MS005700.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS005700.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	AT-hook motif nuclear-localized protein
Location	scaffold254: 914691 .. 916225 (-)
Sequence length	816
RNA-Seq Expression	MS005700.1
Synteny	MS005700.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGCTTAGACTTGGGTTCTGCTTCCCACTTCGTCCACCAGCTGCAGCACCGCCCCGTGGATCTCCACCTCCGGAGGCCGCCGGACGGAGGCGACGACGGCTCCGACCAGTTCCACGGCGGCGATAATGAAGAGCACATGAGCAACTCCCAGCAACCAAACTCCGGCGGAGAAATCGTGGGGCGGCGGCCGAGGGGCCGCCCGCCCGGTTCGAAAAACAAGCAGAAACCGCCGGTGATCATCACCAGAGAAAGCGCCAACACGTTGCGGGCCCACATCTTGGAAGTCAACTCCGGCTGCGATATCTTTGACTCCGTCGCCACGTACGCCCGTAAGCGCCAGCGGGGGATCTGTGTTTTGAGCGGCTCCGGCGCCGTCACCAACGTCACCCTCCGCCAACCCGCCTCCGCCGGAGCTGTCCTCACCCTCCATGGCAGGTATTTTATCTTTTTTTTATTCTTCTTTTTTTAATACACAGAACTTTTATTAATTCATATTATTAATCTTTTAATTAACTCCTCCCAAAAATTTATAAATTATTTCAGAAAAATATTCTGGCAATCGCCATTAAATTAAGTAATGTTTCGATTTCTCCTCTATTGTTTTCAATTTAATTAAAAAACTTTGAACTTGTTTCTCATTTTTTAGAAATATTCTTAAAATTATATGCAAAATTTTGAAAACAATAAAAACAAATTTTTTATTTCTTATTTCTTTATAATTTATAATTTATTTTAAATATTGTTCATACAACCTTTTTTTTTAAGAAAACAGAAGCGAAACGGACCTTTAAATATTGTTCTTATTATGAAGGGATTGAATTCAAGTTATTCTATATTTATAAATACTTAAAGTGCTGATTTTCATATTAAATTGTTGACAAATTAAAAAGATAAATATAAAAATTGAAAATTAAACAAATTAATAAACTATCAATTTTTTTTTAGATAGAAATATGTGCTTAATATTTGTTTGTTGTAGCTGATTTTAAACCAGCATCTAAGAGCTGTACGGTGATTATACTATTGAATAATTTTTCTCGTTTGAAAGAAATAAAGAACTCGACTATTAATTGAAGAGAAAACAATATTTACAAACTAAATTATTATTAAATCCAAAAAGTCTAAATTAATAGGTTATTAATTTTTGTTAACAGGTATGAGATATTGTCCTTGTCGGGGTCGTTCTTACCGCCGCCGGCTCCGCCGGGCGCCACGAGTTTGACAATCTTTCTGGCCGGAGGGCAAGGGCAGATCGTCGGAGGGAATGTCGTCGGCTCTTTGATTGCTTCCGGACCGGTGATCGTCATCGCTTCATCGTTCACCAACGTCGCCTACGAGAGGCTGCCGTTGGACGAGGAGGAGCCGTCCAACGGCGGAGGTGGCGGCGGAGGGAGCCTCAGCAACCCATTTCCCGACCCGTCGGCCGCCGGTTTGCCATTCTTCAATCTGCCGATGAATATGACGGCAAATCAAAGTCAGCTGCCGGTGGACGGATGGGGAGAAGGAAACTCCGGCGGGAGAGCATCTTAT

mRNA sequence

ATGGCGGGCTTAGACTTGGGTTCTGCTTCCCACTTCGTCCACCAGCTGCAGCACCGCCCCGTGGATCTCCACCTCCGGAGGCCGCCGGACGGAGGCGACGACGGCTCCGACCAGTTCCACGGCGGCGATAATGAAGAGCACATGAGCAACTCCCAGCAACCAAACTCCGGCGGAGAAATCGTGGGGCGGCGGCCGAGGGGCCGCCCGCCCGGTTCGAAAAACAAGCAGAAACCGCCGGTGATCATCACCAGAGAAAGCGCCAACACGTTGCGGGCCCACATCTTGGAAGTCAACTCCGGCTGCGATATCTTTGACTCCGTCGCCACGTACGCCCGTAAGCGCCAGCGGGGGATCTGTGTTTTGAGCGGCTCCGGCGCCGTCACCAACGTCACCCTCCGCCAACCCGCCTCCGCCGGAGCTGTCCTCACCCTCCATGGCAGGTATGAGATATTGTCCTTGTCGGGGTCGTTCTTACCGCCGCCGGCTCCGCCGGGCGCCACGAGTTTGACAATCTTTCTGGCCGGAGGGCAAGGGCAGATCGTCGGAGGGAATGTCGTCGGCTCTTTGATTGCTTCCGGACCGGTGATCGTCATCGCTTCATCGTTCACCAACGTCGCCTACGAGAGGCTGCCGTTGGACGAGGAGGAGCCGTCCAACGGCGGAGGTGGCGGCGGAGGGAGCCTCAGCAACCCATTTCCCGACCCGTCGGCCGCCGGTTTGCCATTCTTCAATCTGCCGATGAATATGACGGCAAATCAAAGTCAGCTGCCGGTGGACGGATGGGGAGAAGGAAACTCCGGCGGGAGAGCATCTTAT

Coding sequence (CDS)

