Moc06g04340.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g04340.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Extracellular ribonuclease
Location	chr6: 3115520 .. 3116771 (+)
Sequence length	672
RNA-Seq Expression	Moc06g04340.1
Synteny	Moc06g04340.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATCTATGGCGATCGACAGCTTCTCTCCGACGAAATCGGTGGCCGGAATTGAGGCTCAGAGACCATGTAACCAGGAGTCGTCTTCCACACCTAGCCGCTTACAATTGAAACCGAAATCGAAATTTCCATCGGTTTCAGAGACCAAATCTACGAATCTTCGCATTGATTTTCATCATAAGCTACTCAACAAGCTTAATGTGCTCCCGTTTATGCGAGTTTGCTGCTCTGTTTCTGCCCTATTTGACTGGTTAGAGCCATTATACCCATTCTCTCTCTCTCTCTCTCTCTCTCCCTCCATTTTTATTTATTCTCCATCAAATGTTTGATTGATTCTGAACTTCTGAGCTTCGTGTATAGAAAAGGATTCAACAAGTCCTCTGCGAATCGGAATTGTGAATGTGTTTTTGAGATTTTCCTCTTGGGTATAGGATGTTAATTCTTTTTATGACTAGCTTACGTAGAAGCATTGTTTGTATTATTGTTTCCGTGACTGATAATAGTTTTCTCTGCAGGGATTCGTGGAGTTGTATGTTGTTGAATTTCTTTGGTATTTCTTGGAGATGGGCGACTCAAATTACCTCCTATTACTTGTTCTTGCTTTGTTTAGCCGTGCAAGCCCACGATTATCCATCTCCTTCTGTTAGATATCCTTGTGAAGACGTTAACAAGTACTATTCTCATGTACCACAGTTGACAGGAAAACCTCTCAAACTTAAGCTGAATTCCATGATTGCAGCACATCATTCCTTGTCCTACAATGAGGTGCCTTTATTTTTCATAACGAACTTTTAGTTTTAGCTATAGCTTGACTGCTCCCTCTTCTAGCTTGTATAATAAGTTACTTAGGCATGTAATGCTCAGCTAAGAGGATTTGATGAACAGGTCTGGGAAGCTATCAAGATTCTTGATGCTGCTGATGTGGACAAACCAGAAGTCTCATCAGCAATGTAACGCTCATTACAGCTGAAACCACTTCAGTTTTTGTTTTATTTGTAATTTCCATTCATACAAATCTAATTATTTCATGAAAATGTAACTTTTCCCATTTTGGTGAAGTGGCCATTTTAGAGCAATTGCACCTTAATAATTCTACAGCGTTTTTTAAATTCTACCTGAATATTTGTTGTCAACTTTTACCGCAGAGTGGAGATCTACTCGCAAAGGATTGTGTCAAAGTCTCTAGCAGGGAAAAGCAAGGGTTGGAACAGTAAGTTCTTTAGTGAACTAATTATGGCAATTACAATGTAA

mRNA sequence

ATGTTATCTATGGCGATCGACAGCTTCTCTCCGACGAAATCGGTGGCCGGAATTGAGGCTCAGAGACCATGTAACCAGGAGTCGTCTTCCACACCTAGCCGCTTACAATTGAAACCGAAATCGAAATTTCCATCGGTTTCAGAGACCAAATCTACGAATCTTCGCATTGATTTTCATCATAAGCTACTCAACAAGCTTAATGTGCTCCCGTTTATGCGAGTTTGCTGCTCTGTTTCTGCCCTATTTGACTGGGATTCGTGGAGTTGTATGTTGTTGAATTTCTTTGGTATTTCTTGGAGATGGGCGACTCAAATTACCTCCTATTACTTGTTCTTGCTTTGTTTAGCCGTGCAAGCCCACGATTATCCATCTCCTTCTGTTAGATATCCTTGTGAAGACGTTAACAAGTACTATTCTCATGTACCACAGTTGACAGGAAAACCTCTCAAACTTAAGCTGAATTCCATGATTGCAGCACATCATTCCTTGTCCTACAATGAGGTCTGGGAAGCTATCAAGATTCTTGATGCTGCTGATGTGGACAAACCAGAAGTCTCATCAGCAATAGTGGAGATCTACTCGCAAAGGATTGTGTCAAAGTCTCTAGCAGGGAAAAGCAAGGGTTGGAACAGTAAGTTCTTTAGTGAACTAATTATGGCAATTACAATGTAA

