MS012102.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS012102.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	INO80 complex subunit B
Location	scaffold708: 332608 .. 335111 (+)
Sequence length	1719
RNA-Seq Expression	MS012102.1
Synteny	MS012102.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGTTTGGCCCTTCGGGGGTTTATGGAACCTCAACTATGAGGAGGAAAAGGAGTCGAACTTCCCGTCGACCTCGACTTGAGTCACAGCAATTTGCCGAAGGTCTTGATCCTTCACCTTCATCATCAACACCGCCTTCTGATGATGCAGTCAAGTTCTCCAGTGATGAGAATGGTGGTGGTGATGGTAATTCTAGAAGAAAAGAATTAAGCCTCAATCAATGTGTATCTAGAGGCTCGTCTGCTAGTGGGGCTGAAAGTGAACAATTTCTTAAAAGAAGCAAAAAGGATGGAAGTTTTAATTCATATTACCGTAGTGAACCCGGACGGAGTGCTAATGATAACAAACGCAGCAGCGAAGGTGTCCTTGCTCCTGCTAATTGGAGAAGCACCAGCAAGGTGTCAGATGGCATCGAATCGGAGTCGAGCAGCATTGATCCATACGGTGGAAGGTATGGTGGCGAAAGTTCAAGTTCTGGACAGAAAGGACTTTTCGTTGAAGGATTGGGAAATGATAACAAGGTTAAGAAGGTTAAGCTTAAGGTTGGTGGGGTCACTCGCACTATTCAAGCCCCGTCCCCTCCCAATGGTGCATCGAAAGGCAGTGGTTCAACGAAGAACTCTCATCCTTCAGATGTTCATAGGCAGCAACACAAGCAGAACTTTCAGGTACTAGCCTCTGTTTTGCTAGTCGGTGAACCGATATTACCCTTATTCCTTGTTTTCTCTCTGCATATGTTCCATTTGGTTTATGTGGTTGGTTTCTGAATAATGAAGTTATAAATAATATTGATAGTAAATTTGATGACAACGTTCTTTTGCCAAAGCAATAATCCTGTGGTATGAGAATTTGCCATTTTGTTTTTGTTTGATAGGACTCAATCGACTTATAACCATTACTCATATGGAAATTTATGTTAGTGCTATCACGTTAAGTTGTAATGATATAAATTCTCGCGTTGCACAGAAACAGTTGAGACTGATTATAGTATCCTCTCTAATGTGTTCCGAATGCAGGAAAACTATAATGGAAATCATTCCCCTTCAGACAAAAGGAGTGGATTGCATGGAATTCCATGGAGAGACTTCTCAAAAGGCGGTTTTGGTGTCGAGAAGGAGGAGCCTTTGACAGGGAAGGTGTCTGGTAGGAATTCTTCTGGGAAGCTTGGAGAGTCACTTCGGAAGAGCAAAAGAGCCTCAAAGAAACGTGTTCTTGATGGGGAATTTGATGACGATGATGAAGATGAGGAAATACGGTATTTGGAGAAGCTCAAAACGTCGAGGGCTTCTGTAGGGTACCGTGAAGATGGTGAAGGACCAACCAAGAAGCAGCGGAAACTTTCTAGCATTTCTAGCATGGAGAATTATGGTGCATCAAAGCATGACAAAGATTATGAGGAAGAAGAAGATTCAGCATCTGAGGGTGATGTCGAAGTTAATCATAAAAAGCAAAGGAAGGAATCTATTGACGTGTTGATGGATGGTAAGCGAGAAATGACTCTCACCACACGTCAAAGAGCTCTTCAGTCTAGCAAAGATGCATCGTCTGCTCGAGGTGCTAGTTTAATTGAATTTCCAAACGGTTTACCGCCTGCTCCACCCAGAAGTAAGCAACTATATCCATATTGTCATTTTCATTAACTCAAACTTTTGTGGTGGCTGAGTTGCACCTTATTGTAAAATTCACTTTCCTCTATTTTCACTGCCTCTCTTTTTAATTGTTTATGTATTTTTTGTGTTCATAGAGCAAAAAGAGAAGCTTACCGATGTCGAACAGCAACTTAAGAAGGCCGAAGCTGCGCAGAGACGAAGAATGCAAGTTGAGAAGGCTGCTAGGGAATCTGAGGTTTGTTTTCTCTTCACCATAATATTTGCAATATGAATCATTTATATCTTGTACATTATTACTGATTAGATTAAGCTCCTTTCAAATGAATCTTGTAGGCTGAGGCGATCAGAAAGATACTCGGTCAAGATTCAAGCCGGAAGAAGCGTGAAGATAAAATGAAGAAGCGCCAGGAAGAACTAGCTCAGGTACCATAAAGGGTCAATCATGTAACTTTTAATTTTATGTTACATGTAGTGTATAATAAGATAATCAGTTTGATTCTGTTTTCTTAATGCTTATAGGAGAAGGCTGCAAATGCTCAGAAGCTCTTATCAAACACCATCAGATGGGTTATGGGTCCTTCCGGTACCGTGGTGACCTTTTCAAACGATATGGGCCTTCCAAGCCTTTTCGACTCCCAACCCTGCAGGTATTATCTTCTTCCTGCCATTTCGACTCATTCCAACACTATAAAACACCACATAATTTGTTTCTCAGTTGTCTGAAACCCCTTCTTCAATGTGTGTGCTCCAGTTATCCACCTCGGCGTGAAAACTGCGCAGGTCCCTCGTGTTCTAATCCATACAAGTATCGAGATTCAAAATCGAAGCTCCCTCTTTGCAGTCTCGTGTGTTACAAAGCGATTCAGGAGCAGTTAACAGAAGCTACCTGC

mRNA sequence

ATGGAAGAGTTTGGCCCTTCGGGGGTTTATGGAACCTCAACTATGAGGAGGAAAAGGAGTCGAACTTCCCGTCGACCTCGACTTGAGTCACAGCAATTTGCCGAAGGTCTTGATCCTTCACCTTCATCATCAACACCGCCTTCTGATGATGCAGTCAAGTTCTCCAGTGATGAGAATGGTGGTGGTGATGGTAATTCTAGAAGAAAAGAATTAAGCCTCAATCAATGTGTATCTAGAGGCTCGTCTGCTAGTGGGGCTGAAAGTGAACAATTTCTTAAAAGAAGCAAAAAGGATGGAAGTTTTAATTCATATTACCGTAGTGAACCCGGACGGAGTGCTAATGATAACAAACGCAGCAGCGAAGGTGTCCTTGCTCCTGCTAATTGGAGAAGCACCAGCAAGGTGTCAGATGGCATCGAATCGGAGTCGAGCAGCATTGATCCATACGGTGGAAGGTATGGTGGCGAAAGTTCAAGTTCTGGACAGAAAGGACTTTTCGTTGAAGGATTGGGAAATGATAACAAGGTTAAGAAGGTTAAGCTTAAGGTTGGTGGGGTCACTCGCACTATTCAAGCCCCGTCCCCTCCCAATGGTGCATCGAAAGGCAGTGGTTCAACGAAGAACTCTCATCCTTCAGATGTTCATAGGCAGCAACACAAGCAGAACTTTCAGGAAAACTATAATGGAAATCATTCCCCTTCAGACAAAAGGAGTGGATTGCATGGAATTCCATGGAGAGACTTCTCAAAAGGCGGTTTTGGTGTCGAGAAGGAGGAGCCTTTGACAGGGAAGGTGTCTGGTAGGAATTCTTCTGGGAAGCTTGGAGAGTCACTTCGGAAGAGCAAAAGAGCCTCAAAGAAACGTGTTCTTGATGGGGAATTTGATGACGATGATGAAGATGAGGAAATACGGTATTTGGAGAAGCTCAAAACGTCGAGGGCTTCTGTAGGGTACCGTGAAGATGGTGAAGGACCAACCAAGAAGCAGCGGAAACTTTCTAGCATTTCTAGCATGGAGAATTATGGTGCATCAAAGCATGACAAAGATTATGAGGAAGAAGAAGATTCAGCATCTGAGGGTGATGTCGAAGTTAATCATAAAAAGCAAAGGAAGGAATCTATTGACGTGTTGATGGATGGTAAGCGAGAAATGACTCTCACCACACGTCAAAGAGCTCTTCAGTCTAGCAAAGATGCATCGTCTGCTCGAGGTGCTAGTTTAATTGAATTTCCAAACGGTTTACCGCCTGCTCCACCCAGAAAGCAAAAAGAGAAGCTTACCGATGTCGAACAGCAACTTAAGAAGGCCGAAGCTGCGCAGAGACGAAGAATGCAAGTTGAGAAGGCTGCTAGGGAATCTGAGGCTGAGGCGATCAGAAAGATACTCGGTCAAGATTCAAGCCGGAAGAAGCGTGAAGATAAAATGAAGAAGCGCCAGGAAGAACTAGCTCAGGAGAAGGCTGCAAATGCTCAGAAGCTCTTATCAAACACCATCAGATGGGTTATGGGTCCTTCCGGTACCGTGGTGACCTTTTCAAACGATATGGGCCTTCCAAGCCTTTTCGACTCCCAACCCTGCAGTTATCCACCTCGGCGTGAAAACTGCGCAGGTCCCTCGTGTTCTAATCCATACAAGTATCGAGATTCAAAATCGAAGCTCCCTCTTTGCAGTCTCGTGTGTTACAAAGCGATTCAGGAGCAGTTAACAGAAGCTACCTGC

Coding sequence (CDS)

ATGGAAGAGTTTGGCCCTTCGGGGGTTTATGGAACCTCAACTATGAGGAGGAAAAGGAGTCGAACTTCCCGTCGACCTCGACTTGAGTCACAGCAATTTGCCGAAGGTCTTGATCCTTCACCTTCATCATCAACACCGCCTTCTGATGATGCAGTCAAGTTCTCCAGTGATGAGAATGGTGGTGGTGATGGTAATTCTAGAAGAAAAGAATTAAGCCTCAATCAATGTGTATCTAGAGGCTCGTCTGCTAGTGGGGCTGAAAGTGAACAATTTCTTAAAAGAAGCAAAAAGGATGGAAGTTTTAATTCATATTACCGTAGTGAACCCGGACGGAGTGCTAATGATAACAAACGCAGCAGCGAAGGTGTCCTTGCTCCTGCTAATTGGAGAAGCACCAGCAAGGTGTCAGATGGCATCGAATCGGAGTCGAGCAGCATTGATCCATACGGTGGAAGGTATGGTGGCGAAAGTTCAAGTTCTGGACAGAAAGGACTTTTCGTTGAAGGATTGGGAAATGATAACAAGGTTAAGAAGGTTAAGCTTAAGGTTGGTGGGGTCACTCGCACTATTCAAGCCCCGTCCCCTCCCAATGGTGCATCGAAAGGCAGTGGTTCAACGAAGAACTCTCATCCTTCAGATGTTCATAGGCAGCAACACAAGCAGAACTTTCAGGAAAACTATAATGGAAATCATTCCCCTTCAGACAAAAGGAGTGGATTGCATGGAATTCCATGGAGAGACTTCTCAAAAGGCGGTTTTGGTGTCGAGAAGGAGGAGCCTTTGACAGGGAAGGTGTCTGGTAGGAATTCTTCTGGGAAGCTTGGAGAGTCACTTCGGAAGAGCAAAAGAGCCTCAAAGAAACGTGTTCTTGATGGGGAATTTGATGACGATGATGAAGATGAGGAAATACGGTATTTGGAGAAGCTCAAAACGTCGAGGGCTTCTGTAGGGTACCGTGAAGATGGTGAAGGACCAACCAAGAAGCAGCGGAAACTTTCTAGCATTTCTAGCATGGAGAATTATGGTGCATCAAAGCATGACAAAGATTATGAGGAAGAAGAAGATTCAGCATCTGAGGGTGATGTCGAAGTTAATCATAAAAAGCAAAGGAAGGAATCTATTGACGTGTTGATGGATGGTAAGCGAGAAATGACTCTCACCACACGTCAAAGAGCTCTTCAGTCTAGCAAAGATGCATCGTCTGCTCGAGGTGCTAGTTTAATTGAATTTCCAAACGGTTTACCGCCTGCTCCACCCAGAAAGCAAAAAGAGAAGCTTACCGATGTCGAACAGCAACTTAAGAAGGCCGAAGCTGCGCAGAGACGAAGAATGCAAGTTGAGAAGGCTGCTAGGGAATCTGAGGCTGAGGCGATCAGAAAGATACTCGGTCAAGATTCAAGCCGGAAGAAGCGTGAAGATAAAATGAAGAAGCGCCAGGAAGAACTAGCTCAGGAGAAGGCTGCAAATGCTCAGAAGCTCTTATCAAACACCATCAGATGGGTTATGGGTCCTTCCGGTACCGTGGTGACCTTTTCAAACGATATGGGCCTTCCAAGCCTTTTCGACTCCCAACCCTGCAGTTATCCACCTCGGCGTGAAAACTGCGCAGGTCCCTCGTGTTCTAATCCATACAAGTATCGAGATTCAAAATCGAAGCTCCCTCTTTGCAGTCTCGTGTGTTACAAAGCGATTCAGGAGCAGTTAACAGAAGCTACCTGC

Protein sequence

MEEFGPSGVYGTSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDENGGGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRSSEGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKVKLKVGGVTRTIQAPSPPNGASKGSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGLHGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKLGESLRKSKRASKKRVLDGEFDDDDEDEEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKHDKDYEEEEDSASEGDVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGASLIEFPNGLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREDKMKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQPCSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAIQEQLTEATC

Homology

[Close]

BLAST of MS012102.1 vs. NCBI nr
Match: XP_022150978.1 (INO80 complex subunit B [Momordica charantia])

HSP 1 Score: 1073.5 bits (2775), Expect = 4.4e-310
Identity = 571/573 (99.65%), Postives = 572/573 (99.83%), Query Frame = 0


Query: 1   MEEFGPSGVYGTSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDENG 60
           MEEFGPSGVYGTSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDENG
Sbjct: 1   MEEFGPSGVYGTSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDENG 60

Query: 61  GGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRSS 120
           GGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRSS
Sbjct: 61  GGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRSS 120

Query: 121 EGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKVK 180
           EGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKVK
Sbjct: 121 EGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKVK 180

Query: 181 LKVGGVTRTIQAPSPPNGASKGSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGL 240
           LKVGGVTRTIQAPSPPNGASKGSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGL
Sbjct: 181 LKVGGVTRTIQAPSPPNGASKGSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGL 240

Query: 241 HGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKLGESLRKSKRASKKRVLDGEFDDDDED 300
           HGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGK GESLRKSKRASKKRVLDGEFDDDDED
Sbjct: 241 HGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKHGESLRKSKRASKKRVLDGEFDDDDED 300

Query: 301 EEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKHDKDYEEEEDSASEG 360
           EEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKHDKDYEEEEDSASEG
Sbjct: 301 EEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKHDKDYEEEEDSASEG 360

Query: 361 DVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGASLIEFPNGLPPAPPR 420
           DVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGASLIEFPNGLPPAPPR
Sbjct: 361 DVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGASLIEFPNGLPPAPPR 420

Query: 421 KQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREDKMKKRQE 480
           KQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEA+AIRKILGQDSSRKKREDKMKKRQE
Sbjct: 421 KQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEADAIRKILGQDSSRKKREDKMKKRQE 480

Query: 481 ELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQPCSYPPRRENCAGPSC 540
           ELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQPCSYPPRRENCAGPSC
Sbjct: 481 ELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQPCSYPPRRENCAGPSC 540

Query: 541 SNPYKYRDSKSKLPLCSLVCYKAIQEQLTEATC 574
           SNPYKYRDSKSKLPLCSLVCYKAIQEQLTEATC
Sbjct: 541 SNPYKYRDSKSKLPLCSLVCYKAIQEQLTEATC 573

[Close]

BLAST of MS012102.1 vs. NCBI nr
Match: XP_023004495.1 (uncharacterized protein LOC111497783 [Cucurbita maxima])

HSP 1 Score: 958.4 bits (2476), Expect = 2.8e-275
Identity = 518/588 (88.10%), Postives = 544/588 (92.52%), Query Frame = 0


Query: 1   MEEFGPSGVYGTSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDENG 60
           MEEFG SG+YG STMRRKRSRTSRRPRLESQQF EGLDPSPSSSTPPSDDAVK SSDENG
Sbjct: 1   MEEFGTSGIYGNSTMRRKRSRTSRRPRLESQQFTEGLDPSPSSSTPPSDDAVKLSSDENG 60

Query: 61  GGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRSS 120
           GGDG SRRKELSLNQCVSRGSSASGAE+E FLKRSKKDGS+NSYYRSEPGR+ANDNKRSS
Sbjct: 61  GGDGASRRKELSLNQCVSRGSSASGAENEHFLKRSKKDGSYNSYYRSEPGRNANDNKRSS 120

Query: 121 EGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKVK 180
           EGVLAPANWRSTSK SDGIESESSSIDPYGGRYGGESSSSGQKGL+VEG+GNDNKVKKVK
Sbjct: 121 EGVLAPANWRSTSKGSDGIESESSSIDPYGGRYGGESSSSGQKGLYVEGVGNDNKVKKVK 180

Query: 181 LKVGGVTRTIQAPSPPNGASKGSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGL 240
           LKVGGVTRTIQA SPPNG+SKGS S+K S PSD+HRQQHK N  E +NGNHSPS++R GL
Sbjct: 181 LKVGGVTRTIQATSPPNGSSKGS-SSKCSQPSDIHRQQHKNNVLETFNGNHSPSERRGGL 240

Query: 241 HGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKLG-ESLRKSKRASKKRVLDGEFDDDDE 300
           HG+PWRDFS+GGFG+EKEE LTGK SGRNSSGK G ESLRKSKRASKKRVLDG+FDDDD 
Sbjct: 241 HGVPWRDFSRGGFGLEKEESLTGKTSGRNSSGKHGAESLRKSKRASKKRVLDGDFDDDD- 300

Query: 301 DEEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKH------------- 360
           D+EIRYLEKLKTSRASVGY +DGEGP+KKQRKLSSISSMENYGA KH             
Sbjct: 301 DDEIRYLEKLKTSRASVGYHDDGEGPSKKQRKLSSISSMENYGALKHDKDGKKARTELGS 360

Query: 361 -DKDYEEEEDSASEGDVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGA 420
            DKDYEEEE+SAS+G V+ NHKKQRKESID LMDGKREMTLTTRQRALQSSKDASSARGA
Sbjct: 361 DDKDYEEEEESASDGVVDANHKKQRKESIDTLMDGKREMTLTTRQRALQSSKDASSARGA 420

Query: 421 SLIEFPNGLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQD 480
           +LIEFPNGLPPAPPRKQKEKLTDVEQQLKK EAAQRRRMQVEKAARESEAEAIRKILGQD
Sbjct: 421 TLIEFPNGLPPAPPRKQKEKLTDVEQQLKKVEAAQRRRMQVEKAARESEAEAIRKILGQD 480

Query: 481 SSRKKREDKMKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQP 540
           SSRKKREDK KKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTF NDMGLPS+FDSQP
Sbjct: 481 SSRKKREDKKKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFPNDMGLPSIFDSQP 540

Query: 541 CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAIQEQLTEATC 574
           CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKA+QEQLTE+ C
Sbjct: 541 CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAVQEQLTESRC 586

[Close]

BLAST of MS012102.1 vs. NCBI nr
Match: XP_022959650.1 (uncharacterized protein LOC111460665 [Cucurbita moschata] >KAG6593245.1 hypothetical protein SDJN03_12721, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 956.1 bits (2470), Expect = 1.4e-274
Identity = 516/588 (87.76%), Postives = 544/588 (92.52%), Query Frame = 0


Query: 1   MEEFGPSGVYGTSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDENG 60
           MEEFG SG+YG STMRRKRSRTSRRPRLESQQF EGLDPSPSSSTPPSDDAVK SSDENG
Sbjct: 1   MEEFGTSGIYGNSTMRRKRSRTSRRPRLESQQFTEGLDPSPSSSTPPSDDAVKLSSDENG 60

Query: 61  GGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRSS 120
           GGDG SRRKELSLNQCVSRGSSASGAE+E FLKRSKKDGS+NSYYRSEPGR+A+DNKRSS
Sbjct: 61  GGDGASRRKELSLNQCVSRGSSASGAENEHFLKRSKKDGSYNSYYRSEPGRNASDNKRSS 120

Query: 121 EGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKVK 180
           EGVLAPANWRSTSK SDGIESESSSIDPYGGRYGGESSSSGQKGL+VEG+GNDNKVKKVK
Sbjct: 121 EGVLAPANWRSTSKGSDGIESESSSIDPYGGRYGGESSSSGQKGLYVEGVGNDNKVKKVK 180

Query: 181 LKVGGVTRTIQAPSPPNGASKGSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGL 240
           LKVGGVTRTIQA SPPNG+SKGS S+K+S PSD+HRQQHK N  E +NGNHSPS++R GL
Sbjct: 181 LKVGGVTRTIQATSPPNGSSKGS-SSKSSQPSDIHRQQHKNNVLETFNGNHSPSERRGGL 240

Query: 241 HGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKLG-ESLRKSKRASKKRVLDGEFDDDDE 300
           HG+PWRDFS+GGFG+EKEE LTGK SGRNSSGK G ESLRKSKRASKKRVLDG+FDDDD 
Sbjct: 241 HGVPWRDFSRGGFGLEKEESLTGKTSGRNSSGKHGAESLRKSKRASKKRVLDGDFDDDD- 300

Query: 301 DEEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKH------------- 360
           D+EIRYLEKLKTSRASVGY +DGEGP+KKQRKLSSISSMENYGA KH             
Sbjct: 301 DDEIRYLEKLKTSRASVGYHDDGEGPSKKQRKLSSISSMENYGALKHDKDGKKARTEMGS 360

Query: 361 -DKDYEEEEDSASEGDVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGA 420
            DKDYEEEE+SAS+G VE NHKKQRKESID LMDGKREMTLTTRQRALQSSKDASS RGA
Sbjct: 361 DDKDYEEEEESASDGVVEANHKKQRKESIDTLMDGKREMTLTTRQRALQSSKDASSTRGA 420

Query: 421 SLIEFPNGLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQD 480
           +LIEFPNGLPPAPPRKQKEKLTDVEQQLKK EAAQRRRMQVEKAARESEAEAIRKILGQD
Sbjct: 421 TLIEFPNGLPPAPPRKQKEKLTDVEQQLKKVEAAQRRRMQVEKAARESEAEAIRKILGQD 480

Query: 481 SSRKKREDKMKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQP 540
           SSRKKREDK KKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTF NDMGLPS+FDS+P
Sbjct: 481 SSRKKREDKKKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFPNDMGLPSIFDSRP 540

Query: 541 CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAIQEQLTEATC 574
           CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKA+QEQLTE+ C
Sbjct: 541 CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAVQEQLTESRC 586

[Close]

BLAST of MS012102.1 vs. NCBI nr
Match: KAG7025595.1 (hypothetical protein SDJN02_12092, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 954.5 bits (2466), Expect = 4.1e-274
Identity = 515/588 (87.59%), Postives = 544/588 (92.52%), Query Frame = 0


Query: 1   MEEFGPSGVYGTSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDENG 60
           MEEFG SG+YG STMRRKRSRTSRRPRLESQQF EGLDPSPSSSTPPSDDAVK SSDENG
Sbjct: 1   MEEFGTSGIYGNSTMRRKRSRTSRRPRLESQQFTEGLDPSPSSSTPPSDDAVKLSSDENG 60

Query: 61  GGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRSS 120
           GGDG SRRKELSLNQCVSRGSSASGA++E FLKRSKKDGS+NSYYRSEPGR+A+DNKRSS
Sbjct: 61  GGDGASRRKELSLNQCVSRGSSASGAKNEHFLKRSKKDGSYNSYYRSEPGRNASDNKRSS 120

Query: 121 EGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKVK 180
           EGVLAPANWRSTSK SDGIESESSSIDPYGGRYGGESSSSGQKGL+VEG+GNDNKVKKVK
Sbjct: 121 EGVLAPANWRSTSKGSDGIESESSSIDPYGGRYGGESSSSGQKGLYVEGVGNDNKVKKVK 180

Query: 181 LKVGGVTRTIQAPSPPNGASKGSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGL 240
           LKVGGVTRTIQA SPPNG+SKGS S+K+S PSD+HRQQHK N  E +NGNHSPS++R GL
Sbjct: 181 LKVGGVTRTIQATSPPNGSSKGS-SSKSSQPSDIHRQQHKNNVLETFNGNHSPSERRGGL 240

Query: 241 HGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKLG-ESLRKSKRASKKRVLDGEFDDDDE 300
           HG+PWRDFS+GGFG+EKEE LTGK SGRNSSGK G ESLRKSKRASKKRVLDG+FDDDD 
Sbjct: 241 HGVPWRDFSRGGFGLEKEESLTGKTSGRNSSGKHGAESLRKSKRASKKRVLDGDFDDDD- 300

Query: 301 DEEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKH------------- 360
           D+EIRYLEKLKTSRASVGY +DGEGP+KKQRKLSSISSMENYGA KH             
Sbjct: 301 DDEIRYLEKLKTSRASVGYHDDGEGPSKKQRKLSSISSMENYGALKHDKDGKKARTEMGS 360

Query: 361 -DKDYEEEEDSASEGDVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGA 420
            DKDYEEEE+SAS+G VE NHKKQRKESID LMDGKREMTLTTRQRALQSSKDASS RGA
Sbjct: 361 DDKDYEEEEESASDGVVEANHKKQRKESIDTLMDGKREMTLTTRQRALQSSKDASSTRGA 420

Query: 421 SLIEFPNGLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQD 480
           +LIEFPNGLPPAPPRKQKEKLTDVEQQLKK EAAQRRRMQVEKAARESEAEAIRKILGQD
Sbjct: 421 TLIEFPNGLPPAPPRKQKEKLTDVEQQLKKVEAAQRRRMQVEKAARESEAEAIRKILGQD 480

Query: 481 SSRKKREDKMKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQP 540
           SSRKKREDK KKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTF NDMGLPS+FDS+P
Sbjct: 481 SSRKKREDKKKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFPNDMGLPSIFDSRP 540

Query: 541 CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAIQEQLTEATC 574
           CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKA+QEQLTE+ C
Sbjct: 541 CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAVQEQLTESRC 586

[Close]

BLAST of MS012102.1 vs. NCBI nr
Match: XP_023514963.1 (uncharacterized protein LOC111779121 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 953.7 bits (2464), Expect = 7.0e-274
Identity = 514/588 (87.41%), Postives = 543/588 (92.35%), Query Frame = 0


Query: 1   MEEFGPSGVYGTSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDENG 60
           MEEFG SG+YG STMRRKRSRTSRRPRLESQQF EGLDPSPSSSTPPSDDAVK SSDENG
Sbjct: 1   MEEFGTSGIYGNSTMRRKRSRTSRRPRLESQQFTEGLDPSPSSSTPPSDDAVKLSSDENG 60

Query: 61  GGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRSS 120
           GGDG SRRKELSLNQCVSRGSSASGAE+E FLKRSKKDGS+NSYYRSEPGR+A+DNKRSS
Sbjct: 61  GGDGGSRRKELSLNQCVSRGSSASGAENEHFLKRSKKDGSYNSYYRSEPGRNASDNKRSS 120

Query: 121 EGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKVK 180
           EGVLAPANWRSTSK SDGIESESSSIDPYGGRYGGESSSSGQKGL+VEG+GNDNKVKKVK
Sbjct: 121 EGVLAPANWRSTSKGSDGIESESSSIDPYGGRYGGESSSSGQKGLYVEGVGNDNKVKKVK 180

Query: 181 LKVGGVTRTIQAPSPPNGASKGSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGL 240
           LKVGGVTRTIQA SPPNG+SKGS S+K+S PSD+HRQQHK N  E +NGNHSPS+++ GL
Sbjct: 181 LKVGGVTRTIQATSPPNGSSKGS-SSKSSQPSDIHRQQHKNNVLETFNGNHSPSERKGGL 240

Query: 241 HGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKLG-ESLRKSKRASKKRVLDGEFDDDDE 300
           HG+PWRDFS+GGFG+EKEE LTGK SGRNSSGK G ESLRKSKRASKKRVLDG+FDDDD 
Sbjct: 241 HGVPWRDFSRGGFGLEKEESLTGKTSGRNSSGKHGAESLRKSKRASKKRVLDGDFDDDD- 300

Query: 301 DEEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKH------------- 360
           D+EIRYLEKLKTSRASVGY +DGEGP+KKQRKLSSISSMENYGA KH             
Sbjct: 301 DDEIRYLEKLKTSRASVGYHDDGEGPSKKQRKLSSISSMENYGALKHDKDGKKARTEMGS 360

Query: 361 -DKDYEEEEDSASEGDVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGA 420
            DKDYEEEE+SAS+G VE NHKKQRKESID LMDGKREMTLTTRQRALQSSKDASS RGA
Sbjct: 361 DDKDYEEEEESASDGVVEANHKKQRKESIDTLMDGKREMTLTTRQRALQSSKDASSTRGA 420

Query: 421 SLIEFPNGLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQD 480
           +LIEFPNGLPPAPPRKQKEKLTDVEQQLKK EAAQRRRMQVEKAARESEAEAIRKILGQD
Sbjct: 421 TLIEFPNGLPPAPPRKQKEKLTDVEQQLKKVEAAQRRRMQVEKAARESEAEAIRKILGQD 480

Query: 481 SSRKKREDKMKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQP 540
           SSRKKREDK KKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTF NDMGLPS+FDS+P
Sbjct: 481 SSRKKREDKKKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFPNDMGLPSIFDSRP 540

Query: 541 CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAIQEQLTEATC 574
           CSYPPRRENCAGPSCSNPYKYRDSKS LPLCSLVCYKA+QEQLTE+ C
Sbjct: 541 CSYPPRRENCAGPSCSNPYKYRDSKSNLPLCSLVCYKAVQEQLTESRC 586

[Close]

BLAST of MS012102.1 vs. ExPASy TrEMBL
Match: A0A6J1DAX2 (INO80 complex subunit B OS=Momordica charantia OX=3673 GN=LOC111018998 PE=4 SV=1)

HSP 1 Score: 1073.5 bits (2775), Expect = 2.1e-310
Identity = 571/573 (99.65%), Postives = 572/573 (99.83%), Query Frame = 0


Query: 1   MEEFGPSGVYGTSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDENG 60
           MEEFGPSGVYGTSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDENG
Sbjct: 1   MEEFGPSGVYGTSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDENG 60

Query: 61  GGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRSS 120
           GGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRSS
Sbjct: 61  GGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRSS 120

Query: 121 EGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKVK 180
           EGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKVK
Sbjct: 121 EGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKVK 180

Query: 181 LKVGGVTRTIQAPSPPNGASKGSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGL 240
           LKVGGVTRTIQAPSPPNGASKGSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGL
Sbjct: 181 LKVGGVTRTIQAPSPPNGASKGSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGL 240

Query: 241 HGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKLGESLRKSKRASKKRVLDGEFDDDDED 300
           HGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGK GESLRKSKRASKKRVLDGEFDDDDED
Sbjct: 241 HGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKHGESLRKSKRASKKRVLDGEFDDDDED 300

Query: 301 EEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKHDKDYEEEEDSASEG 360
           EEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKHDKDYEEEEDSASEG
Sbjct: 301 EEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKHDKDYEEEEDSASEG 360

Query: 361 DVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGASLIEFPNGLPPAPPR 420
           DVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGASLIEFPNGLPPAPPR
Sbjct: 361 DVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGASLIEFPNGLPPAPPR 420

Query: 421 KQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREDKMKKRQE 480
           KQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEA+AIRKILGQDSSRKKREDKMKKRQE
Sbjct: 421 KQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEADAIRKILGQDSSRKKREDKMKKRQE 480

Query: 481 ELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQPCSYPPRRENCAGPSC 540
           ELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQPCSYPPRRENCAGPSC
Sbjct: 481 ELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQPCSYPPRRENCAGPSC 540

Query: 541 SNPYKYRDSKSKLPLCSLVCYKAIQEQLTEATC 574
           SNPYKYRDSKSKLPLCSLVCYKAIQEQLTEATC
Sbjct: 541 SNPYKYRDSKSKLPLCSLVCYKAIQEQLTEATC 573

[Close]

BLAST of MS012102.1 vs. ExPASy TrEMBL
Match: A0A6J1KUR2 (uncharacterized protein LOC111497783 OS=Cucurbita maxima OX=3661 GN=LOC111497783 PE=4 SV=1)

HSP 1 Score: 958.4 bits (2476), Expect = 1.4e-275
Identity = 518/588 (88.10%), Postives = 544/588 (92.52%), Query Frame = 0


Query: 1   MEEFGPSGVYGTSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDENG 60
           MEEFG SG+YG STMRRKRSRTSRRPRLESQQF EGLDPSPSSSTPPSDDAVK SSDENG
Sbjct: 1   MEEFGTSGIYGNSTMRRKRSRTSRRPRLESQQFTEGLDPSPSSSTPPSDDAVKLSSDENG 60

Query: 61  GGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRSS 120
           GGDG SRRKELSLNQCVSRGSSASGAE+E FLKRSKKDGS+NSYYRSEPGR+ANDNKRSS
Sbjct: 61  GGDGASRRKELSLNQCVSRGSSASGAENEHFLKRSKKDGSYNSYYRSEPGRNANDNKRSS 120

Query: 121 EGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKVK 180
           EGVLAPANWRSTSK SDGIESESSSIDPYGGRYGGESSSSGQKGL+VEG+GNDNKVKKVK
Sbjct: 121 EGVLAPANWRSTSKGSDGIESESSSIDPYGGRYGGESSSSGQKGLYVEGVGNDNKVKKVK 180

Query: 181 LKVGGVTRTIQAPSPPNGASKGSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGL 240
           LKVGGVTRTIQA SPPNG+SKGS S+K S PSD+HRQQHK N  E +NGNHSPS++R GL
Sbjct: 181 LKVGGVTRTIQATSPPNGSSKGS-SSKCSQPSDIHRQQHKNNVLETFNGNHSPSERRGGL 240

Query: 241 HGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKLG-ESLRKSKRASKKRVLDGEFDDDDE 300
           HG+PWRDFS+GGFG+EKEE LTGK SGRNSSGK G ESLRKSKRASKKRVLDG+FDDDD 
Sbjct: 241 HGVPWRDFSRGGFGLEKEESLTGKTSGRNSSGKHGAESLRKSKRASKKRVLDGDFDDDD- 300

Query: 301 DEEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKH------------- 360
           D+EIRYLEKLKTSRASVGY +DGEGP+KKQRKLSSISSMENYGA KH             
Sbjct: 301 DDEIRYLEKLKTSRASVGYHDDGEGPSKKQRKLSSISSMENYGALKHDKDGKKARTELGS 360

Query: 361 -DKDYEEEEDSASEGDVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGA 420
            DKDYEEEE+SAS+G V+ NHKKQRKESID LMDGKREMTLTTRQRALQSSKDASSARGA
Sbjct: 361 DDKDYEEEEESASDGVVDANHKKQRKESIDTLMDGKREMTLTTRQRALQSSKDASSARGA 420

Query: 421 SLIEFPNGLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQD 480
           +LIEFPNGLPPAPPRKQKEKLTDVEQQLKK EAAQRRRMQVEKAARESEAEAIRKILGQD
Sbjct: 421 TLIEFPNGLPPAPPRKQKEKLTDVEQQLKKVEAAQRRRMQVEKAARESEAEAIRKILGQD 480

Query: 481 SSRKKREDKMKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQP 540
           SSRKKREDK KKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTF NDMGLPS+FDSQP
Sbjct: 481 SSRKKREDKKKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFPNDMGLPSIFDSQP 540

Query: 541 CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAIQEQLTEATC 574
           CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKA+QEQLTE+ C
Sbjct: 541 CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAVQEQLTESRC 586

[Close]

BLAST of MS012102.1 vs. ExPASy TrEMBL
Match: A0A6J1H6W4 (uncharacterized protein LOC111460665 OS=Cucurbita moschata OX=3662 GN=LOC111460665 PE=4 SV=1)

HSP 1 Score: 956.1 bits (2470), Expect = 6.8e-275
Identity = 516/588 (87.76%), Postives = 544/588 (92.52%), Query Frame = 0


Query: 1   MEEFGPSGVYGTSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDENG 60
           MEEFG SG+YG STMRRKRSRTSRRPRLESQQF EGLDPSPSSSTPPSDDAVK SSDENG
Sbjct: 1   MEEFGTSGIYGNSTMRRKRSRTSRRPRLESQQFTEGLDPSPSSSTPPSDDAVKLSSDENG 60

Query: 61  GGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRSS 120
           GGDG SRRKELSLNQCVSRGSSASGAE+E FLKRSKKDGS+NSYYRSEPGR+A+DNKRSS
Sbjct: 61  GGDGASRRKELSLNQCVSRGSSASGAENEHFLKRSKKDGSYNSYYRSEPGRNASDNKRSS 120

Query: 121 EGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKVK 180
           EGVLAPANWRSTSK SDGIESESSSIDPYGGRYGGESSSSGQKGL+VEG+GNDNKVKKVK
Sbjct: 121 EGVLAPANWRSTSKGSDGIESESSSIDPYGGRYGGESSSSGQKGLYVEGVGNDNKVKKVK 180

Query: 181 LKVGGVTRTIQAPSPPNGASKGSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGL 240
           LKVGGVTRTIQA SPPNG+SKGS S+K+S PSD+HRQQHK N  E +NGNHSPS++R GL
Sbjct: 181 LKVGGVTRTIQATSPPNGSSKGS-SSKSSQPSDIHRQQHKNNVLETFNGNHSPSERRGGL 240

Query: 241 HGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKLG-ESLRKSKRASKKRVLDGEFDDDDE 300
           HG+PWRDFS+GGFG+EKEE LTGK SGRNSSGK G ESLRKSKRASKKRVLDG+FDDDD 
Sbjct: 241 HGVPWRDFSRGGFGLEKEESLTGKTSGRNSSGKHGAESLRKSKRASKKRVLDGDFDDDD- 300

Query: 301 DEEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKH------------- 360
           D+EIRYLEKLKTSRASVGY +DGEGP+KKQRKLSSISSMENYGA KH             
Sbjct: 301 DDEIRYLEKLKTSRASVGYHDDGEGPSKKQRKLSSISSMENYGALKHDKDGKKARTEMGS 360

Query: 361 -DKDYEEEEDSASEGDVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGA 420
            DKDYEEEE+SAS+G VE NHKKQRKESID LMDGKREMTLTTRQRALQSSKDASS RGA
Sbjct: 361 DDKDYEEEEESASDGVVEANHKKQRKESIDTLMDGKREMTLTTRQRALQSSKDASSTRGA 420

Query: 421 SLIEFPNGLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQD 480
           +LIEFPNGLPPAPPRKQKEKLTDVEQQLKK EAAQRRRMQVEKAARESEAEAIRKILGQD
Sbjct: 421 TLIEFPNGLPPAPPRKQKEKLTDVEQQLKKVEAAQRRRMQVEKAARESEAEAIRKILGQD 480

Query: 481 SSRKKREDKMKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQP 540
           SSRKKREDK KKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTF NDMGLPS+FDS+P
Sbjct: 481 SSRKKREDKKKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFPNDMGLPSIFDSRP 540

Query: 541 CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAIQEQLTEATC 574
           CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKA+QEQLTE+ C
Sbjct: 541 CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAVQEQLTESRC 586

[Close]

BLAST of MS012102.1 vs. ExPASy TrEMBL
Match: A0A6J1GPW0 (INO80 complex subunit B-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456380 PE=4 SV=1)

HSP 1 Score: 932.9 bits (2410), Expect = 6.2e-268
Identity = 503/587 (85.69%), Postives = 538/587 (91.65%), Query Frame = 0


Query: 1   MEEFGPSGVYGTSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDENG 60
           MEEF  SG+YG+STMRRKRSRTSRRPRLESQQ AEGLDPSPSSSTPPSDDAVKFSSDENG
Sbjct: 1   MEEFRTSGIYGSSTMRRKRSRTSRRPRLESQQLAEGLDPSPSSSTPPSDDAVKFSSDENG 60

Query: 61  GGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRSS 120
           GGDG+SRRKELSLNQCVSRGSS +GAE+E FLKRS KDGS+NSYYRSEPG+SANDNKRSS
Sbjct: 61  GGDGSSRRKELSLNQCVSRGSSVNGAENEHFLKRSIKDGSYNSYYRSEPGQSANDNKRSS 120

Query: 121 EGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKVK 180
           EGVLAPANWRSTSK SDGIESESSSIDPYGGRYGGESSSSGQKGL+ EGLGND+KVKKVK
Sbjct: 121 EGVLAPANWRSTSKASDGIESESSSIDPYGGRYGGESSSSGQKGLYAEGLGNDSKVKKVK 180

Query: 181 LKVGGVTRTIQAPSPPNGASKGSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGL 240
           L+VGGVTRTI+A SPPNG SKGS        SD HRQQHK NFQEN+ GNHSPS++R GL
Sbjct: 181 LRVGGVTRTIRATSPPNGTSKGSS-------SDGHRQQHKHNFQENFTGNHSPSERRGGL 240

Query: 241 HGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKLG-ESLRKSKRASKKRVLDGEFDDDDE 300
           HG+PWRDFS+GGFG+EKEEPLTGK++GRNS+GK G ES+RKSKRASKKRVL+G+F DDDE
Sbjct: 241 HGVPWRDFSRGGFGLEKEEPLTGKMAGRNSAGKHGAESVRKSKRASKKRVLNGDF-DDDE 300

Query: 301 DEEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKH------------- 360
           D+EIRYLEKLKTS+A  GYR+DG+ P KKQRKLSSISS+ENYGASKH             
Sbjct: 301 DDEIRYLEKLKTSKAYAGYRDDGDEPIKKQRKLSSISSVENYGASKHDKDGKKARSDMAS 360

Query: 361 -DKDYEEEEDSASEGDVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGA 420
            DKDYEEEE+SAS+GDVE NHKKQRKESID LMDGKREMTLTTRQRALQSSKDA+SARGA
Sbjct: 361 EDKDYEEEEESASDGDVEANHKKQRKESIDALMDGKREMTLTTRQRALQSSKDATSARGA 420

Query: 421 SLIEFPNGLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQD 480
           SLIEFPNGLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQD
Sbjct: 421 SLIEFPNGLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQD 480

Query: 481 SSRKKREDKMKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQP 540
           SSRKKREDKMKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTF NDMGLPS+F+S+P
Sbjct: 481 SSRKKREDKMKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFPNDMGLPSIFESRP 540

Query: 541 CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAIQEQLTEAT 573
           C YPPRRENCAGPSC NPYKYRDSKSKLP+CSLVCYKAIQEQLTE T
Sbjct: 541 CRYPPRRENCAGPSCLNPYKYRDSKSKLPVCSLVCYKAIQEQLTETT 579

[Close]

BLAST of MS012102.1 vs. ExPASy TrEMBL
Match: A0A0A0K5U0 (PAPA-1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G407730 PE=4 SV=1)

HSP 1 Score: 931.8 bits (2407), Expect = 1.4e-267
Identity = 503/583 (86.28%), Postives = 534/583 (91.60%), Query Frame = 0


Query: 1   MEEFGPSGVYGTSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDENG 60
           MEEFG SG+YG+STMRRKRSR SRRPRLESQQ  EG+DPSPSSSTPPSDDAVKFSSDENG
Sbjct: 1   MEEFGTSGIYGSSTMRRKRSRPSRRPRLESQQLGEGIDPSPSSSTPPSDDAVKFSSDENG 60

Query: 61  GGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRSS 120
           GGDG   RKELSLNQCVSRGSSASG ESE FLKRSKKDGSF SYYRSEPGRSANDNKRSS
Sbjct: 61  GGDGTPGRKELSLNQCVSRGSSASGPESEHFLKRSKKDGSFGSYYRSEPGRSANDNKRSS 120

Query: 121 EGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKVK 180
           EGVLAPANWRSTSKVSDG+ESESSSIDPYGGRYGGESSSSGQKGL+VE L NDNKVKKVK
Sbjct: 121 EGVLAPANWRSTSKVSDGMESESSSIDPYGGRYGGESSSSGQKGLYVEELANDNKVKKVK 180

Query: 181 LKVGGVTRTIQAPSPPNGASKGSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGL 240
           L+VGGVTRTIQA SPPNG SKG     NS PSD HRQQHK NFQEN+NGNHSPS++R GL
Sbjct: 181 LRVGGVTRTIQANSPPNGTSKG-----NSQPSDGHRQQHKHNFQENFNGNHSPSERRGGL 240

Query: 241 HGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKLG-ESLRKSKRASKKRVLDGEFDDDDE 300
           HG+PWRDFS+GGFG+EKEE LTGK+ GRNS+GK G E+LRKSKRASKKRVLDG+FDDDD 
Sbjct: 241 HGVPWRDFSRGGFGLEKEETLTGKMPGRNSAGKHGAETLRKSKRASKKRVLDGDFDDDD- 300

Query: 301 DEEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKH---------DKDY 360
           D+EIRYLEKL+TS+A  GYR+DGE P+KKQRKLSSISSMENYGASKH         DKDY
Sbjct: 301 DDEIRYLEKLRTSKAYAGYRDDGEEPSKKQRKLSSISSMENYGASKHKVRSDIASDDKDY 360

Query: 361 EEEEDSASEGDVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGASLIEF 420
           EE+E+SAS+ D + NHKKQRKESID LM+GKREMTLTTRQRALQSSK+ASSARG SLIEF
Sbjct: 361 EEDEESASDIDADGNHKKQRKESIDTLMEGKREMTLTTRQRALQSSKEASSARGGSLIEF 420

Query: 421 PNGLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKK 480
           PNGLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKK
Sbjct: 421 PNGLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKK 480

Query: 481 REDKMKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQPCSYPP 540
           REDK+KKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTF NDMG PS+F+S+PCSYPP
Sbjct: 481 REDKVKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFPNDMGFPSIFESRPCSYPP 540

Query: 541 RRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAIQEQLTEATC 574
            RENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAIQEQLTE TC
Sbjct: 541 LRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAIQEQLTETTC 577

[Close]

BLAST of MS012102.1 vs. TAIR 10
Match: AT2G47350.1 (HIT zinc finger ;PAPA-1-like conserved region )

HSP 1 Score: 317.0 bits (811), Expect = 3.1e-86
Identity = 253/569 (44.46%), Postives = 334/569 (58.70%), Query Frame = 0


Query: 1   MEEFGPSGVYG-TSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDEN 60
           ME+ G +   G T+T+R+KRS T RRPR           P  SS    SD   K SSD+ 
Sbjct: 1   MEDNGVAYCDGMTNTVRKKRSLTCRRPR-----------PEGSSVLTSSDRFSKISSDDI 60

Query: 61  GGGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRS 120
              D N RRKE SL+ C+SR  S   AESE+           N + R E     N NKRS
Sbjct: 61  PAFDTNPRRKEFSLSHCISRAESI--AESER---------GNNDFRRRE---IINRNKRS 120

Query: 121 SEGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKV 180
           +EGVLAPA+ +  S+  +G            G   G+ + SG+    +EG     + K++
Sbjct: 121 TEGVLAPASSKYPSREVEG-----------NGMINGKGTDSGE----LEG-----ETKRM 180

Query: 181 KLKVGGVTRTIQAPSPPNGASKGSGSTKNSHP-SDVHRQQHKQNFQENYNGNHSPSDKRS 240
           KLK+GGV+R + A    NG+S+     K+S P +D  R  H  + QE+    +SP DK++
Sbjct: 181 KLKIGGVSRLVHA----NGSSR-----KSSKPVTDTIRSNH--DLQESSEDCNSPLDKKA 240

Query: 241 GLHGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKLGESLRKSKRASKKRVLDGEFDDDD 300
            L G+ W            +  + G ++GR    +    +RKSKRA KKRV D    DDD
Sbjct: 241 DLEGVTW------------DAEIDGSMTGRRKQEEPSGLVRKSKRAPKKRVFD---SDDD 300

Query: 301 EDEEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKHDKDYEEEEDSAS 360
            D+EIRYLEKLK  R SV   +   G  +KQ   S I++ EN G  K   +   E+   +
Sbjct: 301 SDDEIRYLEKLKYKRVSVCNEDTESG--RKQLTPSGITNGENSGKKKAVSEQASEDMDCA 360

Query: 361 EGDVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGASLIEFPNGLPPAP 420
           E   E+      KE   +  D KRE T+T+RQRAL S +       +S I+F +GLPP  
Sbjct: 361 E---EIETASDEKE---IGNDNKRESTMTSRQRALASGR-------SSAIDFSDGLPPT- 420

Query: 421 PRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREDKMKKR 480
            R++KE L+++EQQLKKAEAAQRR++Q+EKAARESE  AI+KILGQDSSRKKR DK+KKR
Sbjct: 421 SRRKKETLSEMEQQLKKAEAAQRRKVQIEKAARESEEGAIKKILGQDSSRKKRGDKIKKR 480

Query: 481 QEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQPCSYPPRRENCAGP 540
            ++LAQEKAA  ++  +  IR +MGP+GT V+F  D  +PSLFD +P  YPP RENC GP
Sbjct: 481 LDDLAQEKAAQEERASTCCIRTIMGPNGTTVSFPIDK-VPSLFDPKPSGYPPPRENCVGP 481

Query: 541 SCSNPYKYRDSKSKLPLCSLVCYKAIQEQ 568
           SC+NPYKYRDSK+K+PLCSL CYKA+Q Q
Sbjct: 541 SCTNPYKYRDSKTKVPLCSLKCYKAVQGQ 481

[Close]

BLAST of MS012102.1 vs. TAIR 10
Match: AT1G56460.2 (HIT zinc finger ;PAPA-1-like conserved region )

HSP 1 Score: 287.0 bits (733), Expect = 3.4e-77
Identity = 206/453 (45.47%), Postives = 272/453 (60.04%), Query Frame = 0


Query: 152 RYGGESSSSGQKGLFVEGLGND-------------NKVKKVKLKVGGVTRTIQAPSPPNG 211
           R GG  S++  +G  V     D             N +KKVKLK+GG ++TI   S  +G
Sbjct: 106 RQGGGHSTASTEGFLVPSKKKDTIDTTERRAGFDENIIKKVKLKLGGSSKTINIISASDG 165

Query: 212 ASK-GSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGLHGIPWRDFSKGGFGVEK 271
           AS  G  STK+SH SD       Q +QE  N      ++ + L G P    SK       
Sbjct: 166 ASDIGLCSTKSSHASD-DALGIGQTYQEISN------ERSTKLRGTPLDTASK------- 225

Query: 272 EEPLTGKVSGRNSSGKLGESLRKSKRASKKRVLDGEFDD-DDEDEEIRYLEKLKTSRASV 331
               +   +    S      +RKS R SK+RVLD E D  DD+DEEI++L ++K ++   
Sbjct: 226 ----SDSCNDTRDSKANTNPIRKSNRISKRRVLDEELDSLDDDDEEIQFLRRMKMAKVVA 285

Query: 332 GYR--EDGEGPTKKQRKLSSI-----------------SSMENYGASKHDKDY-----EE 391
                +D E  T+K +KLS +                 +  +  G +  D DY     EE
Sbjct: 286 VEEDVDDDEDRTRKHKKLSKVMKQNVEFPRGVGTSEKSAKKDKMGKAFDDADYVKDDDEE 345

Query: 392 EEDSASEGDVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGASLIEFPN 451
           EE++ S+ ++E    + R+ + +   + K EMT+TTR+R         S    +LIEFP 
Sbjct: 346 EEEAVSDVELENKSARTRRGAEEGQSEVKTEMTVTTRRR---------SGHSGNLIEFPR 405

Query: 452 GLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKRE 511
           GLPPAPPRK+KE   +V+QQLKKAEAAQRR++QVEKAARESEAEAIRKILGQDSSRKK+E
Sbjct: 406 GLPPAPPRKRKENGLEVDQQLKKAEAAQRRKLQVEKAARESEAEAIRKILGQDSSRKKKE 465

Query: 512 DKMKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQPCSYPPRR 566
           DK+KKRQE+ A+EKAA++    S+T++WVMGPSGT+VTF  ++GLPS+F+S P SYPP R
Sbjct: 466 DKIKKRQEDKAKEKAADSIARRSDTVKWVMGPSGTIVTFPEELGLPSIFNSTPHSYPPPR 525

[Close]

BLAST of MS012102.1 vs. TAIR 10
Match: AT1G56460.1 (HIT zinc finger ;PAPA-1-like conserved region )

HSP 1 Score: 279.3 bits (713), Expect = 7.2e-75
Identity = 222/529 (41.97%), Postives = 298/529 (56.33%), Query Frame = 0


Query: 78  SRGSSASGAESEQFLKRSKKDGSF--NSYYRSEPGRSANDNKRSSEGVLAPANWRSTSKV 137
           S  SSA+  +    L+R   D     +S   S P    N+NK      +      S    
Sbjct: 10  SNTSSATKKKRSTTLRRPWNDRQLQDSSSLPSTPVADNNENKIEEREAV-----ESDEGS 69

Query: 138 SDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGND-------------NKVKKVKLK 197
           ++G    S+ +     R GG  S++  +G  V     D             N +KKVKLK
Sbjct: 70  TNGSFQGSNQV-----RQGGGHSTASTEGFLVPSKKKDTIDTTERRAGFDENIIKKVKLK 129

Query: 198 VGGVTRTIQAPSPPNGASK-GSGSTKNSHPSDVHRQQHKQNFQENYNGNHSPSDKRSGLH 257
           +GG ++TI   S  +GAS  G  STK+SH SD       Q +QE  N      ++ + L 
Sbjct: 130 LGGSSKTINIISASDGASDIGLCSTKSSHASD-DALGIGQTYQEISN------ERSTKLR 189

Query: 258 GIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKLGESLRKSKRASKKRVLDGEFDD-DDED 317
           G P    SK           +   +    S      +RKS R SK+RVLD E D  DD+D
Sbjct: 190 GTPLDTASK-----------SDSCNDTRDSKANTNPIRKSNRISKRRVLDEELDSLDDDD 249

Query: 318 EEIRYLEKLKTSRASVGYR--EDGEGPTKKQRKLSSI-----------------SSMENY 377
           EEI++L ++K ++        +D E  T+K +KLS +                 +  +  
Sbjct: 250 EEIQFLRRMKMAKVVAVEEDVDDDEDRTRKHKKLSKVMKQNVEFPRGVGTSEKSAKKDKM 309

Query: 378 GASKHDKDY-----EEEEDSASEGDVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSS 437
           G +  D DY     EEEE++ S+ ++E    + R+ + +   + K EMT+TTR+R     
Sbjct: 310 GKAFDDADYVKDDDEEEEEAVSDVELENKSARTRRGAEEGQSEVKTEMTVTTRRR----- 369

Query: 438 KDASSARGASLIEFPNGLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAE 497
               S    +LIEFP GLPPAPPRK+KE   +V+QQLKKAEAAQRR++QVEKAARESEAE
Sbjct: 370 ----SGHSGNLIEFPRGLPPAPPRKRKENGLEVDQQLKKAEAAQRRKLQVEKAARESEAE 429

Query: 498 AIRKILGQDSSRKKREDKMKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMG 557
           AIRKILGQDSSRKK+EDK+KKRQE+ A+EKAA++    S+T++WVMGPSGT+VTF  ++G
Sbjct: 430 AIRKILGQDSSRKKKEDKIKKRQEDKAKEKAADSIARRSDTVKWVMGPSGTIVTFPEELG 489

Query: 558 LPSLFDSQPCSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAIQ 566
           LPS+F+S P SYPP RE CAGP C+NPYKYRDS+S LPLCSL CYKAI+
Sbjct: 490 LPSIFNSTPHSYPPPRERCAGPECTNPYKYRDSESNLPLCSLRCYKAIK 501

[Close]

BLAST of MS012102.1 vs. TAIR 10
Match: AT3G06660.1 (PAPA-1-like family protein / zinc finger (HIT type) family protein )

HSP 1 Score: 246.5 bits (628), Expect = 5.1e-65
Identity = 192/406 (47.29%), Postives = 239/406 (58.87%), Query Frame = 0


Query: 169 GLGNDNKVKKVKLKVG-GVTRTIQAPSPPNGASKGSGSTKNSHPSDVHRQQHKQNFQENY 228
           G  ++NK+ KVKLK+G GVTRT+Q  S     +K   + +    S V    H Q  +  +
Sbjct: 66  GSVSENKL-KVKLKLGAGVTRTLQTNSEAGTYTKALDNGQKPFQSKVKGNGHVQ--KTLF 125

Query: 229 NGNHSPSDKRSGLHGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKLGESLRKSKRASKK 288
            G+   S       G P    SK   G    E                    KSKR  KK
Sbjct: 126 LGDIHQS------RGYP----SKTENGASMSE--------------------KSKRGLKK 185

Query: 289 RVLDGEFDDDDEDEEIRYLEKLKTSRASVGYR-EDGEGPTKKQRKLSSISSMENYGASKH 348
           RVLD E D DD DEEIRYL KLK+ R  V +  ++ EG     R++ S         S H
Sbjct: 186 RVLDPEPDSDDGDEEIRYLVKLKSKRVGVSHEGKESEG----GRRIHS---------SGH 245

