Moc06g06140.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g06140.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Hydroxymethylbilane hydrolyase [cyclizing]
Location	chr6: 4443813 .. 4444580 (+)
Sequence length	768
RNA-Seq Expression	Moc06g06140.1
Synteny	Moc06g06140.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCCCTGTGGTGCCCCACCCTCACCGTCCAGCCCACTCCCCACGCCATCAAATCCCACATCCTTCCCCCAAATCTCGAATCCTTCTCCGCCGTCGCTTTCACTTCCCGCGCCGGAATTTCAGCTCTCCTCGACGCTGCAACTGAAATCGGCGAACCCTTGCTACCGTCGCAGGGCGAGACTTTTCTAATCGCTGCCCTAGGTAAGGATTCGGAGCTTCTCGACCATGGATTTATTTCCCAAATTTGCCCTAACGCGAGTAGAATTCAAGTCGTGCTCCCTAAAATAGCAACTCCGAGTGGTTTAGTGGAGGCTCTTGGAGTTGGAAACCGCCGGCGGGTTCTGTGTCCGGTTCCTCGCGTCGTGGGGCTGGAGGAGCCTCCGGTAGTTCCGAACTTCCTCCACGACCTGGAGGCGAACGGATGGGTTCCGGTTCGGGTCGATGCGTACGAGACCCGATGGGCCGGACCCGGGTGCGCGAGGCAGCTCGTGGAGAGAGATGAGAAATTGGATGCCATTGTGTTCACAAGTACTGGGGAAGTGGAGGGCCTGCTGAAAAGCTTGAGGGATTTAGGGTTCGAGTGGGAGACGATGAGAAAGAGGTGGCCGGAAATGGTGGTGGCCGCGCACGGGCCGGTGACGGCGGCCGGAGCCGAGAGGCTTGGCGTTAAGGTTGATTTGGTGAGTTGTAGATTCGATAGCTTTAACGGTGTGGTTGATGCTCTTCATTCCAGATGGCAGAGCTTAGAACAGAACCCTAACTGA

mRNA sequence

ATGGATCCCCTGTGGTGCCCCACCCTCACCGTCCAGCCCACTCCCCACGCCATCAAATCCCACATCCTTCCCCCAAATCTCGAATCCTTCTCCGCCGTCGCTTTCACTTCCCGCGCCGGAATTTCAGCTCTCCTCGACGCTGCAACTGAAATCGGCGAACCCTTGCTACCGTCGCAGGGCGAGACTTTTCTAATCGCTGCCCTAGGTAAGGATTCGGAGCTTCTCGACCATGGATTTATTTCCCAAATTTGCCCTAACGCGAGTAGAATTCAAGTCGTGCTCCCTAAAATAGCAACTCCGAGTGGTTTAGTGGAGGCTCTTGGAGTTGGAAACCGCCGGCGGGTTCTGTGTCCGGTTCCTCGCGTCGTGGGGCTGGAGGAGCCTCCGGTAGTTCCGAACTTCCTCCACGACCTGGAGGCGAACGGATGGGTTCCGGTTCGGGTCGATGCGTACGAGACCCGATGGGCCGGACCCGGGTGCGCGAGGCAGCTCGTGGAGAGAGATGAGAAATTGGATGCCATTGTGTTCACAAGTACTGGGGAAGTGGAGGGCCTGCTGAAAAGCTTGAGGGATTTAGGGTTCGAGTGGGAGACGATGAGAAAGAGGTGGCCGGAAATGGTGGTGGCCGCGCACGGGCCGGTGACGGCGGCCGGAGCCGAGAGGCTTGGCGTTAAGGTTGATTTGGTGAGTTGTAGATTCGATAGCTTTAACGGTGTGGTTGATGCTCTTCATTCCAGATGGCAGAGCTTAGAACAGAACCCTAACTGA

Coding sequence (CDS)