ATGGCGGGCTTAGACTTGGGTTCTGCTTCCCACTTCGTCCACCAGCTGCAGCACCGCCCCGTGGATCTCCACCTCCGGAGGCCGCCGGACGGAGGCGACGACGGCTCCGACCAGTTCCACGGCGGCGATAATGAAGAGCACATGAGCAACTCCCAGCAACCAAACTCCGGCGGAGAAATCGTGGGGCGGCGGCCGAGGGGCCGCCCGCCCGGTTCGAAAAACAAGCAGAAACCGCCGGTGATCATCACCAGAGAAAGCGCCAACACGTTGCGGGCCCACATCTTGGAAGTCAACTCCGGCTGCGATATCTTTGACTCCGTCGCCACGTACGCCCGTAAGCGCCAGCGGGGGATCTGTGTTTTGAGCGGCTCCGGCGCCGTCACCAACGTCACCCTCCGCCAACCCGCCTCCGCCGGAGCTGTCCTCACCCTCCATGGCAGGTATGAGATATTGTCCTTGTCGGGGTCGTTCTTACCGCCGCCGGCTCCGCCGGGCGCCACGAGTTTGACAATCTTTCTGGCCGGAGGGCAAGGGCAGATCGTCGGAGGGAATGTCGTCGGCTCTTTGATTGCTTCCGGACCGGTGATCGTCATCGCTTCATCGTTCACCAACGTCGCCTACGAGAGGCTGCCGTTGGACGAGGAGGAGCCGTCCAACGGCGGAGGTGGCGGCGGAGGGAGCCTCAGCAACCCATTTCCCGACCCGTCGGCCGCCGGTTTGCCATTCTTCAATCTGCCGATGAATATGACGGCAAATCAAAGTCAGCTGCCGGTGGACGGATGGGGAGAAGGAAACTCCGGCGGGAGAGCATCTTAT

Protein sequence

MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSGGEIVGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICVLSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQIVGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEPSNGGGGGGGSLSNPFPDPSAAGLPFFNLPMNMTANQSQLPVDGWGEGNSGGRASY

Homology

[Close]

BLAST of MS005700.1 vs. NCBI nr
Match: XP_022147063.1 (AT-hook motif nuclear-localized protein 23-like [Momordica charantia])

HSP 1 Score: 539.7 bits (1389), Expect = 1.5e-149
Identity = 271/272 (99.63%), Postives = 271/272 (99.63%), Query Frame = 0


Query: 1   MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSGGEI 60
           MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSGGEI
Sbjct: 1   MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSGGEI 60

Query: 61  VGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICV 120
           VGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICV
Sbjct: 61  VGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICV 120

Query: 121 LSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQI 180
           LSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQI
Sbjct: 121 LSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQI 180

Query: 181 VGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEPSNGGGGGGGSLSNPFPDPSAAGL 240
           VGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEPSNGGGG GGSLSNPFPDPSAAGL
Sbjct: 181 VGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEPSNGGGGCGGSLSNPFPDPSAAGL 240

Query: 241 PFFNLPMNMTANQSQLPVDGWGEGNSGGRASY 273
           PFFNLPMNMTANQSQLPVDGWGEGNSGGRASY
Sbjct: 241 PFFNLPMNMTANQSQLPVDGWGEGNSGGRASY 272

[Close]

BLAST of MS005700.1 vs. NCBI nr
Match: XP_023528742.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 443.4 bits (1139), Expect = 1.5e-120
Identity = 231/272 (84.93%), Postives = 243/272 (89.34%), Query Frame = 0


Query: 1   MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSGGEI 60
           MAGLDLGSAS+FVHQLQHR VDLHL+RPPD GDDG DQFHG D+E       QPNSGGEI
Sbjct: 1   MAGLDLGSASNFVHQLQHRSVDLHLQRPPD-GDDGPDQFHGLDDE------HQPNSGGEI 60

Query: 61  VGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICV 120
           V RR RGRPPGSKNK KPPVIITRESANTLRAHILEVN+GCD+FDSVATYARKRQRGIC+
Sbjct: 61  VARRSRGRPPGSKNKPKPPVIITRESANTLRAHILEVNTGCDVFDSVATYARKRQRGICI 120

Query: 121 LSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQI 180
           LSG+G VTNVTLRQPAS GAVLTL GR+EILSLSGSFLPPPAPPGATSL+IFL GGQGQI
Sbjct: 121 LSGTGVVTNVTLRQPASGGAVLTLPGRFEILSLSGSFLPPPAPPGATSLSIFLGGGQGQI 180

Query: 181 VGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEPSNGGGGGGGSLSNPFPDPSAAGL 240
           VGGNV GSLIASGPV VI SSFTNVAYERLPLDEEEPSNGGGGGGGSLSNPFPDPS AGL
Sbjct: 181 VGGNVAGSLIASGPVTVIVSSFTNVAYERLPLDEEEPSNGGGGGGGSLSNPFPDPS-AGL 240

Query: 241 PFFNLPMNMTANQSQLPVDGWGEGNSGGRASY 273
           PF NLP+NM  NQ+QLPV+GW   NSGG ASY
Sbjct: 241 PFLNLPLNMPGNQNQLPVEGW---NSGGGASY 261

[Close]

BLAST of MS005700.1 vs. NCBI nr
Match: XP_022924649.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita moschata] >KAG6582536.1 AT-hook motif nuclear-localized protein 23, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018992.1 AT-hook motif nuclear-localized protein 23, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 441.0 bits (1133), Expect = 7.2e-120
Identity = 232/273 (84.98%), Postives = 244/273 (89.38%), Query Frame = 0


Query: 1   MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSGGEI 60
           MAGLDLGSAS+FVHQLQHR VDLHL+RPPD GDDGSDQFHG D+E      QQPNSGGEI
Sbjct: 1   MAGLDLGSASNFVHQLQHRSVDLHLQRPPD-GDDGSDQFHGLDDE------QQPNSGGEI 60

Query: 61  VGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICV 120
           V RR RGRPPGSKNK KPPVIITRESANTLRAHILEVN+GCD+FDSVATYARKRQRGIC+
Sbjct: 61  VARRSRGRPPGSKNKPKPPVIITRESANTLRAHILEVNTGCDVFDSVATYARKRQRGICI 120

Query: 121 LSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQI 180
           LSG+G VTNVTLRQPAS GAVLTL GR+EILSLSGSFLPPPAPPGATSL+IFL GGQGQI
Sbjct: 121 LSGTGVVTNVTLRQPASGGAVLTLPGRFEILSLSGSFLPPPAPPGATSLSIFLGGGQGQI 180

Query: 181 VGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEPSN-GGGGGGGSLSNPFPDPSAAG 240
           VGGNV GSLIASGPV VI SSFTNVAYERLPLDEEEPSN GGGGGGGSLSNPFPDPS  G
Sbjct: 181 VGGNVAGSLIASGPVTVIVSSFTNVAYERLPLDEEEPSNGGGGGGGGSLSNPFPDPS-VG 240

Query: 241 LPFFNLPMNMTANQSQLPVDGWGEGNSGGRASY 273
           LPF NLP+NM  NQ+QLPV+GW   NSGG ASY
Sbjct: 241 LPFLNLPLNMPGNQNQLPVEGW---NSGGGASY 262

[Close]

BLAST of MS005700.1 vs. NCBI nr
Match: XP_022980374.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita maxima])

HSP 1 Score: 432.2 bits (1110), Expect = 3.4e-117
Identity = 228/272 (83.82%), Postives = 240/272 (88.24%), Query Frame = 0


Query: 1   MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSGGEI 60
           MAGLDLGSAS+FVHQLQHR VDLHL+RPPD GDDG DQFHG D+E       QPNSGGEI
Sbjct: 1   MAGLDLGSASNFVHQLQHRSVDLHLQRPPD-GDDGPDQFHGLDDE------HQPNSGGEI 60

Query: 61  VGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICV 120
           V RR RGRPPGSKNK KPPVIITRESANTLRAHILEVN+GCD+FDSVATYARKRQRGIC+
Sbjct: 61  VARRSRGRPPGSKNKPKPPVIITRESANTLRAHILEVNTGCDVFDSVATYARKRQRGICI 120

Query: 121 LSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQI 180
           LSG+G VTNVTLRQPAS GAVLTL GR+EILSLSGSFLPPPAPPGATSL+IFL GGQGQI
Sbjct: 121 LSGTGVVTNVTLRQPASGGAVLTLPGRFEILSLSGSFLPPPAPPGATSLSIFLGGGQGQI 180

Query: 181 VGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEPSNGGGGGGGSLSNPFPDPSAAGL 240
           VGGNV GSLIASGPV VI SSFTNVAYERLPLDEEEPSN   GGGGSLSNPFPDPS AGL
Sbjct: 181 VGGNVAGSLIASGPVTVIVSSFTNVAYERLPLDEEEPSN---GGGGSLSNPFPDPS-AGL 240

Query: 241 PFFNLPMNMTANQSQLPVDGWGEGNSGGRASY 273
           PF NLP+NM  NQ+QLPV+GW   NSGG ASY
Sbjct: 241 PFLNLPLNMPGNQNQLPVEGW---NSGGGASY 258

[Close]

BLAST of MS005700.1 vs. NCBI nr
Match: XP_038876621.1 (AT-hook motif nuclear-localized protein 23-like [Benincasa hispida])

HSP 1 Score: 420.6 bits (1080), Expect = 1.0e-113
Identity = 225/273 (82.42%), Postives = 234/273 (85.71%), Query Frame = 0


Query: 1   MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSGGEI 60
           MAGLDLGSASHFVHQLQHR VDLHL+ P D  DDGSD               QPNSGGEI
Sbjct: 1   MAGLDLGSASHFVHQLQHRSVDLHLQHPTD-VDDGSD--------------HQPNSGGEI 60

Query: 61  VGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICV 120
           V RR RGRP GSKNK KPPVIITRESANTLRAHILEVN+GCD+FDSVATYARKRQRGIC+
Sbjct: 61  VARRSRGRPSGSKNKPKPPVIITRESANTLRAHILEVNTGCDVFDSVATYARKRQRGICI 120

Query: 121 LSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQI 180
           LSG+G VTNVTLRQPASAGAV+TL GR+EILSLSGSFLPPPAPPGATSLTIFLAGGQGQI
Sbjct: 121 LSGTGTVTNVTLRQPASAGAVVTLPGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQI 180

Query: 181 VGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEE-PSNGGGGGGGSLSNPFPDPSAAG 240
           +GGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEE PSN   GGG SLSNPFPDPS  G
Sbjct: 181 LGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEQPSN---GGGASLSNPFPDPS-VG 240

Query: 241 LPFFNLPMNMTANQSQLPVDGWGEGNSGGRASY 273
            P FNLP NM  NQ+QLPVDGWG GNSGGRASY
Sbjct: 241 FPLFNLPSNMAGNQNQLPVDGWGGGNSGGRASY 254

[Close]

BLAST of MS005700.1 vs. ExPASy Swiss-Prot
Match: O23620 (AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AHL23 PE=1 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 2.5e-91
Identity = 188/295 (63.73%), Postives = 217/295 (73.56%), Query Frame = 0


Query: 1   MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGD--DGSDQFHGGDNEEHMSNSQQ----- 60
           MAGLDLG+A  +V+   HRP DLHL       D   G+   H   ++E  +N+ Q     
Sbjct: 1   MAGLDLGTAFRYVNHQLHRP-DLHLHHNSSSDDVTPGAGMGHFTVDDEDNNNNHQGLDLA 60

Query: 61  -------------PNSGGEIVGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSG 120
                           GG++VGRRPRGRPPGSKNK KPPVIITRESANTLRAHILEV +G
Sbjct: 61  SGGGSGSSGGGGGHGGGGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVTNG 120

Query: 121 CDIFDSVATYARKRQRGICVLSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPP 180
           CD+FD VATYAR+RQRGICVLSGSG VTNV++RQP++AGAV+TL G +EILSLSGSFLPP
Sbjct: 121 CDVFDCVATYARRRQRGICVLSGSGTVTNVSIRQPSAAGAVVTLQGTFEILSLSGSFLPP 180

Query: 181 PAPPGATSLTIFLAGGQGQIVGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEPSNG 240
           PAPPGATSLTIFLAGGQGQ+VGG+VVG L A+GPVIVIA+SFTNVAYERLPL+E+E    
Sbjct: 181 PAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDEQQQQ 240

Query: 241 GGGGGGSLSNPFPDPSA---AGLPFFNLPMNMTANQSQLPVDGWGEGNSGGRASY 273
            GGG     N FP+ +A    GLPFFNLPMNM  N  QLPV+GW  GNSGGR  +
Sbjct: 241 LGGGSNGGGNLFPEVAAGGGGGLPFFNLPMNMQPN-VQLPVEGW-PGNSGGRGPF 292

[Close]

BLAST of MS005700.1 vs. ExPASy Swiss-Prot
Match: O82166 (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.8e-81
Identity = 172/292 (58.90%), Postives = 209/292 (71.58%), Query Frame = 0


Query: 1   MAGLDLGSASHFVHQLQ-----HRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMS---NSQ 60
           MAGLDLG+ S +VH +          D H     DGG  G+   H  ++  H      + 
Sbjct: 1   MAGLDLGTTSRYVHNVDGGGGGQFTTDNH--HEDDGGAGGNHHHHHHNHNHHQGLDLIAS 60

Query: 61  QPNSG---------GEIVGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDI 120
             NSG         G++V RRPRGRP GSKNK KPPVI+TRESANTLRAHILEV SGCD+
Sbjct: 61  NDNSGLGGGGGGGSGDLVMRRPRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDV 120

Query: 121 FDSVATYARKRQRGICVLSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAP 180
           F+ ++TYAR+RQRGICVLSG+G VTNV++RQP +AGAV+TL G +EILSLSGSFLPPPAP
Sbjct: 121 FECISTYARRRQRGICVLSGTGTVTNVSIRQPTAAGAVVTLRGTFEILSLSGSFLPPPAP 180

Query: 181 PGATSLTIFLAGGQGQIVGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEP--SNGG 240
           PGATSLTIFLAG QGQ+VGGNVVG L+A+GPV+V+A+SFTNVAYERLPLDE E    +GG
Sbjct: 181 PGATSLTIFLAGAQGQVVGGNVVGELMAAGPVMVMAASFTNVAYERLPLDEHEEHLQSGG 240

Query: 241 GGGGGSLSNPFPDPSAAGLPFFNLPMNMTANQSQLPVDGWGEGNSG-GRASY 273
           GGGGG++ +        GLPFFNLPM+M     Q+ V+ W   ++G GRA +
Sbjct: 241 GGGGGNMYSE-ATGGGGGLPFFNLPMSM----PQIGVESWQGNHAGAGRAPF 285

[Close]

BLAST of MS005700.1 vs. ExPASy Swiss-Prot
Match: Q9SZ70 (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.0e-63
Identity = 126/217 (58.06%), Postives = 166/217 (76.50%), Query Frame = 0


Query: 18  HRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSG----GEIVGRRPRGRPPGSK 77
           +R + +      D  D+ ++   G + +E   +  +  SG    GE + RRPRGRP GSK
Sbjct: 69  NRSIKMDREETSDNMDNIANTNSGSEGKEMSLHGGEGGSGGGGSGEQMTRRPRGRPAGSK 128

Query: 78  NKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICVLSGSGAVTNVTLR 137
           NK K P+IITR+SAN LR H++E+  GCDI D +AT+AR+RQRG+CV+SG+G+VTNVT+R
Sbjct: 129 NKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVMSGTGSVTNVTIR 188

Query: 138 QPAS-AGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQIVGGNVVGSLIAS 197
           QP S  G+V++LHGR+EILSLSGSFLPPPAPP AT L+++LAGGQGQ+VGG+VVG L+ S
Sbjct: 189 QPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQGQVVGGSVVGPLLCS 248

Query: 198 GPVIVIASSFTNVAYERLPLDEEE---PSNGGGGGGG 227
           GPV+V+A+SF+N AYERLPL+E+E   P  GGGGGGG
Sbjct: 249 GPVVVMAASFSNAAYERLPLEEDEMQTPVQGGGGGGG 285

[Close]

BLAST of MS005700.1 vs. ExPASy Swiss-Prot
Match: O49662 (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.7e-63
Identity = 126/208 (60.58%), Postives = 161/208 (77.40%), Query Frame = 0


Query: 30  DGGDDGSD-QFHGGDNEEHMSNSQQPNSGGEIVGRRPRGRPPGSKNKQKPPVIITRESAN 89
           + G +G D   HGG  E         + G   + RRPRGRP GSKNK KPP+IITR+SAN
Sbjct: 76  NSGSEGKDIDIHGGSGE-----GGGGSGGDHQMTRRPRGRPAGSKNKPKPPIIITRDSAN 135

Query: 90  TLRAHILEVNSGCDIFDSVATYARKRQRGICVLSGSGAVTNVTLRQPA---SAGAVLTLH 149
            LR H++E+  GCD+ +SVAT+AR+RQRG+CV+SG+G VTNVT+RQP    S G+V++LH
Sbjct: 136 ALRTHVMEIGDGCDLVESVATFARRRQRGVCVMSGTGNVTNVTIRQPGSHPSPGSVVSLH 195

Query: 150 GRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQIVGGNVVGSLIASGPVIVIASSFTNV 209
           GR+EILSLSGSFLPPPAPP AT L+++LAGGQGQ+VGG+VVG L+ +GPV+V+A+SF+N 
Sbjct: 196 GRFEILSLSGSFLPPPAPPTATGLSVYLAGGQGQVVGGSVVGPLLCAGPVVVMAASFSNA 255

Query: 210 AYERLPLDEEEPSN--GGGGGGGSLSNP 232
           AYERLPL+E+E      GGGGGGSL +P
Sbjct: 256 AYERLPLEEDEMQTPVHGGGGGGSLESP 278

[Close]

BLAST of MS005700.1 vs. ExPASy Swiss-Prot
Match: Q9S7C9 (AT-hook motif nuclear-localized protein 27 OS=Arabidopsis thaliana OX=3702 GN=AHL27 PE=1 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.9e-62
Identity = 142/293 (48.46%), Postives = 181/293 (61.77%), Query Frame = 0


Query: 7   GSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQ-------------- 66
           G AS + H L  RP   H +  P GG +  DQ H   +++H    Q              
Sbjct: 9   GGASRYFHNL-FRPEIHHQQLQPQGGINLIDQHH-HQHQQHQQQQQPSDDSRESDHSNKD 68

Query: 67  ---------QPNSGGEIVGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDI 126
                     PN+     G+RPRGRPPGSKNK KPP+I+TR+S N LR+H+LEV+ G DI
Sbjct: 69  HHQQGRPDSDPNTSSSAPGKRPRGRPPGSKNKAKPPIIVTRDSPNALRSHVLEVSPGADI 128

Query: 127 FDSVATYARKRQRGICVLSGSGAVTNVTLRQP---------ASAGAVLTLHGRYEILSLS 186
            +SV+TYAR+R RG+ VL G+G V+NVTLRQP         +  G V+TLHGR+EILSL+
Sbjct: 129 VESVSTYARRRGRGVSVLGGNGTVSNVTLRQPVTPGNGGGVSGGGGVVTLHGRFEILSLT 188

Query: 187 GSFLPPPAPPGATSLTIFLAGGQGQIVGGNVVGSLIASGPVIVIASSFTNVAYERLPLDE 246
           G+ LPPPAPPGA  L+IFLAGGQGQ+VGG+VV  LIAS PVI++A+SF+N  +ERLP++E
Sbjct: 189 GTVLPPPAPPGAGGLSIFLAGGQGQVVGGSVVAPLIASAPVILMAASFSNAVFERLPIEE 248

Query: 247 EEPSNGGGGGGGSLSNPFPDPSAAGLPFFNLPMNMTANQSQLPVDGWGEGNSG 268
           EE   GGGGGGG    P    + +  P    P  +T  Q QL  +  G G SG
Sbjct: 249 EEEEGGGGGGGGGGGPPQMQQAPSASP----PSGVT-GQGQLGGNVGGYGFSG 294

[Close]

BLAST of MS005700.1 vs. ExPASy TrEMBL
Match: A0A6J1D089 (AT-hook motif nuclear-localized protein 23-like OS=Momordica charantia OX=3673 GN=LOC111016091 PE=4 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 7.2e-150
Identity = 271/272 (99.63%), Postives = 271/272 (99.63%), Query Frame = 0


Query: 1   MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSGGEI 60
           MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSGGEI
Sbjct: 1   MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSGGEI 60

Query: 61  VGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICV 120
           VGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICV
Sbjct: 61  VGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICV 120

Query: 121 LSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQI 180
           LSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQI
Sbjct: 121 LSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQI 180

Query: 181 VGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEPSNGGGGGGGSLSNPFPDPSAAGL 240
           VGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEPSNGGGG GGSLSNPFPDPSAAGL
Sbjct: 181 VGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEPSNGGGGCGGSLSNPFPDPSAAGL 240

Query: 241 PFFNLPMNMTANQSQLPVDGWGEGNSGGRASY 273
           PFFNLPMNMTANQSQLPVDGWGEGNSGGRASY
Sbjct: 241 PFFNLPMNMTANQSQLPVDGWGEGNSGGRASY 272

[Close]

BLAST of MS005700.1 vs. ExPASy TrEMBL
Match: A0A6J1E9S9 (AT-hook motif nuclear-localized protein 23-like OS=Cucurbita moschata OX=3662 GN=LOC111432081 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 3.5e-120
Identity = 232/273 (84.98%), Postives = 244/273 (89.38%), Query Frame = 0


Query: 1   MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSGGEI 60
           MAGLDLGSAS+FVHQLQHR VDLHL+RPPD GDDGSDQFHG D+E      QQPNSGGEI
Sbjct: 1   MAGLDLGSASNFVHQLQHRSVDLHLQRPPD-GDDGSDQFHGLDDE------QQPNSGGEI 60

Query: 61  VGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICV 120
           V RR RGRPPGSKNK KPPVIITRESANTLRAHILEVN+GCD+FDSVATYARKRQRGIC+
Sbjct: 61  VARRSRGRPPGSKNKPKPPVIITRESANTLRAHILEVNTGCDVFDSVATYARKRQRGICI 120

Query: 121 LSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQI 180
           LSG+G VTNVTLRQPAS GAVLTL GR+EILSLSGSFLPPPAPPGATSL+IFL GGQGQI
Sbjct: 121 LSGTGVVTNVTLRQPASGGAVLTLPGRFEILSLSGSFLPPPAPPGATSLSIFLGGGQGQI 180

Query: 181 VGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEPSN-GGGGGGGSLSNPFPDPSAAG 240
           VGGNV GSLIASGPV VI SSFTNVAYERLPLDEEEPSN GGGGGGGSLSNPFPDPS  G
Sbjct: 181 VGGNVAGSLIASGPVTVIVSSFTNVAYERLPLDEEEPSNGGGGGGGGSLSNPFPDPS-VG 240

Query: 241 LPFFNLPMNMTANQSQLPVDGWGEGNSGGRASY 273
           LPF NLP+NM  NQ+QLPV+GW   NSGG ASY
Sbjct: 241 LPFLNLPLNMPGNQNQLPVEGW---NSGGGASY 262

[Close]

BLAST of MS005700.1 vs. ExPASy TrEMBL
Match: A0A6J1IZ40 (AT-hook motif nuclear-localized protein 23-like OS=Cucurbita maxima OX=3661 GN=LOC111479761 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.6e-117
Identity = 228/272 (83.82%), Postives = 240/272 (88.24%), Query Frame = 0


Query: 1   MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSGGEI 60
           MAGLDLGSAS+FVHQLQHR VDLHL+RPPD GDDG DQFHG D+E       QPNSGGEI
Sbjct: 1   MAGLDLGSASNFVHQLQHRSVDLHLQRPPD-GDDGPDQFHGLDDE------HQPNSGGEI 60

Query: 61  VGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICV 120
           V RR RGRPPGSKNK KPPVIITRESANTLRAHILEVN+GCD+FDSVATYARKRQRGIC+
Sbjct: 61  VARRSRGRPPGSKNKPKPPVIITRESANTLRAHILEVNTGCDVFDSVATYARKRQRGICI 120

Query: 121 LSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQI 180
           LSG+G VTNVTLRQPAS GAVLTL GR+EILSLSGSFLPPPAPPGATSL+IFL GGQGQI
Sbjct: 121 LSGTGVVTNVTLRQPASGGAVLTLPGRFEILSLSGSFLPPPAPPGATSLSIFLGGGQGQI 180

Query: 181 VGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEPSNGGGGGGGSLSNPFPDPSAAGL 240
           VGGNV GSLIASGPV VI SSFTNVAYERLPLDEEEPSN   GGGGSLSNPFPDPS AGL
Sbjct: 181 VGGNVAGSLIASGPVTVIVSSFTNVAYERLPLDEEEPSN---GGGGSLSNPFPDPS-AGL 240

Query: 241 PFFNLPMNMTANQSQLPVDGWGEGNSGGRASY 273
           PF NLP+NM  NQ+QLPV+GW   NSGG ASY
Sbjct: 241 PFLNLPLNMPGNQNQLPVEGW---NSGGGASY 258

[Close]

BLAST of MS005700.1 vs. ExPASy TrEMBL
Match: A0A5A7TZP0 (AT-hook motif nuclear-localized protein 23-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4752G00010 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.7e-111
Identity = 220/273 (80.59%), Postives = 232/273 (84.98%), Query Frame = 0


Query: 1   MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSGGEI 60
           MAGLDLGSASHFVHQLQHR VDLHL+ P D  DDGSD               QPNSGGEI
Sbjct: 1   MAGLDLGSASHFVHQLQHRSVDLHLQHPTD-VDDGSD--------------HQPNSGGEI 60

Query: 61  VGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICV 120
           V RR RGRPPGSKNK KPPVIITRESANTLRAHILEVN+GCD+FDSVA YARKRQRG+C+
Sbjct: 61  VARRSRGRPPGSKNKPKPPVIITRESANTLRAHILEVNTGCDVFDSVAAYARKRQRGVCI 120

Query: 121 LSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQI 180
           LSG+G VTNVTLRQP+S    +TL GRYEILSL+GSFLPPPAPPGATSLTIFLAGGQGQI
Sbjct: 121 LSGTGTVTNVTLRQPSSTS--ITLPGRYEILSLTGSFLPPPAPPGATSLTIFLAGGQGQI 180

Query: 181 VGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEE-PSNGGGGGGGSLSNPFPDPSAAG 240
           +GGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEE PSN  GGGGGSLSNPFPDPS  G
Sbjct: 181 IGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEQPSN--GGGGGSLSNPFPDPS-VG 240

Query: 241 LPFFNLPMNMTANQSQLPVDGWGEGNSGGRASY 273
           LP FN+P NM  NQ+QL VDGWG GNSGGRASY
Sbjct: 241 LPLFNMPSNMAGNQNQLAVDGWGGGNSGGRASY 253

[Close]

BLAST of MS005700.1 vs. ExPASy TrEMBL
Match: A0A1S3AVI9 (AT-hook motif nuclear-localized protein 23-like OS=Cucumis melo OX=3656 GN=LOC103483395 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.7e-111
Identity = 220/273 (80.59%), Postives = 232/273 (84.98%), Query Frame = 0


Query: 1   MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSGGEI 60
           MAGLDLGSASHFVHQLQHR VDLHL+ P D  DDGSD               QPNSGGEI
Sbjct: 1   MAGLDLGSASHFVHQLQHRSVDLHLQHPTD-VDDGSD--------------HQPNSGGEI 60

Query: 61  VGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICV 120
           V RR RGRPPGSKNK KPPVIITRESANTLRAHILEVN+GCD+FDSVA YARKRQRG+C+
Sbjct: 61  VARRSRGRPPGSKNKPKPPVIITRESANTLRAHILEVNTGCDVFDSVAAYARKRQRGVCI 120

Query: 121 LSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQI 180
           LSG+G VTNVTLRQP+S    +TL GRYEILSL+GSFLPPPAPPGATSLTIFLAGGQGQI
Sbjct: 121 LSGTGTVTNVTLRQPSSTS--ITLPGRYEILSLTGSFLPPPAPPGATSLTIFLAGGQGQI 180

Query: 181 VGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEE-PSNGGGGGGGSLSNPFPDPSAAG 240
           +GGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEE PSN  GGGGGSLSNPFPDPS  G
Sbjct: 181 IGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEQPSN--GGGGGSLSNPFPDPS-VG 240

Query: 241 LPFFNLPMNMTANQSQLPVDGWGEGNSGGRASY 273
           LP FN+P NM  NQ+QL VDGWG GNSGGRASY
Sbjct: 241 LPLFNMPSNMAGNQNQLAVDGWGGGNSGGRASY 253

[Close]

BLAST of MS005700.1 vs. TAIR 10
Match: AT4G17800.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 336.7 bits (862), Expect = 1.8e-92
Identity = 188/295 (63.73%), Postives = 217/295 (73.56%), Query Frame = 0


Query: 1   MAGLDLGSASHFVHQLQHRPVDLHLRRPPDGGD--DGSDQFHGGDNEEHMSNSQQ----- 60
           MAGLDLG+A  +V+   HRP DLHL       D   G+   H   ++E  +N+ Q     
Sbjct: 1   MAGLDLGTAFRYVNHQLHRP-DLHLHHNSSSDDVTPGAGMGHFTVDDEDNNNNHQGLDLA 60

Query: 61  -------------PNSGGEIVGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSG 120
                           GG++VGRRPRGRPPGSKNK KPPVIITRESANTLRAHILEV +G
Sbjct: 61  SGGGSGSSGGGGGHGGGGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVTNG 120

Query: 121 CDIFDSVATYARKRQRGICVLSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPP 180
           CD+FD VATYAR+RQRGICVLSGSG VTNV++RQP++AGAV+TL G +EILSLSGSFLPP
Sbjct: 121 CDVFDCVATYARRRQRGICVLSGSGTVTNVSIRQPSAAGAVVTLQGTFEILSLSGSFLPP 180

Query: 181 PAPPGATSLTIFLAGGQGQIVGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEPSNG 240
           PAPPGATSLTIFLAGGQGQ+VGG+VVG L A+GPVIVIA+SFTNVAYERLPL+E+E    
Sbjct: 181 PAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDEQQQQ 240

Query: 241 GGGGGGSLSNPFPDPSA---AGLPFFNLPMNMTANQSQLPVDGWGEGNSGGRASY 273
            GGG     N FP+ +A    GLPFFNLPMNM  N  QLPV+GW  GNSGGR  +
Sbjct: 241 LGGGSNGGGNLFPEVAAGGGGGLPFFNLPMNMQPN-VQLPVEGW-PGNSGGRGPF 292

[Close]

BLAST of MS005700.1 vs. TAIR 10
Match: AT2G35270.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 303.9 bits (777), Expect = 1.3e-82
Identity = 172/292 (58.90%), Postives = 209/292 (71.58%), Query Frame = 0


Query: 1   MAGLDLGSASHFVHQLQ-----HRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMS---NSQ 60
           MAGLDLG+ S +VH +          D H     DGG  G+   H  ++  H      + 
Sbjct: 1   MAGLDLGTTSRYVHNVDGGGGGQFTTDNH--HEDDGGAGGNHHHHHHNHNHHQGLDLIAS 60

Query: 61  QPNSG---------GEIVGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDI 120
             NSG         G++V RRPRGRP GSKNK KPPVI+TRESANTLRAHILEV SGCD+
Sbjct: 61  NDNSGLGGGGGGGSGDLVMRRPRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDV 120

Query: 121 FDSVATYARKRQRGICVLSGSGAVTNVTLRQPASAGAVLTLHGRYEILSLSGSFLPPPAP 180
           F+ ++TYAR+RQRGICVLSG+G VTNV++RQP +AGAV+TL G +EILSLSGSFLPPPAP
Sbjct: 121 FECISTYARRRQRGICVLSGTGTVTNVSIRQPTAAGAVVTLRGTFEILSLSGSFLPPPAP 180

Query: 181 PGATSLTIFLAGGQGQIVGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEP--SNGG 240
           PGATSLTIFLAG QGQ+VGGNVVG L+A+GPV+V+A+SFTNVAYERLPLDE E    +GG
Sbjct: 181 PGATSLTIFLAGAQGQVVGGNVVGELMAAGPVMVMAASFTNVAYERLPLDEHEEHLQSGG 240

Query: 241 GGGGGSLSNPFPDPSAAGLPFFNLPMNMTANQSQLPVDGWGEGNSG-GRASY 273
           GGGGG++ +        GLPFFNLPM+M     Q+ V+ W   ++G GRA +
Sbjct: 241 GGGGGNMYSE-ATGGGGGLPFFNLPMSM----PQIGVESWQGNHAGAGRAPF 285

[Close]

BLAST of MS005700.1 vs. TAIR 10
Match: AT4G12050.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 245.0 bits (624), Expect = 7.1e-65
Identity = 126/217 (58.06%), Postives = 166/217 (76.50%), Query Frame = 0


Query: 18  HRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQQPNSG----GEIVGRRPRGRPPGSK 77
           +R + +      D  D+ ++   G + +E   +  +  SG    GE + RRPRGRP GSK
Sbjct: 69  NRSIKMDREETSDNMDNIANTNSGSEGKEMSLHGGEGGSGGGGSGEQMTRRPRGRPAGSK 128

Query: 78  NKQKPPVIITRESANTLRAHILEVNSGCDIFDSVATYARKRQRGICVLSGSGAVTNVTLR 137
           NK K P+IITR+SAN LR H++E+  GCDI D +AT+AR+RQRG+CV+SG+G+VTNVT+R
Sbjct: 129 NKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVMSGTGSVTNVTIR 188

Query: 138 QPAS-AGAVLTLHGRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQIVGGNVVGSLIAS 197
           QP S  G+V++LHGR+EILSLSGSFLPPPAPP AT L+++LAGGQGQ+VGG+VVG L+ S
Sbjct: 189 QPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQGQVVGGSVVGPLLCS 248

Query: 198 GPVIVIASSFTNVAYERLPLDEEE---PSNGGGGGGG 227
           GPV+V+A+SF+N AYERLPL+E+E   P  GGGGGGG
Sbjct: 249 GPVVVMAASFSNAAYERLPLEEDEMQTPVQGGGGGGG 285

[Close]

BLAST of MS005700.1 vs. TAIR 10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 244.2 bits (622), Expect = 1.2e-64
Identity = 126/208 (60.58%), Postives = 161/208 (77.40%), Query Frame = 0


Query: 30  DGGDDGSD-QFHGGDNEEHMSNSQQPNSGGEIVGRRPRGRPPGSKNKQKPPVIITRESAN 89
           + G +G D   HGG  E         + G   + RRPRGRP GSKNK KPP+IITR+SAN
Sbjct: 76  NSGSEGKDIDIHGGSGE-----GGGGSGGDHQMTRRPRGRPAGSKNKPKPPIIITRDSAN 135

Query: 90  TLRAHILEVNSGCDIFDSVATYARKRQRGICVLSGSGAVTNVTLRQPA---SAGAVLTLH 149
            LR H++E+  GCD+ +SVAT+AR+RQRG+CV+SG+G VTNVT+RQP    S G+V++LH
Sbjct: 136 ALRTHVMEIGDGCDLVESVATFARRRQRGVCVMSGTGNVTNVTIRQPGSHPSPGSVVSLH 195

Query: 150 GRYEILSLSGSFLPPPAPPGATSLTIFLAGGQGQIVGGNVVGSLIASGPVIVIASSFTNV 209
           GR+EILSLSGSFLPPPAPP AT L+++LAGGQGQ+VGG+VVG L+ +GPV+V+A+SF+N 
Sbjct: 196 GRFEILSLSGSFLPPPAPPTATGLSVYLAGGQGQVVGGSVVGPLLCAGPVVVMAASFSNA 255

Query: 210 AYERLPLDEEEPSN--GGGGGGGSLSNP 232
           AYERLPL+E+E      GGGGGGSL +P
Sbjct: 256 AYERLPLEEDEMQTPVHGGGGGGSLESP 278

[Close]

BLAST of MS005700.1 vs. TAIR 10
Match: AT1G20900.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-63
Identity = 142/293 (48.46%), Postives = 181/293 (61.77%), Query Frame = 0


Query: 7   GSASHFVHQLQHRPVDLHLRRPPDGGDDGSDQFHGGDNEEHMSNSQ-------------- 66
           G AS + H L  RP   H +  P GG +  DQ H   +++H    Q              
Sbjct: 9   GGASRYFHNL-FRPEIHHQQLQPQGGINLIDQHH-HQHQQHQQQQQPSDDSRESDHSNKD 68

Query: 67  ---------QPNSGGEIVGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVNSGCDI 126
                     PN+     G+RPRGRPPGSKNK KPP+I+TR+S N LR+H+LEV+ G DI
Sbjct: 69  HHQQGRPDSDPNTSSSAPGKRPRGRPPGSKNKAKPPIIVTRDSPNALRSHVLEVSPGADI 128

Query: 127 FDSVATYARKRQRGICVLSGSGAVTNVTLRQP---------ASAGAVLTLHGRYEILSLS 186
            +SV+TYAR+R RG+ VL G+G V+NVTLRQP         +  G V+TLHGR+EILSL+
Sbjct: 129 VESVSTYARRRGRGVSVLGGNGTVSNVTLRQPVTPGNGGGVSGGGGVVTLHGRFEILSLT 188

Query: 187 GSFLPPPAPPGATSLTIFLAGGQGQIVGGNVVGSLIASGPVIVIASSFTNVAYERLPLDE 246
           G+ LPPPAPPGA  L+IFLAGGQGQ+VGG+VV  LIAS PVI++A+SF+N  +ERLP++E
Sbjct: 189 GTVLPPPAPPGAGGLSIFLAGGQGQVVGGSVVAPLIASAPVILMAASFSNAVFERLPIEE 248

Query: 247 EEPSNGGGGGGGSLSNPFPDPSAAGLPFFNLPMNMTANQSQLPVDGWGEGNSG 268
           EE   GGGGGGG    P    + +  P    P  +T  Q QL  +  G G SG
Sbjct: 249 EEEEGGGGGGGGGGGPPQMQQAPSASP----PSGVT-GQGQLGGNVGGYGFSG 294

The following BLAST results are available for this feature:

BLAST of MS005700.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147063.1	1.5e-149	99.63	AT-hook motif nuclear-localized protein 23-like [Momordica charantia]	[more]
XP_023528742.1	1.5e-120	84.93	AT-hook motif nuclear-localized protein 23-like [Cucurbita pepo subsp. pepo]	[more]
XP_022924649.1	7.2e-120	84.98	AT-hook motif nuclear-localized protein 23-like [Cucurbita moschata] >KAG6582536...	[more]
XP_022980374.1	3.4e-117	83.82	AT-hook motif nuclear-localized protein 23-like [Cucurbita maxima]	[more]
XP_038876621.1	1.0e-113	82.42	AT-hook motif nuclear-localized protein 23-like [Benincasa hispida]	[more]

BLAST of MS005700.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23620	2.5e-91	63.73	AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O82166	1.8e-81	58.90	AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9SZ70	1.0e-63	58.06	AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O49662	1.7e-63	60.58	AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9S7C9	1.9e-62	48.46	AT-hook motif nuclear-localized protein 27 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]

BLAST of MS005700.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D089	7.2e-150	99.63	AT-hook motif nuclear-localized protein 23-like OS=Momordica charantia OX=3673 G...	[more]
A0A6J1E9S9	3.5e-120	84.98	AT-hook motif nuclear-localized protein 23-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IZ40	1.6e-117	83.82	AT-hook motif nuclear-localized protein 23-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7TZP0	1.7e-111	80.59	AT-hook motif nuclear-localized protein 23-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3AVI9	1.7e-111	80.59	AT-hook motif nuclear-localized protein 23-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of MS005700.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17800.1	1.8e-92	63.73	Predicted AT-hook DNA-binding family protein	[more]
AT2G35270.1	1.3e-82	58.90	Predicted AT-hook DNA-binding family protein	[more]
AT4G12050.1	7.1e-65	58.06	Predicted AT-hook DNA-binding family protein	[more]
AT4G22810.1	1.2e-64	60.58	Predicted AT-hook DNA-binding family protein	[more]
AT1G20900.1	1.3e-63	48.46	Predicted AT-hook DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 91..204 e-value: 1.1E-28 score: 99.8
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 87..224 score: 39.132538
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 91..202 e-value: 2.43566E-31 score: 110.753
None	No IPR available	GENE3D	3.30.1330.80		coord: 90..218 e-value: 2.9E-23 score: 84.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..81
None	No IPR available	PANTHER	PTHR31100:SF68	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN	coord: 1..272
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 87..215
IPR014476	AT-hook motif nuclear-localized protein 15-29	PANTHER	PTHR31100	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	coord: 1..272

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS005700	MS005700	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS005700.1-cds	MS005700.1-cds-scaffold254:914691..915066	CDS
MS005700.1-cds	MS005700.1-cds-scaffold254:915786..916225	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS005700.1	MS005700.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding