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MS006244.1 (mRNA) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCTTCTTCTTCTCAAGGTCTTTCCATAGAGAGCTTCTCCTACAGCTGGTTGGTGAACATCAAATCATCCTTCAGAAAAACCTCCCTCGATGAAGCTTCCTTCATCGAGATGGATCCCACAATGCCACCCTCCAAGAGATTCTTCACCTCGGACTTCAACTTTCCCGCCCTCGCCCCGTCCCCGACCTCTCTCCCTCTCGTCCACGCCGACCACCTCATCTCCGACGGCTATATTGTCACTGTAAGTCGTCTGCTATTGACTTTTTAGAATTGAAAGATTTATATAAAAAGTTACGACGCCTTGTTATGTCAAGTTGCAGGCGTGTGAGGCCACGACGGCAGCCATTTCTAACTCTTTGCCTGTTGTTATGCTCGCGGGGGACGCGCCGGGGAAGCCCGAGTCGTCGTGCTCGGTGAGAAAGGCGTGGCGGAGATTGTCGAGGCAGATTTTTCAGAAGTATTTGAACTTTCTGAGGCCCCTTTGCAGAAAGATTCAAGGGGAGAAGTTGTTCAATGGAGGATCTCGCCACCCAATTACAAGAGAAGCTTCTTGGTCTAATCAGTGTTGTGATGAGTGGAGAAGATCTTGTGATTCTGAGAGCTCAATTTATGAGGCAGTTCTCCACTGCAAGAGATCCATAGGTGTGTGCCTCTCACTTTTCATTAAT ATGGAAGCTTCTTCTTCTCAAGGTCTTTCCATAGAGAGCTTCTCCTACAGCTGGTTGGTGAACATCAAATCATCCTTCAGAAAAACCTCCCTCGATGAAGCTTCCTTCATCGAGATGGATCCCACAATGCCACCCTCCAAGAGATTCTTCACCTCGGACTTCAACTTTCCCGCCCTCGCCCCGTCCCCGACCTCTCTCCCTCTCGTCCACGCCGACCACCTCATCTCCGACGGCTATATTGTCACTTTGCAGGCGTGTGAGGCCACGACGGCAGCCATTTCTAACTCTTTGCCTGTTGTTATGCTCGCGGGGGACGCGCCGGGGAAGCCCGAGTCGTCGTGCTCGGTGAGAAAGGCGTGGCGGAGATTGTCGAGGCAGATTTTTCAGAAGTATTTGAACTTTCTGAGGCCCCTTTGCAGAAAGATTCAAGGGGAGAAGTTGTTCAATGGAGGATCTCGCCACCCAATTACAAGAGAAGCTTCTTGGTCTAATCAGTGTTGTGATGAGTGGAGAAGATCTTGTGATTCTGAGAGCTCAATTTATGAGGCAGTTCTCCACTGCAAGAGATCCATAGGTGTGTGCCTCTCACTTTTCATTAAT ATGGAAGCTTCTTCTTCTCAAGGTCTTTCCATAGAGAGCTTCTCCTACAGCTGGTTGGTGAACATCAAATCATCCTTCAGAAAAACCTCCCTCGATGAAGCTTCCTTCATCGAGATGGATCCCACAATGCCACCCTCCAAGAGATTCTTCACCTCGGACTTCAACTTTCCCGCCCTCGCCCCGTCCCCGACCTCTCTCCCTCTCGTCCACGCCGACCACCTCATCTCCGACGGCTATATTGTCACTTTGCAGGCGTGTGAGGCCACGACGGCAGCCATTTCTAACTCTTTGCCTGTTGTTATGCTCGCGGGGGACGCGCCGGGGAAGCCCGAGTCGTCGTGCTCGGTGAGAAAGGCGTGGCGGAGATTGTCGAGGCAGATTTTTCAGAAGTATTTGAACTTTCTGAGGCCCCTTTGCAGAAAGATTCAAGGGGAGAAGTTGTTCAATGGAGGATCTCGCCACCCAATTACAAGAGAAGCTTCTTGGTCTAATCAGTGTTGTGATGAGTGGAGAAGATCTTGTGATTCTGAGAGCTCAATTTATGAGGCAGTTCTCCACTGCAAGAGATCCATAGGTGTGTGCCTCTCACTTTTCATTAAT MEASSSQGLSIESFSYSWLVNIKSSFRKTSLDEASFIEMDPTMPPSKRFFTSDFNFPALAPSPTSLPLVHADHLISDGYIVTLQACEATTAAISNSLPVVMLAGDAPGKPESSCSVRKAWRRLSRQIFQKYLNFLRPLCRKIQGEKLFNGGSRHPITREASWSNQCCDEWRRSCDSESSIYEAVLHCKRSIGVCLSLFIN Homology
BLAST of MS006244.1 vs. NCBI nr
Match: XP_022157164.1 (probable membrane-associated kinase regulator 6 isoform X1 [Momordica charantia]) HSP 1 Score: 383.3 bits (983), Expect = 1.3e-102 Identity = 189/192 (98.44%), Postives = 191/192 (99.48%), Query Frame = 0
BLAST of MS006244.1 vs. NCBI nr
Match: XP_022157165.1 (probable membrane-associated kinase regulator 6 isoform X2 [Momordica charantia]) HSP 1 Score: 374.8 bits (961), Expect = 4.7e-100 Identity = 187/192 (97.40%), Postives = 189/192 (98.44%), Query Frame = 0
BLAST of MS006244.1 vs. NCBI nr
Match: XP_023532781.1 (probable membrane-associated kinase regulator 6 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 219.2 bits (557), Expect = 3.3e-53 Identity = 132/208 (63.46%), Postives = 153/208 (73.56%), Query Frame = 0
BLAST of MS006244.1 vs. NCBI nr
Match: KAG6605752.1 (putative membrane-associated kinase regulator 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 219.2 bits (557), Expect = 3.3e-53 Identity = 133/208 (63.94%), Postives = 153/208 (73.56%), Query Frame = 0
BLAST of MS006244.1 vs. NCBI nr
Match: XP_022958335.1 (probable membrane-associated kinase regulator 6 [Cucurbita moschata]) HSP 1 Score: 217.2 bits (552), Expect = 1.3e-52 Identity = 127/208 (61.06%), Postives = 147/208 (70.67%), Query Frame = 0
BLAST of MS006244.1 vs. ExPASy Swiss-Prot
Match: Q84JK8 (Probable membrane-associated kinase regulator 6 OS=Arabidopsis thaliana OX=3702 GN=MAKR6 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.2e-21 Identity = 81/220 (36.82%), Postives = 108/220 (49.09%), Query Frame = 0
BLAST of MS006244.1 vs. ExPASy TrEMBL
Match: A0A6J1DVQ6 (probable membrane-associated kinase regulator 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023947 PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 6.4e-103 Identity = 189/192 (98.44%), Postives = 191/192 (99.48%), Query Frame = 0
BLAST of MS006244.1 vs. ExPASy TrEMBL
Match: A0A6J1DSC2 (probable membrane-associated kinase regulator 6 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023947 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 2.3e-100 Identity = 187/192 (97.40%), Postives = 189/192 (98.44%), Query Frame = 0
BLAST of MS006244.1 vs. ExPASy TrEMBL
Match: A0A6J1H366 (probable membrane-associated kinase regulator 6 OS=Cucurbita moschata OX=3662 GN=LOC111459584 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 6.1e-53 Identity = 127/208 (61.06%), Postives = 147/208 (70.67%), Query Frame = 0
BLAST of MS006244.1 vs. ExPASy TrEMBL
Match: A0A6J1KAI2 (probable membrane-associated kinase regulator 6 OS=Cucurbita maxima OX=3661 GN=LOC111491598 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 2.3e-52 Identity = 125/206 (60.68%), Postives = 145/206 (70.39%), Query Frame = 0
BLAST of MS006244.1 vs. ExPASy TrEMBL
Match: A0A6J1I6H8 (probable membrane-associated kinase regulator 6 OS=Cucurbita maxima OX=3661 GN=LOC111471562 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 3.0e-52 Identity = 131/208 (62.98%), Postives = 151/208 (72.60%), Query Frame = 0
BLAST of MS006244.1 vs. TAIR 10
Match: AT5G52900.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 104.8 bits (260), Expect = 8.4e-23 Identity = 81/220 (36.82%), Postives = 108/220 (49.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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