Moc02g02000.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g02000.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr2: 1506809 .. 1508089 (-)
Sequence length	1281
RNA-Seq Expression	Moc02g02000.1
Synteny	Moc02g02000.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCAGAGCAGCAGTGGTAGAGGGGCAAGGTCACGACGGCTTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTCCTACCACCTGCGCACCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGGACCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCAACAAGTGAGAACTTTGACGCACTCCAGAGAGAAATGGAGGCAATGGGCACACAAATGCGGTCCATGGAGGAAATGTATAACGAGATGATACTAGCTGCAGGCGCAGGGTCCCGATCTGAAAATCGGATGACGCGCATTGAGATACTCGAGCAAAGGGGTTCCCACCTCGGCCCAGTCGAGGAGGAACATCTCGAAGACAACGAGAGCGAGGGACACACTCGCCGGAGGGGAGACCTCCGTGAGCATCTCAACAAAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACACCGGAGCTCCAATCAGCAGGCTGAATCCTCTCACAACCCAGCAACTCCCGCAGGGGTGATCACAAGGGCGGAGTTCGACCAGCTGAGGGGCAAGCTCGACGCTCAGGTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTTCACTGAACGATGGCGACTTGGGAGAATTGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCCGAAGTTCAAAGCTCCTACCGTGAAGCCTTATGATGGGTCGAAGGATCCCAAGGATTATGTTGAGGTCTTTGAAGGCCTCATGGATTTCCAAGCAGCATCAGACGCAATCAAATGCCGCGCCTTTCAGATCGCGCTTACTGGCAGCGCGCAATTGTGGTATCGGAGACTGCCAGCCAGGTCGATCTCGACCTACTCTCAGCTGAGAAGGGAGTTCCTCGCCCAGTTCTCTTCTCGGCATTATGACAAAAAGACAGCGACCCATCTCGCCACCATCAGACAGAAGGAGGGTGAGACGCTGCGAGAATATGTCACCAGATTCCAGGAGGAGCAATTGAAGGTTGCACACTGCTCCGATGACTCGGCCATGTGCTATTTTCTCACCGATCTAACCGACGAAGCCCTCACGGTGAAACTTGGAGAGGAGGCCCTGGCCACCTTCGCCGAGGTGCTTCAGAAGGCGAAGAAAGTCATCGATGGACAGGAGCTCCTCCGAACCAAAACCGGCCGACCCTAA

mRNA sequence

ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCAGAGCAGCAGTGGTAGAGGGGCAAGGTCACGACGGCTTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTCCTACCACCTGCGCACCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGGACCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCAACAAGTGAGAACTTTGACGCACTCCAGAGAGAAATGGAGGCAATGGGCACACAAATGCGGTCCATGGAGGAAATGTATAACGAGATGATACTAGCTGCAGGCGCAGGGTCCCGATCTGAAAATCGGATGACGCGCATTGAGATACTCGAGCAAAGGGGTTCCCACCTCGGCCCAGTCGAGGAGGAACATCTCGAAGACAACGAGAGCGAGGGACACACTCGCCGGAGGGGAGACCTCCGTGAGCATCTCAACAAAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACACCGGAGCTCCAATCAGCAGGCTGAATCCTCTCACAACCCAGCAACTCCCGCAGGGGTGATCACAAGGGCGGAGTTCGACCAGCTGAGGGGCAAGCTCGACGCTCAGGTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTTCACTGAACGATGGCGACTTGGGAGAATTGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCCGAAGTTCAAAGCTCCTACCGTGAAGCCTTATGATGGGTCGAAGGATCCCAAGGATTATGTTGAGGTCTTTGAAGGCCTCATGGATTTCCAAGCAGCATCAGACGCAATCAAATGCCGCGCCTTTCAGATCGCGCTTACTGGCAGCGCGCAATTGTGGTATCGGAGACTGCCAGCCAGGTCGATCTCGACCTACTCTCAGCTGAGAAGGGAGTTCCTCGCCCAGTTCTCTTCTCGGCATTATGACAAAAAGACAGCGACCCATCTCGCCACCATCAGACAGAAGGAGGGTGAGACGCTGCGAGAATATGTCACCAGATTCCAGGAGGAGCAATTGAAGGTTGCACACTGCTCCGATGACTCGGCCATGTGCTATTTTCTCACCGATCTAACCGACGAAGCCCTCACGGTGAAACTTGGAGAGGAGGCCCTGGCCACCTTCGCCGAGGTGCTTCAGAAGGCGAAGAAAGTCATCGATGGACAGGAGCTCCTCCGAACCAAAACCGGCCGACCCTAA