ATGGATCCCCTGTGGTGCCCCACCCTCACCGTCCAGCCCACTCCCCACGCCATCAAATCCCACATCCTTCCCCCAAATCTCGAATCCTTCTCCGCCGTCGCTTTCACTTCCCGCGCCGGAATTTCAGCTCTCCTCGACGCTGCAACTGAAATCGGCGAACCCTTGCTACCGTCGCAGGGCGAGACTTTTCTAATCGCTGCCCTAGGTAAGGATTCGGAGCTTCTCGACCATGGATTTATTTCCCAAATTTGCCCTAACGCGAGTAGAATTCAAGTCGTGCTCCCTAAAATAGCAACTCCGAGTGGTTTAGTGGAGGCTCTTGGAGTTGGAAACCGCCGGCGGGTTCTGTGTCCGGTTCCTCGCGTCGTGGGGCTGGAGGAGCCTCCGGTAGTTCCGAACTTCCTCCACGACCTGGAGGCGAACGGATGGGTTCCGGTTCGGGTCGATGCGTACGAGACCCGATGGGCCGGACCCGGGTGCGCGAGGCAGCTCGTGGAGAGAGATGAGAAATTGGATGCCATTGTGTTCACAAGTACTGGGGAAGTGGAGGGCCTGCTGAAAAGCTTGAGGGATTTAGGGTTCGAGTGGGAGACGATGAGAAAGAGGTGGCCGGAAATGGTGGTGGCCGCGCACGGGCCGGTGACGGCGGCCGGAGCCGAGAGGCTTGGCGTTAAGGTTGATTTGGTGAGTTGTAGATTCGATAGCTTTAACGGTGTGGTTGATGCTCTTCATTCCAGATGGCAGAGCTTAGAACAGAACCCTAACTGA

Protein sequence

MDPLWCPTLTVQPTPHAIKSHILPPNLESFSAVAFTSRAGISALLDAATEIGEPLLPSQGETFLIAALGKDSELLDHGFISQICPNASRIQVVLPKIATPSGLVEALGVGNRRRVLCPVPRVVGLEEPPVVPNFLHDLEANGWVPVRVDAYETRWAGPGCARQLVERDEKLDAIVFTSTGEVEGLLKSLRDLGFEWETMRKRWPEMVVAAHGPVTAAGAERLGVKVDLVSCRFDSFNGVVDALHSRWQSLEQNPN

Homology

[Close]

BLAST of Moc06g06140.1 vs. NCBI nr
Match: XP_022134809.1 (uncharacterized protein LOC111006990 [Momordica charantia])

HSP 1 Score: 525.8 bits (1353), Expect = 2.1e-145
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MDPLWCPTLTVQPTPHAIKSHILPPNLESFSAVAFTSRAGISALLDAATEIGEPLLPSQG 60
           MDPLWCPTLTVQPTPHAIKSHILPPNLESFSAVAFTSRAGISALLDAATEIGEPLLPSQG
Sbjct: 54  MDPLWCPTLTVQPTPHAIKSHILPPNLESFSAVAFTSRAGISALLDAATEIGEPLLPSQG 113

Query: 61  ETFLIAALGKDSELLDHGFISQICPNASRIQVVLPKIATPSGLVEALGVGNRRRVLCPVP 120
           ETFLIAALGKDSELLDHGFISQICPNASRIQVVLPKIATPSGLVEALGVGNRRRVLCPVP
Sbjct: 114 ETFLIAALGKDSELLDHGFISQICPNASRIQVVLPKIATPSGLVEALGVGNRRRVLCPVP 173

Query: 121 RVVGLEEPPVVPNFLHDLEANGWVPVRVDAYETRWAGPGCARQLVERDEKLDAIVFTSTG 180
           RVVGLEEPPVVPNFLHDLEANGWVPVRVDAYETRWAGPGCARQLVERDEKLDAIVFTSTG
Sbjct: 174 RVVGLEEPPVVPNFLHDLEANGWVPVRVDAYETRWAGPGCARQLVERDEKLDAIVFTSTG 233

Query: 181 EVEGLLKSLRDLGFEWETMRKRWPEMVVAAHGPVTAAGAERLGVKVDLVSCRFDSFNGVV 240
           EVEGLLKSLRDLGFEWETMRKRWPEMVVAAHGPVTAAGAERLGVKVDLVSCRFDSFNGVV
Sbjct: 234 EVEGLLKSLRDLGFEWETMRKRWPEMVVAAHGPVTAAGAERLGVKVDLVSCRFDSFNGVV 293

Query: 241 DALHSRWQSLEQNPN 256
           DALHSRWQSLEQNPN
Sbjct: 294 DALHSRWQSLEQNPN 308

[Close]

BLAST of Moc06g06140.1 vs. NCBI nr
Match: XP_038878808.1 (uncharacterized protein LOC120070948 [Benincasa hispida] >XP_038878809.1 uncharacterized protein LOC120070948 [Benincasa hispida] >XP_038878810.1 uncharacterized protein LOC120070948 [Benincasa hispida])

