MS027930.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS027930.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	auxin-responsive protein SAUR21-like
Location	scaffold375: 1469250 .. 1469549 (-)
Sequence length	300
RNA-Seq Expression	MS027930.1
Synteny	MS027930.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATCCGTTTACAGAGCGCCATTCTCACAAAGAAAGTTCTTAAATGGTGCATTTTGAGTGAAAGAGAGGCAATTTCAACATCATTGGAGGTTCCAAAAGGCTTCTTTGCAGTTTATGTAGAAGAGAGCCTCAGAAAACGCTATGTGGTTCCAATATCATACTTAAAACAGCCCTCATTCCAGGATTTGCTAAAAAGAGCTGAAGAAGAATTTGGTTTTGGTCACCCAATGGGCAGCCTAACTATTCCCTGCACAGAAGATACTTTCATTGAAGTCACTTCTAGGCTTCGGCATTAG

mRNA sequence

ATGGGAATCCGTTTACAGAGCGCCATTCTCACAAAGAAAGTTCTTAAATGGTGCATTTTGAGTGAAAGAGAGGCAATTTCAACATCATTGGAGGTTCCAAAAGGCTTCTTTGCAGTTTATGTAGAAGAGAGCCTCAGAAAACGCTATGTGGTTCCAATATCATACTTAAAACAGCCCTCATTCCAGGATTTGCTAAAAAGAGCTGAAGAAGAATTTGGTTTTGGTCACCCAATGGGCAGCCTAACTATTCCCTGCACAGAAGATACTTTCATTGAAGTCACTTCTAGGCTTCGGCATTAG

Coding sequence (CDS)

ATGGGAATCCGTTTACAGAGCGCCATTCTCACAAAGAAAGTTCTTAAATGGTGCATTTTGAGTGAAAGAGAGGCAATTTCAACATCATTGGAGGTTCCAAAAGGCTTCTTTGCAGTTTATGTAGAAGAGAGCCTCAGAAAACGCTATGTGGTTCCAATATCATACTTAAAACAGCCCTCATTCCAGGATTTGCTAAAAAGAGCTGAAGAAGAATTTGGTTTTGGTCACCCAATGGGCAGCCTAACTATTCCCTGCACAGAAGATACTTTCATTGAAGTCACTTCTAGGCTTCGGCATTAG

Protein sequence

MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLRH

Homology

[Close]

BLAST of MS027930.1 vs. NCBI nr
Match: XP_022146160.1 (auxin-responsive protein SAUR21-like [Momordica charantia])

HSP 1 Score: 200.7 bits (509), Expect = 6.0e-48
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPS 60
           MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPS
Sbjct: 1   MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPS 60

Query: 61  FQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLRH 100
           FQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLRH
Sbjct: 61  FQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLRH 99

[Close]

BLAST of MS027930.1 vs. NCBI nr
Match: XP_031285049.1 (auxin-responsive protein SAUR21-like [Pistacia vera])

HSP 1 Score: 136.7 bits (343), Expect = 1.1e-28
Identity = 65/97 (67.01%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 1  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPS 60
          MGIR+   IL K+VL   + + ++ +STSL+VPKGFFAVYV E+ +KR+VVP+SYL QP 
Sbjct: 1  MGIRIPGFILAKQVLCQSVQTAKKGVSTSLDVPKGFFAVYVGETQKKRFVVPVSYLNQPL 60

Query: 61 FQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL 98
          FQDLL +AEEEFGF HPMG LTIPC EDTFI+VTSRL
Sbjct: 61 FQDLLNKAEEEFGFNHPMGDLTIPCGEDTFIDVTSRL 97

[Close]

BLAST of MS027930.1 vs. NCBI nr
Match: XP_024957863.1 (auxin-responsive protein SAUR21-like [Citrus sinensis] >GAY61972.1 hypothetical protein CUMW_214180 [Citrus unshiu])