Coding sequence (CDS)

ATGTTATCTATGGCGATCGACAGCTTCTCTCCGACGAAATCGGTGGCCGGAATTGAGGCTCAGAGACCATGTAACCAGGAGTCGTCTTCCACACCTAGCCGCTTACAATTGAAACCGAAATCGAAATTTCCATCGGTTTCAGAGACCAAATCTACGAATCTTCGCATTGATTTTCATCATAAGCTACTCAACAAGCTTAATGTGCTCCCGTTTATGCGAGTTTGCTGCTCTGTTTCTGCCCTATTTGACTGGGATTCGTGGAGTTGTATGTTGTTGAATTTCTTTGGTATTTCTTGGAGATGGGCGACTCAAATTACCTCCTATTACTTGTTCTTGCTTTGTTTAGCCGTGCAAGCCCACGATTATCCATCTCCTTCTGTTAGATATCCTTGTGAAGACGTTAACAAGTACTATTCTCATGTACCACAGTTGACAGGAAAACCTCTCAAACTTAAGCTGAATTCCATGATTGCAGCACATCATTCCTTGTCCTACAATGAGGTCTGGGAAGCTATCAAGATTCTTGATGCTGCTGATGTGGACAAACCAGAAGTCTCATCAGCAATAGTGGAGATCTACTCGCAAAGGATTGTGTCAAAGTCTCTAGCAGGGAAAAGCAAGGGTTGGAACAGTAAGTTCTTTAGTGAACTAATTATGGCAATTACAATGTAA

Protein sequence

MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSKSLAGKSKGWNSKFFSELIMAITM

Homology

[Close]

BLAST of Moc06g04340.1 vs. NCBI nr
Match: XP_022134931.1 (uncharacterized protein LOC111007064 isoform X2 [Momordica charantia])

HSP 1 Score: 425.2 bits (1092), Expect = 3.4e-115
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHH 60
           MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHH
Sbjct: 1   MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHH 60

Query: 61  KLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQAH 120
           KLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQAH
Sbjct: 61  KLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQAH 120

Query: 121 DYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADV 180
           DYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADV
Sbjct: 121 DYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADV 180

Query: 181 DKPEVSSAIVEIYSQRIVSKSLAGKSKGWN 211
           DKPEVSSAIVEIYSQRIVSKSLAGKSKGWN
Sbjct: 181 DKPEVSSAIVEIYSQRIVSKSLAGKSKGWN 210

[Close]

BLAST of Moc06g04340.1 vs. NCBI nr
Match: XP_022134930.1 (uncharacterized protein LOC111007064 isoform X1 [Momordica charantia])

HSP 1 Score: 425.2 bits (1092), Expect = 3.4e-115
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHH 60
           MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHH
Sbjct: 1   MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHH 60

Query: 61  KLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQAH 120
           KLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQAH
Sbjct: 61  KLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQAH 120

Query: 121 DYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADV 180
           DYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADV
Sbjct: 121 DYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADV 180

Query: 181 DKPEVSSAIVEIYSQRIVSKSLAGKSKGWN 211
           DKPEVSSAIVEIYSQRIVSKSLAGKSKGWN
Sbjct: 181 DKPEVSSAIVEIYSQRIVSKSLAGKSKGWN 210

[Close]