HSP 1 Score: 446.8 bits (1148), Expect = 1.2e-121
Identity = 216/255 (84.71%), Postives = 235/255 (92.16%), Query Frame = 0


Query: 2   DPLWCPTLTVQPTPHAIKSHILPPNLESFSAVAFTSRAGISALLDAATEIGEPLLPSQGE 61
           +PLWCPTLTV PTP AIKSH+LPP L SFSAVAFTSR+GI+ALLDAATEIGEPLLPS+G+
Sbjct: 56  EPLWCPTLTVHPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSRGD 115

Query: 62  TFLIAALGKDSELLDHGFISQICPNASRIQVVLPKIATPSGLVEALGVGNRRRVLCPVPR 121
           TFLIAALGKDSELLDHGF+S+ CPN SRI+VV+P+IATP+GLVEALG+GN+RRVLCPVPR
Sbjct: 116 TFLIAALGKDSELLDHGFLSRFCPNTSRIRVVVPEIATPTGLVEALGIGNQRRVLCPVPR 175

Query: 122 VVGLEEPPVVPNFLHDLEANGWVPVRVDAYETRWAGPGCARQLVER--DEKLDAIVFTST 181
           VVGL EPPVVPNFL DLE  GWVPVRV AYETRWAGP CAR+LVER  DEKLDAIVFTST
Sbjct: 176 VVGLNEPPVVPNFLRDLETKGWVPVRVAAYETRWAGPDCARKLVERGKDEKLDAIVFTST 235

Query: 182 GEVEGLLKSLRDLGFEWETMRKRWPEMVVAAHGPVTAAGAERLGVKVDLVSCRFDSFNGV 241
           GEVEGLLKSL  LG +WE MRKRWPEMVVAA+GPVTAAGAERLG+KVDLVS +FDSFNGV
Sbjct: 236 GEVEGLLKSLGHLGLKWEVMRKRWPEMVVAANGPVTAAGAERLGIKVDLVSSKFDSFNGV 295

Query: 242 VDALHSRWQSLEQNP 255
           VDALH RWQSLEQNP
Sbjct: 296 VDALHWRWQSLEQNP 310

[Close]

BLAST of Moc06g06140.1 vs. NCBI nr
Match: XP_023003818.1 (uncharacterized protein LOC111497286 [Cucurbita maxima])

HSP 1 Score: 445.3 bits (1144), Expect = 3.6e-121
Identity = 214/255 (83.92%), Postives = 233/255 (91.37%), Query Frame = 0


Query: 2   DPLWCPTLTVQPTPHAIKSHILPPNLESFSAVAFTSRAGISALLDAATEIGEPLLPSQGE 61
           DPLWCPT+TV PTP AIKSH+LPPNL  +SAVAFTSR+GI+ALLDAATEI +PLL  QG+
Sbjct: 55  DPLWCPTVTVHPTPLAIKSHLLPPNLHFYSAVAFTSRSGITALLDAATEIDDPLLSPQGD 114

Query: 62  TFLIAALGKDSELLDHGFISQICPNASRIQVVLPKIATPSGLVEALGVGNRRRVLCPVPR 121
           TFLIAALGKDSELLDHG +S+ CPN SRI+VV+PKIATPSGLVEALG+GN RRVLCPVPR
Sbjct: 115 TFLIAALGKDSELLDHGVLSKFCPNTSRIRVVVPKIATPSGLVEALGIGNHRRVLCPVPR 174

Query: 122 VVGLEEPPVVPNFLHDLEANGWVPVRVDAYETRWAGPGCARQLVER--DEKLDAIVFTST 181
           VVGL EPPVVPNFL DL A+GWVPVRVDAYETRWAGP CAR LV+R  DEKLDAIVFTST
Sbjct: 175 VVGLNEPPVVPNFLRDLAASGWVPVRVDAYETRWAGPECARMLVKRGEDEKLDAIVFTST 234

Query: 182 GEVEGLLKSLRDLGFEWETMRKRWPEMVVAAHGPVTAAGAERLGVKVDLVSCRFDSFNGV 241
           GEVEGLLKSLR LG +WE MRK+WPEMV+AAHGPVTAAGAERLGVK+DLVS +FDSFNGV
Sbjct: 235 GEVEGLLKSLRTLGLKWEMMRKKWPEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGV 294

Query: 242 VDALHSRWQSLEQNP 255
           VDALHSRWQSLEQNP
Sbjct: 295 VDALHSRWQSLEQNP 309

[Close]

BLAST of Moc06g06140.1 vs. NCBI nr
Match: KAG6587847.1 (hypothetical protein SDJN03_16412, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035661.1 hypothetical protein SDJN02_02459, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 444.9 bits (1143), Expect = 4.7e-121
Identity = 214/255 (83.92%), Postives = 233/255 (91.37%), Query Frame = 0


Query: 2   DPLWCPTLTVQPTPHAIKSHILPPNLESFSAVAFTSRAGISALLDAATEIGEPLLPSQGE 61
           DPLWCPT+TV PTP AIKSH+LPPNL  +SAVAFTSR+GI+ALLDAATEI EPLL  QG+
Sbjct: 56  DPLWCPTVTVHPTPLAIKSHLLPPNLHFYSAVAFTSRSGITALLDAATEIDEPLLSPQGD 115

Query: 62  TFLIAALGKDSELLDHGFISQICPNASRIQVVLPKIATPSGLVEALGVGNRRRVLCPVPR 121
           TFLIAALGKDSELLDHG +S+ CPNASRI+VV+PKIA+PSGLVEALG+GN RRVLCPVPR
Sbjct: 116 TFLIAALGKDSELLDHGVLSKFCPNASRIRVVVPKIASPSGLVEALGIGNHRRVLCPVPR 175

Query: 122 VVGLEEPPVVPNFLHDLEANGWVPVRVDAYETRWAGPGCARQLVER--DEKLDAIVFTST 181
           VVGL EPPVVPNFL DL A+GWVPVRVDAYETRW GP CAR+L ER  DEKLDAIVFTST
Sbjct: 176 VVGLNEPPVVPNFLRDLAASGWVPVRVDAYETRWVGPECARKLAERGEDEKLDAIVFTST 235

Query: 182 GEVEGLLKSLRDLGFEWETMRKRWPEMVVAAHGPVTAAGAERLGVKVDLVSCRFDSFNGV 241
           GEVEGLLKSLR LG +WE MRK+WPEMV+AAHGPVTAAGAERLGVK+DLVS +FDSFNGV
Sbjct: 236 GEVEGLLKSLRALGLKWEMMRKKWPEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGV 295

Query: 242 VDALHSRWQSLEQNP 255
           VDALHSRWQSLEQNP
Sbjct: 296 VDALHSRWQSLEQNP 310

[Close]

BLAST of Moc06g06140.1 vs. NCBI nr
Match: XP_022926996.1 (uncharacterized protein LOC111433956 [Cucurbita moschata])

HSP 1 Score: 444.1 bits (1141), Expect = 8.0e-121
Identity = 214/255 (83.92%), Postives = 232/255 (90.98%), Query Frame = 0


Query: 2   DPLWCPTLTVQPTPHAIKSHILPPNLESFSAVAFTSRAGISALLDAATEIGEPLLPSQGE 61
           DPLWCPT+TV PTP AIKSH+LPPNL  +SAVAFTSR+GI+ALLDAATEI EPLL  QG+
Sbjct: 56  DPLWCPTVTVHPTPLAIKSHLLPPNLHFYSAVAFTSRSGITALLDAATEIDEPLLSPQGD 115

Query: 62  TFLIAALGKDSELLDHGFISQICPNASRIQVVLPKIATPSGLVEALGVGNRRRVLCPVPR 121
           TFLIAALGKDSELLDHG  S+ CPNASRI+VV+PKIA+PSGLVEALG+GN RRVLCPVPR
Sbjct: 116 TFLIAALGKDSELLDHGVFSKFCPNASRIRVVVPKIASPSGLVEALGIGNHRRVLCPVPR 175

Query: 122 VVGLEEPPVVPNFLHDLEANGWVPVRVDAYETRWAGPGCARQLVER--DEKLDAIVFTST 181
           VVGL EPPVVPNFL DL A+GWVPVRVDAYETRW GP CAR+L ER  DEKLDAIVFTST
Sbjct: 176 VVGLNEPPVVPNFLRDLAASGWVPVRVDAYETRWVGPECARKLAERGEDEKLDAIVFTST 235