Coding sequence (CDS)

ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCAGAGCAGCAGTGGTAGAGGGGCAAGGTCACGACGGCTTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTCCTACCACCTGCGCACCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGGACCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCAACAAGTGAGAACTTTGACGCACTCCAGAGAGAAATGGAGGCAATGGGCACACAAATGCGGTCCATGGAGGAAATGTATAACGAGATGATACTAGCTGCAGGCGCAGGGTCCCGATCTGAAAATCGGATGACGCGCATTGAGATACTCGAGCAAAGGGGTTCCCACCTCGGCCCAGTCGAGGAGGAACATCTCGAAGACAACGAGAGCGAGGGACACACTCGCCGGAGGGGAGACCTCCGTGAGCATCTCAACAAAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACACCGGAGCTCCAATCAGCAGGCTGAATCCTCTCACAACCCAGCAACTCCCGCAGGGGTGATCACAAGGGCGGAGTTCGACCAGCTGAGGGGCAAGCTCGACGCTCAGGTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTTCACTGAACGATGGCGACTTGGGAGAATTGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCCGAAGTTCAAAGCTCCTACCGTGAAGCCTTATGATGGGTCGAAGGATCCCAAGGATTATGTTGAGGTCTTTGAAGGCCTCATGGATTTCCAAGCAGCATCAGACGCAATCAAATGCCGCGCCTTTCAGATCGCGCTTACTGGCAGCGCGCAATTGTGGTATCGGAGACTGCCAGCCAGGTCGATCTCGACCTACTCTCAGCTGAGAAGGGAGTTCCTCGCCCAGTTCTCTTCTCGGCATTATGACAAAAAGACAGCGACCCATCTCGCCACCATCAGACAGAAGGAGGGTGAGACGCTGCGAGAATATGTCACCAGATTCCAGGAGGAGCAATTGAAGGTTGCACACTGCTCCGATGACTCGGCCATGTGCTATTTTCTCACCGATCTAACCGACGAAGCCCTCACGGTGAAACTTGGAGAGGAGGCCCTGGCCACCTTCGCCGAGGTGCTTCAGAAGGCGAAGAAAGTCATCGATGGACAGGAGCTCCTCCGAACCAAAACCGGCCGACCCTAA

Protein sequence

MVQPANSTNTADRRTLAASDAHQREVRAAVVEGQGHDGLATEPLRRSARITAPVLPPAHPRTSKATRGRGGTSKKGARGPAPAPTSENFDALQREMEAMGTQMRSMEEMYNEMILAAGAGSRSENRMTRIEILEQRGSHLGPVEEEHLEDNESEGHTRRRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGELPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLMDFQAASDAIKCRAFQIALTGSAQLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTDLTDEALTVKLGEEALATFAEVLQKAKKVIDGQELLRTKTGRP

Homology

[Close]

BLAST of Moc02g02000.1 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 567.4 bits (1461), Expect = 1.1e-157
Identity = 308/425 (72.47%), Postives = 339/425 (79.76%), Query Frame = 0


Query: 1   MVQPANSTNTADRRTLAASDAHQREVRAAVVEGQGHDGLATEPLRRSARITAPVLPPAHP 60
           MVQP +STNT DRR L A+D HQREV A VVEGQ H+GL TEP  RSARIT P L PAHP
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61  RTSKATRGRGGTSKKGARGPAPAPTSENFDALQREMEAMGTQMRSMEEMYNEMILAAGAG 120
           +  KA RGRGG S++   G APAP+ ENFDALQ+EMEAM TQM +MEEMYNEM+ A GAG
Sbjct: 61  KPFKANRGRGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQAVGAG 120

Query: 121 SRSENRMTRIEILEQRGSHLGPVEEEHLEDNESEGHTRRRGDLREHLNKKRGSSLRKGQS 180
           SRSE+R  R E                            RGDLR+HL++KR SSLRKG+S
Sbjct: 121 SRSEDRAARDE----------------------------RGDLRDHLSRKRSSSLRKGRS 180

Query: 181 PSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDL 240
           PS SH++SNQQAESS+NP  P GVITR EFDQL+ K DAQVE LKA+CE K  + +DGDL
Sbjct: 181 PSCSHKNSNQQAESSYNPVVPEGVITREEFDQLKSKFDAQVETLKARCEVKGSTFDDGDL 240

Query: 241 GELPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLMDFQAASDAIKCRAFQIA 300
           GE PFTSD+LEA IP KFK PT+KPYDGSKDPKDYVEVFEGLM FQAA+DAIK RAFQIA
Sbjct: 241 GESPFTSDILEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMGFQAATDAIKYRAFQIA 300

Query: 301 LTGSAQLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVT 360
           LT SA+LWYRRLPARSISTYSQLR+EF +QFSSRHY++KTATHLATIRQKE ETLREYVT
Sbjct: 301 LTSSARLWYRRLPARSISTYSQLRKEFNSQFSSRHYERKTATHLATIRQKERETLREYVT 360

Query: 361 RFQEEQLKVAHCSDDSAMCYFLTDLTDEALTVKLGEEALATFAEVLQKAKKVIDGQELLR 420
            FQEEQLKVAH SDDSA+CYFLTDL DE LTVKLGEEA ATFAEVLQKAKKVIDGQEL R
Sbjct: 361 WFQEEQLKVAHYSDDSALCYFLTDLVDETLTVKLGEEAPATFAEVLQKAKKVIDGQELFR 397

Query: 421 TKTGR 426
           TKTGR
Sbjct: 421 TKTGR 397

[Close]

BLAST of Moc02g02000.1 vs. NCBI nr
Match: XP_022151719.1 (uncharacterized protein LOC111019634 [Momordica charantia])

HSP 1 Score: 505.4 bits (1300), Expect = 4.9e-139
Identity = 264/328 (80.49%), Postives = 289/328 (88.11%), Query Frame = 0


Query: 99  MGTQMRSMEEMYNEMILAAGAGSRSENRMTRIEILEQRGSHLGPVEEEHLEDNESEGHTR 158
           M TQM +ME+MY+EM+ AAGA SRSENR+ R ++ EQRG HLGPV++ H E  E E +T 
Sbjct: 1   MRTQMCTMEKMYSEMVQAAGARSRSENRVARNDMHEQRGHHLGPVKKGHPEGGEDEEYTH 60

Query: 159 RRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLD 218
           +RGDLREHLN+KR SSLRKGQSPS SHR+SNQQAESS+NP TP GVITR EFDQL+ K D
Sbjct: 61  QRGDLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPEGVITREEFDQLKSKFD 120

Query: 219 AQVEALKAKCEQKEGSLNDGDLGELPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEV 278
           AQVEALKAKCE+KE S +DGDLGE PFTSD+LEA IP KFK PT+KPYDGSKDPKDYVEV
Sbjct: 121 AQVEALKAKCEKKESSFDDGDLGESPFTSDILEALIPLKFKTPTMKPYDGSKDPKDYVEV 180

Query: 279 FEGLMDFQAASDAIKCRAFQIALTGSAQLWYRRLPARSISTYSQLRREFLAQFSSRHYDK 338
           FEGLMDFQAA+DAIKCR FQIALTGSA+LWYRRLPARSISTYSQLR+EF+ QFSSRHYD+
Sbjct: 181 FEGLMDFQAATDAIKCRDFQIALTGSARLWYRRLPARSISTYSQLRKEFIIQFSSRHYDR 240

Query: 339 KTATHLATIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTDLTDEALTVKLGEEA 398
           KTATHL TIRQKEGETLREYVTRFQEEQLKVAHCSD SAMCYFLT L DE LTVKL EEA
Sbjct: 241 KTATHLTTIRQKEGETLREYVTRFQEEQLKVAHCSDHSAMCYFLTTLADETLTVKLEEEA 300

Query: 399 LATFAEVLQKAKKVIDGQELLRTKTGRP 427
            ATF EVLQKAKK+IDGQELLRTKT RP
Sbjct: 301 PATFVEVLQKAKKIIDGQELLRTKTDRP 328

[Close]

BLAST of Moc02g02000.1 vs. NCBI nr
Match: XP_022152033.1 (uncharacterized protein LOC111019842 [Momordica charantia])

HSP 1 Score: 469.5 bits (1207), Expect = 3.0e-128
Identity = 243/257 (94.55%), Postives = 247/257 (96.11%), Query Frame = 0


Query: 170 KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCE 229
           +RGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITR EFDQLRGKLDAQVEALKAKCE
Sbjct: 28  QRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRGKLDAQVEALKAKCE 87

Query: 230 QKEGSLNDGDLGELPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLMDFQAAS 289
           QKEGSLNDGDLGE PFTSDVLEAPIP KFKAPTVKPYDGS+DPKDYVEVFEGLMDFQAAS
Sbjct: 88  QKEGSLNDGDLGESPFTSDVLEAPIPXKFKAPTVKPYDGSRDPKDYVEVFEGLMDFQAAS 147

Query: 290 DAIKCRAFQIALTGSAQLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQ 349
           D IKCRAFQIALT SA+LWYRRLPARSISTYSQLRREFLAQFSSRHYDK+TATHLATIRQ
Sbjct: 148 DTIKCRAFQIALTDSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKETATHLATIRQ 207

Query: 350 KEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTDLTDEALTVKLGEEALATFAEVLQKA 409
           KEGETLREYVTRFQEEQLKV HCSDDSAMCYFLT L DEA TVKLGEEA ATFAEVLQKA
Sbjct: 208 KEGETLREYVTRFQEEQLKVTHCSDDSAMCYFLTGLADEAXTVKLGEEAPATFAEVLQKA 267

Query: 410 KKVIDGQELLRTKTGRP 427
           KKVIDGQELLRTKTGRP
Sbjct: 268 KKVIDGQELLRTKTGRP 284

[Close]

BLAST of Moc02g02000.1 vs. NCBI nr
Match: XP_022156088.1 (uncharacterized protein LOC111023060 [Momordica charantia])

HSP 1 Score: 457.2 bits (1175), Expect = 1.5e-124
Identity = 239/331 (72.21%), Postives = 274/331 (82.78%), Query Frame = 0


Query: 96  MEAMGTQMRSMEEMYNEMILAAGAGSRSENRMTRIEILEQRGSHLGPVEEEHLEDNESEG 155
           MEAM TQMR+MEEMYN+M+  AGA SRS +++   ++ EQ   H  PV+EEHL       
Sbjct: 1   MEAMRTQMRTMEEMYNKMVQIAGARSRSGDQVVHEDVHEQGDLHCDPVDEEHL------- 60

Query: 156 HTRRRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRG 215
                GDLR+HLN+KR SS R  ++ +  H++SNQQAESS+NP  P GVITR EF+QL+ 
Sbjct: 61  ----GGDLRDHLNRKRNSSHRGERTSTYWHKNSNQQAESSYNPIAPEGVITREEFNQLKS 120

Query: 216 KLDAQVEALKAKCEQKEGSLNDGDLGELPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDY 275
           K DAQVEALK +CE+KE + +DGDLGE PFTSD+LEA IPPKFK PT+K YDGSKDPKDY
Sbjct: 121 KFDAQVEALKVRCEKKESAFDDGDLGESPFTSDILEASIPPKFKTPTMKSYDGSKDPKDY 180

Query: 276 VEVFEGLMDFQAASDAIKCRAFQIALTGSAQLWYRRLPARSISTYSQLRREFLAQFSSRH 335
           VEVFEGLMDFQAA+DAIKCRAFQIALTGSA+LWYRRLPARSISTYSQLR+EF++QF SRH
Sbjct: 181 VEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRH 240

Query: 336 YDKKTATHLATIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTDLTDEALTVKLG 395
           YD+KT THLATIRQKEG+TL+EY+TRFQEEQLKV HCSDDS+MCYFLT L DE  TVKLG
Sbjct: 241 YDRKTTTHLATIRQKEGKTLKEYITRFQEEQLKVVHCSDDSSMCYFLTGLADETPTVKLG 300

Query: 396 EEALATFAEVLQKAKKVIDGQELLRTKTGRP 427
           EEALATFAEVLQ  KK IDGQELLRTKT RP
Sbjct: 301 EEALATFAEVLQMEKKFIDGQELLRTKTDRP 320

[Close]

BLAST of Moc02g02000.1 vs. NCBI nr
Match: XP_022155128.1 (uncharacterized protein LOC111022267 [Momordica charantia])

HSP 1 Score: 452.2 bits (1162), Expect = 4.9e-123
Identity = 231/277 (83.39%), Postives = 254/277 (91.70%), Query Frame = 0


Query: 150 DNESEGHTRRRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAE 209
           + E E +T +RGDLREHLN+KR SSLRKGQSPS SHR+SNQQAESS+NP TP  VITR E
Sbjct: 31  EGEDEEYTHQRGDLREHLNRKRSSSLRKGQSPSSSHRNSNQQAESSYNPITPKRVITREE 90

Query: 210 FDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGELPFTSDVLEAPIPPKFKAPTVKPYDGS 269
           FDQL+ K DAQVEALKA CE+KE S +DGDLGELPFT D+LEAPI PKFK PT+KPYDGS
Sbjct: 91  FDQLKSKFDAQVEALKANCEKKESSFDDGDLGELPFTLDILEAPIHPKFKTPTMKPYDGS 150

Query: 270 KDPKDYVEVFEGLMDFQAASDAIKCRAFQIALTGSAQLWYRRLPARSISTYSQLRREFLA 329
           K+PKDYV+VFEGLM+FQAA+DAIKCRAFQIA TGSA+LWYRRLPARSISTYSQLR+EF++
Sbjct: 151 KNPKDYVKVFEGLMNFQAATDAIKCRAFQIAFTGSARLWYRRLPARSISTYSQLRKEFIS 210

Query: 330 QFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTDLTDEA 389
           QFSSR+YD+KTATHLATIRQK+GETLREYVTRFQEEQLKVAHCSDDSAMCYFLT L D+ 
Sbjct: 211 QFSSRYYDRKTATHLATIRQKKGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTGLADKT 270

Query: 390 LTVKLGEEALATFAEVLQKAKKVIDGQELLRTKTGRP 427
           LTVKLGEEA ATFAEVLQKAKKVIDGQELLRTKTGRP
Sbjct: 271 LTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRP 307

[Close]

BLAST of Moc02g02000.1 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 5.1e-158
Identity = 308/425 (72.47%), Postives = 339/425 (79.76%), Query Frame = 0


Query: 1   MVQPANSTNTADRRTLAASDAHQREVRAAVVEGQGHDGLATEPLRRSARITAPVLPPAHP 60
           MVQP +STNT DRR L A+D HQREV A VVEGQ H+GL TEP  RSARIT P L PAHP
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61  RTSKATRGRGGTSKKGARGPAPAPTSENFDALQREMEAMGTQMRSMEEMYNEMILAAGAG 120
           +  KA RGRGG S++   G APAP+ ENFDALQ+EMEAM TQM +MEEMYNEM+ A GAG
Sbjct: 61  KPFKANRGRGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQAVGAG 120

Query: 121 SRSENRMTRIEILEQRGSHLGPVEEEHLEDNESEGHTRRRGDLREHLNKKRGSSLRKGQS 180
           SRSE+R  R E                            RGDLR+HL++KR SSLRKG+S
Sbjct: 121 SRSEDRAARDE----------------------------RGDLRDHLSRKRSSSLRKGRS 180

Query: 181 PSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDL 240
           PS SH++SNQQAESS+NP  P GVITR EFDQL+ K DAQVE LKA+CE K  + +DGDL
Sbjct: 181 PSCSHKNSNQQAESSYNPVVPEGVITREEFDQLKSKFDAQVETLKARCEVKGSTFDDGDL 240

Query: 241 GELPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLMDFQAASDAIKCRAFQIA 300
           GE PFTSD+LEA IP KFK PT+KPYDGSKDPKDYVEVFEGLM FQAA+DAIK RAFQIA
Sbjct: 241 GESPFTSDILEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMGFQAATDAIKYRAFQIA 300

Query: 301 LTGSAQLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVT 360
           LT SA+LWYRRLPARSISTYSQLR+EF +QFSSRHY++KTATHLATIRQKE ETLREYVT
Sbjct: 301 LTSSARLWYRRLPARSISTYSQLRKEFNSQFSSRHYERKTATHLATIRQKERETLREYVT 360

Query: 361 RFQEEQLKVAHCSDDSAMCYFLTDLTDEALTVKLGEEALATFAEVLQKAKKVIDGQELLR 420
            FQEEQLKVAH SDDSA+CYFLTDL DE LTVKLGEEA ATFAEVLQKAKKVIDGQEL R
Sbjct: 361 WFQEEQLKVAHYSDDSALCYFLTDLVDETLTVKLGEEAPATFAEVLQKAKKVIDGQELFR 397

Query: 421 TKTGR 426
           TKTGR
Sbjct: 421 TKTGR 397

[Close]

BLAST of Moc02g02000.1 vs. ExPASy TrEMBL
Match: A0A6J1DDW5 (uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019634 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 2.4e-139
Identity = 264/328 (80.49%), Postives = 289/328 (88.11%), Query Frame = 0


Query: 99  MGTQMRSMEEMYNEMILAAGAGSRSENRMTRIEILEQRGSHLGPVEEEHLEDNESEGHTR 158
           M TQM +ME+MY+EM+ AAGA SRSENR+ R ++ EQRG HLGPV++ H E  E E +T 
Sbjct: 1   MRTQMCTMEKMYSEMVQAAGARSRSENRVARNDMHEQRGHHLGPVKKGHPEGGEDEEYTH 60

Query: 159 RRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLD 218
           +RGDLREHLN+KR SSLRKGQSPS SHR+SNQQAESS+NP TP GVITR EFDQL+ K D
Sbjct: 61  QRGDLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPEGVITREEFDQLKSKFD 120

Query: 219 AQVEALKAKCEQKEGSLNDGDLGELPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEV 278
           AQVEALKAKCE+KE S +DGDLGE PFTSD+LEA IP KFK PT+KPYDGSKDPKDYVEV
Sbjct: 121 AQVEALKAKCEKKESSFDDGDLGESPFTSDILEALIPLKFKTPTMKPYDGSKDPKDYVEV 180

Query: 279 FEGLMDFQAASDAIKCRAFQIALTGSAQLWYRRLPARSISTYSQLRREFLAQFSSRHYDK 338
           FEGLMDFQAA+DAIKCR FQIALTGSA+LWYRRLPARSISTYSQLR+EF+ QFSSRHYD+
Sbjct: 181 FEGLMDFQAATDAIKCRDFQIALTGSARLWYRRLPARSISTYSQLRKEFIIQFSSRHYDR 240

Query: 339 KTATHLATIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTDLTDEALTVKLGEEA 398
           KTATHL TIRQKEGETLREYVTRFQEEQLKVAHCSD SAMCYFLT L DE LTVKL EEA
Sbjct: 241 KTATHLTTIRQKEGETLREYVTRFQEEQLKVAHCSDHSAMCYFLTTLADETLTVKLEEEA 300

Query: 399 LATFAEVLQKAKKVIDGQELLRTKTGRP 427
            ATF EVLQKAKK+IDGQELLRTKT RP
Sbjct: 301 PATFVEVLQKAKKIIDGQELLRTKTDRP 328

[Close]

BLAST of Moc02g02000.1 vs. ExPASy TrEMBL
Match: A0A6J1DDS5 (uncharacterized protein LOC111019842 OS=Momordica charantia OX=3673 GN=LOC111019842 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 1.4e-128
Identity = 243/257 (94.55%), Postives = 247/257 (96.11%), Query Frame = 0


Query: 170 KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCE 229
           +RGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITR EFDQLRGKLDAQVEALKAKCE
Sbjct: 28  QRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRGKLDAQVEALKAKCE 87

Query: 230 QKEGSLNDGDLGELPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLMDFQAAS 289
           QKEGSLNDGDLGE PFTSDVLEAPIP KFKAPTVKPYDGS+DPKDYVEVFEGLMDFQAAS
Sbjct: 88  QKEGSLNDGDLGESPFTSDVLEAPIPXKFKAPTVKPYDGSRDPKDYVEVFEGLMDFQAAS 147

Query: 290 DAIKCRAFQIALTGSAQLWYRRLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQ 349
           D IKCRAFQIALT SA+LWYRRLPARSISTYSQLRREFLAQFSSRHYDK+TATHLATIRQ
Sbjct: 148 DTIKCRAFQIALTDSARLWYRRLPARSISTYSQLRREFLAQFSSRHYDKETATHLATIRQ 207

Query: 350 KEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTDLTDEALTVKLGEEALATFAEVLQKA 409
           KEGETLREYVTRFQEEQLKV HCSDDSAMCYFLT L DEA TVKLGEEA ATFAEVLQKA
Sbjct: 208 KEGETLREYVTRFQEEQLKVTHCSDDSAMCYFLTGLADEAXTVKLGEEAPATFAEVLQKA 267

Query: 410 KKVIDGQELLRTKTGRP 427
           KKVIDGQELLRTKTGRP
Sbjct: 268 KKVIDGQELLRTKTGRP 284

[Close]

BLAST of Moc02g02000.1 vs. ExPASy TrEMBL
Match: A0A6J1DPN4 (uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023060 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 7.4e-125
Identity = 239/331 (72.21%), Postives = 274/331 (82.78%), Query Frame = 0


Query: 96  MEAMGTQMRSMEEMYNEMILAAGAGSRSENRMTRIEILEQRGSHLGPVEEEHLEDNESEG 155
           MEAM TQMR+MEEMYN+M+  AGA SRS +++   ++ EQ   H  PV+EEHL       
Sbjct: 1   MEAMRTQMRTMEEMYNKMVQIAGARSRSGDQVVHEDVHEQGDLHCDPVDEEHL------- 60

Query: 156 HTRRRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRG 215
                GDLR+HLN+KR SS R  ++ +  H++SNQQAESS+NP  P GVITR EF+QL+ 
Sbjct: 61  ----GGDLRDHLNRKRNSSHRGERTSTYWHKNSNQQAESSYNPIAPEGVITREEFNQLKS 120

Query: 216 KLDAQVEALKAKCEQKEGSLNDGDLGELPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDY 275
           K DAQVEALK +CE+KE + +DGDLGE PFTSD+LEA IPPKFK PT+K YDGSKDPKDY
Sbjct: 121 KFDAQVEALKVRCEKKESAFDDGDLGESPFTSDILEASIPPKFKTPTMKSYDGSKDPKDY 180

Query: 276 VEVFEGLMDFQAASDAIKCRAFQIALTGSAQLWYRRLPARSISTYSQLRREFLAQFSSRH 335
           VEVFEGLMDFQAA+DAIKCRAFQIALTGSA+LWYRRLPARSISTYSQLR+EF++QF SRH
Sbjct: 181 VEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRH 240

Query: 336 YDKKTATHLATIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTDLTDEALTVKLG 395
           YD+KT THLATIRQKEG+TL+EY+TRFQEEQLKV HCSDDS+MCYFLT L DE  TVKLG
Sbjct: 241 YDRKTTTHLATIRQKEGKTLKEYITRFQEEQLKVVHCSDDSSMCYFLTGLADETPTVKLG 300

Query: 396 EEALATFAEVLQKAKKVIDGQELLRTKTGRP 427
           EEALATFAEVLQ  KK IDGQELLRTKT RP
Sbjct: 301 EEALATFAEVLQMEKKFIDGQELLRTKTDRP 320

[Close]

BLAST of Moc02g02000.1 vs. ExPASy TrEMBL
Match: A0A6J1DM55 (uncharacterized protein LOC111022267 OS=Momordica charantia OX=3673 GN=LOC111022267 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 2.4e-123
Identity = 231/277 (83.39%), Postives = 254/277 (91.70%), Query Frame = 0


Query: 150 DNESEGHTRRRGDLREHLNKKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAE 209
           + E E +T +RGDLREHLN+KR SSLRKGQSPS SHR+SNQQAESS+NP TP  VITR E
Sbjct: 31  EGEDEEYTHQRGDLREHLNRKRSSSLRKGQSPSSSHRNSNQQAESSYNPITPKRVITREE 90

Query: 210 FDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGELPFTSDVLEAPIPPKFKAPTVKPYDGS 269
           FDQL+ K DAQVEALKA CE+KE S +DGDLGELPFT D+LEAPI PKFK PT+KPYDGS
Sbjct: 91  FDQLKSKFDAQVEALKANCEKKESSFDDGDLGELPFTLDILEAPIHPKFKTPTMKPYDGS 150

Query: 270 KDPKDYVEVFEGLMDFQAASDAIKCRAFQIALTGSAQLWYRRLPARSISTYSQLRREFLA 329
           K+PKDYV+VFEGLM+FQAA+DAIKCRAFQIA TGSA+LWYRRLPARSISTYSQLR+EF++
Sbjct: 151 KNPKDYVKVFEGLMNFQAATDAIKCRAFQIAFTGSARLWYRRLPARSISTYSQLRKEFIS 210

Query: 330 QFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTDLTDEA 389
           QFSSR+YD+KTATHLATIRQK+GETLREYVTRFQEEQLKVAHCSDDSAMCYFLT L D+ 
Sbjct: 211 QFSSRYYDRKTATHLATIRQKKGETLREYVTRFQEEQLKVAHCSDDSAMCYFLTGLADKT 270

Query: 390 LTVKLGEEALATFAEVLQKAKKVIDGQELLRTKTGRP 427
           LTVKLGEEA ATFAEVLQKAKKVIDGQELLRTKTGRP
Sbjct: 271 LTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRP 307

The following BLAST results are available for this feature:

BLAST of Moc02g02000.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159327.1	1.1e-157	72.47	uncharacterized protein LOC111025738 [Momordica charantia]	[more]
XP_022151719.1	4.9e-139	80.49	uncharacterized protein LOC111019634 [Momordica charantia]	[more]
XP_022152033.1	3.0e-128	94.55	uncharacterized protein LOC111019842 [Momordica charantia]	[more]
XP_022156088.1	1.5e-124	72.21	uncharacterized protein LOC111023060 [Momordica charantia]	[more]
XP_022155128.1	4.9e-123	83.39	uncharacterized protein LOC111022267 [Momordica charantia]	[more]

BLAST of Moc02g02000.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc02g02000.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZJ1	5.1e-158	72.47	uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DDW5	2.4e-139	80.49	uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1DDS5	1.4e-128	94.55	uncharacterized protein LOC111019842 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1DPN4	7.4e-125	72.21	uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DM55	2.4e-123	83.39	uncharacterized protein LOC111022267 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of Moc02g02000.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..169
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 297..382 e-value: 1.6E-14 score: 53.9

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc02g02000	Moc02g02000	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc02g02000.1.exon1	Moc02g02000.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc02g02000.1	cds.Moc02g02000.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc02g02000.1	Moc02g02000.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane