYRACEESCRLKESG
Sbjct: 462 FTINGKLLIGKGDDVEGDGATSGSIGYEDPPEIVAKALLCFNDKYIYRACEESCRLKESG 521

Query: 80  NVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQR 139
           NVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQR
Sbjct: 522 NVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQR 581

Query: 140 GNFDVTKHIRAERGKACRASNNAVLGFSFIILGFFCSLL 179
           GNFDVTKHIRAERGKACRASNNAVLGFSFIILGFFCSLL
Sbjct: 582 GNFDVTKHIRAERGKACRASNNAVLGFSFIILGFFCSLL 620

[Close]

BLAST of Moc07g27140.1 vs. ExPASy TrEMBL
Match: A0A1S3C8B8 (uncharacterized protein LOC103497804 OS=Cucumis melo OX=3656 GN=LOC103497804 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 8.8e-72
Identity = 134/178 (75.28%), Postives = 151/178 (84.83%), Query Frame = 0


Query: 1   MALMLLRFARIPISAVVVFYLLSSSYFYGKGDDVEGDGATSGSIGYEDPPEIVAKALLCF 60
           MAL  L +AR+P+SA+++FYLL+   FYGK DD E  G+T GS+G+EDPPEIVAKALLCF
Sbjct: 20  MALFFLHYARVPLSAILLFYLLTYGCFYGKCDDFE-SGSTGGSVGFEDPPEIVAKALLCF 79

Query: 61  NDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRA 120
           ND+YIY ACEES RLKESGN+EVP+EKT+E+CNGPCL ET LVLDCIN IF+NFLFYNRA
Sbjct: 80  NDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCINGIFSNFLFYNRA 139

Query: 121 TLQDVRDTIQAGCAYGPQRGNFDVTKHIRAERGKACRASNNAVLGFSFIILGFFCSLL 179
           TLQDVRDTI AGC YGPQRGNFDV +HI AERG ACRASN A LGFSF ILG F  LL
Sbjct: 140 TLQDVRDTIHAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFILGLFSLLL 196

[Close]

BLAST of Moc07g27140.1 vs. ExPASy TrEMBL
Match: A0A6J1KET4 (uncharacterized protein LOC111494359 OS=Cucurbita maxima OX=3661 GN=LOC111494359 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.2e-70
Identity = 136/178 (76.40%), Postives = 149/178 (83.71%), Query Frame = 0


Query: 1   MALMLLRFARIPISAVVVFYLLSSSYFYGKGDDVEGDGATSGSIGYEDPPEIVAKALLCF 60
           MAL+   F RI ISAV VFYLL+S Y YGKGDD EG  A+SG +GYEDPPEIVAKAL CF
Sbjct: 18  MALVFFPFTRISISAVAVFYLLTSCYLYGKGDDAEG-VASSGFVGYEDPPEIVAKALRCF 77

Query: 61  NDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRA 120
           NDKYIY ACEES RLK SGNVEVP+E+T+E+CNGPCLGETHLVLDCI+ IF+NFLFYN+A
Sbjct: 78  NDKYIYSACEESYRLKASGNVEVPLERTEEYCNGPCLGETHLVLDCIDGIFSNFLFYNKA 137

Query: 121 TLQDVRDTIQAGCAYGPQRGNFDVTKHIRAERGKACRASNNAVLGFSFIILGFFCSLL 179
           TLQDVRDTI AGC YGPQRGNFDV +HIRAE  KA RASN  V+GFSFIILG F   L
Sbjct: 138 TLQDVRDTIHAGCGYGPQRGNFDVLEHIRAETDKAWRASNKIVIGFSFIILGVFSLFL 194

[Close]

BLAST of Moc07g27140.1 vs. ExPASy TrEMBL
Match: A0A6J1EX17 (uncharacterized protein LOC111436937 OS=Cucurbita moschata OX=3662 GN=LOC111436937 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.0e-69
Identity = 134/178 (75.28%), Postives = 148/178 (83.15%), Query Frame = 0


Query: 1   MALMLLRFARIPISAVVVFYLLSSSYFYGKGDDVEGDGATSGSIGYEDPPEIVAKALLCF 60
           MAL+   F R+ ISAV VFYLL+S Y  GKGDD EG  A+SG +GYEDPPEIVAKAL CF
Sbjct: 18  MALVFFPFPRMSISAVAVFYLLTSCYLTGKGDDAEG-VASSGFVGYEDPPEIVAKALRCF 77