Query: 182 GEVEGLLKSLRDLGFEWETMRKRWPEMVVAAHGPVTAAGAERLGVKVDLVSCRFDSFNGV 241
           GEVEGLLKSLR LG +WE MRK+WPEMV+AAHGPVTAAGAERLGVK+DLVS +FDSFNGV
Sbjct: 236 GEVEGLLKSLRALGLKWEMMRKKWPEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGV 295

Query: 242 VDALHSRWQSLEQNP 255
           VDALHSRWQSLEQNP
Sbjct: 296 VDALHSRWQSLEQNP 310

[Close]

BLAST of Moc06g06140.1 vs. ExPASy TrEMBL
Match: A0A6J1BZU3 (Hydroxymethylbilane hydrolyase [cyclizing] OS=Momordica charantia OX=3673 GN=LOC111006990 PE=3 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.0e-145
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MDPLWCPTLTVQPTPHAIKSHILPPNLESFSAVAFTSRAGISALLDAATEIGEPLLPSQG 60
           MDPLWCPTLTVQPTPHAIKSHILPPNLESFSAVAFTSRAGISALLDAATEIGEPLLPSQG
Sbjct: 54  MDPLWCPTLTVQPTPHAIKSHILPPNLESFSAVAFTSRAGISALLDAATEIGEPLLPSQG 113

Query: 61  ETFLIAALGKDSELLDHGFISQICPNASRIQVVLPKIATPSGLVEALGVGNRRRVLCPVP 120
           ETFLIAALGKDSELLDHGFISQICPNASRIQVVLPKIATPSGLVEALGVGNRRRVLCPVP
Sbjct: 114 ETFLIAALGKDSELLDHGFISQICPNASRIQVVLPKIATPSGLVEALGVGNRRRVLCPVP 173

Query: 121 RVVGLEEPPVVPNFLHDLEANGWVPVRVDAYETRWAGPGCARQLVERDEKLDAIVFTSTG 180
           RVVGLEEPPVVPNFLHDLEANGWVPVRVDAYETRWAGPGCARQLVERDEKLDAIVFTSTG
Sbjct: 174 RVVGLEEPPVVPNFLHDLEANGWVPVRVDAYETRWAGPGCARQLVERDEKLDAIVFTSTG 233

Query: 181 EVEGLLKSLRDLGFEWETMRKRWPEMVVAAHGPVTAAGAERLGVKVDLVSCRFDSFNGVV 240
           EVEGLLKSLRDLGFEWETMRKRWPEMVVAAHGPVTAAGAERLGVKVDLVSCRFDSFNGVV
Sbjct: 234 EVEGLLKSLRDLGFEWETMRKRWPEMVVAAHGPVTAAGAERLGVKVDLVSCRFDSFNGVV 293

Query: 241 DALHSRWQSLEQNPN 256
           DALHSRWQSLEQNPN
Sbjct: 294 DALHSRWQSLEQNPN 308

[Close]

BLAST of Moc06g06140.1 vs. ExPASy TrEMBL
Match: A0A6J1KXQ2 (Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucurbita maxima OX=3661 GN=LOC111497286 PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.7e-121
Identity = 214/255 (83.92%), Postives = 233/255 (91.37%), Query Frame = 0


Query: 2   DPLWCPTLTVQPTPHAIKSHILPPNLESFSAVAFTSRAGISALLDAATEIGEPLLPSQGE 61
           DPLWCPT+TV PTP AIKSH+LPPNL  +SAVAFTSR+GI+ALLDAATEI +PLL  QG+
Sbjct: 55  DPLWCPTVTVHPTPLAIKSHLLPPNLHFYSAVAFTSRSGITALLDAATEIDDPLLSPQGD 114

Query: 62  TFLIAALGKDSELLDHGFISQICPNASRIQVVLPKIATPSGLVEALGVGNRRRVLCPVPR 121
           TFLIAALGKDSELLDHG +S+ CPN SRI+VV+PKIATPSGLVEALG+GN RRVLCPVPR
Sbjct: 115 TFLIAALGKDSELLDHGVLSKFCPNTSRIRVVVPKIATPSGLVEALGIGNHRRVLCPVPR 174

Query: 122 VVGLEEPPVVPNFLHDLEANGWVPVRVDAYETRWAGPGCARQLVER--DEKLDAIVFTST 181
           VVGL EPPVVPNFL DL A+GWVPVRVDAYETRWAGP CAR LV+R  DEKLDAIVFTST
Sbjct: 175 VVGLNEPPVVPNFLRDLAASGWVPVRVDAYETRWAGPECARMLVKRGEDEKLDAIVFTST 234

Query: 182 GEVEGLLKSLRDLGFEWETMRKRWPEMVVAAHGPVTAAGAERLGVKVDLVSCRFDSFNGV 241
           GEVEGLLKSLR LG +WE MRK+WPEMV+AAHGPVTAAGAERLGVK+DLVS +FDSFNGV
Sbjct: 235 GEVEGLLKSLRTLGLKWEMMRKKWPEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGV 294

Query: 242 VDALHSRWQSLEQNP 255
           VDALHSRWQSLEQNP
Sbjct: 295 VDALHSRWQSLEQNP 309

[Close]

BLAST of Moc06g06140.1 vs. ExPASy TrEMBL
Match: A0A6J1EGG3 (Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucurbita moschata OX=3662 GN=LOC111433956 PE=3 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.9e-121
Identity = 214/255 (83.92%), Postives = 232/255 (90.98%), Query Frame = 0


Query: 2   DPLWCPTLTVQPTPHAIKSHILPPNLESFSAVAFTSRAGISALLDAATEIGEPLLPSQGE 61
           DPLWCPT+TV PTP AIKSH+LPPNL  +SAVAFTSR+GI+ALLDAATEI EPLL  QG+
Sbjct: 56  DPLWCPTVTVHPTPLAIKSHLLPPNLHFYSAVAFTSRSGITALLDAATEIDEPLLSPQGD 115

Query: 62  TFLIAALGKDSELLDHGFISQICPNASRIQVVLPKIATPSGLVEALGVGNRRRVLCPVPR 121
           TFLIAALGKDSELLDHG  S+ CPNASRI+VV+PKIA+PSGLVEALG+GN RRVLCPVPR
Sbjct: 116 TFLIAALGKDSELLDHGVFSKFCPNASRIRVVVPKIASPSGLVEALGIGNHRRVLCPVPR 175

Query: 122 VVGLEEPPVVPNFLHDLEANGWVPVRVDAYETRWAGPGCARQLVER--DEKLDAIVFTST 181
           VVGL EPPVVPNFL DL A+GWVPVRVDAYETRW GP CAR+L ER  DEKLDAIVFTST
Sbjct: 176 VVGLNEPPVVPNFLRDLAASGWVPVRVDAYETRWVGPECARKLAERGEDEKLDAIVFTST 235

Query: 182 GEVEGLLKSLRDLGFEWETMRKRWPEMVVAAHGPVTAAGAERLGVKVDLVSCRFDSFNGV 241
           GEVEGLLKSLR LG +WE MRK+WPEMV+AAHGPVTAAGAERLGVK+DLVS +FDSFNGV
Sbjct: 236 GEVEGLLKSLRALGLKWEMMRKKWPEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGV 295

Query: 242 VDALHSRWQSLEQNP 255
           VDALHSRWQSLEQNP
Sbjct: 296 VDALHSRWQSLEQNP 310

[Close]

BLAST of Moc06g06140.1 vs. ExPASy TrEMBL
Match: A0A5D3BX13 (Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00630 PE=3 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.5e-120
Identity = 215/252 (85.32%), Postives = 232/252 (92.06%), Query Frame = 0


Query: 2   DPLWCPTLTVQPTPHAIKSHILPPNLESFSAVAFTSRAGISALLDAATEIGEPLLPSQGE 61
           +PLWCPTLTVQPTP AIKSH+LPP L SFSAVAFTSR+GI+ALLDAATEIGEPLLPS G+
Sbjct: 56  EPLWCPTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGD 115

Query: 62  TFLIAALGKDSELLDHGFISQICPNASRIQVVLPKIATPSGLVEALGVGNRRRVLCPVPR 121
           TFLIAALGKDSELLDH F++ ICPN SRI+VV+P+IATP+GLVEALGVGN RRVLCPVPR
Sbjct: 116 TFLIAALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPR 175

Query: 122 VVGLEEPPVVPNFLHDLEANGWVPVRVDAYETRWAGPGCARQLVER--DEKLDAIVFTST 181
           VVGL EPPVVPNFL DLEA GWVPVRVDAYETRWAGP CAR+LVER  DEKLDAIVFTST
Sbjct: 176 VVGLNEPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTST 235

Query: 182 GEVEGLLKSLRDLGFEWETMRKRWPEMVVAAHGPVTAAGAERLGVKVDLVSCRFDSFNGV 241
           GEVEGLLKSL  LG EW+ M+KRWPEMVVAAHGPVTAAGAERLGVKVDLVS +FDSFNGV
Sbjct: 236 GEVEGLLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGV 295

Query: 242 VDALHSRWQSLE 252
           VD+LH RWQSL+
Sbjct: 296 VDSLHWRWQSLD 307

[Close]

BLAST of Moc06g06140.1 vs. ExPASy TrEMBL
Match: A0A5A7U8V3 (Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00050 PE=3 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.5e-120
Identity = 215/252 (85.32%), Postives = 232/252 (92.06%), Query Frame = 0


Query: 2   DPLWCPTLTVQPTPHAIKSHILPPNLESFSAVAFTSRAGISALLDAATEIGEPLLPSQGE 61
           +PLWCPTLTVQPTP AIKSH+LPP L SFSAVAFTSR+GI+ALLDAATEIGEPLLPS G+
Sbjct: 56  EPLWCPTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGD 115

Query: 62  TFLIAALGKDSELLDHGFISQICPNASRIQVVLPKIATPSGLVEALGVGNRRRVLCPVPR 121
           TFLIAALGKDSELLDH F++ ICPN SRI+VV+P+IATP+GLVEALGVGN RRVLCPVPR
Sbjct: 116 TFLIAALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPR 175

Query: 122 VVGLEEPPVVPNFLHDLEANGWVPVRVDAYETRWAGPGCARQLVER--DEKLDAIVFTST 181
           VVGL EPPVVPNFL DLEA GWVPVRVDAYETRWAGP CAR+LVER  DEKLDAIVFTST
Sbjct: 176 VVGLNEPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTST 235

Query: 182 GEVEGLLKSLRDLGFEWETMRKRWPEMVVAAHGPVTAAGAERLGVKVDLVSCRFDSFNGV 241
           GEVEGLLKSL  LG EW+ M+KRWPEMVVAAHGPVTAAGAERLGVKVDLVS +FDSFNGV
Sbjct: 236 GEVEGLLKSLEHLGLEWDMMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGV 295

Query: 242 VDALHSRWQSLE 252
           VD+LH RWQSL+
Sbjct: 296 VDSLHWRWQSLD 307

The following BLAST results are available for this feature:

BLAST of Moc06g06140.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134809.1	2.1e-145	100.00	uncharacterized protein LOC111006990 [Momordica charantia]	[more]
XP_038878808.1	1.2e-121	84.71	uncharacterized protein LOC120070948 [Benincasa hispida] >XP_038878809.1 unchara...	[more]
XP_023003818.1	3.6e-121	83.92	uncharacterized protein LOC111497286 [Cucurbita maxima]	[more]
KAG6587847.1	4.7e-121	83.92	hypothetical protein SDJN03_16412, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022926996.1	8.0e-121	83.92	uncharacterized protein LOC111433956 [Cucurbita moschata]	[more]

BLAST of Moc06g06140.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g06140.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZU3	1.0e-145	100.00	Hydroxymethylbilane hydrolyase [cyclizing] OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1KXQ2	1.7e-121	83.92	Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1EGG3	3.9e-121	83.92	Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A5D3BX13	1.5e-120	85.32	Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5A7U8V3	1.5e-120	85.32	Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Moc06g06140.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003754	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase	PFAM	PF02602	HEM4	coord: 2..236 e-value: 3.7E-22 score: 78.8
IPR003754	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase	CDD	cd06578	HemD	coord: 2..243 e-value: 6.76833E-23 score: 91.5999
IPR036108	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily	GENE3D	3.40.50.10090		coord: 132..249 e-value: 2.0E-13 score: 52.2
IPR036108	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily	SUPERFAMILY	69618	HemD-like	coord: 2..246
None	No IPR available	PANTHER	PTHR38020	UROPORPHYRINOGEN-III SYNTHASE	coord: 2..249

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc06g06140	Moc06g06140	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc06g06140.1.exon1	Moc06g06140.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc06g06140.1	cds.Moc06g06140.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc06g06140.1	Moc06g06140.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033014	tetrapyrrole biosynthetic process
biological_process	GO:0006782	protoporphyrinogen IX biosynthetic process
molecular_function	GO:0004852	uroporphyrinogen-III synthase activity