Query: 349 DKDYEEEEDSASEGDVEVNHKKQRKESIDVLMDGKREMTL-TTRQRALQSSKDASSARGA 408
             D E+ +  +S+       KK     +D L  G+    + TTR RALQS KD  S   +
Sbjct: 246 --DMEDGKHLSSDKLAVSGRKKPVMGMVDPLPAGETSGQIPTTRTRALQSGKDPHSVIRS 305

Query: 409 SLIEFPNGLPPAPPRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQD 468
           S +EFP+GLP    ++ K+KL++VEQQ KKAEAAQRRRMQ EKAA+E+EAEAIRKILGQD
Sbjct: 306 SSLEFPDGLPCPSSKRPKQKLSEVEQQSKKAEAAQRRRMQCEKAAQEAEAEAIRKILGQD 365

Query: 469 SSRKKREDKMKKRQEELAQEKAANAQKLLSNTIRWVMGPSGTVVTFSNDMGLPSLFDSQP 528
           S RKKRE+K+KK+QEE AQE+AA +  L SNTIR V+GPSGT +TFS D+GLP +F    
Sbjct: 366 SGRKKREEKIKKQQEERAQERAARSSTLASNTIRLVIGPSGTTMTFSEDIGLPDIFKPVT 423

Query: 529 CSYPPRRENCAGPSCSNPYKYRDSKSKLPLCSLVCYKAIQEQLTEA 572
            SYPP RE C GP+C   YKYRDSKSKLPLCSL CY AIQE++ +A
Sbjct: 426 YSYPPPREKCVGPNCEKAYKYRDSKSKLPLCSLGCYNAIQEKMEQA 423

[Close]

BLAST of MS012102.1 vs. TAIR 10
Match: AT2G47350.2 (HIT zinc finger ;PAPA-1-like conserved region )

HSP 1 Score: 178.3 bits (451), Expect = 1.7e-44
Identity = 179/456 (39.25%), Postives = 244/456 (53.51%), Query Frame = 0


Query: 1   MEEFGPSGVYG-TSTMRRKRSRTSRRPRLESQQFAEGLDPSPSSSTPPSDDAVKFSSDEN 60
           ME+ G +   G T+T+R+KRS T RRPR           P  SS    SD   K SSD+ 
Sbjct: 1   MEDNGVAYCDGMTNTVRKKRSLTCRRPR-----------PEGSSVLTSSDRFSKISSDDI 60

Query: 61  GGGDGNSRRKELSLNQCVSRGSSASGAESEQFLKRSKKDGSFNSYYRSEPGRSANDNKRS 120
              D N RRKE SL+ C+SR  S   AESE+           N + R E     N NKRS
Sbjct: 61  PAFDTNPRRKEFSLSHCISRAESI--AESER---------GNNDFRRRE---IINRNKRS 120

Query: 121 SEGVLAPANWRSTSKVSDGIESESSSIDPYGGRYGGESSSSGQKGLFVEGLGNDNKVKKV 180
           +EGVLAPA+ +  S+  +G            G   G+ + SG+    +EG     + K++
Sbjct: 121 TEGVLAPASSKYPSREVEG-----------NGMINGKGTDSGE----LEG-----ETKRM 180

Query: 181 KLKVGGVTRTIQAPSPPNGASKGSGSTKNSHP-SDVHRQQHKQNFQENYNGNHSPSDKRS 240
           KLK+GGV+R + A    NG+S+     K+S P +D  R  H  + QE+    +SP DK++
Sbjct: 181 KLKIGGVSRLVHA----NGSSR-----KSSKPVTDTIRSNH--DLQESSEDCNSPLDKKA 240

Query: 241 GLHGIPWRDFSKGGFGVEKEEPLTGKVSGRNSSGKLGESLRKSKRASKKRVLDGEFDDDD 300
            L G+ W            +  + G ++GR    +    +RKSKRA KKRV D    DDD
Sbjct: 241 DLEGVTW------------DAEIDGSMTGRRKQEEPSGLVRKSKRAPKKRVFD---SDDD 300

Query: 301 EDEEIRYLEKLKTSRASVGYREDGEGPTKKQRKLSSISSMENYGASKHDKDYEEEEDSAS 360
            D+EIRYLEKLK  R SV   +   G  +KQ   S I++ EN G  K   +   E+   +
Sbjct: 301 SDDEIRYLEKLKYKRVSVCNEDTESG--RKQLTPSGITNGENSGKKKAVSEQASEDMDCA 360

Query: 361 EGDVEVNHKKQRKESIDVLMDGKREMTLTTRQRALQSSKDASSARGASLIEFPNGLPPAP 420
           E   E+      KE   +  D KRE T+T+RQRAL S +       +S I+F +GLPP  
Sbjct: 361 E---EIETASDEKE---IGNDNKRESTMTSRQRALASGR-------SSAIDFSDGLPPT- 369

Query: 421 PRKQKEKLTDVEQQLKKAEAAQRRRMQVEKAARESE 455
            R++KE L+++EQQLKKAEAAQRR++Q+EKAARESE
Sbjct: 421 SRRKKETLSEMEQQLKKAEAAQRRKVQIEKAARESE 369

The following BLAST results are available for this feature:

BLAST of MS012102.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150978.1	4.4e-310	99.65	INO80 complex subunit B [Momordica charantia]	[more]
XP_023004495.1	2.8e-275	88.10	uncharacterized protein LOC111497783 [Cucurbita maxima]	[more]
XP_022959650.1	1.4e-274	87.76	uncharacterized protein LOC111460665 [Cucurbita moschata] >KAG6593245.1 hypothet...	[more]
KAG7025595.1	4.1e-274	87.59	hypothetical protein SDJN02_12092, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023514963.1	7.0e-274	87.41	uncharacterized protein LOC111779121 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS012102.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS012102.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAX2	2.1e-310	99.65	INO80 complex subunit B OS=Momordica charantia OX=3673 GN=LOC111018998 PE=4 SV=1	[more]
A0A6J1KUR2	1.4e-275	88.10	uncharacterized protein LOC111497783 OS=Cucurbita maxima OX=3661 GN=LOC111497783...	[more]
A0A6J1H6W4	6.8e-275	87.76	uncharacterized protein LOC111460665 OS=Cucurbita moschata OX=3662 GN=LOC1114606...	[more]
A0A6J1GPW0	6.2e-268	85.69	INO80 complex subunit B-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0K5U0	1.4e-267	86.28	PAPA-1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G407730 PE=4...	[more]

BLAST of MS012102.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47350.1	3.1e-86	44.46	HIT zinc finger ;PAPA-1-like conserved region	[more]
AT1G56460.2	3.4e-77	45.47	HIT zinc finger ;PAPA-1-like conserved region	[more]
AT1G56460.1	7.2e-75	41.97	HIT zinc finger ;PAPA-1-like conserved region	[more]
AT3G06660.1	5.1e-65	47.29	PAPA-1-like family protein / zinc finger (HIT type) family protein	[more]
AT2G47350.2	1.7e-44	39.25	HIT zinc finger ;PAPA-1-like conserved region	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 468..496
None	No IPR available	COILS	Coil	Coil	coord: 429..456
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 459..484
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..386
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 387..402
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 303..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..424
None	No IPR available	PANTHER	PTHR21561:SF14	HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN	coord: 1..569
IPR006880	INO80 complex subunit B-like conserved region	SMART	SM01406	PAPA_1_2	coord: 430..515 e-value: 2.6E-33 score: 126.7
IPR006880	INO80 complex subunit B-like conserved region	PFAM	PF04795	PAPA-1	coord: 430..515 e-value: 6.5E-21 score: 74.9
IPR007529	Zinc finger, HIT-type	PFAM	PF04438	zf-HIT	coord: 531..562 e-value: 7.9E-6 score: 25.6
IPR029523	INO80 complex, subunit Ies2	PANTHER	PTHR21561	INO80 COMPLEX SUBUNIT B	coord: 1..569

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS012102	MS012102	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS012102.1-cds	MS012102.1-cds-scaffold708:332608..333279	CDS
MS012102.1-cds	MS012102.1-cds-scaffold708:333628..334216	CDS
MS012102.1-cds	MS012102.1-cds-scaffold708:334356..334456	CDS
MS012102.1-cds	MS012102.1-cds-scaffold708:334555..334644	CDS
MS012102.1-cds	MS012102.1-cds-scaffold708:334741..334868	CDS
MS012102.1-cds	MS012102.1-cds-scaffold708:334973..335111	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS012102.1	MS012102.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006338	chromatin remodeling
cellular_component	GO:0031011	Ino80 complex