MS013941.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS013941.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein yippee-like
Location	scaffold607: 1094080 .. 1097112 (-)
Sequence length	387
RNA-Seq Expression	MS013941.1
Synteny	MS013941.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGCTATTTCTGATTACTCTGGAAGGAAACGTTTATAGTTGCAAACACTGTAAAATTCACCTTGCCCTTTCGAAAGACATAATTTCAAAGGTATTTAATCCTATTCCTCGATGCCACATGAAAATTTGAGTAGCGCACAAGTTTCTGTTCTGCTGATATCTTGTTGCAGTTTGTTAATTCTCTTATTGAGTTGTTTGATGGAGGTTTAACAGTAAGGTGCATGAGGAGAGGAACTATTTATTAAGAGTGTTTGTTTCGGTTTAGTAAAAGGAAATCGGTCTCTAGAAGAGGAAGAATCATTAGTACACTAAAAGTTTGATTTAGGAAAAAGTATTTATTGCTTTGGGACCACGCATGCGTATTGAGAATTTTGATACCTCGCTATGGAAAGGTCCTTGAACTTTTAGTTTAAATTTAAAAACTAGGAATTCTGAGAATTGAGAAAGTTGTTCTTGTTTTAATCCCTAATCCTGTCTTGACTTTTTGCTTGAATTGCTTAATTTGTGTTGTATGAGTCCCAAAATACTGCTTCCTGAATTGAAGTATCTCGTTTCATTGCTAAATAAGTTGTTCATTCGTTGAGTGACTTACATAACCACATTTTTGATCGATAGATTTAAGGGTGGAATTTGTTTTGAAGCGTTAATGTGGTAAATCCTTGCTCAGATGGTCATTGATTTTACCATACTTATCAGAAATATCAGGTGTTTGATTAGCTATAATAAGGAATGTAACTGAATGCTCATTCATTCAAGTATTTATACGATTTCCTTGTACAATNAATTTTTTTTTTTTTTTTTTTTTTTTTTCTGAAGGCTCCATCCATCCTTATTATATCATGTCAATTCTAAGTTATTTTAGTTATATGGGTGGTATGAATTTAAGACTTTTGGCTGATGAATATGTTTGGTACTTTGTGGACTTTTCTGCTTTCACATGCAATAGGATCCTCATGTGGCTCTGCTGAGGCGCCATCAGAATCTGTGTTTATTGTATAAAATAGTTTGTCAATCTCAGCATTGGCATTTTCATGTCATGTATTAGATTGTTCCTTATTTCGAGAAAGGCTCATTTATATGTATTGTTACTCGTACTTCCAGTTTTTACCTTTTTGATATTTAAGATTAAGATGCTAAAGGCCCTATTTGTGCCAGTGAATCCCATACCATTTAAGAGAGATGCAAGGCTTTCTCAATATCACGACTACTTCCTAACATCATAAAAGAATTTGTTCCCAAGGATTTTCTTTTTCTCATTTAAATTCACTCCCCTATTCCTTTTTTCCACATCTGTTAATAGCATCAGAAATATACATGGATATACTAATATAATTCTGCTTTGATTTTGTTTCAGACTTTTCACTGCAGGCATGGAAGGGCATATTTGTTTGATAACGTGTGAGTATTACATTTTCACCTTTATGATTATGTTTCGAGTTAAACTACCATGGATTGGCCAATAGCTTAGTTGGTAGAGCATTGGGCTTTAACCTAATGGTTGCAGGTTTAAGTCTGGCTATACCCAAACCTACCTTACACGAGACTATTTTGAAGGATGCATAGTAACATTCAAAGATCACTCTTTGACCTTTATATTCATTTCTCGGCAATGAAGGTAAGTAAGGAAATAAAGAGATTTAGAGGTAATTGGTTCAAACCTCAGAGTGGCTAGGATACTAATATCTTACAAGGTCATACTGTTGTTTCTTAAAATTTAAGATTAATTGAAGTTTGTGCAAGCAAGCTCGAGAACACTCACAGATATTAAAAAATATCGGAGTCACAGATACGTAGGCATTTAGATTCATCTGATTGGCAGGACCTACTAAAAAGAAAGAAAAGAAGAAAAATATTGGCATGAATAGAATGGTCCTATTTTAAATCAAACTTTTTCTATTTGAATTTTGAACTTTATTTAGATGGCTTCACTGTCCTTTGTTAAGCTAATTGCTGGAACAAGAATATTACCGCTGCTTTAGATCATGGAAGTAGTTGCCTATATCTTCCTATGCGTATACTTATAGCTTTCTATGATTTGCGCTTGCCTTGTCATAATTGAAATCCTTCCTGCAGGAATGGGGTATGGGCCTTTCTTAGTAGTTAGTATGAAAAATTAACTAACTGCTGCCCCATATAAAAGCTCGATCTTTAGAATGAAAAATGATCCCTGGTATCTGACTAGACATGTTTCGCCCGTTAGATTTTGTTTCTGAACCCTTGTGGACAATGTTCACATAAGAATTAGATCGGCACTTCAAACGGTCTTTATTTCGTAGGCAGCCGTGTAGTGATCCATACTGGCTAGTGCCATACTCATCATACCTTCGGTTAACATTTTGATTTTCATAATGCATGGCAGTGTTAATGTCACGATTGGAGAACAAGAAGAGCGGATGATGATCACAGGATTGCACACTGTTGTTGACATATTTTGTGTTGGTTGTGGCTCAATTCTTGGCTGGAAATATGTAAGATCTTATTTTCTTTTTCTTTCTTCCTTCTTTTTACCTCCTGATTTTCCCAAATTGTTTCCTAATACATCCCTGGTAATTCCAGGACTTTGCCTATGACAAATCCCAGAAGTACAAGGAAGGGAAATTTATCCTTGAAATGTGAGGCTCAGGCCACTATACTTTGTAGTTTTCACATTATAAATCTTGGAAACCAGAATGAAAATTTGATTTATCGATAACATTCTCCACATCTCTCTGTTATATAGTTTGATTTTAAGCTGCGCATGAACATCAGGAAGGAATGATCTTGGTCAACTACCAAAGTCATTACACAATTTTGAATATTGAATACTATTTTGAATTTCCCATCTCCAAGTTCTGATACATCCAATGTTTGTGTAAATACTGATGCGAAGAGTTTTCCCCTTTATATATTTTTCGACCAGAACATAATTCTCGACTCCGTTTTGCTTCTTTGGAAATAATTTTGCAGGTTCAAGGTGTTGAGTCCTGATGGAAGCGGTTACATAGCAAGTCATGATCTGCAGCTTGCAGGGAGCGATGGCGACGATGCT

