MS026372.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS026372.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	PMEI domain-containing protein
Location	scaffold459: 842413 .. 848389 (-)
Sequence length	1167
RNA-Seq Expression	MS026372.1
Synteny	MS026372.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCAATTACATGTTCTTGTTTTTATAATTTTATTTACCTGTTCTGTAGCTGCCAATGTTATAGATCCGAAGACGGAGCTGGCAAATGATTTTATCCGAGATACATGCAACAAATTTGAATTGAAAGAGCTTTGCATTACTGTGATCAATTCAGATGTTCGTGAAGATTTGAAATCAAACTTGACTGGTCTTCTCACCATACTCGTCAACCATACTTTATATGCTGTTGTTGATAATCATTCTTACCTTGACAATCAAATACAAAGTGGACATTTAGGGAGCCGAACACGTCAGGTTTTTGTTGGGTGCTTGGATGATTATCAAATGATCCAAAATTCTCTAAACTATGTATTGACGGAAAAACTATTGAAGGAACATAATTCAGATTTGAATTTGGATTTGTCACAAATTGCTAGTTATTTAACTACTTGTGAGGATGATTTTGTGGAGTTTACACCCGAGCCCCCGATTTGGAAGTCTCGCTTTGATCATGTGTCGTCATTCATGATACTCTTATTCGACATGACAAATCTCAGCCAATGTGGTCGTGTTACACCGGTTTGTTAAGTTATCCAAGTTCATATTGGTTTGCTCTTGTGCAGTACTTTATATTTTATTGTTGTTGCCCTTTCTAATATATTTTAATAAAGGTTTTGTGTTTTTTGTTGGGTCAACATGACCTGCGTTTTATATTAAAAATATCTCTTTAACATAGTCTTCTAATCTTAATCTCACAAGCAAATATAATGAAGATAGTGACAATTACATTATATTGTGTCCCTTGACATCGGCAATTCAAATTTTAACCTAATATAAATGAAAAAGTCAATTTTGTATCGTAATTTTTCCTAACTTGCTCCAATAAATTTTCTAGAGCATTTGTAGTTAATAATTAGGCAATTTCTATTTTTTTGAAATATAACAATTATCTTTTTCCTATCTTGAAAATTTGAAGTATAATATTGTAGAGTTCTCCTAACTTTTAACCCTTTGTACTCAATTCCATATTTATATTAGTTAATCAAAACACAAATTTTCATATAAGACTTTGAGATTTTTTTTAGTACAAAACTTATGAGAAATTACCTCATGCTTCTTCCAAAAAATCTCTGATCCTTCTTCTTTTCTTTTTTTCCCATTCTTTGTAATCAAAATTTTAGAGATTCTAAATCTAGTTTCTCATTTGGCACAAACACTAATTGTTCAATTTCTATTTCATATTTTATATTCCCTTTACTTGGTATTTTTCAATGGAAAATGAAACCAATAGATTATAAATGGAATTGAAAAAGAATATATGTACGTAAATACTTAAGTTCGGAAGGGTGAGAACATATTATATTGTTTTTTAGTACAATGTGTGGGAGTGTGGATCAAACTCACAACCTCTTAGTTGGACATATATGTCACGTTAAGCTATGCTCACTTTGGCCATATTTTTGTTTTTTAAAAAATATAATGATATACCAATTTTTCAATAGTGATTAGAATAGAGACATGACTTATACGTATATAATGATAATATTTTGTAGTTTCATTCTTTTTTTCCTCCTATATTATAAAAGAAAATAAACTCTAGTAAAGTTTTCTATTATTACGTATATACATAAACACACATATATACACTTCAATGTGTACTGTATTGGTATATACATTATATAAGAATAAATGTTTCCAAATGCAAGTGGTCAGCTCAATGCTCAGTAAAATTTATAATTATGAATTATATGTAAACACAATTTACAATTATGTATGGAGAAATAAAAATAAAAAATTGTCTAAATTAAAAATGATGAAAAGTACGTACATATTATTATGAAATTATCTAGTATTGAAACAGTTTTATGATTCCATTAAATTGTTAGAAAGTCCTTAATCGATTTATTTCATTTGGTATATTAAAGTTTTGTGGTCTCATTCATTTTTAATTTCATTTCCTATTTTATATTCTTTTTAGTCAATTTTGTTTAACTTACTTTTTAAAATTGATTGGTTTCTCGTCTGTCTATTACCTCTGAAACAGTTAATTGCATTTAATGTAGCACATGTTGAAGAGGTATCTGTGTTCATTTCTAACTTATTCTGTTGCTTCATTTTTAATGTAATAGAAGGGTAATATTAATTAATACTTAAATATAATTAGGATATCAAGTGTTAGAATCCTACATCCAACATGATGTTTCATTTATATAACCACGTAAAAATAATTAAGCAGCACCTGGAGACCAATTTTAAAAGTTATATCAATTTCTGGTAGCCATGCAAGACCATCAATGAAATTTTCAATGGTGAATCGTGAGGCTTCATCTTCATTTTGCAACATGTGATAATCGGGTCATTTCACCTTCTGAGTAGCGTTAGCTCTCTCGAATCCCTGTTGTTTGTATATCCAACATAAAATAAGTATATTGGTGTCCCTGACCATTCCGACCATCCTCCTAGTTCAATTACATCATCTAGGAAAGACTCCATGAAAATAACTGTAGAGTAGTAGCTCCTCCATAGTTGTCCAAGAGACATCGTTACTTGATCCTTGCTTGACTAGATCTCCAGTGACACCGTTACGTTGTAATTTTGGAAGGTGAAACCACTACGTTGTTCATTGTAGAATTTGGACTGTGCAGTGATAATAGTGCCCAATAACCGCGCGTAATATTACAGTCTTAGAATATGACAAGTCCATCTACAAAAATAAAATCGACGCTTCTAGATACGTCGCACTGTGTTTTTATTTACGTGTCTAACAAAAATTATTGTGTGTACTGATATTACGAGTTATATGTGACTATCCTGTTCTGTAATAAAATGTTTTGAACAATCAGAAATTACTCTTTTGATATATTAATATACCTTCATTATTGAGAATATTTCGAAAAAAATAAAAAATAAAAACTTGACTACTTAATTTCATGTTTGTGTGGAGAGGTTCCAACTCTGAAATTATTTATTTTCTTCTCATTTCTTGACATGTCCGCTTTTTTTTTGTTTCAAATTTTCTGCTTTTTTTTGCTTGTTTTTTAAGTACTTAAATTTTCTGCTTTTAGAATTTGGGAAGAAGAAACATATTTTAAATATAAAACAAATTATATATTTAAAAGAAAGTAAAATTGCAAAAACCATGTTTGAGGTTGTTACAAACAACCAAACCTTTGATCAATCAACCCCTATATTTACCCAATTGTTGCGATCAAACATTTTATTTTCTTAATTGATATATCAATTAGAGTTGAAAATTAAAATTTTCAATGATTAATAGTATAGTTTTAAAATGGTATAATTTTTTTAATTCAGTTAAATTATAATAATCTGAGTTTGGTTGTAACAATTATTGTAGTTCCAAGGCAGGGGTGTCTTTTACAATATTTAAAGATTTAAGATTGATTTTGGACATCCAGTTGTCNNNNNNNNNNNNNNNNNNNNNNNNNTAATTTTTTTAGTTATATATATATGGTAATTAAGGATATATATATATATATATATATATAGTAATTAATAAGGAAAAATGTTGTCTACATGTATATGGCTAGGTTATAACAATTTCCTTTTCTTCAGTGATATTCACAATAACTCTCATTATATTTTCAAAAAAAGAAAAAAAAAAAAAAAAAACAACTCTCTTTATTATTGTTATTTTTTTAATCTTTCACAATAACTCTCTTTAATGCATGAAATTACGAAACGAAAAACCTTATTTCCAAACAAAATGACTCACTATCTTCAATATAAATATTCGACATTTCATTTCAAAATATATATATTCAACATTTACAGATTTTACACGAGGTATAGAATAACAAGTATTCAAAAAAAGATGAATCTATTATACCTTATTTCCACTCCTGCTTTTATAATTTTATTTATTTGTTCTTCAGTAACTTATAGATTCGAAAACTAAGGTGGCAAATGATTTTATATGAGATACATGCCACAAAATTGAAGATCAATTTAAAGAGTTTTGCATTTTTGTGATCAATTCAAATGTTCGTGAAGATTTGAAATCAAATTTATGTGGTTTCTCACTATATTTGTCAACCATACTTTCTATGTCATTGTTGATAATCATTCTTACCTTGATAATCAAATAAAAAGTGGATATTTAGGGAACCTAACGCATCAGGTTTTGTTGGGTGCTTGGATGACTATCAAATGAACCAGGATTCTTTAAAGCTATATTGACAGAAAACTATTGAATGAACATAATTCAGTTTTGAATTTTGATTTGTTAGGAATTGCTAGCTATTTAACTACTTGTGAGAATGATTTTGTGGGGTTTATACCCGAACCCTCAATTTGGAAGTGCCGCTTTGATCATGTGTGTCGTCGTTCTTGATACACATGACAAATCTCATCAAATGTGATCATATTGATCAAAACTTGTTTGTTAGGTTATTACCCAAGTTTTTGGTTTGTTCTTATGCAATACTTCACATTTTTTTGTTGTTGTCCTTTCTAGTCTATTTTAATAAGGATTTACTGTTATACAATATCTACAATACTTTAAATTATCTTTTTAACATACTCTTTTAATCTTAATCTTTCAAACAAACCAAGGTAGTAGCCACTGCATTATACTTGTGTCCCTTTATATCCGCAGTTTAAATTTCAACCTCATATTCATTATATTGAGAAAAATGAAAAAATCAATATTGTATCACTCAATAAATTTTCTAGAGCATTTGTAGTATAAATTTCAAATTAAAAAAAGATGTAATTTTCTAAACTTTAAAAAGAGTCTAATAAGTCAGGAAATGTTGGTTTTATTTGATTTTAGGTCAAACCAAAATTTGAAAATACAAATAACAAAAAACTCATGCAGAACCTATATAGCTTCATTAACCGAAAATGAATTAAATTATTCAATTTGACTATTATTATGAATCGAAAATCGAACCGCAAAATTGATGATACTGATTTTCGATTTGGTTCAATTTTTATTTTCTTTCTATTTTTGTTGTGATTTGTATATATGATTTGGTATAATTATTTTAAAGATACACTATTACAATATTTTGAATTTAGACCATGATTATATGAGAGGATCTATTTGGTAATGATATACACGTCCTTGTGTTTGTTTGGAAAGGAAAAAATTTTATTATTATTATTATTTTTTGAAAGTTGGGAAAAGAAAGTTACTTAATATTGCTCTCTTTTTTTTTGGAAATTAATATTGCTCATTTAAAAGATTGGTTTTGGACATCCAGTTGTCATATATATATACGGTAATTGAGGAAATTTTGTCTATGTATATATGCCTTGGTTATAATCATTTCCTTATTTAGTGATACTCACAATAACTCTCTTTAATGCATGAAAATACGAAATTAAAAACTCATTATCTTCAGTATAAATATAAAACATTTACACAATGTAGAAGAACCAGTTTCCAAAGAACAAAATGAATCAATTACCTGTTCTTGTTTTTATAATTTTATTTATTTGGTCTGCAGCAGCCAATGTTGTTGTAGATGAGAAGACGAAGGTGGCGAATGATTTTGTCCGAGATACATGCAACAAAACTGATTTTAAAGAGGTTTGCATTTCTGTGATCAATTCAGATGTTCATGAAGATTTGAAATCAAACTTGACTGGTCTTCTCACCCTATTCGTCAACCATTCTTTATATGCCGTTATTGATAATCATTCTTACCTTGATAACCAAATAAAAAGTGGACATTTAGGGGATCGAACACGTCAGGTCTTTGTTGGGTGCTTGGATGACTATCGAATGAGCAAGAATTCTTTAGGCTATATGTTGACGGAAAAACTGTTGAAGGAACATAATTCAGATTTGAATTTGGATTTGTCAGGAATTGCAAGCTACTTAACTACTTGTGAGGATGATTTTGTGGGGTTTACACCTGAGCCCTCAGTTTGGAAGTCCCGCTTTGATTATGCGTCTACGTTAGTGATACTTGCATTGGACATGACAAATCTCAACAAATGTGGTCACATTGATCAACCTGTTTGTTAG

mRNA sequence

ATGAATCAATTACATGTTCTTGTTTTTATAATTTTATTTACCTGTTCTGTAGCTGCCAATGTTATAGATCCGAAGACGGAGCTGGCAAATGATTTTATCCGAGATACATGCAACAAATTTGAATTGAAAGAGCTTTGCATTACTGTGATCAATTCAGATGTTCGTGAAGATTTGAAATCAAACTTGACTGGTCTTCTCACCATACTCGTCAACCATACTTTATATGCTGTTGTTGATAATCATTCTTACCTTGACAATCAAATACAAAGTGGACATTTAGGGAGCCGAACACGTCAGGTTTTTGTTGGGTGCTTGGATGATTATCAAATGATCCAAAATTCTCTAAACTATGTATTGACGGAAAAACTATTGAAGGAACATAATTCAGATTTGAATTTGGATTTGTCACAAATTGCTAGTTATTTAACTACTTGTGAGGATGATTTTGTGGAGTTTACACCCGAGCCCCCGATTTGGAAGTCTCGCTTTGATCATGTGTCGTCATTCATGATACTCTTATTCGACATGACAAATCTCAGCCAATGTGGTCGTGTTACACCGAGTAGTAGCTCCTCCATAGTTGTCCAAGAGACATCGTTACTTGATCCTTGCTTGACTAGATCTCCAGTGACACCGTTACGTTCAGCCAATGTTGTTGTAGATGAGAAGACGAAGGTGGCGAATGATTTTGTCCGAGATACATGCAACAAAACTGATTTTAAAGAGGTTTGCATTTCTGTGATCAATTCAGATGTTCATGAAGATTTGAAATCAAACTTGACTGGTCTTCTCACCCTATTCGTCAACCATTCTTTATATGCCGTTATTGATAATCATTCTTACCTTGATAACCAAATAAAAAGTGGACATTTAGGGGATCGAACACGTCAGGTCTTTGTTGGGTGCTTGGATGACTATCGAATGAGCAAGAATTCTTTAGGCTATATGTTGACGGAAAAACTGTTGAAGGAACATAATTCAGATTTGAATTTGGATTTGTCAGGAATTGCAAGCTACTTAACTACTTGTGAGGATGATTTTGTGGGGTTTACACCTGAGCCCTCAGTTTGGAAGTCCCGCTTTGATTATGCGTCTACGTTAGTGATACTTGCATTGGACATGACAAATCTCAACAAATGTGGTCACATTGATCAACCTGTTTGTTAG

Coding sequence (CDS)

ATGAATCAATTACATGTTCTTGTTTTTATAATTTTATTTACCTGTTCTGTAGCTGCCAATGTTATAGATCCGAAGACGGAGCTGGCAAATGATTTTATCCGAGATACATGCAACAAATTTGAATTGAAAGAGCTTTGCATTACTGTGATCAATTCAGATGTTCGTGAAGATTTGAAATCAAACTTGACTGGTCTTCTCACCATACTCGTCAACCATACTTTATATGCTGTTGTTGATAATCATTCTTACCTTGACAATCAAATACAAAGTGGACATTTAGGGAGCCGAACACGTCAGGTTTTTGTTGGGTGCTTGGATGATTATCAAATGATCCAAAATTCTCTAAACTATGTATTGACGGAAAAACTATTGAAGGAACATAATTCAGATTTGAATTTGGATTTGTCACAAATTGCTAGTTATTTAACTACTTGTGAGGATGATTTTGTGGAGTTTACACCCGAGCCCCCGATTTGGAAGTCTCGCTTTGATCATGTGTCGTCATTCATGATACTCTTATTCGACATGACAAATCTCAGCCAATGTGGTCGTGTTACACCGAGTAGTAGCTCCTCCATAGTTGTCCAAGAGACATCGTTACTTGATCCTTGCTTGACTAGATCTCCAGTGACACCGTTACGTTCAGCCAATGTTGTTGTAGATGAGAAGACGAAGGTGGCGAATGATTTTGTCCGAGATACATGCAACAAAACTGATTTTAAAGAGGTTTGCATTTCTGTGATCAATTCAGATGTTCATGAAGATTTGAAATCAAACTTGACTGGTCTTCTCACCCTATTCGTCAACCATTCTTTATATGCCGTTATTGATAATCATTCTTACCTTGATAACCAAATAAAAAGTGGACATTTAGGGGATCGAACACGTCAGGTCTTTGTTGGGTGCTTGGATGACTATCGAATGAGCAAGAATTCTTTAGGCTATATGTTGACGGAAAAACTGTTGAAGGAACATAATTCAGATTTGAATTTGGATTTGTCAGGAATTGCAAGCTACTTAACTACTTGTGAGGATGATTTTGTGGGGTTTACACCTGAGCCCTCAGTTTGGAAGTCCCGCTTTGATTATGCGTCTACGTTAGTGATACTTGCATTGGACATGACAAATCTCAACAAATGTGGTCACATTGATCAACCTGTTTGTTAG

Protein sequence

MNQLHVLVFIILFTCSVAANVIDPKTELANDFIRDTCNKFELKELCITVINSDVREDLKSNLTGLLTILVNHTLYAVVDNHSYLDNQIQSGHLGSRTRQVFVGCLDDYQMIQNSLNYVLTEKLLKEHNSDLNLDLSQIASYLTTCEDDFVEFTPEPPIWKSRFDHVSSFMILLFDMTNLSQCGRVTPSSSSSIVVQETSLLDPCLTRSPVTPLRSANVVVDEKTKVANDFVRDTCNKTDFKEVCISVINSDVHEDLKSNLTGLLTLFVNHSLYAVIDNHSYLDNQIKSGHLGDRTRQVFVGCLDDYRMSKNSLGYMLTEKLLKEHNSDLNLDLSGIASYLTTCEDDFVGFTPEPSVWKSRFDYASTLVILALDMTNLNKCGHIDQPVC

Homology

[Close]

BLAST of MS026372.1 vs. NCBI nr
Match: KAG6599042.1 (hypothetical protein SDJN03_08820, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191.0 bits (484), Expect = 1.9e-44
Identity = 99/187 (52.94%), Postives = 134/187 (71.66%), Query Frame = 0


Query: 1   MNQ-LHVLVFIILFTCSVAANVIDPKTELANDFIRDTCNKF-ELKELCITVINSDVREDL 60
           MNQ + V+V + +    VAAN++D + E+ANDF+ DTCNK  ELK+LC +VI SD R+DL
Sbjct: 1   MNQSIVVVVLVSVLVSFVAANILDLEMEVANDFVHDTCNKTEELKDLCNSVIGSDPRDDL 60

Query: 61  KSNLTGLLTILVNHTLYAVVDNHSYLDNQIQSGHLGSRTRQVFVGCLDDYQMIQNSLNYV 120
           K+NLT LLTI +N TL  VVD+HSYL NQ  +G L +RT +VF  C++ YQM ++SL  +
Sbjct: 61  KTNLTSLLTIFINQTLRVVVDDHSYLYNQTLNGELDNRTLEVFKSCMNLYQMSKDSLQAL 120

Query: 121 LTEKLLKEHNSDLNLDLSQIASYLTTCEDDFVEFTPEPPIWKSRFDHVSSFMILLFDMTN 180
           L  +LLK  N+DLN+DL+Q+ ++L  CE DF  FTPE   WKSR+D+VSS +IL   MTN
Sbjct: 121 LDVELLKNKNADLNMDLAQVDNFLDLCEVDFEGFTPESLTWKSRYDYVSSLLILSLRMTN 180

Query: 181 LSQCGRV 186
           L +C  +
Sbjct: 181 LIKCNHI 187

[Close]

BLAST of MS026372.1 vs. NCBI nr
Match: KAG6585821.1 (hypothetical protein SDJN03_18554, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188.0 bits (476), Expect = 1.6e-43
Identity = 92/172 (53.49%), Postives = 124/172 (72.09%), Query Frame = 0


Query: 213 LRSANVVVDEKTKVANDFVRDTCNKT-DFKEVCISVINSDVHEDLKSNLTGLLTLFVNHS 272
           L +A   +D + K  +DF R TC++T + K++CISVINS+  EDLKSNLTG L +F+N +
Sbjct: 14  LSAAANTLDPEMKAGSDFTRATCDRTSELKDLCISVINSNPCEDLKSNLTGFLAIFINET 73

Query: 273 LYAVIDNHSYLDNQIKSGHLGDRTRQVFVGCLDDYRMSKNSLGYMLTEKLLKEHNSDLNL 332
           L+ VID+HSYL NQ  +G L +RT QVF  C   Y+MSK+SL  +L ++LLK+HN+DLN+
Sbjct: 74  LHVVIDDHSYLLNQTLNGQLDNRTLQVFRSCASQYQMSKDSLRVLLEDELLKQHNADLNM 133

Query: 333 DLSGIASYLTTCEDDFVGFTPEPSVWKSRFDYASTLVILALDMTNLNKCGHI 384
           DL  I +YL  CE +F GF  EPS WK+R+DY S+L+IL+L  TNL KC  I
Sbjct: 134 DLGQIDNYLALCEMEFEGFIEEPSAWKTRYDYVSSLLILSLQTTNLIKCNRI 185

[Close]

BLAST of MS026372.1 vs. NCBI nr
Match: KAG6599036.1 (hypothetical protein SDJN03_08814, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 179.9 bits (455), Expect = 4.3e-41
Identity = 85/160 (53.12%), Postives = 115/160 (71.88%), Query Frame = 0


Query: 225 KVANDFVRDTCNKT-DFKEVCISVINSDVHEDLKSNLTGLLTLFVNHSLYAVIDNHSYLD 284
           K  NDF++DTCN+T DFK++CISVI+SD  EDLK N    L +F+N +L  +ID+HSYL 
Sbjct: 2   KAPNDFIQDTCNRTEDFKDLCISVIDSDPREDLKLNSMDFLVIFINRTLQVIIDDHSYLL 61

Query: 285 NQIKSGHLGDRTRQVFVGCLDDYRMSKNSLGYMLTEKLLKEHNSDLNLDLSGIASYLTTC 344
           NQ  +  L +RTR +F+GC+  Y+MSK+SL  +L E+LLK+ N+DLN+ L  I  YL  C
Sbjct: 62  NQTLNEELDNRTRHIFMGCMTLYQMSKDSLRVLLNEELLKQPNADLNMKLQQIEGYLDLC 121

Query: 345 EDDFVGFTPEPSVWKSRFDYASTLVILALDMTNLNKCGHI 384
           ++DF GFTP PS W SR+DY  +L+IL+  M NL KC +I
Sbjct: 122 QNDFEGFTPTPSTWTSRYDYVISLLILSFRMMNLIKCNYI 161

[Close]

BLAST of MS026372.1 vs. NCBI nr
Match: XP_022137307.1 (uncharacterized protein LOC111008804 [Momordica charantia])

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-22
Identity = 67/163 (41.10%), Postives = 91/163 (55.83%), Query Frame = 0


Query: 25  KTELANDFIRDTCNKFELK--ELCITVINSDVREDLKSNLTGLLTILVNHTLYAVVDNHS 84
           K  +AN F+ +TCNKFE +  ++CI VI+SD  +DLK NL+GLL I +NH++    DNH 
Sbjct: 6   KLSVANSFVNNTCNKFEEEFIKVCIDVIDSDPHQDLKLNLSGLLAIFINHSIDNATDNHL 65

Query: 85  YLDNQIQSGHLGSRTRQVFVGCLDDYQMIQNSLNYVLTEKLLKEHNSDLNLDLSQIASYL 144
           YL  Q++   L    R  F  C++ Y+   + L   L E LLK    DL L LS     +
Sbjct: 66  YLMEQLKRSDLDKDIRYTFNVCVEQYERGLDILKSSL-EALLKNDKDDLGLILSDAFDKI 125

Query: 145 TTCEDDFVEFTPEPPIWKSRFDHVSSFMILLFDMTNLSQCGRV 186
             CEDDF E TPEPP W + +  +   + L     NL QC +V
Sbjct: 126 VACEDDF-ESTPEPPSWLAHYLPLRKLLALSMGTANLIQCKKV 166

[Close]

BLAST of MS026372.1 vs. NCBI nr
Match: KAG6572152.1 (Expansin-like A2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117.9 bits (294), Expect = 2.0e-22
Identity = 64/167 (38.32%), Postives = 98/167 (58.68%), Query Frame = 0


Query: 218 VVVDEKTKVANDFVRDTCNKTDFKE---VCISVINSDVHEDLKSNLTGLLTLFVNHSLYA 277
           VV +      N+F  DTCN+  F++   +CI  ++S+  EDLKSNLTG+L +FVNH++  
Sbjct: 143 VVAEVNRSTNNNFAHDTCNRFQFEQLYKLCIPEVDSEPREDLKSNLTGILIIFVNHTISN 202

Query: 278 VIDNHSYLDNQIKSGHLGDRTRQVFVGCLDDYRMSKNSLGYMLTEKLLKEHNSDL-NLDL 337
             DN  +L  +IKSG L  +T++++  CL+++      L   +   LL E   D+  L  
Sbjct: 203 FKDNVMFLQREIKSGKLNGKTKEMYDTCLENFERGTTDLQQSM-HVLLTETGKDIYGLPA 262

Query: 338 SGIASYLTTCEDDFVGFTPEPSVWKSRFDYASTLVILALDMTNLNKC 381
             +ASY+T C DDF G  P+P  W+SR++ ++ L+ L L   NL KC
Sbjct: 263 LSVASYVTECVDDFEG-VPKPPEWQSRYNTSNKLLELILGTCNLMKC 307

[Close]

BLAST of MS026372.1 vs. ExPASy TrEMBL
Match: A0A6J1C7W5 (uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008804 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 7.4e-23
Identity = 67/163 (41.10%), Postives = 91/163 (55.83%), Query Frame = 0


Query: 25  KTELANDFIRDTCNKFELK--ELCITVINSDVREDLKSNLTGLLTILVNHTLYAVVDNHS 84
           K  +AN F+ +TCNKFE +  ++CI VI+SD  +DLK NL+GLL I +NH++    DNH 
Sbjct: 6   KLSVANSFVNNTCNKFEEEFIKVCIDVIDSDPHQDLKLNLSGLLAIFINHSIDNATDNHL 65

Query: 85  YLDNQIQSGHLGSRTRQVFVGCLDDYQMIQNSLNYVLTEKLLKEHNSDLNLDLSQIASYL 144
           YL  Q++   L    R  F  C++ Y+   + L   L E LLK    DL L LS     +
Sbjct: 66  YLMEQLKRSDLDKDIRYTFNVCVEQYERGLDILKSSL-EALLKNDKDDLGLILSDAFDKI 125

Query: 145 TTCEDDFVEFTPEPPIWKSRFDHVSSFMILLFDMTNLSQCGRV 186
             CEDDF E TPEPP W + +  +   + L     NL QC +V
Sbjct: 126 VACEDDF-ESTPEPPSWLAHYLPLRKLLALSMGTANLIQCKKV 166

[Close]

BLAST of MS026372.1 vs. ExPASy TrEMBL
Match: A0A5D3BJB5 (Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004170 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-17
Identity = 57/161 (35.40%), Postives = 91/161 (56.52%), Query Frame = 0


Query: 221 DEKTKVANDFVRDTCNKT-DFKEVCISVINSDVHEDLKSNLTGLLTLFVNHSLYAVIDNH 280
           D+ T + NDFVR TCN+T + K +C+S I+S+   DLKSNLTGLL +FVN S+    ++ 
Sbjct: 23  DQNTTI-NDFVRHTCNRTHELKNLCLSQISSEPRNDLKSNLTGLLMIFVNQSISNFKNDI 82

Query: 281 SYLDNQIKSGHLGDRTRQVFVGCLDDYRMSKNSLGYMLTEKLLKEHNSDLNLDLSGIASY 340
           S+L+ +I S  +   T+ +   CL ++++   +L   +     K       L +  + + 
Sbjct: 83  SFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQTKTGYDAEQLPVGNVGNL 142

Query: 341 LTTCEDDFVGFTPEPSVWKSRFDYASTLVILALDMTNLNKC 381
              C DDF G TP P  W+SR++ +  L+ L++ M NL  C
Sbjct: 143 AVECFDDFEG-TPVPPEWQSRYNASFALLKLSMAMINLITC 181

[Close]

BLAST of MS026372.1 vs. ExPASy TrEMBL
Match: A0A0K9RZS3 (PMEI domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_015950 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.1e-05
Identity = 36/137 (26.28%), Postives = 70/137 (51.09%), Query Frame = 0


Query: 218 VVVDEKTKVA---NDFVRDTCNKTDFKEVCISVINSDVHEDLKSNLTGLLTLFVNHSLYA 277
           + ++ + KV    +DF++ TC  T + +VCIS + S       S+L GL T+ VN  +  
Sbjct: 15  IFINNRIKVVKGDDDFIKKTCKNTQYSDVCISSLKS-YPSSSNSDLKGLATIMVNVGMVN 74

Query: 278 VIDNHSYLDNQ---IKSGHLGDRTRQVFVGCLDDYRMSKNSLGYMLTEKLLKEHNSD-LN 337
             + ++YL +Q   I S +     ++++  C  +Y  + +SL   L E  L++++ D  +
Sbjct: 75  ASETYAYLSSQSQVISSRNRDTSLKKLYQLCASEYSYANDSLKSSLHELSLEDYDYDYAS 134

Query: 338 LDLSGIASYLTTCEDDF 348
           + + G + Y   C + F
Sbjct: 135 IHVMGASDYSNACHNAF 150

[Close]

BLAST of MS026372.1 vs. ExPASy TrEMBL
Match: A0A2G5EZW5 (PMEI domain-containing protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00300672v1 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.7e-04
Identity = 48/167 (28.74%), Postives = 81/167 (48.50%), Query Frame = 0


Query: 213 LRSANVVVDEKTKVANDFVRDTCNKTDFKEVCISVINSDVHEDLKSNLTGLLTLFVNHSL 272
           L +  VVV  K   A D +  TC K+ +K++C+ V+NSD     +++L GL  + +NH+ 
Sbjct: 30  LAANTVVVPPK---ATDLITQTCEKSTYKDLCVQVLNSD-PTSKQADLMGLAKIIMNHAA 89

Query: 273 YAVIDNHSYLDNQIKSGHLGDRTRQ-VFVGCLDDYRMSKNSLGYMLTEKLLKEHNSDLNL 332
               +   ++D ++ SG+  DR+ Q     C + Y  + + L   +     K++ SD+  
Sbjct: 90  DIASNITGHID-KLLSGNAADRSIQDCLTDCDEFYTDASDQLEDSIAALDTKDY-SDIKK 149

Query: 333 DLSGIASYLTTCEDDFVG-FTPEPSVWKSRFDYASTLVILALDMTNL 378
            L    + + +CE  F        SV  S  D  S    +ALDMT+L
Sbjct: 150 WLEAAIADVDSCEGAFKDQNASRKSVLASENDNFSQFCHIALDMTSL 190

The following BLAST results are available for this feature:

BLAST of MS026372.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599042.1	1.9e-44	52.94	hypothetical protein SDJN03_08820, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6585821.1	1.6e-43	53.49	hypothetical protein SDJN03_18554, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6599036.1	4.3e-41	53.13	hypothetical protein SDJN03_08814, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022137307.1	1.5e-22	41.10	uncharacterized protein LOC111008804 [Momordica charantia]	[more]
KAG6572152.1	2.0e-22	38.32	Expansin-like A2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MS026372.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS026372.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C7W5	7.4e-23	41.10	uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A5D3BJB5	1.2e-17	35.40	Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0K9RZS3	9.1e-05	26.28	PMEI domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_015950 PE=4 ...	[more]
A0A2G5EZW5	2.7e-04	28.74	PMEI domain-containing protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00300672...	[more]

BLAST of MS026372.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006501	Pectinesterase inhibitor domain	SMART	SM00856	PMEI_2	coord: 226..374 e-value: 3.3E-12 score: 56.6 coord: 28..176 e-value: 2.0E-9 score: 47.3
IPR006501	Pectinesterase inhibitor domain	TIGRFAM	TIGR01614	TIGR01614	coord: 218..356 e-value: 1.2E-13 score: 48.8 coord: 4..169 e-value: 5.6E-18 score: 62.9
IPR006501	Pectinesterase inhibitor domain	PFAM	PF04043	PMEI	coord: 229..353 e-value: 1.0E-12 score: 48.6 coord: 31..152 e-value: 1.2E-11 score: 45.1
IPR035513	Invertase/pectin methylesterase inhibitor domain superfamily	GENE3D	1.20.140.40	Invertase/pectin methylesterase inhibitor family protein	coord: 28..180 e-value: 1.3E-16 score: 62.9 coord: 226..378 e-value: 1.7E-19 score: 72.3
IPR035513	Invertase/pectin methylesterase inhibitor domain superfamily	SUPERFAMILY	101148	Plant invertase/pectin methylesterase inhibitor	coord: 30..171
IPR035513	Invertase/pectin methylesterase inhibitor domain superfamily	SUPERFAMILY	101148	Plant invertase/pectin methylesterase inhibitor	coord: 228..377
None	No IPR available	PANTHER	PTHR31080:SF152	CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2	coord: 217..351
None	No IPR available	PANTHER	PTHR31080:SF152	CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2	coord: 20..153
None	No IPR available	PANTHER	PTHR31080	PECTINESTERASE INHIBITOR-LIKE	coord: 20..153 coord: 217..351

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS026372	MS026372	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS026372.1-cds	MS026372.1-cds-scaffold459:842413..842936	CDS
MS026372.1-cds	MS026372.1-cds-scaffold459:845819..845900	CDS
MS026372.1-cds	MS026372.1-cds-scaffold459:847829..848389	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS026372.1	MS026372.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004857	enzyme inhibitor activity