BLAST of Moc06g04340.1 vs. NCBI nr
Match: XP_022931412.1 (uncharacterized protein LOC111437594 isoform X2 [Cucurbita moschata])

HSP 1 Score: 316.2 bits (809), Expect = 2.2e-82
Identity = 163/212 (76.89%), Postives = 175/212 (82.55%), Query Frame = 0


Query: 3   SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDF 62
           +M IDS S  K V+GIE QRPCN ESSSTPSR QLK     KSKFPSV +TKST LRI+F
Sbjct: 4   AMTIDSLSLRKLVSGIETQRPCNLESSSTPSRFQLKSISISKSKFPSVPQTKSTKLRIEF 63

Query: 63  HHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQ 122
           H K  + LN LPFMRV CSVSALF WDSWS ML N   ISWRWATQITSYYLF L L  Q
Sbjct: 64  HSKPHHSLNKLPFMRVRCSVSALFHWDSWSSMLSNCLDISWRWATQITSYYLFFLSLVAQ 123

Query: 123 AHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAA 182
           AHDYPSPSVRYPCEDVN+YY++V QLTG+PLK KLNS+IAAHHSLSY EVW+AIKILDAA
Sbjct: 124 AHDYPSPSVRYPCEDVNEYYANVAQLTGEPLKRKLNSIIAAHHSLSYKEVWDAIKILDAA 183

Query: 183 DVDKPEVSSAIVEIYSQRIVSKSLAGKSKGWN 211
           DVDKPE SS IVEIYSQRIVSKSLAGK +GWN
Sbjct: 184 DVDKPEASSEIVEIYSQRIVSKSLAGKPEGWN 215

[Close]

BLAST of Moc06g04340.1 vs. NCBI nr
Match: XP_022931421.1 (uncharacterized protein LOC111437594 isoform X3 [Cucurbita moschata])

HSP 1 Score: 310.5 bits (794), Expect = 1.2e-80
Identity = 163/216 (75.46%), Postives = 175/216 (81.02%), Query Frame = 0


Query: 3   SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDF 62
           +M IDS S  K V+GIE QRPCN ESSSTPSR QLK     KSKFPSV +TKST LRI+F
Sbjct: 4   AMTIDSLSLRKLVSGIETQRPCNLESSSTPSRFQLKSISISKSKFPSVPQTKSTKLRIEF 63

Query: 63  HHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQ 122
           H K  + LN LPFMRV CSVSALF WDSWS ML N   ISWRWATQITSYYLF L L  Q
Sbjct: 64  HSKPHHSLNKLPFMRVRCSVSALFHWDSWSSMLSNCLDISWRWATQITSYYLFFLSLVAQ 123

Query: 123 AHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAA 182
           AHDYPSPSVRYPCEDVN+YY++V QLTG+PLK KLNS+IAAHHSLSY EVW+AIKILDAA
Sbjct: 124 AHDYPSPSVRYPCEDVNEYYANVAQLTGEPLKRKLNSIIAAHHSLSYKEVWDAIKILDAA 183

Query: 183 DVDKPEVSSAI----VEIYSQRIVSKSLAGKSKGWN 211
           DVDKPE SS I    VEIYSQRIVSKSLAGK +GWN
Sbjct: 184 DVDKPEASSEIFYHRVEIYSQRIVSKSLAGKPEGWN 219

[Close]

BLAST of Moc06g04340.1 vs. NCBI nr
Match: XP_022931403.1 (uncharacterized protein LOC111437594 isoform X1 [Cucurbita moschata])

HSP 1 Score: 310.5 bits (794), Expect = 1.2e-80
Identity = 163/216 (75.46%), Postives = 175/216 (81.02%), Query Frame = 0


Query: 3   SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDF 62
           +M IDS S  K V+GIE QRPCN ESSSTPSR QLK     KSKFPSV +TKST LRI+F
Sbjct: 4   AMTIDSLSLRKLVSGIETQRPCNLESSSTPSRFQLKSISISKSKFPSVPQTKSTKLRIEF 63

Query: 63  HHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQ 122
           H K  + LN LPFMRV CSVSALF WDSWS ML N   ISWRWATQITSYYLF L L  Q
Sbjct: 64  HSKPHHSLNKLPFMRVRCSVSALFHWDSWSSMLSNCLDISWRWATQITSYYLFFLSLVAQ 123

Query: 123 AHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAA 182
           AHDYPSPSVRYPCEDVN+YY++V QLTG+PLK KLNS+IAAHHSLSY EVW+AIKILDAA
Sbjct: 124 AHDYPSPSVRYPCEDVNEYYANVAQLTGEPLKRKLNSIIAAHHSLSYKEVWDAIKILDAA 183

Query: 183 DVDKPEVSSAI----VEIYSQRIVSKSLAGKSKGWN 211
           DVDKPE SS I    VEIYSQRIVSKSLAGK +GWN
Sbjct: 184 DVDKPEASSEIFYHRVEIYSQRIVSKSLAGKPEGWN 219

[Close]

BLAST of Moc06g04340.1 vs. ExPASy Swiss-Prot
Match: Q03091 (Extracellular ribonuclease OS=Bacillus amyloliquefaciens OX=1390 GN=bsn PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.9e-05
Identity = 30/88 (34.09%), Postives = 45/88 (51.14%), Query Frame = 0


Query: 124 SPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKP 183
           S +V  P  D   YY      +G  LK  L+ +I+ H  LSY++VW A+K  D    + P
Sbjct: 53  SSAVITPSADTETYYKEASGKSGTALKSALHRIISGHTKLSYSQVWNALKETD----EDP 112

Query: 184 EVSSAIVEIYSQRIVSKSLAGKSKG-WN 211
              + ++ +Y+Q   +KS  G S G WN
Sbjct: 113 ANPNNVILLYTQESRAKSKNGGSVGDWN 136

[Close]

BLAST of Moc06g04340.1 vs. ExPASy Swiss-Prot
Match: O32150 (Extracellular ribonuclease OS=Bacillus subtilis (strain 168) OX=224308 GN=bsn PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.9e-05
Identity = 29/82 (35.37%), Postives = 43/82 (52.44%), Query Frame = 0


Query: 130 PCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAI 189
           P  D + YY      TG  LK  L+ +I+ H  LSY+EVW A+K  D    + P   + +
Sbjct: 57  PYADTDTYYEGAEGKTGDSLKSTLHRIISGHTMLSYSEVWNALKETD----EDPRNPNNV 116

Query: 190 VEIYSQRIVSKSLAGKSKG-WN 211
           + +Y+    SK+L G + G WN
Sbjct: 117 ILLYTNESRSKNLNGGNVGDWN 134

[Close]

BLAST of Moc06g04340.1 vs. ExPASy TrEMBL
Match: A0A6J1BZ57 (uncharacterized protein LOC111007064 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007064 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.6e-115
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHH 60
           MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHH
Sbjct: 1   MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHH 60

Query: 61  KLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQAH 120
           KLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQAH
Sbjct: 61  KLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQAH 120

Query: 121 DYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADV 180
           DYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADV
Sbjct: 121 DYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADV 180

Query: 181 DKPEVSSAIVEIYSQRIVSKSLAGKSKGWN 211
           DKPEVSSAIVEIYSQRIVSKSLAGKSKGWN
Sbjct: 181 DKPEVSSAIVEIYSQRIVSKSLAGKSKGWN 210

[Close]

BLAST of Moc06g04340.1 vs. ExPASy TrEMBL
Match: A0A6J1BZP9 (uncharacterized protein LOC111007064 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007064 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.6e-115
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHH 60
           MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHH
Sbjct: 1   MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHH 60

Query: 61  KLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQAH 120
           KLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQAH
Sbjct: 61  KLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQAH 120

Query: 121 DYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADV 180
           DYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADV
Sbjct: 121 DYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADV 180

Query: 181 DKPEVSSAIVEIYSQRIVSKSLAGKSKGWN 211
           DKPEVSSAIVEIYSQRIVSKSLAGKSKGWN
Sbjct: 181 DKPEVSSAIVEIYSQRIVSKSLAGKSKGWN 210

[Close]

BLAST of Moc06g04340.1 vs. ExPASy TrEMBL
Match: A0A6J1ETJ3 (uncharacterized protein LOC111437594 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437594 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.1e-82
Identity = 163/212 (76.89%), Postives = 175/212 (82.55%), Query Frame = 0


Query: 3   SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDF 62
           +M IDS S  K V+GIE QRPCN ESSSTPSR QLK     KSKFPSV +TKST LRI+F
Sbjct: 4   AMTIDSLSLRKLVSGIETQRPCNLESSSTPSRFQLKSISISKSKFPSVPQTKSTKLRIEF 63

Query: 63  HHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQ 122
           H K  + LN LPFMRV CSVSALF WDSWS ML N   ISWRWATQITSYYLF L L  Q
Sbjct: 64  HSKPHHSLNKLPFMRVRCSVSALFHWDSWSSMLSNCLDISWRWATQITSYYLFFLSLVAQ 123

Query: 123 AHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAA 182
           AHDYPSPSVRYPCEDVN+YY++V QLTG+PLK KLNS+IAAHHSLSY EVW+AIKILDAA
Sbjct: 124 AHDYPSPSVRYPCEDVNEYYANVAQLTGEPLKRKLNSIIAAHHSLSYKEVWDAIKILDAA 183

Query: 183 DVDKPEVSSAIVEIYSQRIVSKSLAGKSKGWN 211
           DVDKPE SS IVEIYSQRIVSKSLAGK +GWN
Sbjct: 184 DVDKPEASSEIVEIYSQRIVSKSLAGKPEGWN 215

[Close]

BLAST of Moc06g04340.1 vs. ExPASy TrEMBL
Match: A0A6J1EYI9 (uncharacterized protein LOC111437594 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437594 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.9e-81
Identity = 163/216 (75.46%), Postives = 175/216 (81.02%), Query Frame = 0


Query: 3   SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDF 62
           +M IDS S  K V+GIE QRPCN ESSSTPSR QLK     KSKFPSV +TKST LRI+F
Sbjct: 4   AMTIDSLSLRKLVSGIETQRPCNLESSSTPSRFQLKSISISKSKFPSVPQTKSTKLRIEF 63

Query: 63  HHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQ 122
           H K  + LN LPFMRV CSVSALF WDSWS ML N   ISWRWATQITSYYLF L L  Q
Sbjct: 64  HSKPHHSLNKLPFMRVRCSVSALFHWDSWSSMLSNCLDISWRWATQITSYYLFFLSLVAQ 123

Query: 123 AHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAA 182
           AHDYPSPSVRYPCEDVN+YY++V QLTG+PLK KLNS+IAAHHSLSY EVW+AIKILDAA
Sbjct: 124 AHDYPSPSVRYPCEDVNEYYANVAQLTGEPLKRKLNSIIAAHHSLSYKEVWDAIKILDAA 183

Query: 183 DVDKPEVSSAI----VEIYSQRIVSKSLAGKSKGWN 211
           DVDKPE SS I    VEIYSQRIVSKSLAGK +GWN
Sbjct: 184 DVDKPEASSEIFYHRVEIYSQRIVSKSLAGKPEGWN 219

[Close]

BLAST of Moc06g04340.1 vs. ExPASy TrEMBL
Match: A0A6J1ETL7 (uncharacterized protein LOC111437594 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111437594 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.9e-81
Identity = 163/216 (75.46%), Postives = 175/216 (81.02%), Query Frame = 0


Query: 3   SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDF 62
           +M IDS S  K V+GIE QRPCN ESSSTPSR QLK     KSKFPSV +TKST LRI+F
Sbjct: 4   AMTIDSLSLRKLVSGIETQRPCNLESSSTPSRFQLKSISISKSKFPSVPQTKSTKLRIEF 63

Query: 63  HHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYLFLLCLAVQ 122
           H K  + LN LPFMRV CSVSALF WDSWS ML N   ISWRWATQITSYYLF L L  Q
Sbjct: 64  HSKPHHSLNKLPFMRVRCSVSALFHWDSWSSMLSNCLDISWRWATQITSYYLFFLSLVAQ 123

Query: 123 AHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAA 182
           AHDYPSPSVRYPCEDVN+YY++V QLTG+PLK KLNS+IAAHHSLSY EVW+AIKILDAA
Sbjct: 124 AHDYPSPSVRYPCEDVNEYYANVAQLTGEPLKRKLNSIIAAHHSLSYKEVWDAIKILDAA 183

Query: 183 DVDKPEVSSAI----VEIYSQRIVSKSLAGKSKGWN 211
           DVDKPE SS I    VEIYSQRIVSKSLAGK +GWN
Sbjct: 184 DVDKPEASSEIFYHRVEIYSQRIVSKSLAGKPEGWN 219

The following BLAST results are available for this feature:

BLAST of Moc06g04340.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134931.1	3.4e-115	100.00	uncharacterized protein LOC111007064 isoform X2 [Momordica charantia]	[more]
XP_022134930.1	3.4e-115	100.00	uncharacterized protein LOC111007064 isoform X1 [Momordica charantia]	[more]
XP_022931412.1	2.2e-82	76.89	uncharacterized protein LOC111437594 isoform X2 [Cucurbita moschata]	[more]
XP_022931421.1	1.2e-80	75.46	uncharacterized protein LOC111437594 isoform X3 [Cucurbita moschata]	[more]
XP_022931403.1	1.2e-80	75.46	uncharacterized protein LOC111437594 isoform X1 [Cucurbita moschata]	[more]

BLAST of Moc06g04340.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q03091	3.9e-05	34.09	Extracellular ribonuclease OS=Bacillus amyloliquefaciens OX=1390 GN=bsn PE=1 SV=...	[more]
O32150	3.9e-05	35.37	Extracellular ribonuclease OS=Bacillus subtilis (strain 168) OX=224308 GN=bsn PE...	[more]

BLAST of Moc06g04340.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZ57	1.6e-115	100.00	uncharacterized protein LOC111007064 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1BZP9	1.6e-115	100.00	uncharacterized protein LOC111007064 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1ETJ3	1.1e-82	76.89	uncharacterized protein LOC111437594 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EYI9	5.9e-81	75.46	uncharacterized protein LOC111437594 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1ETL7	5.9e-81	75.46	uncharacterized protein LOC111437594 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Moc06g04340.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..48
IPR007346	Endonuclease I	PANTHER	PTHR33607	ENDONUCLEASE-1	coord: 47..210

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc06g04340	Moc06g04340	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc06g04340.1.exon1	Moc06g04340.1.exon1	exon
Moc06g04340.1.exon2	Moc06g04340.1.exon2	exon
Moc06g04340.1.exon3	Moc06g04340.1.exon3	exon
Moc06g04340.1.exon4	Moc06g04340.1.exon4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc06g04340.1	cds.Moc06g04340.1	CDS
cds.Moc06g04340.1	cds.Moc06g04340.1_2	CDS
cds.Moc06g04340.1	cds.Moc06g04340.1_3	CDS
cds.Moc06g04340.1	cds.Moc06g04340.1_4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc06g04340.1	Moc06g04340.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
molecular_function	GO:0004518	nuclease activity