mRNA sequence

ATGGGAAGGCTATTTCTGATTACTCTGGAAGGAAACGTTTATAGTTGCAAACACTGTAAAATTCACCTTGCCCTTTCGAAAGACATAATTTCAAAGACTTTTCACTGCAGGCATGGAAGGGCATATTTGTTTGATAACGTTGTTAATGTCACGATTGGAGAACAAGAAGAGCGGATGATGATCACAGGATTGCACACTGTTGTTGACATATTTTGTGTTGGTTGTGGCTCAATTCTTGGCTGGAAATATGACTTTGCCTATGACAAATCCCAGAAGTACAAGGAAGGGAAATTTATCCTTGAAATGTTCAAGGTGTTGAGTCCTGATGGAAGCGGTTACATAGCAAGTCATGATCTGCAGCTTGCAGGGAGCGATGGCGACGATGCT

Coding sequence (CDS)

ATGGGAAGGCTATTTCTGATTACTCTGGAAGGAAACGTTTATAGTTGCAAACACTGTAAAATTCACCTTGCCCTTTCGAAAGACATAATTTCAAAGACTTTTCACTGCAGGCATGGAAGGGCATATTTGTTTGATAACGTTGTTAATGTCACGATTGGAGAACAAGAAGAGCGGATGATGATCACAGGATTGCACACTGTTGTTGACATATTTTGTGTTGGTTGTGGCTCAATTCTTGGCTGGAAATATGACTTTGCCTATGACAAATCCCAGAAGTACAAGGAAGGGAAATTTATCCTTGAAATGTTCAAGGTGTTGAGTCCTGATGGAAGCGGTTACATAGCAAGTCATGATCTGCAGCTTGCAGGGAGCGATGGCGACGATGCT

Protein sequence

MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMMITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQLAGSDGDDA

Homology

[Close]

BLAST of MS013941.1 vs. NCBI nr
Match: XP_022151597.1 (protein yippee-like [Momordica charantia])

HSP 1 Score: 271.2 bits (692), Expect = 4.7e-69
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM
Sbjct: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ
Sbjct: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120

Query: 121 LAGSDGDDA 130
           LAGSDGDDA
Sbjct: 121 LAGSDGDDA 129

[Close]

BLAST of MS013941.1 vs. NCBI nr
Match: XP_038883190.1 (protein yippee-like [Benincasa hispida] >XP_038883191.1 protein yippee-like [Benincasa hispida] >XP_038883192.1 protein yippee-like [Benincasa hispida])

HSP 1 Score: 248.4 bits (633), Expect = 3.3e-62
Identity = 115/129 (89.15%), Postives = 122/129 (94.57%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRLF ITLEGN YSCKHCK HLALSKDIIS+TFHCRHGRAYLF+NVVNVT+GEQEERMM
Sbjct: 1   MGRLFFITLEGNCYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           ITGLHTVVDIFCVGCGSILGWKY+ AYDKSQKYKEGK+ILEMFKVL PDG+ Y+ASHD Q
Sbjct: 61  ITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGNSYLASHDPQ 120

Query: 121 LAGSDGDDA 130
           LAGSDGDDA
Sbjct: 121 LAGSDGDDA 129

[Close]

BLAST of MS013941.1 vs. NCBI nr
Match: XP_004147886.1 (protein yippee-like [Cucumis sativus] >KGN54366.1 hypothetical protein Csa_017908 [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 1.1e-60
Identity = 111/127 (87.40%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRLFLITL+GN YSCKHCK HLALSKDIIS+TF+CRHGRAYLF+NVVNVT+GEQEERMM
Sbjct: 1   MGRLFLITLDGNFYSCKHCKTHLALSKDIISRTFYCRHGRAYLFNNVVNVTVGEQEERMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           ITGLHTVVDIFCVGCGSI+GWKY+ AYDKSQKYKEGK+ILEMFKVL+PDG+GY+ASHD Q
Sbjct: 61  ITGLHTVVDIFCVGCGSIIGWKYEVAYDKSQKYKEGKYILEMFKVLAPDGTGYLASHDPQ 120

Query: 121 LAGSDGD 128
           L GSDGD
Sbjct: 121 LVGSDGD 127

[Close]

BLAST of MS013941.1 vs. NCBI nr
Match: XP_016900459.1 (PREDICTED: LOW QUALITY PROTEIN: protein yippee-like [Cucumis melo])

HSP 1 Score: 241.1 bits (614), Expect = 5.2e-60
Identity = 110/129 (85.27%), Postives = 122/129 (94.57%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRLFL+ LEGN YSCKHCK HLALSKDIIS+TF+CRHGRAYLF++VVNV++GEQEERMM
Sbjct: 1   MGRLFLLXLEGNFYSCKHCKTHLALSKDIISRTFYCRHGRAYLFNDVVNVSVGEQEERMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           ITGLHTVVDIFCVGCGSI+GWKY+ AYDKSQKYKEGK+ILEMFKVL PDG+GY+ASHD Q
Sbjct: 61  ITGLHTVVDIFCVGCGSIIGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGTGYLASHDPQ 120

Query: 121 LAGSDGDDA 130
           L GSDGDDA
Sbjct: 121 LVGSDGDDA 129

[Close]

BLAST of MS013941.1 vs. NCBI nr
Match: XP_023543326.1 (protein yippee-like [Cucurbita pepo subsp. pepo] >XP_023543327.1 protein yippee-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.4 bits (594), Expect = 1.1e-57
Identity = 106/129 (82.17%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRL L TLEGN YSCKHCK HLAL KDIIS+TFHCRHG+AYLF+N+VNVT+GE E+RM+
Sbjct: 1   MGRLLLTTLEGNFYSCKHCKTHLALQKDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           ITGLHTVVDIFCVGCGSILGWKY+ A+DKSQKYKEGK+ILEM KVL PDG+ Y+ASHD Q
Sbjct: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKYKEGKYILEMLKVLGPDGNSYLASHDPQ 120

Query: 121 LAGSDGDDA 130
           LAGSDGDDA
Sbjct: 121 LAGSDGDDA 129

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BLAST of MS013941.1 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 4.6e-51
Identity = 90/128 (70.31%), Postives = 108/128 (84.38%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRLF++TLEG +YSCKHC  HLALS++I+SK+FHC+HG+AYLF  VVNVT GE E RMM
Sbjct: 1   MGRLFVLTLEGKIYSCKHCGTHLALSENIVSKSFHCKHGKAYLFSKVVNVTSGEIENRMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           +TG+HTV DIFCV CGSI+GWKY+ A++KSQKYKEGK +LE FK+  PDGS Y ASHD  
Sbjct: 61  MTGMHTVADIFCVCCGSIVGWKYETAHEKSQKYKEGKSVLERFKITGPDGSHYWASHDTH 120

Query: 121 LAGSDGDD 129
           +AGSD DD
Sbjct: 121 VAGSDADD 128

[Close]

BLAST of MS013941.1 vs. ExPASy Swiss-Prot
Match: Q9SR97 (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 198.4 bits (503), Expect = 5.1e-50
Identity = 89/128 (69.53%), Postives = 107/128 (83.59%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRLF+I LEG VYSCK+C+ H A++ DIISK+FHC+HGRAYLFDNVVNVT+GE+E R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           ITG HTV DIFCV CGS++GWKY+ AYDKSQKYKEGKFILE FKVL P G GY  + +  
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVLGPYGGGYDMNQNEP 120

Query: 121 LAGSDGDD 129
           + GSD ++
Sbjct: 121 MTGSDDEE 128

[Close]

BLAST of MS013941.1 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-44
Identity = 79/129 (61.24%), Postives = 103/129 (79.84%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRLFL+ LEG  YSCKHCK +LAL  D++SK+F  RHG+AYLF  VVNV  G++E+RMM
Sbjct: 1   MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           +TG+HTVVDI+CV CGS +GWKY+FA++K+QKYKEGK +LE +KV  PDG+ Y  + +++
Sbjct: 61  MTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWGPDGNNYWVAQEVE 120

Query: 121 LAGSDGDDA 130
              SD DDA
Sbjct: 121 AGDSDTDDA 129

[Close]

BLAST of MS013941.1 vs. ExPASy Swiss-Prot
Match: Q9LY56 (Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.2e-44
Identity = 81/129 (62.79%), Postives = 104/129 (80.62%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGR+F++ LEGN+Y CK CK HL+  +DI+SK+F C++GRAYLF+NVVNV++GE+E+RMM
Sbjct: 1   MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           ITGLH VVDIFCVGCGS +GWKY+FA++KSQKYKEGK +LE++K+  P        HD  
Sbjct: 61  ITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKYKEGKSVLELYKISGP--------HDSN 120

Query: 121 LAGSDGDDA 130
              SDGDDA
Sbjct: 121 DLVSDGDDA 121

[Close]

BLAST of MS013941.1 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 6.7e-34
Identity = 58/106 (54.72%), Postives = 84/106 (79.25%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGR+F + LEG  Y C+ C+ HLAL  D++S++FHCR G+AYLF+  VN+++G  EER+M
Sbjct: 1   MGRIFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVL 107
           ++G+HTV DIFC  CG  +GWKY+ A++K+QKYKEGKF+LE  +++
Sbjct: 61  LSGMHTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIV 106

[Close]

BLAST of MS013941.1 vs. ExPASy TrEMBL
Match: A0A6J1DDY1 (Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111019496 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.3e-69
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM
Sbjct: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ
Sbjct: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120

Query: 121 LAGSDGDDA 130
           LAGSDGDDA
Sbjct: 121 LAGSDGDDA 129

[Close]

BLAST of MS013941.1 vs. ExPASy TrEMBL
Match: A0A0A0L2L2 (Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_4G308560 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.1e-61
Identity = 111/127 (87.40%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRLFLITL+GN YSCKHCK HLALSKDIIS+TF+CRHGRAYLF+NVVNVT+GEQEERMM
Sbjct: 1   MGRLFLITLDGNFYSCKHCKTHLALSKDIISRTFYCRHGRAYLFNNVVNVTVGEQEERMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           ITGLHTVVDIFCVGCGSI+GWKY+ AYDKSQKYKEGK+ILEMFKVL+PDG+GY+ASHD Q
Sbjct: 61  ITGLHTVVDIFCVGCGSIIGWKYEVAYDKSQKYKEGKYILEMFKVLAPDGTGYLASHDPQ 120

Query: 121 LAGSDGD 128
           L GSDGD
Sbjct: 121 LVGSDGD 127

[Close]

BLAST of MS013941.1 vs. ExPASy TrEMBL
Match: A0A1S4DWV3 (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103491186 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.5e-60
Identity = 110/129 (85.27%), Postives = 122/129 (94.57%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRLFL+ LEGN YSCKHCK HLALSKDIIS+TF+CRHGRAYLF++VVNV++GEQEERMM
Sbjct: 1   MGRLFLLXLEGNFYSCKHCKTHLALSKDIISRTFYCRHGRAYLFNDVVNVSVGEQEERMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           ITGLHTVVDIFCVGCGSI+GWKY+ AYDKSQKYKEGK+ILEMFKVL PDG+GY+ASHD Q
Sbjct: 61  ITGLHTVVDIFCVGCGSIIGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGTGYLASHDPQ 120

Query: 121 LAGSDGDDA 130
           L GSDGDDA
Sbjct: 121 LVGSDGDDA 129

[Close]

BLAST of MS013941.1 vs. ExPASy TrEMBL
Match: A0A6J1GG37 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111453845 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.5e-57
Identity = 105/129 (81.40%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRL L TLEGN YSCKHCK HLAL +DIIS+TFHCRHG+AYLF+N+VNVT+GE E+RM+
Sbjct: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           ITGLHTVVDIFCVGCGSILGWKY+ A+DKSQKYKEGK+ILEM KVL PDG+ Y+ASHD Q
Sbjct: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKYKEGKYILEMLKVLGPDGNSYLASHDPQ 120

Query: 121 LAGSDGDDA 130
           LAGSDGDDA
Sbjct: 121 LAGSDGDDA 129

[Close]

BLAST of MS013941.1 vs. ExPASy TrEMBL
Match: A0A6J1IPR3 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111478339 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 106/130 (81.54%), Postives = 118/130 (90.77%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRL L TLEGN YSCKHCK HLAL KDIIS+TFHCRHG+AYLF+N+VNVT+GE E+RM+
Sbjct: 1   MGRLLLTTLEGNFYSCKHCKTHLALQKDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           ITGLHTVVDIFCVGCGSILGWKY+ A+DKSQKYKEGK+ILEM KVL PDG+ Y+ASHD Q
Sbjct: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKYKEGKYILEMLKVLGPDGNSYLASHDPQ 120

Query: 121 LA-GSDGDDA 130
           LA GSDGDDA
Sbjct: 121 LAGGSDGDDA 130

[Close]

BLAST of MS013941.1 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 198.4 bits (503), Expect = 3.6e-51
Identity = 89/128 (69.53%), Postives = 107/128 (83.59%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRLF+I LEG VYSCK+C+ H A++ DIISK+FHC+HGRAYLFDNVVNVT+GE+E R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           ITG HTV DIFCV CGS++GWKY+ AYDKSQKYKEGKFILE FKVL P G GY  + +  
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVLGPYGGGYDMNQNEP 120

Query: 121 LAGSDGDD 129
           + GSD ++
Sbjct: 121 MTGSDDEE 128

[Close]

BLAST of MS013941.1 vs. TAIR 10
Match: AT3G08990.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 198.4 bits (503), Expect = 3.6e-51
Identity = 89/128 (69.53%), Postives = 107/128 (83.59%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRLF+I LEG VYSCK+C+ H A++ DIISK+FHC+HGRAYLFDNVVNVT+GE+E R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           ITG HTV DIFCV CGS++GWKY+ AYDKSQKYKEGKFILE FKVL P G GY  + +  
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVLGPYGGGYDMNQNEP 120

Query: 121 LAGSDGDD 129
           + GSD ++
Sbjct: 121 MTGSDDEE 128

[Close]

BLAST of MS013941.1 vs. TAIR 10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 194.9 bits (494), Expect = 4.0e-50
Identity = 86/130 (66.15%), Postives = 107/130 (82.31%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRLF++ LEG +YSCKHCK HLA  +DIISK+FHC+HG+AYLF+ V NV+IGE EER+M
Sbjct: 1   MGRLFVVNLEGKIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGY-IASHDL 120
           +TG HTV DIFCV CGSI+GWKY+ A++K+QKYKEGK +LE FK+  PDGS Y ++SH  
Sbjct: 61  MTGKHTVADIFCVSCGSIVGWKYETAHEKNQKYKEGKSVLERFKISGPDGSNYWVSSHGR 120

Query: 121 QLAGSDGDDA 130
            + GSD DDA
Sbjct: 121 HIGGSDADDA 130

[Close]

BLAST of MS013941.1 vs. TAIR 10
Match: AT3G11230.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 180.6 bits (457), Expect = 7.8e-46
Identity = 79/129 (61.24%), Postives = 103/129 (79.84%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRLFL+ LEG  YSCKHCK +LAL  D++SK+F  RHG+AYLF  VVNV  G++E+RMM
Sbjct: 1   MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           +TG+HTVVDI+CV CGS +GWKY+FA++K+QKYKEGK +LE +KV  PDG+ Y  + +++
Sbjct: 61  MTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWGPDGNNYWVAQEVE 120

Query: 121 LAGSDGDDA 130
              SD DDA
Sbjct: 121 AGDSDTDDA 129

[Close]

BLAST of MS013941.1 vs. TAIR 10
Match: AT3G11230.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 180.6 bits (457), Expect = 7.8e-46
Identity = 79/129 (61.24%), Postives = 103/129 (79.84%), Query Frame = 0


Query: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60
           MGRLFL+ LEG  YSCKHCK +LAL  D++SK+F  RHG+AYLF  VVNV  G++E+RMM
Sbjct: 34  MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 93

Query: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120
           +TG+HTVVDI+CV CGS +GWKY+FA++K+QKYKEGK +LE +KV  PDG+ Y  + +++
Sbjct: 94  MTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWGPDGNNYWVAQEVE 153

Query: 121 LAGSDGDDA 130
              SD DDA
Sbjct: 154 AGDSDTDDA 162

The following BLAST results are available for this feature:

BLAST of MS013941.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151597.1	4.7e-69	100.00	protein yippee-like [Momordica charantia]	[more]
XP_038883190.1	3.3e-62	89.15	protein yippee-like [Benincasa hispida] >XP_038883191.1 protein yippee-like [Ben...	[more]
XP_004147886.1	1.1e-60	87.40	protein yippee-like [Cucumis sativus] >KGN54366.1 hypothetical protein Csa_01790...	[more]
XP_016900459.1	5.2e-60	85.27	PREDICTED: LOW QUALITY PROTEIN: protein yippee-like [Cucumis melo]	[more]
XP_023543326.1	1.1e-57	82.17	protein yippee-like [Cucurbita pepo subsp. pepo] >XP_023543327.1 protein yippee-...	[more]

BLAST of MS013941.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59234	4.6e-51	70.31	Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9SR97	5.1e-50	69.53	Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 ...	[more]
Q9C777	1.1e-44	61.24	Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 ...	[more]
Q9LY56	3.2e-44	62.79	Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 ...	[more]
Q9FN32	6.7e-34	54.72	Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 ...	[more]

BLAST of MS013941.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDY1	2.3e-69	100.00	Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111019496 PE=3 SV=1	[more]
A0A0A0L2L2	5.1e-61	87.40	Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_4G308560 PE=3 SV=1	[more]
A0A1S4DWV3	2.5e-60	85.27	Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103491186 PE=3 SV=1	[more]
A0A6J1GG37	1.5e-57	81.40	Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111453845 PE=3 SV=1	[more]
A0A6J1IPR3	1.3e-56	81.54	Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111478339 PE=3 SV=1	[more]

BLAST of MS013941.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08990.1	3.6e-51	69.53	Yippee family putative zinc-binding protein	[more]
AT3G08990.2	3.6e-51	69.53	Yippee family putative zinc-binding protein	[more]
AT2G40110.1	4.0e-50	66.15	Yippee family putative zinc-binding protein	[more]
AT3G11230.1	7.8e-46	61.24	Yippee family putative zinc-binding protein	[more]
AT3G11230.2	7.8e-46	61.24	Yippee family putative zinc-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004910	Yippee/Mis18/Cereblon	PFAM	PF03226	Yippee-Mis18	coord: 13..105 e-value: 1.0E-16 score: 61.0
None	No IPR available	PANTHER	PTHR13848:SF80	PROTEIN YIPPEE-LIKE	coord: 1..125
IPR039058	Yippee family	PANTHER	PTHR13848	PROTEIN YIPPEE-LIKE CG15309-RELATED	coord: 1..125
IPR034751	Yippee domain	PROSITE	PS51792	YIPPEE	coord: 12..109 score: 49.995506

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS013941	MS013941	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS013941.1-cds	MS013941.1-cds-scaffold607:1094080..1094161	CDS
MS013941.1-cds	MS013941.1-cds-scaffold607:1094496..1094551	CDS
MS013941.1-cds	MS013941.1-cds-scaffold607:1094640..1094748	CDS
MS013941.1-cds	MS013941.1-cds-scaffold607:1095710..1095753	CDS
MS013941.1-cds	MS013941.1-cds-scaffold607:1097017..1097112	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS013941.1	MS013941.1-protein	polypeptide