Query: 61  NDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRA 120
           NDKYIY ACEES RLK SGNVEVP+EKT+E+C+GPCLGETHLVLDCI+ IF+NFLFYN+A
Sbjct: 78  NDKYIYSACEESYRLKASGNVEVPLEKTEEYCSGPCLGETHLVLDCIDGIFSNFLFYNKA 137

Query: 121 TLQDVRDTIQAGCAYGPQRGNFDVTKHIRAERGKACRASNNAVLGFSFIILGFFCSLL 179
           TLQDVRDTI AGC YGPQRGNFDV +HIRAE  KA RASN  V+GFSFIILG F   L
Sbjct: 138 TLQDVRDTIHAGCGYGPQRGNFDVLEHIRAETDKAWRASNKTVIGFSFIILGLFSLFL 194

[Close]

BLAST of Moc07g27140.1 vs. ExPASy TrEMBL
Match: A0A0A0KCE5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G311000 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.3e-67
Identity = 129/178 (72.47%), Postives = 147/178 (82.58%), Query Frame = 0


Query: 1   MALMLLRFARIPISAVVVFYLLSSSYFYGKGDDVEGDGATSGSIGYEDPPEIVAKALLCF 60
           MAL  L FAR+P+SA+++FYLL+    YGK DD E  G+T  S+G+EDPPEIVAKALLCF
Sbjct: 1   MALFFLHFARVPLSAILLFYLLT----YGKCDDFE-SGSTGSSVGFEDPPEIVAKALLCF 60

Query: 61  NDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIFTNFLFYNRA 120
           ND+YIY ACEES RLKESGN+EVP+EKT+E+CNGPCL ET LVLDCI+ IF+NFLFYNRA
Sbjct: 61  NDRYIYSACEESYRLKESGNLEVPLEKTEEYCNGPCLSETELVLDCISGIFSNFLFYNRA 120

Query: 121 TLQDVRDTIQAGCAYGPQRGNFDVTKHIRAERGKACRASNNAVLGFSFIILGFFCSLL 179
           TLQDVRDT+ AGC YGPQRGNFDV +HI AERG ACRASN A LGFSF IL     LL
Sbjct: 121 TLQDVRDTVHAGCGYGPQRGNFDVLEHINAERGNACRASNMAALGFSFFILALLSLLL 173

[Close]

BLAST of Moc07g27140.1 vs. TAIR 10
Match: AT5G49350.1 (Glycine-rich protein family )

HSP 1 Score: 152.1 bits (383), Expect = 4.1e-37
Identity = 67/135 (49.63%), Postives = 93/135 (68.89%), Query Frame = 0


Query: 36  GDGATSGSIGYEDPPEIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGP 95
           G G   G +G EDPPEIVAKAL C N+K+IYR C+ES RL  +G++ +P+ +T+EFC GP
Sbjct: 164 GGGLGGGGLGGEDPPEIVAKALECLNEKHIYRECDESWRLTLNGDLNIPLGRTEEFCEGP 223

Query: 96  CLGETHLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGNFDVTKHIRAERGKA 155
           C  ETHL L+CI  I  ++ F+NRAT+ D+R+T+++GC+YGP+RG F+V +HI  E   A
Sbjct: 224 CFSETHLALNCIEEIIHHYRFFNRATIHDIRETLKSGCSYGPERGVFNVLEHIEDEEENA 283

Query: 156 CRASNNAVLGFSFII 171
                +      FII
Sbjct: 284 SEKIKSRFGPLLFII 298

[Close]

BLAST of Moc07g27140.1 vs. TAIR 10
Match: AT5G49350.2 (Glycine-rich protein family )

HSP 1 Score: 152.1 bits (383), Expect = 4.1e-37
Identity = 67/135 (49.63%), Postives = 93/135 (68.89%), Query Frame = 0


Query: 36  GDGATSGSIGYEDPPEIVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGP 95
           G G   G +G EDPPEIVAKAL C N+K+IYR C+ES RL  +G++ +P+ +T+EFC GP
Sbjct: 87  GGGLGGGGLGGEDPPEIVAKALECLNEKHIYRECDESWRLTLNGDLNIPLGRTEEFCEGP 146

Query: 96  CLGETHLVLDCINAIFTNFLFYNRATLQDVRDTIQAGCAYGPQRGNFDVTKHIRAERGKA 155
           C  ETHL L+CI  I  ++ F+NRAT+ D+R+T+++GC+YGP+RG F+V +HI  E   A
Sbjct: 147 CFSETHLALNCIEEIIHHYRFFNRATIHDIRETLKSGCSYGPERGVFNVLEHIEDEEENA 206

Query: 156 CRASNNAVLGFSFII 171
                +      FII
Sbjct: 207 SEKIKSRFGPLLFII 221

[Close]

BLAST of Moc07g27140.1 vs. TAIR 10
Match: AT1G56320.1 (BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT5G49350.2); Has 60 Blast hits to 60 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 115.9 bits (289), Expect = 3.3e-26
Identity = 48/93 (51.61%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 52  IVAKALLCFNDKYIYRACEESCRLKESGNVEVPVEKTDEFCNGPCLGETHLVLDCINAIF 111
           +V +A  CFN+  +YR C E+ RL + G  +VP E+TD FCNGPC  ET LVL CIN++ 
Sbjct: 39  LVQRAAFCFNNNLLYRGCNEAFRLNQQGEFKVPPEETDRFCNGPCSAETELVLTCINSVM 98

Query: 112 TNFLFYNRATLQDVRDTIQAGCAYGPQRGNFDV 145
           ++F+FYNRAT +DVR+ ++ GC+    RGNF+V
Sbjct: 99  SDFVFYNRATPRDVRNALRGGCSSSFTRGNFNV 131

The following BLAST results are available for this feature:

BLAST of Moc07g27140.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138327.1	1.0e-82	94.34	uncharacterized protein LOC111009540 isoform X1 [Momordica charantia]	[more]
XP_038906636.1	1.4e-71	75.28	uncharacterized protein LOC120092583 [Benincasa hispida]	[more]
XP_008458378.1	1.8e-71	75.28	PREDICTED: uncharacterized protein LOC103497804 [Cucumis melo]	[more]
XP_023514279.1	1.2e-70	76.40	uncharacterized protein LOC111778597 [Cucurbita pepo subsp. pepo]	[more]
XP_023000051.1	4.5e-70	76.40	uncharacterized protein LOC111494359 [Cucurbita maxima]	[more]

BLAST of Moc07g27140.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc07g27140.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAS9	5.0e-83	94.34	uncharacterized protein LOC111009540 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3C8B8	8.8e-72	75.28	uncharacterized protein LOC103497804 OS=Cucumis melo OX=3656 GN=LOC103497804 PE=...	[more]
A0A6J1KET4	2.2e-70	76.40	uncharacterized protein LOC111494359 OS=Cucurbita maxima OX=3661 GN=LOC111494359...	[more]
A0A6J1EX17	7.0e-69	75.28	uncharacterized protein LOC111436937 OS=Cucurbita moschata OX=3662 GN=LOC1114369...	[more]
A0A0A0KCE5	2.3e-67	72.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G311000 PE=4 SV=1	[more]

BLAST of Moc07g27140.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49350.1	4.1e-37	49.63	Glycine-rich protein family	[more]
AT5G49350.2	4.1e-37	49.63	Glycine-rich protein family	[more]
AT1G56320.1	3.3e-26	51.61	BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34366:SF2	OS07G0289901 PROTEIN	coord: 1..171
None	No IPR available	PANTHER	PTHR34366	OS07G0289901 PROTEIN-RELATED	coord: 1..171

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc07g27140	Moc07g27140	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc07g27140.1.exon4	Moc07g27140.1.exon4	exon
Moc07g27140.1.exon3	Moc07g27140.1.exon3	exon
Moc07g27140.1.exon2	Moc07g27140.1.exon2	exon
Moc07g27140.1.exon1	Moc07g27140.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc07g27140.1	cds.Moc07g27140.1_4	CDS
cds.Moc07g27140.1	cds.Moc07g27140.1_3	CDS
cds.Moc07g27140.1	cds.Moc07g27140.1_2	CDS
cds.Moc07g27140.1	cds.Moc07g27140.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc07g27140.1	Moc07g27140.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding