MS017454.1 (mRNA) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTGAAAAAAGATTGTGTTTTTCTAAGGAAAGAAGAATTGAAGAAAGCAGTTTACTCTGTAGCCTTAAAGGGTAGTTTTCAGTTCAAAACAGTAAAATCCAACAAAAAACAACAAAAAACAGTTGGTTTTAAAGTGTCTAGACGAATCATGCAATTGGTACCTCCGTTCTTCTCGTTACTTAGATAGCAAAATATGGGCTATTAGGAAA CTGAAAAAAGATTGTGTTTTTCTAAGGAAAGAAGAATTGAAGAAAGCAGTTTACTCTGTAGCCTTAAAGGGTAGTTTTCAGTTCAAAACAGTAAAATCCAACAAAAAAAAAAAACAGTTGGTTTTAAAGTGTCTAGACGAATCATGCAATTGGTACCTCCGTTCTTCTCGTTACTTAGATAGCAAAATATGGGCTATTAGGAAA CTGAAAAAAGATTGTGTTTTTCTAAGGAAAGAAGAATTGAAGAAAGCAGTTTACTCTGTAGCCTTAAAGGGTAGTTTTCAGTTCAAAACAGTAAAATCCAACAAAAAAAAAAAACAGTTGGTTTTAAAGTGTCTAGACGAATCATGCAATTGGTACCTCCGTTCTTCTCGTTACTTAGATAGCAAAATATGGGCTATTAGGAAA LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK Homology
BLAST of MS017454.1 vs. NCBI nr
Match: KAA0065296.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 68.6 bits (166), Expect = 2.4e-08 Identity = 31/68 (45.59%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of MS017454.1 vs. NCBI nr
Match: KAA0054854.1 (uncharacterized protein E6C27_scaffold406G00610 [Cucumis melo var. makuwa]) HSP 1 Score: 67.0 bits (162), Expect = 7.1e-08 Identity = 30/68 (44.12%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of MS017454.1 vs. NCBI nr
Match: TYK22454.1 (uncharacterized protein E5676_scaffold3009G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 67.0 bits (162), Expect = 7.1e-08 Identity = 30/68 (44.12%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of MS017454.1 vs. NCBI nr
Match: KAA0066702.1 (uncharacterized protein E6C27_scaffold271G00350 [Cucumis melo var. makuwa]) HSP 1 Score: 66.6 bits (161), Expect = 9.3e-08 Identity = 30/68 (44.12%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of MS017454.1 vs. NCBI nr
Match: KAA0059897.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 66.6 bits (161), Expect = 9.3e-08 Identity = 30/68 (44.12%), Postives = 46/68 (67.65%), Query Frame = 0
BLAST of MS017454.1 vs. ExPASy TrEMBL
Match: A0A5A7VG38 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00100 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.2e-08 Identity = 31/68 (45.59%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of MS017454.1 vs. ExPASy TrEMBL
Match: A0A5D3DFS5 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3009G00020 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.4e-08 Identity = 30/68 (44.12%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of MS017454.1 vs. ExPASy TrEMBL
Match: A0A5A7UI69 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold406G00610 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.4e-08 Identity = 30/68 (44.12%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of MS017454.1 vs. ExPASy TrEMBL
Match: A0A5A7UZ18 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold108G001920 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 4.5e-08 Identity = 30/68 (44.12%), Postives = 46/68 (67.65%), Query Frame = 0
BLAST of MS017454.1 vs. ExPASy TrEMBL
Match: A0A5A7VQ50 (DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold179G00600 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 4.5e-08 Identity = 30/68 (44.12%), Postives = 47/68 (69.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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