HSP 1 Score: 135.2 bits (339), Expect = 3.1e-28
Identity = 64/97 (65.98%), Postives = 78/97 (80.41%), Query Frame = 0


Query: 1  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPS 60
          MGIRL   IL K++L+   L+ ++  STSL+VPKGF AVYV E+ RKR++VP+SYL QP 
Sbjct: 1  MGIRLPDFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60

Query: 61 FQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL 98
          FQDLL RAEEEFGF HPMG LTIPC E+TFI++TSRL
Sbjct: 61 FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRL 97

[Close]

BLAST of MS027930.1 vs. NCBI nr
Match: XP_006423536.1 (auxin-responsive protein SAUR21 [Citrus clementina] >ESR36776.1 hypothetical protein CICLE_v10029654mg [Citrus clementina] >KDO46701.1 hypothetical protein CISIN_1g036909mg [Citrus sinensis])

HSP 1 Score: 135.2 bits (339), Expect = 3.1e-28
Identity = 64/97 (65.98%), Postives = 78/97 (80.41%), Query Frame = 0


Query: 1  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPS 60
          MGIRL   IL K++L+   L+ ++  STSL+VPKGF AVYV E+ RKR++VP+SYL QP 
Sbjct: 1  MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60

Query: 61 FQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL 98
          FQDLL RAEEEFGF HPMG LTIPC E+TFI++TSRL
Sbjct: 61 FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRL 97

[Close]

BLAST of MS027930.1 vs. NCBI nr
Match: XP_015577284.1 (auxin-responsive protein SAUR21-like [Ricinus communis])

HSP 1 Score: 132.1 bits (331), Expect = 2.6e-27
Identity = 62/97 (63.92%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 1  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPS 60
          MG+RL  AIL K++L+  +L+  +A S S EVPKGF AVYV ++ RKR+++P+SYLKQPS
Sbjct: 1  MGVRLPGAILAKQILRRSVLTANKASSASPEVPKGFLAVYVGQTERKRFMIPVSYLKQPS 60

Query: 61 FQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL 98
          FQ LL++AEEEFGF HPMG LTIPC ED FI+VTS+L
Sbjct: 61 FQALLRKAEEEFGFDHPMGGLTIPCREDIFIDVTSQL 97

[Close]

BLAST of MS027930.1 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.7e-24
Identity = 52/72 (72.22%), Postives = 59/72 (81.94%), Query Frame = 0


Query: 27 STSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCT 86
          ST+   PKGF AVYV ES +KRY+VP+SYL QPSFQ LL ++EEEFGF HPMG LTIPC 
Sbjct: 17 STASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCP 76

Query: 87 EDTFIEVTSRLR 99
          EDTFI VTSRL+
Sbjct: 77 EDTFINVTSRLQ 88

[Close]

BLAST of MS027930.1 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 8.2e-24
Identity = 57/93 (61.29%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 5  LQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDL 64
          ++S ++ KK+L       R A + S   PKGF AVYV ES +KRY+VP+SYL QPSFQ L
Sbjct: 4  VRSLLVAKKIL------SRSAAAVSAP-PKGFLAVYVGESQKKRYLVPLSYLNQPSFQAL 63

Query: 65 LKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL 98
          L ++EEEFGF HPMG LTIPC EDTFI VTSRL
Sbjct: 64 LSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of MS027930.1 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-23
Identity = 54/80 (67.50%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 19 ILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPM 78
          ILS   A  ++   PKGF AVYV ES +KRY+VP+SYL QPSFQ LL ++EEEFGF HPM
Sbjct: 13 ILSRSTAAGSA--APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPM 72

Query: 79 GSLTIPCTEDTFIEVTSRLR 99
          G LTIPC EDTFI VTSRL+
Sbjct: 73 GGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of MS027930.1 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-23
Identity = 50/66 (75.76%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 33 PKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIE 92
          PKGF AVYV ES +KRY+VP+SYL QPSFQ LL ++EEEFGF HPMG LTIPC EDTFI 
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 93 VTSRLR 99
          VTSRL+
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of MS027930.1 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.3e-23
Identity = 54/94 (57.45%), Postives = 66/94 (70.21%), Query Frame = 0


Query: 5  LQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDL 64
          ++S +  KK+L         + + +   PKGF AVYV ES +KRY+VPISYL QPSFQ L
Sbjct: 4  VRSLLGAKKILS-------RSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQAL 63

Query: 65 LKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLR 99
          L ++EEEFGF HPMG LTIPC EDTFI VTSR +
Sbjct: 64 LSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of MS027930.1 vs. ExPASy TrEMBL
Match: A0A6J1CWH9 (auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015442 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.9e-48
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPS 60
           MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPS
Sbjct: 1   MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPS 60

Query: 61  FQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLRH 100
           FQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLRH
Sbjct: 61  FQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLRH 99

[Close]

BLAST of MS027930.1 vs. ExPASy TrEMBL
Match: A0A067E748 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g036909mg PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.5e-28
Identity = 64/97 (65.98%), Postives = 78/97 (80.41%), Query Frame = 0


Query: 1  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPS 60
          MGIRL   IL K++L+   L+ ++  STSL+VPKGF AVYV E+ RKR++VP+SYL QP 
Sbjct: 1  MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60

Query: 61 FQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL 98
          FQDLL RAEEEFGF HPMG LTIPC E+TFI++TSRL
Sbjct: 61 FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRL 97

[Close]

BLAST of MS027930.1 vs. ExPASy TrEMBL
Match: V4SIC7 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029654mg PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.5e-28
Identity = 64/97 (65.98%), Postives = 78/97 (80.41%), Query Frame = 0


Query: 1  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPS 60
          MGIRL   IL K++L+   L+ ++  STSL+VPKGF AVYV E+ RKR++VP+SYL QP 
Sbjct: 1  MGIRLPGFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60

Query: 61 FQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL 98
          FQDLL RAEEEFGF HPMG LTIPC E+TFI++TSRL
Sbjct: 61 FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRL 97

[Close]

BLAST of MS027930.1 vs. ExPASy TrEMBL
Match: A0A2H5QBL5 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_214180 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.5e-28
Identity = 64/97 (65.98%), Postives = 78/97 (80.41%), Query Frame = 0


Query: 1  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPS 60
          MGIRL   IL K++L+   L+ ++  STSL+VPKGF AVYV E+ RKR++VP+SYL QP 
Sbjct: 1  MGIRLPDFILAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFLVPVSYLNQPL 60

Query: 61 FQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL 98
          FQDLL RAEEEFGF HPMG LTIPC E+TFI++TSRL
Sbjct: 61 FQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRL 97

[Close]

BLAST of MS027930.1 vs. ExPASy TrEMBL
Match: A0A5J5BWK6 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_020492 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.3e-27
Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 1   MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPS 60
           MGIR+   I TKK+L+W  L   +A ST+ +VP G+F VYV ES +KR+V+P+SYL QPS
Sbjct: 98  MGIRMPRIIHTKKILRWPSLMANQAASTATDVPNGYFPVYVGESEKKRFVIPVSYLNQPS 157

Query: 61  FQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL 98
           FQDLL +AEEE+GF HPMG LTIPC ED FI++TSRL
Sbjct: 158 FQDLLTKAEEEYGFDHPMGGLTIPCREDIFIDLTSRL 194

[Close]

BLAST of MS027930.1 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.6 bits (283), Expect = 9.0e-26
Identity = 55/97 (56.70%), Postives = 73/97 (75.26%), Query Frame = 0


Query: 1  MGIRLQSAI-LTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQP 60
          M IR+   +  +K++L+   L    + S+SL+VPKG+ AVYV E   KR+VVP+SYL QP
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSR 97
          SFQDLL++AEEEFGF HPMG LTIPC+E+ FI++ SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of MS027930.1 vs. TAIR 10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 2.6e-25
Identity = 52/72 (72.22%), Postives = 59/72 (81.94%), Query Frame = 0


