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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. GTTGAACAGACAGCTCGCGACCCGAAAGAGAATCCAGTCTTTCTTCGTCGTGAATATCTGAATAGAACGAACCGCCCCGTGGTTTGCTTCGGAACAAAACAATTAGAATTAGGCTCGGTCAACTGGAATGTGTATTATCCATATAGGGGA mRNA sequence GTTGAACAGACAGCTCGCGACCCGAAAGAGAATCCAGTCTTTCTTCGTCGTGAATATCTGAATAGAACGAACCGCCCCGTGGTTTGCTTCGGAACAAAACAATTAGAATTAGGCTCGGTCAACTGGAATGTGTATTATCCATATAGGGGA Coding sequence (CDS) GTTGAACAGACAGCTCGCGACCCGAAAGAGAATCCAGTCTTTCTTCGTCGTGAATATCTGAATAGAACGAACCGCCCCGTGGTTTGCTTCGGAACAAAACAATTAGAATTAGGCTCGGTCAACTGGAATGTGTATTATCCATATAGGGGA Protein sequence VEQTARDPKENPVFLRREYLNRTNRPVVCFGTKQLELGSVNWNVYYPYRG
Homology
BLAST of MS023017.1 vs. NCBI nr
Match: QIB71948.1 (hypothetical protein [Fagonia indica]) HSP 1 Score: 76.6 bits (187), Expect = 6.6e-11 Identity = 36/51 (70.59%), Postives = 39/51 (76.47%), Query Frame = 0
Query: 3 QTARDPKENPVFLRREYLNRTNRPV---VCFGTKQLELGSVNWNVYYPYRG 51
Q + +EN V + REYLNRTN PV VCF TKQLELGSVNWNVYYPYRG
Sbjct: 35 QDLSEKRENSVLIGREYLNRTNHPVDLFVCFRTKQLELGSVNWNVYYPYRG 85
BLAST of MS023017.1 vs. ExPASy TrEMBL
Match: A0A0A0LBC9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G600000 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.1e-16 Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 0
Query: 8 PKENPVFLRREYLNRTNRPVVCFGTKQLELGSVNWNVYYPYRG 51
PKENPVFL REYLNRTNRPVVCFGTKQLELGS+NWNVYYPYRG
Sbjct: 10 PKENPVFLGREYLNRTNRPVVCFGTKQLELGSLNWNVYYPYRG 52
BLAST of MS023017.1 vs. ExPASy TrEMBL
Match: A0A6C0UA12 (Uncharacterized protein OS=Fagonia indica OX=66629 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 3.2e-11 Identity = 36/51 (70.59%), Postives = 39/51 (76.47%), Query Frame = 0
Query: 3 QTARDPKENPVFLRREYLNRTNRPV---VCFGTKQLELGSVNWNVYYPYRG 51
Q + +EN V + REYLNRTN PV VCF TKQLELGSVNWNVYYPYRG
Sbjct: 35 QDLSEKRENSVLIGREYLNRTNHPVDLFVCFRTKQLELGSVNWNVYYPYRG 85
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| QIB71948.1 | 6.6e-11 | 70.59 | hypothetical protein [Fagonia indica] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LBC9 | 1.1e-16 | 95.35 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G600000 PE=4 SV=1 | [more] |
| A0A6C0UA12 | 3.2e-11 | 70.59 | Uncharacterized protein OS=Fagonia indica OX=66629 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| MS023017 | MS023017 | gene |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MS023017.1-cds | MS023017.1-cds-scaffold357:606815..606964 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MS023017.1 | MS023017.1-protein | polypeptide |
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