MS022221.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS022221.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Arabidopsis protein of unknown function (DUF241)
Location	scaffold47: 1794840 .. 1795715 (-)
Sequence length	876
RNA-Seq Expression	MS022221.1
Synteny	MS022221.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCCTCTGCTTTGAACCCAAGAATCTCTCACCATGTTCGTTCAAACAGCTTGCCCTCAAAGCCACACCCACTCATCAACCAAGTTGATGAGCAATTGGTCAGATTAAGGGATTCGGAAGCCACATCTTCTTCATCTTCATCTCTATGCCATAGACTCGGTGCCCTTCAAGATTTGCACGACTGCATCGATAAGTTGCTTCTTTTGCCTCTCTCCCAACAAGCTCTTATCCAATTGAGTGATAAGGAACTGCTAGATGACTTACTAGAAGGATCTCTCAGGCTTTTAGATTCGTGTGACATAGCAATGAATGCCCTGTTGCAAACCAGAGAATGCACAAATGAATTAGAGTCCTTTTTACGTCGAAGAAGAGGTGAAATTGGTACTGCTAGTTCACTTCAGGAATGTTTAAGTTCCAGGAAGATGATAAAGAAAGCAATCCACAAAGCCTTGAAGGGAATGGAAAGCAAGCAATCCCACAAAGATCATGGAAGTTTGACTATTGTCAACTTGGTAAAAGAGGTTGAAGCAGTGACATACCACAGCATAGAATCTTTGCTGTCCTTTATAGCAGGACCAAAGATGCCATCAAAATGGAGCTGCTGGTCTTCAGTTTCCAAGTTTGTGCAACCGAAAAGAGTAGCCTGCATAAGCGAAGAAACAAACATAAGTGTAGTAGAAAGATTGGATTTGACATTAAGTTCAATTACCAACCACCATACTAACAAATCAAAATCCCTTATTCAAGTTGAAGACATGCAGAACTCGCTGAGGGAATGTGGGACAAGCATTAAGGAAGTTGAAGAAGAACTTGAAAATCTTTACAGGTTCATCATCAAAACTAGAGTGTCCCTTCTCAATATCTTCAACCAC

mRNA sequence

ATGGATGCCTCTGCTTTGAACCCAAGAATCTCTCACCATGTTCGTTCAAACAGCTTGCCCTCAAAGCCACACCCACTCATCAACCAAGTTGATGAGCAATTGGTCAGATTAAGGGATTCGGAAGCCACATCTTCTTCATCTTCATCTCTATGCCATAGACTCGGTGCCCTTCAAGATTTGCACGACTGCATCGATAAGTTGCTTCTTTTGCCTCTCTCCCAACAAGCTCTTATCCAATTGAGTGATAAGGAACTGCTAGATGACTTACTAGAAGGATCTCTCAGGCTTTTAGATTCGTGTGACATAGCAATGAATGCCCTGTTGCAAACCAGAGAATGCACAAATGAATTAGAGTCCTTTTTACGTCGAAGAAGAGGTGAAATTGGTACTGCTAGTTCACTTCAGGAATGTTTAAGTTCCAGGAAGATGATAAAGAAAGCAATCCACAAAGCCTTGAAGGGAATGGAAAGCAAGCAATCCCACAAAGATCATGGAAGTTTGACTATTGTCAACTTGGTAAAAGAGGTTGAAGCAGTGACATACCACAGCATAGAATCTTTGCTGTCCTTTATAGCAGGACCAAAGATGCCATCAAAATGGAGCTGCTGGTCTTCAGTTTCCAAGTTTGTGCAACCGAAAAGAGTAGCCTGCATAAGCGAAGAAACAAACATAAGTGTAGTAGAAAGATTGGATTTGACATTAAGTTCAATTACCAACCACCATACTAACAAATCAAAATCCCTTATTCAAGTTGAAGACATGCAGAACTCGCTGAGGGAATGTGGGACAAGCATTAAGGAAGTTGAAGAAGAACTTGAAAATCTTTACAGGTTCATCATCAAAACTAGAGTGTCCCTTCTCAATATCTTCAACCAC

Coding sequence (CDS)

ATGGATGCCTCTGCTTTGAACCCAAGAATCTCTCACCATGTTCGTTCAAACAGCTTGCCCTCAAAGCCACACCCACTCATCAACCAAGTTGATGAGCAATTGGTCAGATTAAGGGATTCGGAAGCCACATCTTCTTCATCTTCATCTCTATGCCATAGACTCGGTGCCCTTCAAGATTTGCACGACTGCATCGATAAGTTGCTTCTTTTGCCTCTCTCCCAACAAGCTCTTATCCAATTGAGTGATAAGGAACTGCTAGATGACTTACTAGAAGGATCTCTCAGGCTTTTAGATTCGTGTGACATAGCAATGAATGCCCTGTTGCAAACCAGAGAATGCACAAATGAATTAGAGTCCTTTTTACGTCGAAGAAGAGGTGAAATTGGTACTGCTAGTTCACTTCAGGAATGTTTAAGTTCCAGGAAGATGATAAAGAAAGCAATCCACAAAGCCTTGAAGGGAATGGAAAGCAAGCAATCCCACAAAGATCATGGAAGTTTGACTATTGTCAACTTGGTAAAAGAGGTTGAAGCAGTGACATACCACAGCATAGAATCTTTGCTGTCCTTTATAGCAGGACCAAAGATGCCATCAAAATGGAGCTGCTGGTCTTCAGTTTCCAAGTTTGTGCAACCGAAAAGAGTAGCCTGCATAAGCGAAGAAACAAACATAAGTGTAGTAGAAAGATTGGATTTGACATTAAGTTCAATTACCAACCACCATACTAACAAATCAAAATCCCTTATTCAAGTTGAAGACATGCAGAACTCGCTGAGGGAATGTGGGACAAGCATTAAGGAAGTTGAAGAAGAACTTGAAAATCTTTACAGGTTCATCATCAAAACTAGAGTGTCCCTTCTCAATATCTTCAACCAC

Protein sequence

MDASALNPRISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDLHDCIDKLLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESFLRRRRGEIGTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVTYHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNHHTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH

Homology

[Close]

BLAST of MS022221.1 vs. NCBI nr
Match: XP_022136177.1 (uncharacterized protein LOC111007932 [Momordica charantia])

HSP 1 Score: 556.6 bits (1433), Expect = 1.3e-154
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0


Query: 1   MDASALNPRISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDL 60
           MDASALNPRISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDL
Sbjct: 1   MDASALNPRISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDL 60

Query: 61  HDCIDKLLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESF 120
           HDCIDKLLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESF
Sbjct: 61  HDCIDKLLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESF 120

Query: 121 LRRRRGEIGTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVT 180
           LRRRRGEIGTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVT
Sbjct: 121 LRRRRGEIGTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVT 180

Query: 181 YHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNH 240
           YHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNH
Sbjct: 181 YHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNH 240

Query: 241 HTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH 293
           HTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH
Sbjct: 241 HTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH 292

[Close]

BLAST of MS022221.1 vs. NCBI nr
Match: XP_038887200.1 (uncharacterized protein LOC120077387 [Benincasa hispida])

HSP 1 Score: 422.5 bits (1085), Expect = 2.9e-114
Identity = 228/292 (78.08%), Postives = 254/292 (86.99%), Query Frame = 0


Query: 1   MDASALNPRISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDL 60
           MDASALN R S HVRS S PS PHP+I+QVDEQL RL DSEA SS SSSLCH+L ALQDL
Sbjct: 1   MDASALNRRNSQHVRSKSEPSNPHPIISQVDEQLRRLMDSEAISSPSSSLCHKLVALQDL 60

Query: 61  HDCIDKLLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESF 120
           HD +  LL+LPLSQQAL+Q+SDK++L+DLLEGSLRLLD CD A NALLQTRECT+ELES 
Sbjct: 61  HDSV--LLILPLSQQALVQVSDKKVLNDLLEGSLRLLDLCDTAKNALLQTRECTHELESV 120

Query: 121 LRRRRGEIGTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVT 180
           LRRRR EIGT+SSL++CLSSRKMIKKAIH+ LKGMESKQ +KD+GS   VN +KEVEAVT
Sbjct: 121 LRRRRSEIGTSSSLKKCLSSRKMIKKAIHEVLKGMESKQFNKDNGSFYFVNQIKEVEAVT 180

Query: 181 YHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNH 240
           YHSI SLLSFIAGPK+P+KW CWSSVSK VQ K+VAC+SEETNISVVERLDLTLSSITNH
Sbjct: 181 YHSIVSLLSFIAGPKLPAKWRCWSSVSKLVQSKKVACVSEETNISVVERLDLTLSSITNH 240

Query: 241 HTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH 293
            T+K    IQVEDMQ  LR+CG SIKE+EEELE LYRFIIKTRVSLLNIFN+
Sbjct: 241 QTDKDFQ-IQVEDMQKLLRDCGASIKEIEEELEGLYRFIIKTRVSLLNIFNY 289

[Close]

BLAST of MS022221.1 vs. NCBI nr
Match: XP_004144945.1 (uncharacterized protein LOC101212326 [Cucumis sativus] >KGN43323.1 hypothetical protein Csa_020213 [Cucumis sativus])

HSP 1 Score: 416.8 bits (1070), Expect = 1.6e-112
Identity = 221/292 (75.68%), Postives = 251/292 (85.96%), Query Frame = 0


Query: 1   MDASALNPRISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDL 60
           MDAS LN R S HVRS S+PS PHP+I+QVDEQL RLRDSEA SSSSSSLCH+L ALQDL
Sbjct: 1   MDASTLNQRNSQHVRSKSVPSNPHPIISQVDEQLSRLRDSEAISSSSSSLCHKLSALQDL 60

Query: 61  HDCIDKLLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESF 120
           HD +DKLL+LPLSQQAL+Q+SDKE LD+LLEGSLRLLD CD A  AL+QTRECT+E ES 
Sbjct: 61  HDSVDKLLILPLSQQALVQVSDKEELDNLLEGSLRLLDLCDTAKKALMQTRECTHEFESV 120

Query: 121 LRRRRGEIGTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVT 180
           LRRRR +IGT+SSL++CLSSRK+IKKAIHK LKGMESKQ++KD  S T VN +KEVEAVT
Sbjct: 121 LRRRRSDIGTSSSLKKCLSSRKLIKKAIHKVLKGMESKQTNKDSESFTFVNQIKEVEAVT 180

Query: 181 YHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNH 240
           Y SI SLL FIAGPK+P+KW+CWSSVSK VQ K+VACISEET+IS+VERLDL LSSITNH
Sbjct: 181 YQSIVSLLFFIAGPKLPAKWNCWSSVSKLVQSKKVACISEETSISIVERLDLALSSITNH 240

Query: 241 HTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH 293
            ++K    I V DMQN LR+CG SIK+VEEELE LYRFIIK RVSLLNIFN+
Sbjct: 241 QSDKDFQ-IHVGDMQNLLRDCGASIKKVEEELEGLYRFIIKIRVSLLNIFNY 291

[Close]

BLAST of MS022221.1 vs. NCBI nr
Match: XP_008447871.1 (PREDICTED: uncharacterized protein LOC103490224 [Cucumis melo] >TYK23300.1 uncharacterized protein E5676_scaffold142G003580 [Cucumis melo var. makuwa])

HSP 1 Score: 412.1 bits (1058), Expect = 3.9e-111
Identity = 220/292 (75.34%), Postives = 248/292 (84.93%), Query Frame = 0


Query: 1   MDASALNPRISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDL 60
           MDAS LN R S HVRS S+PS PHP+I+QVDEQL RLRDSEA SSSSSSLCH+L ALQDL
Sbjct: 1   MDASTLNRRNSQHVRSKSVPSNPHPIISQVDEQLSRLRDSEAISSSSSSLCHKLSALQDL 60

Query: 61  HDCIDKLLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESF 120
           HD +DKLL+LPLSQQAL+ +SDKE LD+LLEGSLRLLD CD A  AL+QTRECT+E ES 
Sbjct: 61  HDSVDKLLILPLSQQALVPVSDKEELDNLLEGSLRLLDLCDTAKKALMQTRECTHEFESV 120

Query: 121 LRRRRGEIGTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVT 180
           LRRRR EIGT+SSL++CLSSRKM+KKAIHK LKGMESKQS+KD  S T VN +KEVEAVT
Sbjct: 121 LRRRRSEIGTSSSLKKCLSSRKMVKKAIHKVLKGMESKQSNKDSESFTFVNQIKEVEAVT 180

Query: 181 YHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNH 240
             SI SLL FIAGPK+P+KW CWSSVSK VQ K+VACISEET+IS+VERLDL LSS++NH
Sbjct: 181 SQSIVSLLFFIAGPKLPAKWICWSSVSKLVQSKKVACISEETSISIVERLDLALSSVSNH 240

Query: 241 HTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH 293
            ++K    I V DMQN LR+CG SIKEVEEELE LYR IIKTRVSLLNIFN+
Sbjct: 241 QSDKD-CQIHVGDMQNLLRDCGASIKEVEEELEGLYRLIIKTRVSLLNIFNY 291

[Close]

BLAST of MS022221.1 vs. NCBI nr
Match: XP_038888978.1 (uncharacterized protein LOC120078742 [Benincasa hispida])

HSP 1 Score: 405.6 bits (1041), Expect = 3.6e-109
Identity = 224/292 (76.71%), Postives = 244/292 (83.56%), Query Frame = 0


Query: 1   MDASALNPRISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDL 60
           MD S LNPR S HVRS S PS PHP+I+QVDEQL RLRDSEAT   SSSLCHRLGALQDL
Sbjct: 1   MDTSTLNPRNSQHVRSKSEPSNPHPIISQVDEQLRRLRDSEAT---SSSLCHRLGALQDL 60

Query: 61  HDCIDKLLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESF 120
           +DC+DKLL LP SQQAL Q +DKE+LDDLLEGSL LLD CD A N LLQTRECT+ELES 
Sbjct: 61  YDCVDKLLGLPNSQQALAQGTDKEVLDDLLEGSLMLLDLCDTAKNGLLQTRECTHELESI 120

Query: 121 LRRRRGEIGTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVT 180
           LRR+RGEI T+SSLQ+   SRKMIKK IHKALKGME +   K +GSLTIVNL+KEVEA T
Sbjct: 121 LRRKRGEICTSSSLQK---SRKMIKKTIHKALKGMEGEHFRKVYGSLTIVNLIKEVEATT 180

Query: 181 YHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNH 240
           Y S+ SLLSFIAGPK+PSKWSCWSSVS FVQP+RVACISEET++SVVERLDL L S TNH
Sbjct: 181 YDSMASLLSFIAGPKLPSKWSCWSSVSNFVQPRRVACISEETDVSVVERLDLALRSATNH 240

Query: 241 HTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH 293
            TNK +   Q EDMQN LRECG  IKEVEEELE LYRFIIKTRVSLLNIFN+
Sbjct: 241 QTNK-EFHTQDEDMQNLLRECGACIKEVEEELEGLYRFIIKTRVSLLNIFNN 285

[Close]

BLAST of MS022221.1 vs. ExPASy TrEMBL
Match: A0A6J1C4U7 (uncharacterized protein LOC111007932 OS=Momordica charantia OX=3673 GN=LOC111007932 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 6.2e-155
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0


Query: 1   MDASALNPRISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDL 60
           MDASALNPRISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDL
Sbjct: 1   MDASALNPRISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDL 60

Query: 61  HDCIDKLLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESF 120
           HDCIDKLLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESF
Sbjct: 61  HDCIDKLLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESF 120

Query: 121 LRRRRGEIGTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVT 180
           LRRRRGEIGTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVT
Sbjct: 121 LRRRRGEIGTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVT 180

Query: 181 YHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNH 240
           YHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNH
Sbjct: 181 YHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNH 240

Query: 241 HTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH 293
           HTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH
Sbjct: 241 HTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH 292

[Close]

BLAST of MS022221.1 vs. ExPASy TrEMBL
Match: A0A0A0K1I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G023970 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 7.6e-113
Identity = 221/292 (75.68%), Postives = 251/292 (85.96%), Query Frame = 0


Query: 1   MDASALNPRISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDL 60
           MDAS LN R S HVRS S+PS PHP+I+QVDEQL RLRDSEA SSSSSSLCH+L ALQDL
Sbjct: 1   MDASTLNQRNSQHVRSKSVPSNPHPIISQVDEQLSRLRDSEAISSSSSSLCHKLSALQDL 60

Query: 61  HDCIDKLLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESF 120
           HD +DKLL+LPLSQQAL+Q+SDKE LD+LLEGSLRLLD CD A  AL+QTRECT+E ES 
Sbjct: 61  HDSVDKLLILPLSQQALVQVSDKEELDNLLEGSLRLLDLCDTAKKALMQTRECTHEFESV 120

Query: 121 LRRRRGEIGTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVT 180
           LRRRR +IGT+SSL++CLSSRK+IKKAIHK LKGMESKQ++KD  S T VN +KEVEAVT
Sbjct: 121 LRRRRSDIGTSSSLKKCLSSRKLIKKAIHKVLKGMESKQTNKDSESFTFVNQIKEVEAVT 180

Query: 181 YHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNH 240
           Y SI SLL FIAGPK+P+KW+CWSSVSK VQ K+VACISEET+IS+VERLDL LSSITNH
Sbjct: 181 YQSIVSLLFFIAGPKLPAKWNCWSSVSKLVQSKKVACISEETSISIVERLDLALSSITNH 240

Query: 241 HTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH 293
            ++K    I V DMQN LR+CG SIK+VEEELE LYRFIIK RVSLLNIFN+
Sbjct: 241 QSDKDFQ-IHVGDMQNLLRDCGASIKKVEEELEGLYRFIIKIRVSLLNIFNY 291

[Close]

BLAST of MS022221.1 vs. ExPASy TrEMBL
Match: A0A5D3DIV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003580 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.9e-111
Identity = 220/292 (75.34%), Postives = 248/292 (84.93%), Query Frame = 0


Query: 1   MDASALNPRISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDL 60
           MDAS LN R S HVRS S+PS PHP+I+QVDEQL RLRDSEA SSSSSSLCH+L ALQDL
Sbjct: 1   MDASTLNRRNSQHVRSKSVPSNPHPIISQVDEQLSRLRDSEAISSSSSSLCHKLSALQDL 60

Query: 61  HDCIDKLLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESF 120
           HD +DKLL+LPLSQQAL+ +SDKE LD+LLEGSLRLLD CD A  AL+QTRECT+E ES 
Sbjct: 61  HDSVDKLLILPLSQQALVPVSDKEELDNLLEGSLRLLDLCDTAKKALMQTRECTHEFESV 120

Query: 121 LRRRRGEIGTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVT 180
           LRRRR EIGT+SSL++CLSSRKM+KKAIHK LKGMESKQS+KD  S T VN +KEVEAVT
Sbjct: 121 LRRRRSEIGTSSSLKKCLSSRKMVKKAIHKVLKGMESKQSNKDSESFTFVNQIKEVEAVT 180

Query: 181 YHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNH 240
             SI SLL FIAGPK+P+KW CWSSVSK VQ K+VACISEET+IS+VERLDL LSS++NH
Sbjct: 181 SQSIVSLLFFIAGPKLPAKWICWSSVSKLVQSKKVACISEETSISIVERLDLALSSVSNH 240

Query: 241 HTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH 293
            ++K    I V DMQN LR+CG SIKEVEEELE LYR IIKTRVSLLNIFN+
Sbjct: 241 QSDKD-CQIHVGDMQNLLRDCGASIKEVEEELEGLYRLIIKTRVSLLNIFNY 291

[Close]

BLAST of MS022221.1 vs. ExPASy TrEMBL
Match: A0A1S3BJ22 (uncharacterized protein LOC103490224 OS=Cucumis melo OX=3656 GN=LOC103490224 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.9e-111
Identity = 220/292 (75.34%), Postives = 248/292 (84.93%), Query Frame = 0


Query: 1   MDASALNPRISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDL 60
           MDAS LN R S HVRS S+PS PHP+I+QVDEQL RLRDSEA SSSSSSLCH+L ALQDL
Sbjct: 1   MDASTLNRRNSQHVRSKSVPSNPHPIISQVDEQLSRLRDSEAISSSSSSLCHKLSALQDL 60

Query: 61  HDCIDKLLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESF 120
           HD +DKLL+LPLSQQAL+ +SDKE LD+LLEGSLRLLD CD A  AL+QTRECT+E ES 
Sbjct: 61  HDSVDKLLILPLSQQALVPVSDKEELDNLLEGSLRLLDLCDTAKKALMQTRECTHEFESV 120

Query: 121 LRRRRGEIGTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVT 180
           LRRRR EIGT+SSL++CLSSRKM+KKAIHK LKGMESKQS+KD  S T VN +KEVEAVT
Sbjct: 121 LRRRRSEIGTSSSLKKCLSSRKMVKKAIHKVLKGMESKQSNKDSESFTFVNQIKEVEAVT 180

Query: 181 YHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNH 240
             SI SLL FIAGPK+P+KW CWSSVSK VQ K+VACISEET+IS+VERLDL LSS++NH
Sbjct: 181 SQSIVSLLFFIAGPKLPAKWICWSSVSKLVQSKKVACISEETSISIVERLDLALSSVSNH 240

Query: 241 HTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH 293
            ++K    I V DMQN LR+CG SIKEVEEELE LYR IIKTRVSLLNIFN+
Sbjct: 241 QSDKD-CQIHVGDMQNLLRDCGASIKEVEEELEGLYRLIIKTRVSLLNIFNY 291

[Close]

BLAST of MS022221.1 vs. ExPASy TrEMBL
Match: A0A0A0K659 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G023950 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 2.1e-107
Identity = 222/293 (75.77%), Postives = 246/293 (83.96%), Query Frame = 0


Query: 1   MDASALNPRISHHVRSNSLPSKPHPLINQVDEQLVRLR-DSEATSSSSSSLCHRLGALQD 60
           MDAS LNPR S HVRS S  S PHP+I+QV+EQL RLR DSEAT   SSSLCHRLGALQD
Sbjct: 1   MDASTLNPRNSQHVRSKSENSNPHPIISQVNEQLRRLRPDSEAT---SSSLCHRLGALQD 60

Query: 61  LHDCIDKLLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELES 120
           L+D +DKLL+LP SQ AL+Q S++E+ DDLLEGSL LLD CD A N LLQTREC +ELES
Sbjct: 61  LYDGVDKLLVLPNSQNALVQQSNEEVFDDLLEGSLMLLDLCDTAKNGLLQTRECIHELES 120

Query: 121 FLRRRRGEIGTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAV 180
            LRR+RGEI T+SSL +   SRKMIKK I KALKGME +  HK HGSLTIVNL+KEVEA+
Sbjct: 121 ILRRKRGEICTSSSLHK---SRKMIKKTIQKALKGMEGEPFHKVHGSLTIVNLIKEVEAI 180

Query: 181 TYHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITN 240
           TYHS+ESLLSFIAGPK+PSKWSCWSSVS  VQPKRVACISEET+ISVVERLDL LSS TN
Sbjct: 181 TYHSLESLLSFIAGPKLPSKWSCWSSVSMLVQPKRVACISEETDISVVERLDLALSSFTN 240

Query: 241 HHTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH 293
           H +NK +  IQ EDMQN LRECG SIKEVEEEL+ LYRFIIKTRVSLLNIFN+
Sbjct: 241 HQSNK-EFQIQDEDMQNLLRECGASIKEVEEELDGLYRFIIKTRVSLLNIFNN 286

[Close]

BLAST of MS022221.1 vs. TAIR 10
Match: AT2G17080.1 (Arabidopsis protein of unknown function (DUF241) )

HSP 1 Score: 182.6 bits (462), Expect = 4.6e-46
Identity = 118/284 (41.55%), Postives = 183/284 (64.44%), Query Frame = 0


Query: 10  ISHHVRSNSLPSKPHPLINQVDEQLVRLRDSE-ATSSSSSSLCHRLGALQDLHDCIDKLL 69
           +S HVRSNS PS+ HP    VDEQL RLR SE A+SSSSSS+C RL  LQ+LH+ +DKL+
Sbjct: 3   VSFHVRSNSFPSRSHPQAAHVDEQLARLRSSEQASSSSSSSICQRLDNLQELHESLDKLI 62

Query: 70  LLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESFLRRRRGEI 129
             P++QQAL Q  +K+ ++ LL+GSLR+LD C+I+ +AL + +E   E++S LRR+RG++
Sbjct: 63  SRPVTQQALSQEHNKKAVEQLLDGSLRILDLCNISKDALSEMKEGLMEIQSILRRKRGDL 122

Query: 130 GTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVTYHSIESLL 189
             +  +++ L+SRK +KK+  K  K ++  Q+ +D+   T+  +  E EA+T    +SLL
Sbjct: 123 --SEEVKKYLTSRKSLKKSFQKVQKSLKVTQA-EDNNDDTLA-VFGEAEAITLSLFDSLL 182

Query: 190 SFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNHHTNKSKSL 249
           S+++G K  SKWS    VSK +  K+V C ++E   + V+               +S+  
Sbjct: 183 SYMSGSKTCSKWSV---VSKLMNKKKVTCEAQENEFTKVD------------SEFQSEKT 242

Query: 250 IQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH 293
           ++++D+QN L  C   I+++E+ LE+L + +IK RVS LNI  H
Sbjct: 243 LKMDDVQN-LESC---IQDLEDGLESLSKSLIKYRVSFLNILGH 263

[Close]

BLAST of MS022221.1 vs. TAIR 10
Match: AT2G17070.1 (Arabidopsis protein of unknown function (DUF241) )

HSP 1 Score: 177.2 bits (448), Expect = 2.0e-44
Identity = 117/284 (41.20%), Postives = 176/284 (61.97%), Query Frame = 0


Query: 10  ISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATS-SSSSSLCHRLGALQDLHDCIDKLL 69
           +S HVRS+S PS PHP    VDEQL RLR SE TS SSSSS+C RL  LQ+LH+ +DKL+
Sbjct: 3   VSFHVRSHSYPSIPHPQAAHVDEQLARLRSSEETSTSSSSSICQRLDNLQELHESLDKLI 62

Query: 70  LLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESFLRRRRGEI 129
            LP++QQAL Q  +K+ ++ LL+GSL++LD C+I+ +AL Q +E   E++S LRR+RG++
Sbjct: 63  RLPVTQQALGQEKNKKDVEQLLDGSLKILDVCNISKDALSQMKEGLMEIQSILRRKRGDL 122

Query: 130 GTASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVTYHSIESLL 189
             +  +++ L+SRK  KK   K  K +++ Q+  +      V    E EAVT    +SL 
Sbjct: 123 --SGEVKKYLASRKSFKKTFQKVQKSLKAAQAEDNKDKSLAV--FGEAEAVTIAMFDSLF 182

Query: 190 SFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNHHTNKSKSL 249
           S+++G K  SKWS    VSK +  K++ C ++E   + V+               +S+  
Sbjct: 183 SYMSGSKTCSKWSV---VSKLMNKKKITCEAQENEFTKVD------------SEFQSEKT 242

Query: 250 IQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH 293
           +++ED+Q  L  C   I++ E+ LE+L + +IK RVS+LN F H
Sbjct: 243 LKMEDVQ-ILESC---IQDFEDGLESLSKSLIKYRVSILNSFGH 263

[Close]

BLAST of MS022221.1 vs. TAIR 10
Match: AT4G35200.1 (Arabidopsis protein of unknown function (DUF241) )

HSP 1 Score: 162.9 bits (411), Expect = 3.8e-40
Identity = 114/280 (40.71%), Postives = 174/280 (62.14%), Query Frame = 0


Query: 10  ISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDLHDCIDKLLL 69
           +S HVRSNS PS+ HP    VDEQL RLR S+  S+SSSS+C RL  LQDLHD ++K++ 
Sbjct: 3   VSFHVRSNSYPSRQHPQAAHVDEQLTRLRSSD--SASSSSICQRLSNLQDLHDSLEKMIR 62

Query: 70  LPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESFLRRRRGEIG 129
           L ++  AL Q    + ++ LL+GSLR+LD C+IA +A+ Q +E   E++S LRR+ G++ 
Sbjct: 63  LSVTNLALSQ----DQIEKLLDGSLRILDLCNIAKDAISQMKEGLMEIQSILRRKPGDL- 122

Query: 130 TASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVTYHSIESLLS 189
            +  +++ L SRK +KK++ K +K ++  QS KD  + ++V +    EAVT    ESL S
Sbjct: 123 -SGEVKKYLVSRKFLKKSLQKVIKSLKVCQS-KDSTNASLV-VFGRAEAVTMALFESLFS 182

Query: 190 FIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNHHTNKSKSLI 249
           F++G K   KWS    VSK +   +V C +E    +   R+D            +S+  +
Sbjct: 183 FMSGSKACGKWSL---VSKMMSQNKVTCEAEANEFT---RIDSEF---------QSEKSL 242

Query: 250 QVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNI 290
           Q+ED+QN L  C   I+++E+ +E+L + +IK RVS+LNI
Sbjct: 243 QMEDVQN-LESC---IQDLEDGIESLSKSLIKYRVSILNI 253

[Close]

BLAST of MS022221.1 vs. TAIR 10
Match: AT4G35210.1 (Arabidopsis protein of unknown function (DUF241) )

HSP 1 Score: 156.0 bits (393), Expect = 4.7e-38
Identity = 106/280 (37.86%), Postives = 170/280 (60.71%), Query Frame = 0


Query: 10  ISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDLHDCIDKLLL 69
           +S HVRS+S PS+ HP    VDEQL RLR S   ++SSSS+C RL  LQDLHD ++K++ 
Sbjct: 3   VSFHVRSSSYPSRQHPQAAHVDEQLTRLRSS--GTASSSSICQRLSNLQDLHDSLEKMIR 62

Query: 70  LPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESFLRRRRGEIG 129
           L ++ QAL Q    + ++ LL+GS+++LD C I+ + L Q +E   E++S +RR+RG++ 
Sbjct: 63  LSVTNQALSQ----DQIEKLLDGSIKILDLCSISKDGLSQMKESLKEIQSIVRRKRGDL- 122

Query: 130 TASSLQECLSSRKMIKKAIHKALKGMESKQSHKDHGSLTIVNLVKEVEAVTYHSIESLLS 189
            ++ +++ L+SRK +KK+  K LK +++ Q+  D      + +  E E VT    ESL S
Sbjct: 123 -SAEVKKYLASRKFLKKSFEKVLKSLKTSQNKND-----ALAVFGEAETVTIALFESLFS 182

Query: 190 FIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDLTLSSITNHHTNKSKSLI 249
           F++G K   KWS    VSK +   +  C +E    +   R+D+           +S+  +
Sbjct: 183 FMSGSKACGKWSL---VSKMMSQSKGTCEAEANEFT---RVDMEF---------QSEKSL 242

Query: 250 QVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNI 290
           Q+ED+QN L  C   I+++E+ + +L + +IK RVS+LNI
Sbjct: 243 QMEDVQN-LEIC---IQDLEDGIGSLSKSLIKYRVSILNI 250

[Close]

BLAST of MS022221.1 vs. TAIR 10
Match: AT4G35690.1 (Arabidopsis protein of unknown function (DUF241) )

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-22
Identity = 83/300 (27.67%), Postives = 155/300 (51.67%), Query Frame = 0


Query: 7   NPRISHHVRSNSLPSKPHPLINQVDEQLVRLRDSEATSSSSSSLCHRLGALQDLHDCIDK 66
           N  + + +RS SLPS  HP    ++E L +++     + SS S+   L  L++L++C + 
Sbjct: 3   NMLVKNQLRSISLPSSSHPSTTGIEESLNKVKTINTMTGSSESVLMGLEGLEELYNCTED 62

Query: 67  LLLLPLSQQALIQLSDKELLDDLLEGSLRLLDSCDIAMNALLQTRECTNELESFLRRRR- 126
            L +  +Q+ +      E ++++L+GSLRL+D C ++ + +++T+E    ++S +RR++ 
Sbjct: 63  FLKMGSTQRVMSSSDGSEFMEEMLDGSLRLMDICSVSRDLMVETQEHVRGVQSCVRRKKV 122

Query: 127 --GEIGTASSLQECLSSRKMIKKAIHKALKGME------SKQSHKDHGS-----LTIVNL 186
             GE     ++   +  RK ++K   + L  ++      S  S  ++G      + +V+ 
Sbjct: 123 VGGEDQLDVAVAGYVGFRKNMRKEAKRLLGSLKNIDGGLSSSSSVNNGEQEEHLVVVVDA 182

Query: 187 VKEVEAVTYHSIESLLSFIAGPKMPSKWSCWSSVSKFVQPKRVACISEETNISVVERLDL 246
           +++V +V+   + S L F++G +  +  S  +SV K    K+V  + E  N   +E LDL
Sbjct: 183 MRQVVSVSVAVLRSFLEFLSGRRQSNIKSKLASVLK---KKKVHHVEETKN--ELENLDL 242

Query: 247 TLSSITNHHTNKSKSLIQVEDMQNSLRECGTSIKEVEEELENLYRFIIKTRVSLLNIFNH 293
            +    N             D+Q  L E   SI   E++LE L+R +I+TR SLLNI +H
Sbjct: 243 EIFCSRN-------------DLQKKLEEVEMSIDGFEKKLEGLFRRLIRTRASLLNIISH 284

The following BLAST results are available for this feature:

BLAST of MS022221.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136177.1	1.3e-154	100.00	uncharacterized protein LOC111007932 [Momordica charantia]	[more]
XP_038887200.1	2.9e-114	78.08	uncharacterized protein LOC120077387 [Benincasa hispida]	[more]
XP_004144945.1	1.6e-112	75.68	uncharacterized protein LOC101212326 [Cucumis sativus] >KGN43323.1 hypothetical ...	[more]
XP_008447871.1	3.9e-111	75.34	PREDICTED: uncharacterized protein LOC103490224 [Cucumis melo] >TYK23300.1 uncha...	[more]
XP_038888978.1	3.6e-109	76.71	uncharacterized protein LOC120078742 [Benincasa hispida]	[more]

BLAST of MS022221.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS022221.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C4U7	6.2e-155	100.00	uncharacterized protein LOC111007932 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A0A0K1I3	7.6e-113	75.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G023970 PE=4 SV=1	[more]
A0A5D3DIV1	1.9e-111	75.34	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BJ22	1.9e-111	75.34	uncharacterized protein LOC103490224 OS=Cucumis melo OX=3656 GN=LOC103490224 PE=...	[more]
A0A0A0K659	2.1e-107	75.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G023950 PE=4 SV=1	[more]

BLAST of MS022221.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17080.1	4.6e-46	41.55	Arabidopsis protein of unknown function (DUF241)	[more]
AT2G17070.1	2.0e-44	41.20	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35200.1	3.8e-40	40.71	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35210.1	4.7e-38	37.86	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35690.1	1.6e-22	27.67	Arabidopsis protein of unknown function (DUF241)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 251..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..24
None	No IPR available	PANTHER	PTHR31509	BPS1-LIKE PROTEIN	coord: 10..291
None	No IPR available	PANTHER	PTHR31509:SF74	DUF241 DOMAIN PROTEIN	coord: 10..291
IPR004320	Protein of unknown function DUF241, plant	PFAM	PF03087	DUF241	coord: 54..289 e-value: 2.4E-61 score: 207.6

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS022221	MS022221	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS022221.1-cds	MS022221.1-cds-scaffold47:1794840..1795715	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS022221.1	MS022221.1-protein	polypeptide