Query: 27 STSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCT 86
          ST+   PKGF AVYV ES +KRY+VP+SYL QPSFQ LL ++EEEFGF HPMG LTIPC 
Sbjct: 17 STASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCP 76

Query: 87 EDTFIEVTSRLR 99
          EDTFI VTSRL+
Sbjct: 77 EDTFINVTSRLQ 88

[Close]

BLAST of MS027930.1 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 5.8e-25
Identity = 57/93 (61.29%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 5  LQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDL 64
          ++S ++ KK+L       R A + S   PKGF AVYV ES +KRY+VP+SYL QPSFQ L
Sbjct: 4  VRSLLVAKKIL------SRSAAAVSAP-PKGFLAVYVGESQKKRYLVPLSYLNQPSFQAL 63

Query: 65 LKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL 98
          L ++EEEFGF HPMG LTIPC EDTFI VTSRL
Sbjct: 64 LSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of MS027930.1 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.5 bits (275), Expect = 7.6e-25
Identity = 54/80 (67.50%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 19 ILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPM 78
          ILS   A  ++   PKGF AVYV ES +KRY+VP+SYL QPSFQ LL ++EEEFGF HPM
Sbjct: 13 ILSRSTAAGSA--APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPM 72

Query: 79 GSLTIPCTEDTFIEVTSRLR 99
          G LTIPC EDTFI VTSRL+
Sbjct: 73 GGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of MS027930.1 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-24
Identity = 50/66 (75.76%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 33 PKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIE 92
          PKGF AVYV ES +KRY+VP+SYL QPSFQ LL ++EEEFGF HPMG LTIPC EDTFI 
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 93 VTSRLR 99
          VTSRL+
Sbjct: 85 VTSRLQ 90

The following BLAST results are available for this feature:

BLAST of MS027930.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146160.1	6.0e-48	100.00	auxin-responsive protein SAUR21-like [Momordica charantia]	[more]
XP_031285049.1	1.1e-28	67.01	auxin-responsive protein SAUR21-like [Pistacia vera]	[more]
XP_024957863.1	3.1e-28	65.98	auxin-responsive protein SAUR21-like [Citrus sinensis] >GAY61972.1 hypothetical ...	[more]
XP_006423536.1	3.1e-28	65.98	auxin-responsive protein SAUR21 [Citrus clementina] >ESR36776.1 hypothetical pro...	[more]
XP_015577284.1	2.6e-27	63.92	auxin-responsive protein SAUR21-like [Ricinus communis]	[more]

BLAST of MS027930.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJF9	3.7e-24	72.22	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
Q9FJF6	8.2e-24	61.29	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]
Q9FJG1	1.1e-23	67.50	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FK62	1.8e-23	75.76	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	5.3e-23	57.45	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]

BLAST of MS027930.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWH9	2.9e-48	100.00	auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A067E748	1.5e-28	65.98	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g036909mg PE=3 SV=1	[more]
V4SIC7	1.5e-28	65.98	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029654mg PE=3 ...	[more]
A0A2H5QBL5	1.5e-28	65.98	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_214180 PE=3 SV=1	[more]
A0A5J5BWK6	1.3e-27	62.89	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_020492 PE=3 SV=1	[more]

BLAST of MS027930.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	9.0e-26	56.70	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	2.6e-25	72.22	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	5.8e-25	61.29	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	7.6e-25	67.50	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	1.3e-24	75.76	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 26..96 e-value: 2.8E-22 score: 78.7
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 2..98
None	No IPR available	PANTHER	PTHR31929:SF113	SAUR FAMILY PROTEIN	coord: 2..98

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS027930	MS027930	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS027930.1-cds	MS027930.1-cds-scaffold375:1469250..1469549	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS027930.1	MS027930.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin