MS018732.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS018732.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	MATH domain and coiled-coil domain-containing protein
Location	scaffold313: 1551285 .. 1565616 (+)
Sequence length	690
RNA-Seq Expression	MS018732.1
Synteny	MS018732.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGATGAAAAACCTATCCATTACACCTTACAAATCCAATCCTTTTCATTGCTCAAAGCAGCACTTGCTAGTTCCAATCGTGACAGATATGAATCCCAGATTTTTAATGCCGGCGGTTATAAATGGTAGGAATTAGAATTAAACTTTTAGCTTCACTTTTCAAGGAATTTTACTAATAACTAATAAGTTTTGGTTTGGTTTGTTATGGTAGGAAATTAGCAGTGTATCCGAATGGAGATGTGAAAAGAAATGGGGCTGATCATATATCCCTCTATTTGGTAAAGGCTGATGATGACATTCATCCTACTTCAGAGGTCAATGTTGTGTTTACGTTTCTTGTTTATGATAATATTAGAGACAAATATTTGGCTGTCCAAGGTAAACCAAATTACTAAAAAAACATGGTTTAAATTTAATTTTGTTTTGTTTGATCATAATTAAATAATATTGTTGCAGATGGGAAAGTAAGACGTTTTCATGCAATGAAGACAGAGTGGGGATTTGAAAAGTTGATATCTCTTGACACTTTCAATGATTCTTCAAATGGGTTTGTAGTTGGTGATTGTTGTGGGTTTGGAGTGGATGTCGTTGTTATGAAATGTGATGGGAAGGGGGAGGTCGTTTCCTTCATCAAGGAACCAAAAAGTCACAAATATACTTGGAAAACCAAAAACTTTTCACAACTAGATAAGAAATTTTATGAATCCGGATCCTTTTACCGTGGAGGGCTACCGTTGGTACAAAAAATTTTAATGTTAATATGCTATAATGACTTTTTGGAAACATTTATTTGTAGTTACATTTTTATCTATGTTTCAGGAAGTTATGGTTGTATCCTAAAGGAAGCTCCAAAGCAAAGACTGGGTTTTTGTCCTTGTACCTATCGTTTAATAGTTACGAAGAGATTTCCCAAGGTTCACAAGTGTACGTTGAATATGAGATAGCCGTATTGAGTCAACTTGGAGCTGAACCAGAGAAAAGAACATGTAATTTACTACTTTTTAACGTAATTGTCACTCTAAAGCTTCATACTTGAATCAAATTTCTTTTAAGTCAACGAAGTTGGGATGATTCACTTTTTTATTGTACTTTTTAAGACCTTTAAAATCACTTTTAGGTAGGTAATCAAATAATATGAATTTTTGTTTTTTCTTTAGTTCTAAAAGTTATACCAAAAGTTGGCTTTTATTCTGTGTGCAGATAACTGTTGGTTTGGGTTTGGTGGTGTAGAATCCGGCCGCGGTTGGGGTCACCCAAATTTCTTGTCATTGAGAGATCTCAACGAACCAACGGAAGGCTTTATTGTTGATGACACTATAATTGTTGAAGTGAAAATTAATGTTGTCTCCACCTTGAAGAAAATTGTAGAGGGGAAATACTTCTCTTTGAGATCATAATGCTCTCTTAGATGCAACATTTTAAGACAGTAAAAAGTATTTGATTTATGTTGCAAGTTTTACTCTACGCTTCTAATTTAAAATGCGGTGTACGTGGATCAAACACGTGACATTCAGATCTTCAATCTAACACTCCCAAGTGAGTTATCCCCACATGGTTATTGTAGAATCTAATTTTATCAAGTTTTATTGTAGATTTGAACAAATGTTGAATGTTTATTTACTTAAGTTAAAGTTCTTACATACTCATTCAAATTAATAATAATATTTAAAAGTACGGTAATCAAAAGGAGGTTTTATTAGAATTTTGATTAATAATAATAATAATAAAATTTGAATAAATTATATTTTTCTTTAAAGAAAAAAAAAACAAAAATTTTGAATTTTGTTTTTTTTGAAAACAAGAAATTTTTTTACTTAGATAATGGCTTTACCAGAATTCAATTTTAAAAGTATGCCAAAGATCATAAGTTTTTTTTTTCCTCTCTCTGTATACAATAAGTGAAGTTGGAAGACTATATGACCTAATAGTTAGAGATAGTGCGTCAATGCTGAGCTAAGTTCATGTTGGTCAAAGATGATAAAGAATTTTGCAATTGAATAAAGTTTGATTTTTTTTATTGGATTTTGGAAAAAAAAAAAAAAAAAAAAATCAAACTTAAAATTCAATGACAAAATTCTTTACCAAAACTACGCGGGTGTAATTTGATTTGTTGGTATTTAGGTTTTTTTCTAACTCTCAATTTTCATTTGATTTGCCTCCATCGTTTATTTTTTCTTTTAGTTCAAATCTCACTTTTAAGATTACTATTATGGTCTCTAAACATTCAAAATACCCATTTTATAGCTTCCATAAAAATTCAAAGTTCTATTTTAGCCCTTTAAACTTAACAAAATTTCTTATAATTATTTTGCTTTTAACAAATGGTCAAGGGGTAAAGTTAAAAAATAATGTAATTACAAGAAAACATTATAAGTGGGGTAGCTTTAAAAATAATTAGGTTAAAATACTATTTTGGTTAGCTAGTGTAGTTTTAGTTTTGGTTCATTTTTTATTTTAAAAAAAATGTTCATTTTAGCCCTTTAATTTTTAAAAAATTTTTTTTTTATAAAAAGCTATCATTTCATTAAAAGTACGGGAGGAACAAAAAGGAAAATGCTACCATGAAAGCATTCCAGAAAAGAAAATGGTAGCTCAATCAAAGGGAAGCATTCCAATGTTGAGAAATGGGAGCTATATTGTAATTACAAAATGTTGGTTTTGGCTTTTATACTTTTAACGAAGAAACTTGGCTCCTTTAAGTTGAGGTTCTCCTTAACACCATTAAATATTTGACTACTCATCATTTTTTATTCCTTTTTCATTTTTCCCCATATTTACAAAAGTCTTAACACAAATTCTACATATTAATGGAAATAAAGTTATAGTTACATTTCTATAAATAAATTGGGTGTAGGTGTCATATTGAAATTGTGATAGAAAAATAAGATTAAAAATAAAATTAAGGGACCAAAATGGTTACTTTTTAAAAATATAGGAACCAAAACGAAAATTTTGAAAGTATAGCATAAAATGAACAAAAGTTGAAAATAAGAGACCAAATTTTTACCAAATAAATATTTTAAAAATACAATTTAAATAGAAAATTTCAACGTTAAAGTACCTTTTAAGGTAGTTTTTGTTAGGTTAAAAATTTGGTAGAATACCCTATATCAATGTTGTTAAGCTCGTACCATACAAGTGAGTTTATTGTTCCTTTCGTATGTTGAATCGTACTAAACGGATCGGTCCGGTTCAAGAACAAAAAAGAAAACTAGGATTTTTGGTAAATCTAAATCGTATCCTACTTTTTTTTCCCTTCTCATTCTATTTAGTTATAAGACTATCCTAGATTCTGCTTCTGCTTCTGGTTTTTCATCTGCAACTTTAATTTCAGTTGTAATTAACTAATTCTTCTTCTAAACCTATCTTGAATGCTTATAATTAATTTTCAATGTTTTTAATTTCAGTTGTAAGGTCCGGCAGAGCCGAGAAACAAGTCCATTATGCCTTCAAAATCCAATCTTTTTCCTTGCTCAACACGCACTCGCTGCTTCCAATCGTCACCAATTAGAATCTCAAATCTTCAATGTCGGCGGCTATAAATGGTGACTTAATTATATATAATTCAACTCTAATTCCAGTAGGATCTTAATTCATATTGGTTTCTCAAACGTTTGTTTAATTTAATTTGTTATTGTAGGAAATTGGCTGTGTATCCAAATGGAGATGAGAAAAGAAATGCGTCTGATTATATTTCCCTCTATTTGGTAACCGCCGAGGATGACATCTTATCAATTACTTCAGAGATCAATGTTGTGTTTAGATTTCTTGTTTATGATAGTATCAGAGACAAATATTCAGTAGTCCAAGGTAACCAAATTACTCAAAAACATGTTATACTTAATCTTGCTTGGAAGGTTTTATGTTTGATTGTATATGTATATTAATATTGTAGATGGAAAAACGAGACATTTTCAATGTAATGAAGACAGAGTGGGGATTTGAAAAGTTGATGTCACTTGAAACTTTCAACGATACTTCAAATGGATTCCTGGTTGGTGATTGTTGCGTATTTGGAGTGGACATTTTTGTAATGAATTGTGATGGGAAAGGGGAGGTCTTTTCCTTGATCTACCAACCAAAAGACAACAAATTTATGTGGAAAATCAAGGATTTCTCACAACTAGATACGGCTTTTTATGAATCCGATGCTTTTACAGTGAAGGGCTATCGTTGGTATGAAAATCTTTTGATTATATATGTTCTTAATATAGTTATTTTTTGGAAACATATATGTATTTGCATTTACATATATGAATGTTTCAGGAAGATAAAGGTATATCCCACGAAGAACAACATGTAATTAACAAAACTTCTTCTTACCGTAATTTGAATCAACTTGGAGTTGGAGTTGAAAAGTTCTTTGTGTTTATAATTTTTTAGAAAGCACTTTTAATCATTTAAAATCATTTACATACTGAAAAAAAATGATTGAGAGAAGAGGTGTTTCTTTTTTAAAAAATCATTTTTTCGACCGTCATTCCAAGCACGCTATATCATTCATGCTTATTTTCCCAATATGGTGATAGAAAAGGGTCACTCAGAAACATTCTTTTTTTTTTTTTTGGGAAACGATCACTTCATTGCATAGGTGAGAAACATAGAGGGAAGATTAAATAAAAGCTCCCCAATTTAGAGAAATTACATAAGGATCATAATTACAAAATAAAGAAGATTTTGATGACCAAAGAGATGCAGGTCGAATAATGTCTTCCCAGATATGTTTAGTCAAAGATTTTTCTTTATCTGCGACAACTGTTCCTCTCGAGCCAAATATGCCAGATTGTCAAATTGATCGCATTACTCTACGGAACCGTTCTCTTGCTGGAAAGAGGCTTGTCAAGACACTCTGAAATAAAATGATCGATATGTCTTGGAATTGTGGTGCAAATATCATAAGTGGATAAGATATTATTCCAGAGTCTAGCTGATAGTGGGCAATGAAGAAGTAGATGGTCCAGTGTTTCCGAGTCTGACTTGCAAAGGGGACACCAACCTTATTATATACGTTTTGGAGGCGCTTATGGATTTTCTCTCGAGTGTTAATGCCACGGTACATAACACACCACAAAAAGAACTTACAAACTTCTTGGGAATAAGAAACTTCCAAAGAGCCGAGAAGAAGGAAGGGGGAGTGAACTGCTAGTGTTCCAGAGACTGGCTTTGAAAGATTGCACCGAAAAAAGGCCGTTGTTGGAGAGGATCCATCTAGGAGAGTCTGAGCCTTGAAGGTTCGAGGGGCGAGGGAACTCAGTGGTTCTCTGTGACCATATAATCGACTCGGCTCTTTGAAGAAGAGGTCTTCTAGGCGAGAAAGACGGAATTCCATGATCCCCGTTCCATGCTTCAAAAACAGATAAATCTTTCCTATTAGAAAGAGCATAAAATCTGGGAAAAAGCAGGTAAATAGGGCCTAGGGCCTTTTCCAGTACAATTGTGGTGCCAAAAAAGGGTATCTCTGTCGTTGCCAATCTGCCACTGAATATGGCTACTGAAAGAATCTTTTTGTTTCAGAATATAGAACATGGGGATTTTGAACTTCCATATCTACTATATAAAGGTATAATATCAAAAGCCTCAGTAGAGTATTTAACCGATATAAGAGAAAACCAGAGACTATCTTTATCAGTTAAATACCTCCATATCCATTTATTGAGAAGGGCCGAATTTGTAGCTGCAATGTTCCGAATATCGCGGTCTCCACTGTCTTTTGGCAAGGTGACAATATCCCAGCGGACTAAGTGGGAACTTTTGGAATTTTAACCCTCTCCCCATAGAAAATTACATAGGGAGGCTGCTTAAGGACAGCTTGAACGAGAGTTAGTCTGCCTCCTTAGAAATGTATGTGAATTTCCAACTTTCAAATCATGTGTATTCGCTCAGGGAGCCAGAAAGAGTCAGCCTTTGGGTTACCCTAGAGGCATACCAAGATACGAGATTGGAAGAGGGGAAACCGGTATCTGCCATGAATATGCCAAGGACGCAAACTCTGTAGTTGATACATTCACCCCCAAGAAGGAAGACTTTTGGAGATTGAAGTTTAAGCCCGATGCAAGCTCGAAAGCTTGAATGATGCTATGGAGATTGTGCAACTTTGCGGCATTTGAGCTTGAGAATAACATAATGTCATCAGCAAACGGTAGGTGGGAGAGGTGAAAGTTTCGATGACCGATTTTAAAACCCTCAATCAGACCCTTAGAATAAGCTTCATCTAATAATCGGCTCAAGTAGTCCATTGTCAAAACAAATAGGAAAGGCGATAGCGGATCACCTTGTCAAATACCCCTAGAAGCTTGGATGTATCCTCGAGGTTTACCATTTAGCAAGACTGCATACGAAACAGTATAAATACAGCCACTGACCCAAGAACACCATTTGTCATTGAATCCTTTTAGATTGAAGATCGGTAGTATGAAGTGCCAATTGATCTTATCGAAAGCTTTCTCGATATCAAGATTTATGAGGATACCCTTCGTATGGGAGCATCGTCAAAGATCCACCATTTCGTTGGCCATCAGTATTGCATCTGTGATTTGCTGACCTTAAACAAAAACACTTTGTTGCTTGGCAAGGGTAAAGGGAAGAACCTCTTTTAAGCGATCGGCTAAGACCTTTGCAAGAATCTTGTATATGCTTGTAGTGAGACTGATAGGCTATGTTTGGGGCTAGGAACTTTAGGAATGAGGGCTATAAATGTTTCATTGAGTTAACGGTTCACTATCCCTGTTCTGAAAAAGTCATGGAACACCTCCTTTATGGAAGGCTGGAAGATGTTCCAAAACTTTTTGAAGAATTCTATAGTGAAACCGTCCGGCCCCGGTGTTTTATTATTCCCAGATTCTTTATGCTCTTGAGAATTTCATCGTCGGTAAAAGGGCGAGTAAGTGATGAAGCCTGTTCTATGCTTAAGGGGTCCCAGTTAAGGTTACTGACCATAGACCCCTACTTTGTTTTACCCTGATAGATATCCTTGAAATGTCTAATGGCCTCTTTTTCAATCGCATCATCTAAGACCAAACTGGTACCTTCGGATCAACAATCTCCGAAATGAAGCTTCTCCTCCTTCTAGCAGTGCAAACCTTGTGGAAGAAAGCTGAATTCTCGTCTCCCTCCATAAGCCAAAGCTTTTTACATTTTTGGCTCCAAATTCTAGCCTCCGTTAAGTTTAAAGAATTGAGATCGTTTTTTAAGGACAACCGGCGACAACAATCAGATGAGCTTATAGAACGTGCCTCTTCCGACTTATCGATTTCCGAGATTTGATCAATAATATGCTAGCCTTCTCCTTTTGTAGATTTGGACCGTGGTTTCTCCTCCATAGCTTGATGCTCTTGGCTAAAGCTTTAAGCTTTTTTATAACAGCATAACCTGGGAAGCCTTCAGATACACAAAGAGGCCATGTTGATAGAATGTGTTGCTGAAAATGTTTATCCTGGATCCAAGTGTTCTCCAATCGAAAAGGGCAAGGACCCCATTGCTGGAAGGGGGTCTCCAATAGGATCGGAAAATGGTCGGAACATGATGGAGGAAGCCTCCTAATATGATGTTGGGAGAATTTTTATGCCAGTCCTGAGTATTAGACCATGTGTGCCGAGCGTTGTTCCTAGGGGGATCCAAAAGTTCCTACCATAAAAGCGACTCCGATGGACTTTGATACCATATCAATATTCATGGGTTCCATCTCAAAGTCAATTAACAATGAGAGGAGTAGCCCATGTCTATTATAAACCATTGTAAGGTCCATTCTTTTATCAATGTGGGATCCTTAACACTAATATTGGATGAGTCTCAAAATTATCGTTCAAATCACTCTTGAAATAATTAAATTTGTTTTAAATAATTTCTTTCAAGAATCATTTAAAGTTGTAGGTGTTTTTTAGCCTTTTTGGTTTGGGAATATTACGTCTTTGTCCCTGAGTTTTTCTAATAGGTCATAGTTTTTTTAAAAAATACATAGTGTCTAAGTTTTGAAAAATAAGTTTTTAATGGTCTTCAGTAATCTTTACGGAATAATTATATTGCTTTTAACAAATGGTCAAGGGGTAAAATTTAAAAATAATTTAATTACAATAAAAAAAAATTCTAAGTGGGGTATAGCTTTTAAAATAAATAGGTTAAAATATTATTTTGGTCAATGTACTGTTAGCTTTGGTTCATTTTAATCTTGTATTTTAAAAAATATGTTCATTTTGATCTATGTATTTTCAAATTTAGTCATTTTAGTTCCTGTATTTTTAAAAGGTTCGTTTTTATCCTTATATTTTGGAAAAGCGATCATTTTGGTCTATATTTAAAAAGTTTTAACACAAATTCTATATATTAATGATTTTATATTTAATTAGAATTAATAATGAAATTCAGAAGGTGTTGGAATCTCAAAAGTTTTCAATTTATCCTTCGACTTATCCATGATCTCCACATTAATATGTATATATGACGTTCTCTTCACTCATTTTTACAACAATTTATTAGCTATCTTTTGAGGTTTTTATTCTAAAATTTCAGGCATGGTTGTAATTTTGAAATTTAATTATTATTGAATTTTTTGAATTTATCAATTTAATATGATTTTATTCCTCAATCTTCTCTCCCGCTAACATTAAAAAATAATGCTATTATCTTTGTTTTTATAGTTTTTTTTTTAATGAAATGACATAACTTTAGTAAGATTAAATAAAAAAAAATAGCAAAAAAAATTCTAATTTATTTTTTTTAAATAAAGAAAAATTCTTTTTTTTTTTTAATAAGAAAAATTCTTTTAAGCTAAATCAAAATATTATCAATAATTAATAATCTAAAGTATGTTTCACTCATTAATGATAAATTTATTATAAATCATTAATATTATATATAATAAGTTAAAAATATACTAAAAAAATTATAAAAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAAAAGGTGAAGGTGAAAATTTTGTTATTTCACTTTTAAAAAATATTTTATCTTTAATAATAATTAATTATAAAACTTTAATTGAGTTTGCAATTATTTCACCAACAAACTTTTGTTACATTCATTTTTTATCAATTAATATTATTTATTATTAATTTTTTTAAAAAAATTACTTTATTATTGGTTATAAGCTAAAGTTTAAATAAAATTAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCGGAACCTTCGTTATTTTAAAAAATTATTCCTTAATAATATTTACCCAAAATTAAGGGTGCAATTAATGCAACCGATCTACTTGTTCTTTTTCTTTTTCCCTATAAAAAAGTCGGAAATACAAATAGACTGCCTCTAGGCTCTAGTTACAAAGAAAAAGAAGAAGGAATACGAATCAAAGGGAACTCAAATAAAAAAAAGAAACATAAATAAATAAAGAATACGAATAGACAACAAAACCAAAAATAAAAAAATAAAAAATAAAAAAAAGGAAAAAAGAATACGAATAGACAAAGTTTACAGTATAAGATATGAAGTTTTGGTTTCATGTTTTGTGGGAAAGATAATAATGGAGAGGATGAATATCATCTTCCACTCGCTCTCGTTTGAGGCCGACACAGATTCTGGTTGTGGTCTCTATTTATCTCTCAACTACATAATTCATAATTCATATAAATAAATGGATTATTTTTTGAGCTATTTGGGGTATATTTTATATGGTAATTATCCATTATTTTGTGCAGTTGTAATTAGGTCCACCAGAGATGAAAAACCTCTCCATTATACCTTACAAATCCAATCTTTTTCGTTGCTCAAGACTGCACTTGTTAGCTCCGATTGTGACAGATATGAATCCCGGATCTTCAATGCTGGCGGTTATAAATGGTAGAGTTTACACTTTATGAACTAATTATCCGTGATAGTGTGATAAATGGTGATATAGTTTCACTTTTGAAGGAATTTTACTCATAATAATTTTGTTTTTGTTTGTTATGGCAGGAAATTAGCAATGTATCCCACTGGAGATGTGAAAAGAAATGGATCTCATGATCATATATCCCTCTATTTGGTAAAGGCTGAGGATGACATTCCTACTTCAGAGGTCAATGTTGTGTTCACGTTTCTTGTTTATGATAGTCTCAAGGACAAATATTTGGCAGTCCAAGGTAATTACCAAAGTTACTCAAAACATGGCTCTAATTTGATTTTGTTTTGTTTGATCATAAATAATATTATTGCAGATGGGATAGTAAGACGTTTCCATGCAAATCAAGACAGAATGGGGTTTTGAAAAGTTGATTTCTCTCGACACTTTCAATGATTCTTCAAATGGGTTCTTAGTTGATGATTGCTGTGCATTTGGAGTGGACGTCGTTGTTATGAAATGTGATGGAAAGGGGGAGGCCCTTTCCTTGATCAAGGAACCAATAAATTACAAATATACTTGGAAAACCAAAAACTTCTCACAAATGGATAAGAAAATGTATGAATCGGATCCTTTTACAGTGGAGGGCTACCGTTGGTACGAAAAATAATTTAATTTGATTATGCGCCATAATTACTTTTTGGAAATATGTGTTTGCACTTACATTTTTATCCATGTTTCAGGAAGTTATGGTTGTATGCTAAAGGACGCTCCTGTCCTTGTACTTGAAATTAGATAGTTCCAAAGAGATTCTCCAAGGTTCTAAAGTGTACGTTGAATATGAATTGACCTTATTGAGTCAACTTGGAGCTGAACCAGAGAAAGAAACATGTAATTTACTACTTTTGTTTTGACCACAATTTGCAAAGCATTCCCTAAAATTATGTTTTTTTGCTTTGGATTGGTAGTAGTTGTAGAACAGTGAAAAGTGTGGTTTTAGTAACTAGTTAAAATACTTTTCAAAATTTTCCTTGTATTTACATAGTCTGAAGTGAATATTGAAAATTCTAAAAACACTTTCAAAATGCATTATGGAAAAAAGTGTGGCTTAAAAACATAATGCTCAAGAGGTTTTTTTTTTTTTTTTTTTTCGCGCAGATAATTATTGGTTTGCTGGTGGTGGTCCGAATTTCATGTCATTGAGTGAACTCAAGAAACCATTGAAGGGGTATCTTCACAATGATACTCTGAAGGTTGAAGTGAAAATTAATGTTATCTCTACCTCGAAAAGTTTTAACAGTAGTAGGGAAAATGCTGCTGCCTAGATCATAAGTGTGTTTTCTTACATTTTCTACATAACTATATATTGATGTCTTAGTCCGTTTGAAGTCAAAGTACAGCCTTTAGCCTCCAGCTTTGCCTATATGTGTTACCTTTTTATTTATTTGAATACAGTTAATTGCAGTCTTAAATTTATAATAAAATGTACCATGTTAATTAGTTGAGAGAGATTTTGGATGCATGAAGACTTGATATCTATTCCATACTCAATGACTTTTATCTATTGATAATTTCTTTGTTGAGACTCTATTTGTTTCGCTCACCAAACAAAGATATATTCTCTGGAGCAACGCTGTGAGCTCGATCCTTTTGGCATATTTGGTTGGAAAGAAATTACCGTACTTTCTCAGGCACATCGAAGTCTCCGACCAACATTTGGGAAAAGATATAATAATTTCATCTTCTCTTTGGTCCTCTAAATCCCTTATTTTTTGTAATTATGATGCCACCACCATTTCTTTAAATTGGGTTGCTTTCATTTAGACCTCTATTGTATATGTTTCTCACCTAATGAGGTGGTTTTTCTAAAAAAAAAATACTTGCTATCTAGCTTTTTTCGTGGGGAGTTGGGATTTTACACTTGGCATTAGCTTTTTTCATGGTCTAGGTCTACTTATTTATATTAAAGGCTAATAGTAATTATGGAATAATTTTAACCCCCTACTTAAAAAATANNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTAATAATGTTTAATTATACACTTCCTTTATGTGGTACTTTAACACATTCAATATTTCTACTGCCCCTGCCCTCCAAGATCGGATTAAACATTTTGTCTTGGAAGTTTATTCATCTCACCCTACCAGTAGCAGATTCATCCTATTGCAAAATGTTGTTGGCTCCATCCATTGGTCTGTCTAGTTCAAGAGGAACAAACGTATGCATAGTATGACTAGTTTGCTGCTATGTGTATAGTACGACCAATTTTGTATAATTGATGACTTAATTGTGTAGGACTTGATTTCATTGAGATTAGTGAGCTTCGGGGGATTTGTGCATTGCTTTTTGTTATTTTATTTATTTATTTTCTTCTGAGACATGCTTTTCGTTAAAATTAGTGGGCAATAGCATGGGATGAAATTTAACTAAATTTTTGGGATGCAATAGGATGAAATTCTAAGTTTATGGTATAAATTAATACACTCTCCCAAGCTTTGAGGTAAAAATTCATTTTTTTTTCTCGCCTGTTTTCAATATAACCAATTTTTTGCATTCCCCTTTCCAAAATCTCGGTATAAAAGTGGGATTTTTCTTCCCTGTTCTCCTTGTACCAACTTCCGAGGAAGAAAGAAAAAAAAAATAAAAGGAAAAAATAAAGAAACTACCAGAGGAAAAAGAAGACAATGGGGACAAAGAGGAAACAGGCAGATTTAGGAGACGAAAGGAACAACATTTCCCCCTCTCCAATGTTCAACGAAGATTCTGCTTGTGGTATAACATTAAAAGTTCCAATTTAAGCATTAAAAGTTAAAATATCAACATCTGCTCCATCTTTTGCAGTTGTAAGGTCCACCAGAGACCAAAAACCTCTCCATTATACCTTAAAGATTCAATCTTTTTCGTTGCTGAAGACCGCATTTGCCATACCCAAACCCCACGAGCGATATGAATCCCAGATCTTCGTTGCTGGGGGTTATAAATGGTGCCTCATACTCTCACCATAACTCCATTCCTCGTCTTTGTACTGATTCATCACTATTTTCCTTTTAATGGTTTTTGCATGGGGACATCATTTTTTGTGTGCAGGAAATTAGCTCTGTATCCCAATGGAGACAAGAAAAGAAATGGGTCGGATCATATTTCCCTCTATTTGGTGTCAGCTGATGATGCCATTTTATCTACTAATTCCGAGGTCAATGTTGTGTTTACCTTTCTTGTTTATGATTATCTCAGAGACAAGTATTTGGCTGTCCAAGGTAACCAAAATTACACAAAACATGGTTTTAATTTAGTTTTGCTTGCTTTCTTTGAGGTTTTTATTTTCGTGGTTTGTGCAGATGGGAAAATAAGGCGGTTTCATGCTCCAAAGACAGAGTGGGGATTTGAAAAGTTGATTTCTCTTGACAATTTCAGTAATCCTTCAAATGGGTTCTTGGTTGATGATTGTTGTGCCTTTGGAGTTGACATTATTGTTATGAAATGTGATGGGAAGGGGGAGGTTATTTCCTTGATCAACCAACCAAAAAACAACACATATACCTGGAAAATCGAAAACTTTTCAAAACAAGATCAAACTTTTATTGAATCCAATCCTTTTATTGTAGAGGGCTACCATTGGTATGAAAGCTTTACTTTTGATTACGTGTTCTGCAATTATGTATTTGCACAAAGTTATATGTACATTTTACCTAATTAATTTATCATTTATCTTTCAGGAGGATATGGTTGTATCCTAAAGGATGCCCAAAGGCGACGACTGACTTTTTGTCATTGTACTTGGGGTTAGATAGTTTAAAAGAGCTTCCCAAAGGTTCCCAAGTGTACATTGAATGGGAGATGAGCGTATTGAGTCAATTTGGAGTTGGGCACAACAAAAAAACTGCACGTAATTGAACAATTTTTTCAATCATAATTGTTGTCTCTCTATGGTTTTGAAAACCTTTTGACATGCGGTCACGCTATTTTTTGTTTGCATTCAAAGGTCTTGTGCCTATGTTGTTGAGTCACGACCTTTTATGTGCAGATAACCGTTGGCTTAGTAGTGGAGGAGAGTACGACGACAGTTGGGGCGTTCCACGTTTCATGTCATTGACCGATCTCATGGAACCGACAAAAGGCTTTATTTATAATGATACTTTGATTGTTGAAGCGAAGATCAATGTTGTCTCTACCTTGAAAGAGTTT

mRNA sequence

AGAGATGAAAAACCTATCCATTACACCTTACAAATCCAATCCTTTTCATTGCTCAAAGCAGCACTTGCTAGTTCCAATCGTGACAGATATGAATCCCAGATTTTTAATGCCGGCGAATGGGGTTTTGAAAAGTTGATTTCTCTCGACACTTTCAATGATTCTTCAAATGGGTTCTTAGTTGATGATTGCTGTGCATTTGGAGTGGACGTCGTTGTTATGAAATGTGATGGAAAGGGGGAGGCCCTTTCCTTGATCAAGGAACCAATAAATTACAAATATACTTGGAAAACCAAAAACTTCTCACAAATGGATAAGAAAATGTATGAATCGGATCCTTTTACAGTGGAGGGCTACCGTTGGAGGATATGGTTGTATCCTAAAGGATGCCCAAAGGCGACGACTGACTTTTTGTCATTGTACTTGGGGTTAGATAGTTTAAAAGAGCTTCCCAAAGGTTCCCAAGTGTACATTGAATGGGAGATGAGCGTATTGAGTCAATTTGGAGTTGGGCACAACAAAAAAACTGCACATAACCGTTGGCTTAGTAGTGGAGGAGAGTACGACGACAGTTGGGGCGTTCCACGTTTCATGTCATTGACCGATCTCATGGAACCGACAAAAGGCTTTATTTATAATGATACTTTGATTGTTGAAGCGAAGATCAATGTTGTCTCTACCTTGAAAGAGTTT

Coding sequence (CDS)

AGAGATGAAAAACCTATCCATTACACCTTACAAATCCAATCCTTTTCATTGCTCAAAGCAGCACTTGCTAGTTCCAATCGTGACAGATATGAATCCCAGATTTTTAATGCCGGCGAATGGGGTTTTGAAAAGTTGATTTCTCTCGACACTTTCAATGATTCTTCAAATGGGTTCTTAGTTGATGATTGCTGTGCATTTGGAGTGGACGTCGTTGTTATGAAATGTGATGGAAAGGGGGAGGCCCTTTCCTTGATCAAGGAACCAATAAATTACAAATATACTTGGAAAACCAAAAACTTCTCACAAATGGATAAGAAAATGTATGAATCGGATCCTTTTACAGTGGAGGGCTACCGTTGGAGGATATGGTTGTATCCTAAAGGATGCCCAAAGGCGACGACTGACTTTTTGTCATTGTACTTGGGGTTAGATAGTTTAAAAGAGCTTCCCAAAGGTTCCCAAGTGTACATTGAATGGGAGATGAGCGTATTGAGTCAATTTGGAGTTGGGCACAACAAAAAAACTGCACATAACCGTTGGCTTAGTAGTGGAGGAGAGTACGACGACAGTTGGGGCGTTCCACGTTTCATGTCATTGACCGATCTCATGGAACCGACAAAAGGCTTTATTTATAATGATACTTTGATTGTTGAAGCGAAGATCAATGTTGTCTCTACCTTGAAAGAGTTT

Protein sequence

RDEKPIHYTLQIQSFSLLKAALASSNRDRYESQIFNAGEWGFEKLISLDTFNDSSNGFLVDDCCAFGVDVVVMKCDGKGEALSLIKEPINYKYTWKTKNFSQMDKKMYESDPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDSLKELPKGSQVYIEWEMSVLSQFGVGHNKKTAHNRWLSSGGEYDDSWGVPRFMSLTDLMEPTKGFIYNDTLIVEAKINVVSTLKEF

Homology

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BLAST of MS018732.1 vs. NCBI nr
Match: XP_022146380.1 (probable inactive serine/threonine-protein kinase fnkC [Momordica charantia])

HSP 1 Score: 323.6 bits (828), Expect = 1.4e-84
Identity = 168/279 (60.22%), Postives = 187/279 (67.03%), Query Frame = 0


Query: 1   RDEKPIHYTLQIQSFSLLKAALASSNRDRYESQIFNAG---------------------- 60
           RDEKP+HYTLQIQSFSLLKAALASSNRDRYESQIFNAG                      
Sbjct: 13  RDEKPLHYTLQIQSFSLLKAALASSNRDRYESQIFNAGGYKWKLAVYPNGDVKRNGADHI 72

Query: 61  ---------------------------EWGFEKLISLDTFNDSSNGFLVDDCCAFGVDVV 120
                                      EWGFEKLISLDTFNDSSNGF+V DCC FGVDVV
Sbjct: 73  SLYLVKADDDINPCSHGKVRRFHAMKAEWGFEKLISLDTFNDSSNGFVVGDCCGFGVDVV 132

Query: 121 VMKCDGKGEALSLIKEPINYKYTWKTKNFSQMDKKMYESDPFTVEGYRWRIWLYPKGCPK 180
           VMKCDGKGE +S IKEP ++KYTWKTKNFSQ+DKK YESDPFTVEGYRW++WLYPKG  K
Sbjct: 133 VMKCDGKGEVVSFIKEPKSHKYTWKTKNFSQLDKKFYESDPFTVEGYRWKLWLYPKGSSK 192

Query: 181 ATTDFLSLYLGLDSLKELPKGSQVYIEWEMSVLSQFGVGHNKKTAHNRWLSSGG-EYDDS 230
           A T FLSLYL  +S +E+P+GSQVY+E+E S              HN W   GG E    
Sbjct: 193 AKTGFLSLYLSYNSYEEIPQGSQVYVEYEDS--------------HNCWFGFGGVESGRG 252

[Close]

BLAST of MS018732.1 vs. NCBI nr
Match: XP_022146377.1 (uncharacterized protein LOC111015606 [Momordica charantia])

HSP 1 Score: 290.8 bits (743), Expect = 1.0e-74
Identity = 143/192 (74.48%), Postives = 151/192 (78.65%), Query Frame = 0


Query: 39  EWGFEKLISLDTFNDSSNGFLVDDCCAFGVDVVVMKCDGKGEALSLIKEPINYKYTWKTK 98
           EWGFEKLISLD F++ SNGFLVDDCCAFGVD++VMKCDGKGE                  
Sbjct: 74  EWGFEKLISLDNFSNPSNGFLVDDCCAFGVDIIVMKCDGKGERA---------------- 133

Query: 99  NFSQMDKKMYESDPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDSLKELPKGSQVYIE 158
                          T+ G     WLYPKGCPKATTDFLSLYLGLDSLK+LPKGSQVYIE
Sbjct: 134 ---------------TIGG-----WLYPKGCPKATTDFLSLYLGLDSLKDLPKGSQVYIE 193

Query: 159 WEMSVLSQFGVGHNKKTAHNRWLSSGGEYDDSWGVPRFMSLTDLMEPTKGFIYNDTLIVE 218
           WEMSVLSQFGVGHNKKTAHNRWLSSGGEY+DSWGVPRFMSL+DLMEPTKGFIYNDTLIVE
Sbjct: 194 WEMSVLSQFGVGHNKKTAHNRWLSSGGEYEDSWGVPRFMSLSDLMEPTKGFIYNDTLIVE 229

Query: 219 AKINVVSTLKEF 231
           AKINVVSTLKEF
Sbjct: 254 AKINVVSTLKEF 229

[Close]

BLAST of MS018732.1 vs. NCBI nr
Match: XP_038875772.1 (uncharacterized protein LOC120068142 [Benincasa hispida])

HSP 1 Score: 273.5 bits (698), Expect = 1.7e-69
Identity = 147/303 (48.51%), Postives = 175/303 (57.76%), Query Frame = 0


Query: 1   RDEKPIHYTLQIQSFSLLKAALASSNRDRYESQIFNAG---------------------- 60
           R EKP+HYTL+IQSFSLLK  LASS R R+ESQ FNAG                      
Sbjct: 30  RHEKPVHYTLKIQSFSLLKNGLASSQRQRFESQKFNAGCYEWKLALYPNGDERRNVSNHI 89

Query: 61  --------------------------------------------------EWGFEKLISL 120
                                                             EWG EKL+ L
Sbjct: 90  SLYLVIVGNNILSTTSEVNVVFTFLVYDTLRGKYLTVQDGKMRRFSAMKTEWGIEKLLPL 149

Query: 121 DTFNDSSNGFLVDDCCAFGVDVVVMKCD-GKGEALSLIKEPINYKYTWKTKNFSQMDKKM 180
           DTFND+SNGFLVDDCC FGVD+ VM CD G GE  SLIK+P NY+YTWK  NFSQ+   +
Sbjct: 150 DTFNDASNGFLVDDCCVFGVDIFVMSCDGGMGEVFSLIKQPKNYEYTWKLNNFSQLGSTL 209

Query: 181 YESDPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDSLKELPKGSQVYIEWEMSVLSQF 230
            ES+PFTVE YRW+I LYP GC KA + FLS+YL  DS  +LP+GSQVY+E+EM++LSQ 
Sbjct: 210 KESNPFTVESYRWKILLYPSGCSKAKSGFLSMYLLFDSSNQLPQGSQVYVEYEMAILSQL 269

[Close]

BLAST of MS018732.1 vs. NCBI nr
Match: XP_038874970.1 (uncharacterized protein LOC120067490 [Benincasa hispida])

HSP 1 Score: 259.2 bits (661), Expect = 3.3e-65
Identity = 144/304 (47.37%), Postives = 180/304 (59.21%), Query Frame = 0


Query: 1   RDEKPIHYTLQIQSFSLLKAALASSN-RDRYESQIFNAG--------------------- 60
           RDEKP+HYTL+IQSFSLLKAA+A+S+ R+RYESQIF AG                     
Sbjct: 31  RDEKPLHYTLKIQSFSLLKAAVAASSIRNRYESQIFKAGGYKWKLALYPNGDFKRNVANH 90

Query: 61  ---------------------------------------------------EWGFEKLIS 120
                                                              EWGFEKL+S
Sbjct: 91  ISLYLVSAEDEISSSGLEIKVMIKFLVYDNLKDRYWTIQDGKVRCFHAIKKEWGFEKLVS 150

Query: 121 LDTFNDSSNGFLVDDCCAFGVDVVVMKC-DGKGEALSLIKEPINYKYTWKTKNFSQMDKK 180
           LDTFND+SNG LVDDCCAFGVDV+VMK  DG  E LSLIK+  NYKYTWK  NFSQ+ K 
Sbjct: 151 LDTFNDTSNGLLVDDCCAFGVDVIVMKSYDGNNEILSLIKQLKNYKYTWKINNFSQLSKN 210

Query: 181 MYESDPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDSLKELPKGSQVYIEWEMSVLSQ 231
           +YESDPFTV+ Y W+I LYP+G   A T ++S++L  DS ++LP+GS+VY+E++++VLSQ
Sbjct: 211 VYESDPFTVDNYTWKIELYPRGDSLAMTGYMSMFLRFDSFEKLPQGSRVYVEYDIAVLSQ 270

[Close]

BLAST of MS018732.1 vs. NCBI nr
Match: XP_022146382.1 (uncharacterized protein LOC111015610 [Momordica charantia])

HSP 1 Score: 252.7 bits (644), Expect = 3.1e-63
Identity = 146/299 (48.83%), Postives = 171/299 (57.19%), Query Frame = 0


Query: 1   RDEKPIHYTLQIQSFSLLKAALASSNRDRYESQIFNAG---------------------- 60
           RDEKP+HYTLQIQ FSLLK ALA+S+RDRYES IF+                        
Sbjct: 58  RDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHI 117

Query: 61  ------------------------------------------------EWGFEKLISLDT 120
                                                           EWGFEKL+SL+T
Sbjct: 118 SLYLVTAEDDIPTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLET 177

Query: 121 FNDSSNGFLVDDCCAFGVDVVVMKCDGKGEALSLIKEPINYKYTWKTKNFSQMDKKMYES 180
           FNDSSNGFLVDDCCAFGVD+ VMKCDGKGEALSLIK+P N KYTWKT NFSQ+D+ M   
Sbjct: 178 FNDSSNGFLVDDCCAFGVDIFVMKCDGKGEALSLIKQPKNNKYTWKTNNFSQLDENM--- 237

Query: 181 DPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDSLKELPKGSQVYIEWEMSVLSQFGVG 230
                     ++ LYPKG PKA+ D+LSL+L  +SLKELP+G +VY E+E++VLS++   
Sbjct: 238 ----------KMSLYPKGSPKASPDYLSLFLRCESLKELPQGCRVYAEFEIAVLSKY--- 297

[Close]

BLAST of MS018732.1 vs. ExPASy Swiss-Prot
Match: Q9FPT1 (Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 2.6e-20
Identity = 48/142 (33.80%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 86  KEPINYKYTWKTKNFSQMDKKMYESDPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDS 145
           ++P   K+TW   NFS+ + + + SD F V GY+WRI ++PKG      D LS+YL +  
Sbjct: 50  EDPPTLKFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKG---NNVDHLSMYLDVSD 109

Query: 146 LKELPKGSQVYIEWEMSVLSQFGVGHNKKTAHNRWLSSGGEYDDSWGVPRFMSLTDLMEP 205
              LP G   Y ++ ++V++Q    H + T            +  WG   FM L++L +P
Sbjct: 110 AASLPYGWSRYAQFSLAVVNQI---HTRYTVRKETQHQFNARESDWGFTSFMPLSELYDP 169

Query: 206 TKGFIYNDTLIVEAKINVVSTL 228
           ++G++ NDT++VEA++ V   L
Sbjct: 170 SRGYLVNDTVLVEAEVAVRKVL 185

[Close]

BLAST of MS018732.1 vs. ExPASy Swiss-Prot
Match: Q84WU2 (Ubiquitin C-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.3e-19
Identity = 46/142 (32.39%), Postives = 81/142 (57.04%), Query Frame = 0


Query: 86  KEPINYKYTWKTKNFSQMDKKMYESDPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDS 145
           ++P + K+TW    F++++ + + SD F V GY+WRI ++PKG      D LS+YL +  
Sbjct: 49  EDPPSLKFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKG---NNVDHLSMYLDVAD 108

Query: 146 LKELPKGSQVYIEWEMSVLSQFGVGHNKKTAHNRWLSSGGEYDDSWGVPRFMSLTDLMEP 205
              LP G   Y ++ ++V++Q    +N+ +            +  WG   FM L++L EP
Sbjct: 109 AANLPYGWSRYSQFSLAVVNQV---NNRYSIRKETQHQFNARESDWGFTSFMPLSELYEP 168

Query: 206 TKGFIYNDTLIVEAKINVVSTL 228
           T+G++ NDT+++EA++ V   L
Sbjct: 169 TRGYLVNDTVLIEAEVAVRKVL 184

[Close]

BLAST of MS018732.1 vs. ExPASy Swiss-Prot
Match: Q9M2J5 (MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis thaliana OX=3702 GN=At3g58210 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 8.0e-14
Identity = 39/139 (28.06%), Postives = 75/139 (53.96%), Query Frame = 0


Query: 89  INYKYTWKTKNFSQMDKKMYESDPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDSLKE 148
           ++ K+TW  +NFS    ++  S+ F + G +WR+ +YP+G  K + D LSL+L +   + 
Sbjct: 5   VDNKFTWVIQNFSSSQSRVVPSNQFVIGGCKWRLLVYPEGFNK-SGDHLSLFLEVADPRS 64

Query: 149 LPKGSQVYIEWEMSVLSQFGVGHNKKTAHNRWLSSGGEYDDSWGVPRFMSLTDLMEPTKG 208
           LP G   +  + +++++Q     +K+    +W +   +    WG+   + LT L     G
Sbjct: 65  LPPGWSRHARYLLTIVNQHSDKISKRNEATKWFN---QKIPGWGLSAMIPLTKLHAKDGG 124

Query: 209 FIYNDTLIVEAKINVVSTL 228
           F+ ND L + A++NV+  +
Sbjct: 125 FLVNDELKIVAEVNVLEVI 139

[Close]

BLAST of MS018732.1 vs. ExPASy Swiss-Prot
Match: Q9M2H5 (MATH domain and coiled-coil domain-containing protein At3g58410 OS=Arabidopsis thaliana OX=3702 GN=At3g58410 PE=4 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 2.0e-12
Identity = 40/136 (29.41%), Postives = 69/136 (50.74%), Query Frame = 0


Query: 89  INYKYTWKTKNFSQMDKKMYESDPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDSLKE 148
           +  K+ W  KNFS +  K + S PF +   +WR+ +YPKG      D+LSL+L +   K 
Sbjct: 5   VGKKFAWVIKNFSSLQCKKFYSVPFQIGDCKWRLSIYPKG---NNCDYLSLFLEVADFKS 64

Query: 149 LPKGSQVYIEWEMSVLSQFGVGHNKKTAHNRWLSSGGEYDDSWGVPRFMSLTDLMEPTKG 208
           LP G + Y++  + ++ Q      K    +RW     +    WG    + LT L +  +G
Sbjct: 65  LPSGWRRYVKLRLYIVKQLSTLIRKT---HRWFD---QEMWGWGFLYMLPLTKLHDEKEG 124

Query: 209 FIYNDTLIVEAKINVV 225
           F+ N  L++ A+++ +
Sbjct: 125 FLVNGELMIVAEVDAL 131

[Close]

BLAST of MS018732.1 vs. ExPASy Swiss-Prot
Match: Q9M2I0 (MATH domain and coiled-coil domain-containing protein At3g58360 OS=Arabidopsis thaliana OX=3702 GN=At3g58360 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.5e-12
Identity = 40/136 (29.41%), Postives = 64/136 (47.06%), Query Frame = 0


Query: 92  KYTWKTKNFSQMDKKMYESDPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDSLKELPK 151
           K TW  +NFS +  K   SDPF V G +WR  +YPKG      D+L LYL +   + L  
Sbjct: 8   KITWAIENFSSLHSKKIYSDPFIVGGCKWRFLVYPKG---NNVDYLFLYLEVADYESLSP 67

Query: 152 GSQVYIEWEMSVLSQFGVGHNKKTAHNRWLSSGGEYDDSWGVPRFMSLTDLMEPTKGFIY 211
             + +  + ++V++Q  V  +K+    +W          WG      L ++     GF+ 
Sbjct: 68  EWRRHARYLLNVVNQNSVKRSKQNEEQKWFD---VQSPRWGRLSMFPLNEINAKDSGFLV 127

Query: 212 NDTLIVEAKINVVSTL 228
           N  L + A+I V+  +
Sbjct: 128 NGELKIVAEIEVLEVI 137

[Close]

BLAST of MS018732.1 vs. ExPASy TrEMBL
Match: A0A6J1CX47 (probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX=3673 GN=LOC111015608 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 6.9e-85
Identity = 168/279 (60.22%), Postives = 187/279 (67.03%), Query Frame = 0


Query: 1   RDEKPIHYTLQIQSFSLLKAALASSNRDRYESQIFNAG---------------------- 60
           RDEKP+HYTLQIQSFSLLKAALASSNRDRYESQIFNAG                      
Sbjct: 13  RDEKPLHYTLQIQSFSLLKAALASSNRDRYESQIFNAGGYKWKLAVYPNGDVKRNGADHI 72

Query: 61  ---------------------------EWGFEKLISLDTFNDSSNGFLVDDCCAFGVDVV 120
                                      EWGFEKLISLDTFNDSSNGF+V DCC FGVDVV
Sbjct: 73  SLYLVKADDDINPCSHGKVRRFHAMKAEWGFEKLISLDTFNDSSNGFVVGDCCGFGVDVV 132

Query: 121 VMKCDGKGEALSLIKEPINYKYTWKTKNFSQMDKKMYESDPFTVEGYRWRIWLYPKGCPK 180
           VMKCDGKGE +S IKEP ++KYTWKTKNFSQ+DKK YESDPFTVEGYRW++WLYPKG  K
Sbjct: 133 VMKCDGKGEVVSFIKEPKSHKYTWKTKNFSQLDKKFYESDPFTVEGYRWKLWLYPKGSSK 192

Query: 181 ATTDFLSLYLGLDSLKELPKGSQVYIEWEMSVLSQFGVGHNKKTAHNRWLSSGG-EYDDS 230
           A T FLSLYL  +S +E+P+GSQVY+E+E S              HN W   GG E    
Sbjct: 193 AKTGFLSLYLSYNSYEEIPQGSQVYVEYEDS--------------HNCWFGFGGVESGRG 252

[Close]

BLAST of MS018732.1 vs. ExPASy TrEMBL
Match: A0A6J1CZF3 (uncharacterized protein LOC111015606 OS=Momordica charantia OX=3673 GN=LOC111015606 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 5.0e-75
Identity = 143/192 (74.48%), Postives = 151/192 (78.65%), Query Frame = 0


Query: 39  EWGFEKLISLDTFNDSSNGFLVDDCCAFGVDVVVMKCDGKGEALSLIKEPINYKYTWKTK 98
           EWGFEKLISLD F++ SNGFLVDDCCAFGVD++VMKCDGKGE                  
Sbjct: 74  EWGFEKLISLDNFSNPSNGFLVDDCCAFGVDIIVMKCDGKGERA---------------- 133

Query: 99  NFSQMDKKMYESDPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDSLKELPKGSQVYIE 158
                          T+ G     WLYPKGCPKATTDFLSLYLGLDSLK+LPKGSQVYIE
Sbjct: 134 ---------------TIGG-----WLYPKGCPKATTDFLSLYLGLDSLKDLPKGSQVYIE 193

Query: 159 WEMSVLSQFGVGHNKKTAHNRWLSSGGEYDDSWGVPRFMSLTDLMEPTKGFIYNDTLIVE 218
           WEMSVLSQFGVGHNKKTAHNRWLSSGGEY+DSWGVPRFMSL+DLMEPTKGFIYNDTLIVE
Sbjct: 194 WEMSVLSQFGVGHNKKTAHNRWLSSGGEYEDSWGVPRFMSLSDLMEPTKGFIYNDTLIVE 229

Query: 219 AKINVVSTLKEF 231
           AKINVVSTLKEF
Sbjct: 254 AKINVVSTLKEF 229

[Close]

BLAST of MS018732.1 vs. ExPASy TrEMBL
Match: A0A6J1CZF7 (uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015610 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.5e-63
Identity = 146/299 (48.83%), Postives = 171/299 (57.19%), Query Frame = 0


Query: 1   RDEKPIHYTLQIQSFSLLKAALASSNRDRYESQIFNAG---------------------- 60
           RDEKP+HYTLQIQ FSLLK ALA+S+RDRYES IF+                        
Sbjct: 58  RDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHI 117

Query: 61  ------------------------------------------------EWGFEKLISLDT 120
                                                           EWGFEKL+SL+T
Sbjct: 118 SLYLVTAEDDIPTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLET 177

Query: 121 FNDSSNGFLVDDCCAFGVDVVVMKCDGKGEALSLIKEPINYKYTWKTKNFSQMDKKMYES 180
           FNDSSNGFLVDDCCAFGVD+ VMKCDGKGEALSLIK+P N KYTWKT NFSQ+D+ M   
Sbjct: 178 FNDSSNGFLVDDCCAFGVDIFVMKCDGKGEALSLIKQPKNNKYTWKTNNFSQLDENM--- 237

Query: 181 DPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDSLKELPKGSQVYIEWEMSVLSQFGVG 230
                     ++ LYPKG PKA+ D+LSL+L  +SLKELP+G +VY E+E++VLS++   
Sbjct: 238 ----------KMSLYPKGSPKASPDYLSLFLRCESLKELPQGCRVYAEFEIAVLSKY--- 297

[Close]

BLAST of MS018732.1 vs. ExPASy TrEMBL
Match: A0A6J1CZ69 (ubiquitin carboxyl-terminal hydrolase 13-like OS=Momordica charantia OX=3673 GN=LOC111015609 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 2.0e-60
Identity = 146/300 (48.67%), Postives = 161/300 (53.67%), Query Frame = 0


Query: 1   RDEKPIHYTLQIQSFSLLKAALASSNRDRYESQIFNAG---------------------- 60
           RDEKP+HYTLQIQSFSLLK ALA+SN DRYESQIFNAG                      
Sbjct: 22  RDEKPLHYTLQIQSFSLLKTALAASNCDRYESQIFNAGGYKWKLAVYPNGDVKRNGSDHI 81

Query: 61  ------------------------------------------------EWGFEKLISLDT 120
                                                           EW FEKLISL+T
Sbjct: 82  SLYLVKAEDGIPTSEVNVVFTFLVYDNLNDKYLAVQDEKVRRFHSIQTEWEFEKLISLET 141

Query: 121 FNDSSNGFLVDDCCAFGVDVVVMKCDGKGEALSLIKEPINYKYTWKTKNFSQMDKKMYES 180
           FNDSSNGFLV DCCAFGVD+VV KCDGKGE +S IKEP N +YTWKT NFSQ+DK MYES
Sbjct: 142 FNDSSNGFLVGDCCAFGVDIVVKKCDGKGEVVSFIKEPKNNEYTWKTNNFSQLDKNMYES 201

Query: 181 DPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDSLKELPKGSQVYIEWEMSVLSQFGVG 231
           DPFTVEGYR                           KELP+GSQVY E+E++VLS++   
Sbjct: 202 DPFTVEGYR-------------------------CFKELPQGSQVYTEFEIAVLSKY--- 261

[Close]

BLAST of MS018732.1 vs. ExPASy TrEMBL
Match: A0A1S3CQ20 (uncharacterized protein LOC103503506 OS=Cucumis melo OX=3656 GN=LOC103503506 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.4e-53
Identity = 131/304 (43.09%), Postives = 162/304 (53.29%), Query Frame = 0


Query: 1   RDEKPIHYTLQIQSFSLLKAALASSNRDRYESQIFNAG---------------------- 60
           R EKPIHY L+IQSFSLLK A+ASS   R+ESQ F AG                      
Sbjct: 37  RYEKPIHYILKIQSFSLLKEAVASSPCQRFESQKFYAGGSEWKLALYPNGDRRRDVSDHI 96

Query: 61  --------------------------------------------------EWGFEKLISL 120
                                                             EWG EKL+ L
Sbjct: 97  SLYLVRVENNILSTTSEVNVVFTFLVYDTLRGKYLTVQDEKMRQFSATKREWGIEKLLPL 156

Query: 121 DTFNDSSNGFLVDDCCAFGVDVVVMKCD-GKGEALSLIKEPINYKYTWKTKNFSQ-MDKK 180
           +TF+D+SNGFLVDDCC FGVD+ VM C+  KGE  SLIK+P NYKYTWK  NFS+ +D  
Sbjct: 157 NTFSDASNGFLVDDCCVFGVDIFVMNCNVEKGEVFSLIKQPNNYKYTWKLDNFSKLLDCS 216

Query: 181 MYESDPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDSLKELPKGSQVYIEWEMSVLSQ 230
            +E + F VE   W+I L+P G  +A   F S+YL L +L   PKG+QVY+E+EM+VLSQ
Sbjct: 217 FWECNSFRVENCWWKIRLFPSGDWQAKPGFFSMYLMLSNLIAHPKGAQVYVEYEMAVLSQ 276

[Close]

BLAST of MS018732.1 vs. TAIR 10
Match: AT3G17380.1 (TRAF-like family protein )

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-31
Identity = 72/219 (32.88%), Postives = 122/219 (55.71%), Query Frame = 0


Query: 15  FSLLKAALASSNRDRY-----ESQIFNA--GEWGFEKLISLDTFNDSSNGFLVDDCCAFG 74
           +++ +  L   N+D Y       + F++   EWGF+K I   TF+D+SNG+L++D C FG
Sbjct: 89  YAVFRLYLLDQNKDNYLILQGNERRFHSVKREWGFDKFIPTGTFSDASNGYLMEDTCMFG 148

Query: 75  VDVVVMK--CDGKGEALSLIKEPINYKYTWKTKNFSQMDKKMYESDPFTVEGYRWRIWLY 134
            DV V K    G+GE LS+IK+  + K+ WK +NFS++DK+ Y+S+ F     +W+I  Y
Sbjct: 149 ADVFVSKERRSGRGECLSMIKDATSSKHVWKIENFSKLDKESYDSNAFFAGDRKWKIEFY 208

Query: 135 PKGCPKATTDFLSLYLGLDSLKELPKGSQVYIEWEMSVLSQFGVGHNKKTAHNRWLS-SG 194
           P G  + T   LS+YL L   + +  G+++++E+ + +  Q   G +      +W S S 
Sbjct: 209 PTGTKQGTGTHLSIYLTLVDPETISDGTKIFVEFTIRIFDQL-QGRHIAGKVTKWFSRSS 268

Query: 195 GEYDDSWGVPRFMSLTDLMEPTKGFIYNDTLIVEAKINV 224
            E+    G  +++S+    +P  G +  D  +VEA + V
Sbjct: 269 SEH----GWVKYVSMVYFTQPNSGLLLKDVCLVEADVCV 302

[Close]

BLAST of MS018732.1 vs. TAIR 10
Match: AT3G20370.1 (TRAF-like family protein )

HSP 1 Score: 123.6 bits (309), Expect = 2.0e-28
Identity = 62/192 (32.29%), Postives = 104/192 (54.17%), Query Frame = 0


Query: 40  WGFEKLISLDTFNDSSNGFLVD-DCCAFGVDVVVMKCDGKGEALSLIKEPINYKYTWKTK 99
           WGF +++ +DTF D + G+L D D C FGVDV +     K E  S+ +  +N ++TW  +
Sbjct: 187 WGFSQVLPIDTFKDPTKGYLYDGDHCEFGVDVTMPSLYEKSELFSVTENFLNPRFTWTIR 246

Query: 100 NFSQMDKKMYESDPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDSLKELPKGSQVYIE 159
            FS + K  Y S+ F++ G  W I + P G        LS+YLGL+  +      ++Y+ 
Sbjct: 247 GFSTLLKNSYLSEVFSIGGRSWNIQINPSGLGTGEGKALSMYLGLNVNEIFRPYEKIYVR 306

Query: 160 WEMSVLSQFGVGHNKKTAHNRWLSSGGEYDDSWGVPRFMSLTDLMEPTKGFIYNDTLIVE 219
            ++  L+Q  +  N +   + W +  G  + SWG P F+    L + +KGF+ ND L+V+
Sbjct: 307 AKLRALNQLNLS-NIERELDIWYNGPGYGEYSWGFPEFIYFPYLTDSSKGFVKNDVLMVQ 366

Query: 220 AKINVVSTLKEF 231
            ++  +S+ K F
Sbjct: 367 VEMEAISSTKYF 377

[Close]

BLAST of MS018732.1 vs. TAIR 10
Match: AT3G22080.1 (TRAF-like family protein )

HSP 1 Score: 116.7 bits (291), Expect = 2.5e-26
Identity = 66/198 (33.33%), Postives = 109/198 (55.05%), Query Frame = 0


Query: 31  ESQIFNAGE--WGFEKLISLDTFNDSSNGFLVD-DCCAFGVDVVVMKCDGKGEALSLIKE 90
           ES++FNA    WG  +++ +DTF D  NG++ + D C FGVDV+V       E  +L + 
Sbjct: 449 ESKLFNAFRTIWGLAQVLPVDTFTDPKNGYIFEGDQCEFGVDVIVAAPPTNWEIHTLHEA 508

Query: 91  PINYKYTWKTKNFSQMDKKMYESDPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDSLK 150
               K+ W  KNFS+++  +Y S  F++   +W + LYPKG  K    +LSLYL LD  +
Sbjct: 509 LSQPKFFWTVKNFSELNNNVYTSGNFSMRERKWVLKLYPKGDVKGDRKWLSLYLYLDQSE 568

Query: 151 ELPKGSQVYIEWEMSVLSQFGVGHNKKTAHNRWLSSGGEYDDSWGVPRFMSLTDLMEPTK 210
            L +  +++++ ++ VL   G  H      + + SS    + +WG  +F+SL ++    K
Sbjct: 569 TLKESEKIFVQAQLRVLDPRGSNHVTHKISSWYTSS----NTAWGYRKFVSLAEI---PK 628

Query: 211 GFIYNDTLIVEAKINVVS 226
            ++  DTL V+  + VVS
Sbjct: 629 AYLDKDTLKVQIDVEVVS 639

[Close]

BLAST of MS018732.1 vs. TAIR 10
Match: AT3G20360.1 (TRAF-like family protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-22
Identity = 65/193 (33.68%), Postives = 99/193 (51.30%), Query Frame = 0


Query: 40  WGFEKLISLDTFNDSSNGFLVD-DCCAFGVDVVVMKCDGKGEALSLIKEPINYKYTWKTK 99
           WGF K++ L TFN+  NG+L D D C FGVDV++     K E  S+ K   + ++TW  +
Sbjct: 170 WGFSKVLPLITFNNLKNGYLYDVDHCEFGVDVIIPPFYEKSEVFSVTKSFPSPRFTWYIQ 229

Query: 100 NFSQMDKKMYESDPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGL---DSLKELPKGSQV 159
            +S +    Y S+ F + G  W + ++  G        LSLYL L   + LK  P   +V
Sbjct: 230 GYSTLPTD-YLSEEFIIGGKSWNLRIFKNGFGAFEGKNLSLYLNLGPQELLKAKPY-DKV 289

Query: 160 YIEWEMSVLSQFGVGHN--KKTAHNRWLSSGGEYDDSWGVPRFMSLTDLMEPTKGFIYND 219
           Y+  ++ V +QFG   N   +   + W S        WG   FM L+DL   +KGF+ ND
Sbjct: 290 YVRAKLRVPNQFGSQSNLVLERPLDNWFS---PQTIGWGYADFMPLSDLRNSSKGFLVND 349

Query: 220 TLIVEAKINVVST 227
            L+V+  +  +S+
Sbjct: 350 MLVVQVAMEEISS 357

[Close]

BLAST of MS018732.1 vs. TAIR 10
Match: AT5G06600.1 (ubiquitin-specific protease 12 )

HSP 1 Score: 100.5 bits (249), Expect = 1.8e-21
Identity = 48/142 (33.80%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 86  KEPINYKYTWKTKNFSQMDKKMYESDPFTVEGYRWRIWLYPKGCPKATTDFLSLYLGLDS 145
           ++P   K+TW   NFS+ + + + SD F V GY+WRI ++PKG      D LS+YL +  
Sbjct: 50  EDPPTLKFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKG---NNVDHLSMYLDVSD 109

Query: 146 LKELPKGSQVYIEWEMSVLSQFGVGHNKKTAHNRWLSSGGEYDDSWGVPRFMSLTDLMEP 205
              LP G   Y ++ ++V++Q    H + T            +  WG   FM L++L +P
Sbjct: 110 AASLPYGWSRYAQFSLAVVNQI---HTRYTVRKETQHQFNARESDWGFTSFMPLSELYDP 169

Query: 206 TKGFIYNDTLIVEAKINVVSTL 228
           ++G++ NDT++VEA++ V   L
Sbjct: 170 SRGYLVNDTVLVEAEVAVRKVL 185

The following BLAST results are available for this feature:

BLAST of MS018732.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146380.1	1.4e-84	60.22	probable inactive serine/threonine-protein kinase fnkC [Momordica charantia]	[more]
XP_022146377.1	1.0e-74	74.48	uncharacterized protein LOC111015606 [Momordica charantia]	[more]
XP_038875772.1	1.7e-69	48.51	uncharacterized protein LOC120068142 [Benincasa hispida]	[more]
XP_038874970.1	3.3e-65	47.37	uncharacterized protein LOC120067490 [Benincasa hispida]	[more]
XP_022146382.1	3.1e-63	48.83	uncharacterized protein LOC111015610 [Momordica charantia]	[more]

BLAST of MS018732.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FPT1	2.6e-20	33.80	Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 ...	[more]
Q84WU2	6.3e-19	32.39	Ubiquitin C-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 ...	[more]
Q9M2J5	8.0e-14	28.06	MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis t...	[more]
Q9M2H5	2.0e-12	29.41	MATH domain and coiled-coil domain-containing protein At3g58410 OS=Arabidopsis t...	[more]
Q9M2I0	7.5e-12	29.41	MATH domain and coiled-coil domain-containing protein At3g58360 OS=Arabidopsis t...	[more]

BLAST of MS018732.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CX47	6.9e-85	60.22	probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX...	[more]
A0A6J1CZF3	5.0e-75	74.48	uncharacterized protein LOC111015606 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1CZF7	1.5e-63	48.83	uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1CZ69	2.0e-60	48.67	ubiquitin carboxyl-terminal hydrolase 13-like OS=Momordica charantia OX=3673 GN=...	[more]
A0A1S3CQ20	1.4e-53	43.09	uncharacterized protein LOC103503506 OS=Cucumis melo OX=3656 GN=LOC103503506 PE=...	[more]

BLAST of MS018732.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17380.1	1.1e-31	32.88	TRAF-like family protein	[more]
AT3G20370.1	2.0e-28	32.29	TRAF-like family protein	[more]
AT3G22080.1	2.5e-26	33.33	TRAF-like family protein	[more]
AT3G20360.1	2.8e-22	33.68	TRAF-like family protein	[more]
AT5G06600.1	1.8e-21	33.80	ubiquitin-specific protease 12	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002083	MATH/TRAF domain	SMART	SM00061	math_3	coord: 92..202 e-value: 7.5E-10 score: 48.7
IPR002083	MATH/TRAF domain	PFAM	PF00917	MATH	coord: 98..223 e-value: 1.1E-13 score: 51.3
IPR002083	MATH/TRAF domain	PROSITE	PS50144	MATH	coord: 90..221 score: 31.436966
IPR002083	MATH/TRAF domain	PROSITE	PS50144	MATH	coord: 1..70 score: 9.472765
IPR002083	MATH/TRAF domain	CDD	cd00121	MATH	coord: 92..221 e-value: 1.15538E-26 score: 97.835
IPR008974	TRAF-like	GENE3D	2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	coord: 14..81 e-value: 3.7E-10 score: 41.9 coord: 89..228 e-value: 8.1E-34 score: 118.7
None	No IPR available	PANTHER	PTHR46162	TRAF-LIKE FAMILY PROTEIN	coord: 39..227
None	No IPR available	SUPERFAMILY	49599	TRAF domain-like	coord: 88..226
None	No IPR available	SUPERFAMILY	49599	TRAF domain-like	coord: 6..74

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS018732	MS018732	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS018732.1-cds	MS018732.1-cds-scaffold313:1551285..1551399	CDS
MS018732.1-cds	MS018732.1-cds-scaffold313:1561818..1562061	CDS
MS018732.1-cds	MS018732.1-cds-scaffold313:1565148..1565317	CDS
MS018732.1-cds	MS018732.1-cds-scaffold313:1565456..1565616	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS018732.1	MS018732.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding