MS005306.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS005306.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ribose-5-phosphate isomerase
Location	scaffold83: 762270 .. 763133 (+)
Sequence length	864
RNA-Seq Expression	MS005306.1
Synteny	MS005306.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCCTCTCTCTCATCTCTCCACCTTCTCTCTCTTCCTCCCGCCATGTTTCCTCCATAGCCAATCTCCTTCTCCGCTCCCCAAAACCCCTAAATCTCTCCGCCCACAACCCCCACCATTGCCGACCTCTCTCCGTTCACGCCCGCTCCGTCTCCACTCTCACTCAGGACGACCTCAAGAAGCTCGCCGCCGACAAGGCCGTCGAGTATGTCAAGAGCGGCATGGTCCTCGGCCTCGGCACCGGCTCCACCGCCGCCTTCGTGGTCGCCAAGATTGGGGAACTTCTCAAGACCAACGAATTGAGCGACATTGTTGGAATCCCTACCTCGAAGCGGACGGAGGAGCAAGCTAGGGCGTTAGGAATCCCTCTTTCCGTACTGGACGACCATCCGCATCTCGATCTGGCCATCGATGGCGCAGATGAGGTCGATCCAGATCTGAATCTCGTCAAAGGCCGCGGCGGAGCCTTGCTTCGAGAGAAAATGGTGGAGGCCGCTTCCGATAAGTTCGTCGTCGTCGTCGACGACACTAAATTGGTTAACGGCCTCGGCGGGAGCGGCCTCGCCATGCCGGTGGAGGTCGTGCAGTTCTGTTGGAAATACAACTTGGTGAGGCTTCAAGATCTGTTCAAGGACGAAGGTTGCGAGGCCAAGCTTCGATTGGACGCCGATGGAAAGCCGTACGTTACTGATAATTCGAATTACATTGTGGATTTGTATTTCCAGTCTCCGATCAAGGACGGATTAGCCGCCGGAAAAGAGATCTCGGCGTTCGAAGGAGTGGTGGAGCACGGATTGTTCTTGGACATGGCCACCGCCGTGATCATCGCCGGAAAAGATGGAATCGACATCAAGACCAAA

mRNA sequence

ATGGCTTCCCTCTCTCTCATCTCTCCACCTTCTCTCTCTTCCTCCCGCCATGTTTCCTCCATAGCCAATCTCCTTCTCCGCTCCCCAAAACCCCTAAATCTCTCCGCCCACAACCCCCACCATTGCCGACCTCTCTCCGTTCACGCCCGCTCCGTCTCCACTCTCACTCAGGACGACCTCAAGAAGCTCGCCGCCGACAAGGCCGTCGAGTATGTCAAGAGCGGCATGGTCCTCGGCCTCGGCACCGGCTCCACCGCCGCCTTCGTGGTCGCCAAGATTGGGGAACTTCTCAAGACCAACGAATTGAGCGACATTGTTGGAATCCCTACCTCGAAGCGGACGGAGGAGCAAGCTAGGGCGTTAGGAATCCCTCTTTCCGTACTGGACGACCATCCGCATCTCGATCTGGCCATCGATGGCGCAGATGAGGTCGATCCAGATCTGAATCTCGTCAAAGGCCGCGGCGGAGCCTTGCTTCGAGAGAAAATGGTGGAGGCCGCTTCCGATAAGTTCGTCGTCGTCGTCGACGACACTAAATTGGTTAACGGCCTCGGCGGGAGCGGCCTCGCCATGCCGGTGGAGGTCGTGCAGTTCTGTTGGAAATACAACTTGGTGAGGCTTCAAGATCTGTTCAAGGACGAAGGTTGCGAGGCCAAGCTTCGATTGGACGCCGATGGAAAGCCGTACGTTACTGATAATTCGAATTACATTGTGGATTTGTATTTCCAGTCTCCGATCAAGGACGGATTAGCCGCCGGAAAAGAGATCTCGGCGTTCGAAGGAGTGGTGGAGCACGGATTGTTCTTGGACATGGCCACCGCCGTGATCATCGCCGGAAAAGATGGAATCGACATCAAGACCAAA

Coding sequence (CDS)

ATGGCTTCCCTCTCTCTCATCTCTCCACCTTCTCTCTCTTCCTCCCGCCATGTTTCCTCCATAGCCAATCTCCTTCTCCGCTCCCCAAAACCCCTAAATCTCTCCGCCCACAACCCCCACCATTGCCGACCTCTCTCCGTTCACGCCCGCTCCGTCTCCACTCTCACTCAGGACGACCTCAAGAAGCTCGCCGCCGACAAGGCCGTCGAGTATGTCAAGAGCGGCATGGTCCTCGGCCTCGGCACCGGCTCCACCGCCGCCTTCGTGGTCGCCAAGATTGGGGAACTTCTCAAGACCAACGAATTGAGCGACATTGTTGGAATCCCTACCTCGAAGCGGACGGAGGAGCAAGCTAGGGCGTTAGGAATCCCTCTTTCCGTACTGGACGACCATCCGCATCTCGATCTGGCCATCGATGGCGCAGATGAGGTCGATCCAGATCTGAATCTCGTCAAAGGCCGCGGCGGAGCCTTGCTTCGAGAGAAAATGGTGGAGGCCGCTTCCGATAAGTTCGTCGTCGTCGTCGACGACACTAAATTGGTTAACGGCCTCGGCGGGAGCGGCCTCGCCATGCCGGTGGAGGTCGTGCAGTTCTGTTGGAAATACAACTTGGTGAGGCTTCAAGATCTGTTCAAGGACGAAGGTTGCGAGGCCAAGCTTCGATTGGACGCCGATGGAAAGCCGTACGTTACTGATAATTCGAATTACATTGTGGATTTGTATTTCCAGTCTCCGATCAAGGACGGATTAGCCGCCGGAAAAGAGATCTCGGCGTTCGAAGGAGTGGTGGAGCACGGATTGTTCTTGGACATGGCCACCGCCGTGATCATCGCCGGAAAAGATGGAATCGACATCAAGACCAAA

Protein sequence

MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNPHHCRPLSVHARSVSTLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVDLYFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK

Homology

[Close]

BLAST of MS005306.1 vs. NCBI nr
Match: XP_022143009.1 (probable ribose-5-phosphate isomerase 3, chloroplastic [Momordica charantia])

HSP 1 Score: 561.6 bits (1446), Expect = 3.9e-156
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNPHHCRPLSVHARSVSTLTQDDL 60
           MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNPHHCRPLSVHARSVSTLTQDDL
Sbjct: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNPHHCRPLSVHARSVSTLTQDDL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARA 120
           KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARA
Sbjct: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARA 120

Query: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180
           LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL
Sbjct: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180

Query: 181 VNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVDL 240
           VNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVDL
Sbjct: 181 VNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVDL 240

Query: 241 YFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK
Sbjct: 241 YFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 288

[Close]

BLAST of MS005306.1 vs. NCBI nr
Match: XP_022937684.1 (probable ribose-5-phosphate isomerase 3, chloroplastic [Cucurbita moschata] >XP_023521130.1 probable ribose-5-phosphate isomerase 3, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023521131.1 probable ribose-5-phosphate isomerase 3, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo] >XP_023537937.1 probable ribose-5-phosphate isomerase 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 542.0 bits (1395), Expect = 3.2e-150
Identity = 279/288 (96.88%), Postives = 284/288 (98.61%), Query Frame = 0


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNPHHCRPLSVHARSVSTLTQDDL 60
           MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHN H CRPLSV ARSVSTLTQDDL
Sbjct: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNHHRCRPLSVQARSVSTLTQDDL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARA 120
           KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLK+N+LSDIVGIPTSKRTEEQARA
Sbjct: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEEQARA 120

Query: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180
           LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL
Sbjct: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180

Query: 181 VNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVDL 240
           V+GLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDE CEAKLRLDADGKPYVTDNSNYIVDL
Sbjct: 181 VDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSNYIVDL 240

Query: 241 YFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YF++PIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK
Sbjct: 241 YFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 288

[Close]

BLAST of MS005306.1 vs. NCBI nr
Match: KAG6586302.1 (putative ribose-5-phosphate isomerase 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 539.7 bits (1389), Expect = 1.6e-149
Identity = 278/288 (96.53%), Postives = 284/288 (98.61%), Query Frame = 0


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNPHHCRPLSVHARSVSTLTQDDL 60
           MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHN + CRPLSV ARSVSTLTQDDL
Sbjct: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNHYRCRPLSVQARSVSTLTQDDL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARA 120
           KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLK+N+LSDIVGIPTSKRTEEQARA
Sbjct: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEEQARA 120

Query: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180
           LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL
Sbjct: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180

Query: 181 VNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVDL 240
           V+GLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDE CEAKLRLDADGKPYVTDNSNYIVDL
Sbjct: 181 VDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSNYIVDL 240

Query: 241 YFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YF++PIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK
Sbjct: 241 YFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 288

[Close]

BLAST of MS005306.1 vs. NCBI nr
Match: KAG7021151.1 (putative ribose-5-phosphate isomerase 3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 538.5 bits (1386), Expect = 3.5e-149
Identity = 277/288 (96.18%), Postives = 284/288 (98.61%), Query Frame = 0


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNPHHCRPLSVHARSVSTLTQDDL 60
           MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSA+N H CRPLSV ARSVSTLTQDDL
Sbjct: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSANNQHRCRPLSVQARSVSTLTQDDL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARA 120
           KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLK+N+LSDIVGIPTSKRTEEQA+A
Sbjct: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEEQAKA 120

Query: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180
           LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL
Sbjct: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180

Query: 181 VNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVDL 240
           V+GLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDE CEAKLRLDADGKPYVTDNSNYIVDL
Sbjct: 181 VDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSNYIVDL 240

Query: 241 YFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YF++PIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK
Sbjct: 241 YFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 288

[Close]

BLAST of MS005306.1 vs. NCBI nr
Match: XP_023521728.1 (probable ribose-5-phosphate isomerase 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 534.3 bits (1375), Expect = 6.7e-148
Identity = 274/288 (95.14%), Postives = 283/288 (98.26%), Query Frame = 0


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNPHHCRPLSVHARSVSTLTQDDL 60
           MASLS ISPPSLSSSRHVSSIANLLLRSPKPLNLSAHN H CRPLSV ARSVSTLTQDDL
Sbjct: 1   MASLSSISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNHHRCRPLSVQARSVSTLTQDDL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARA 120
           KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLK+N+L DIVGIPTSKRTEEQAR+
Sbjct: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQARS 120

Query: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180
           LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVD+TKL
Sbjct: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDETKL 180

Query: 181 VNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVDL 240
           V+GLGGSGLAMPVEVVQFCWK+NLVRLQDLFKDEGCEAKLRL+ADGKPYVTDNSNYIVDL
Sbjct: 181 VDGLGGSGLAMPVEVVQFCWKHNLVRLQDLFKDEGCEAKLRLEADGKPYVTDNSNYIVDL 240

Query: 241 YFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YF++PIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK
Sbjct: 241 YFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 288

[Close]

BLAST of MS005306.1 vs. ExPASy Swiss-Prot
Match: Q9S726 (Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPI3 PE=1 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 3.8e-106
Identity = 201/289 (69.55%), Postives = 236/289 (81.66%), Query Frame = 0


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPK-PLNLSAHNPHHCRPLSVHARSVSTLTQDD 60
           MASLS +S             ++L LR+P   L  +  +P      SV A+SV+ L+QDD
Sbjct: 1   MASLSFVSS------------SHLTLRTPSIALRSTGSSPRTSVSFSVKAQSVA-LSQDD 60

Query: 61  LKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQAR 120
           LKKLAA+KAVE +K GMVLGLGTGSTAAF V +IG+LL + EL DIVGIPTSKRTEEQAR
Sbjct: 61  LKKLAAEKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTEEQAR 120

Query: 121 ALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTK 180
           +LGIPL  LD HP +DLAIDGADEVDP+L+LVKGRGGALLREKMVEA +DKF+VV DDTK
Sbjct: 121 SLGIPLVGLDTHPRIDLAIDGADEVDPNLDLVKGRGGALLREKMVEAVADKFIVVADDTK 180

Query: 181 LVNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVD 240
           LV GLGGSGLAMPVEVVQFCW +NL+RLQDLFK+ GCE+KLR+D DGKPYVTDNSNYI+D
Sbjct: 181 LVTGLGGSGLAMPVEVVQFCWNFNLIRLQDLFKEFGCESKLRVDGDGKPYVTDNSNYIID 240

Query: 241 LYFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           LYF++P+KDG AA KEI  F+GVVEHGLFL MAT+VIIAGK+G+++ TK
Sbjct: 241 LYFKTPLKDGFAAAKEIGKFQGVVEHGLFLGMATSVIIAGKNGVEVMTK 276

[Close]

BLAST of MS005306.1 vs. ExPASy Swiss-Prot
Match: Q9ZU38 (Probable ribose-5-phosphate isomerase 2 OS=Arabidopsis thaliana OX=3702 GN=RPI2 PE=1 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.8e-79
Identity = 149/234 (63.68%), Postives = 184/234 (78.63%), Query Frame = 0


Query: 55  LTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRT 114
           LTQD+LK++AA KAVE+V+SGMVLGLGTGSTA   V +IGELL+  +L +IVGIPTSK+T
Sbjct: 31  LTQDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKT 90

Query: 115 EEQARALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVV 174
           +EQA +LGIPLS LD HP +DL+IDGADEVDP LNLVKGRGG+LLREKM+E AS KFVV+
Sbjct: 91  QEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFVVI 150

Query: 175 VDDTKLVNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNS 234
           VDD+K+V  +GGS LA+PVE+V FCWK+   +L+ L +  GCEA LRL   GK +VTDN 
Sbjct: 151 VDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLRLGEKGKAFVTDNG 210

Query: 235 NYIVDLYFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           NYIVD++ +  + D  A    I    GVVEHG+FLDMA+ VIIAG+ G+ IK K
Sbjct: 211 NYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLDMASTVIIAGELGVKIKNK 264

[Close]

BLAST of MS005306.1 vs. ExPASy Swiss-Prot
Match: Q9C998 (Probable ribose-5-phosphate isomerase 1 OS=Arabidopsis thaliana OX=3702 GN=RPI1 PE=1 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.3e-77
Identity = 149/245 (60.82%), Postives = 186/245 (75.92%), Query Frame = 0


Query: 49  ARSVSTLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGI 108
           A  +S LTQ++LKK+AA KAVE+V+SGMV+GLGTGSTA   VA+I ELL+  +L DI+GI
Sbjct: 21  APPLSNLTQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIGI 80

Query: 109 PTSKRTEEQARALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAAS 168
           PTS  T EQA +LGIPLS LD HP +DL+IDGADEVDP LNLVKGRGG+LLREKM+E AS
Sbjct: 81  PTSTTTHEQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKMIEGAS 140

Query: 169 DKFVVVVDDTKLVNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRL-----D 228
            KFVV+VD++KLV  +GGSGLA+PVEVV FC  +   +L++LF+D GC AKLR+      
Sbjct: 141 KKFVVIVDESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAKLRMKIGSNG 200

Query: 229 ADGKPYVTDNSNYIVDLYFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGI 288
            +  P VTDN NY+VDLY +  I D   A + I  F GVVEHG+FL MAT +I+AGK G+
Sbjct: 201 EEAAPAVTDNRNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATTLIVAGKFGV 260

[Close]

BLAST of MS005306.1 vs. ExPASy Swiss-Prot
Match: Q2JSC9 (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=rpiA PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.1e-55
Identity = 116/228 (50.88%), Postives = 160/228 (70.18%), Query Frame = 0


Query: 58  DDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQ 117
           D+LK+ AA  A + V+SGMV+GLGTGSTAAF V  + + ++   L   +G+PTS+RT EQ
Sbjct: 5   DELKQAAAQAAAQKVQSGMVVGLGTGSTAAFAVGALAQRMQKEGL-QFIGVPTSERTAEQ 64

Query: 118 ARALGIPLSVLDDHPHLDLAIDGADEVD-PDLNLVKGRGGALLREKMVEAASDKFVVVVD 177
           AR+LGIPL+ L++ P LDLAIDGADE++   LNL+KG GGALLREK+VEA++ + +++ D
Sbjct: 65  ARSLGIPLATLEEQPRLDLAIDGADEIEVGSLNLIKGAGGALLREKLVEASAAELIIIAD 124

Query: 178 DTKLVNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNY 237
            +K V  L G+   +PVEVV+F WK  L R++ L    GC+A LR  A+G PY+TD  +Y
Sbjct: 125 ASKKVAHL-GTRFPVPVEVVRFGWKTTLARVEAL----GCQAVLRRTAEGDPYLTDEQHY 184

Query: 238 IVDLYFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGID 285
           I+D  F  PI +     +++    GVVEHGLF+ MAT  IIAG +GI+
Sbjct: 185 ILDCQF-GPIANPAKLAEQLKGTVGVVEHGLFIGMATEAIIAGPEGIE 225

[Close]

BLAST of MS005306.1 vs. ExPASy Swiss-Prot
Match: B8FL28 (Ribose-5-phosphate isomerase A OS=Desulfatibacillum aliphaticivorans OX=218208 GN=rpiA PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.5e-54
Identity = 118/228 (51.75%), Postives = 155/228 (67.98%), Query Frame = 0


Query: 56  TQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTE 115
           +QD LKK AA+KAVEY++SGMV+GLG+GSTA F +  I  L+K  +L DIVGIP+S  TE
Sbjct: 3   SQDALKKQAAEKAVEYLESGMVVGLGSGSTATFAIHAIARLMKEGKLKDIVGIPSSTPTE 62

Query: 116 EQARALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVV 175
           E AR+LGIPL   ++H  +D+ IDGADEVDPDLNL+KG GGALLREK+V  A+ K +++V
Sbjct: 63  EVARSLGIPLVGFEEHAVIDVTIDGADEVDPDLNLIKGGGGALLREKVVAQATKKNIIIV 122

Query: 176 DDTKLVNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSN 235
           D++K+ + L G+  A+PVEVV F        L+ L    G +  +R +  GK + TDN N
Sbjct: 123 DESKISDKL-GTIFALPVEVVPFATASETRFLESL----GAKVTVRENQLGKAFKTDNHN 182

Query: 236 YIVDLYFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGI 284
            I+D  F  P+ D +  G  +S   GVVEHGLFL     VI+AG DGI
Sbjct: 183 RILDADF-GPMDDAVKIGMALSQRAGVVEHGLFLGTTALVIVAGADGI 224

[Close]

BLAST of MS005306.1 vs. ExPASy TrEMBL
Match: A0A6J1CN30 (Ribose-5-phosphate isomerase OS=Momordica charantia OX=3673 GN=LOC111012997 PE=3 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 1.9e-156
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNPHHCRPLSVHARSVSTLTQDDL 60
           MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNPHHCRPLSVHARSVSTLTQDDL
Sbjct: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNPHHCRPLSVHARSVSTLTQDDL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARA 120
           KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARA
Sbjct: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARA 120

Query: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180
           LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL
Sbjct: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180

Query: 181 VNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVDL 240
           VNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVDL
Sbjct: 181 VNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVDL 240

Query: 241 YFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK
Sbjct: 241 YFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 288

[Close]

BLAST of MS005306.1 vs. ExPASy TrEMBL
Match: A0A6J1FBW8 (Ribose-5-phosphate isomerase OS=Cucurbita moschata OX=3662 GN=LOC111444014 PE=3 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.5e-150
Identity = 279/288 (96.88%), Postives = 284/288 (98.61%), Query Frame = 0


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNPHHCRPLSVHARSVSTLTQDDL 60
           MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHN H CRPLSV ARSVSTLTQDDL
Sbjct: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNHHRCRPLSVQARSVSTLTQDDL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARA 120
           KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLK+N+LSDIVGIPTSKRTEEQARA
Sbjct: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEEQARA 120

Query: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180
           LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL
Sbjct: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180

Query: 181 VNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVDL 240
           V+GLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDE CEAKLRLDADGKPYVTDNSNYIVDL
Sbjct: 181 VDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSNYIVDL 240

Query: 241 YFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YF++PIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK
Sbjct: 241 YFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 288

[Close]

BLAST of MS005306.1 vs. ExPASy TrEMBL
Match: A0A6J1HPY9 (Ribose-5-phosphate isomerase OS=Cucurbita maxima OX=3661 GN=LOC111465624 PE=3 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.2e-148
Identity = 274/288 (95.14%), Postives = 283/288 (98.26%), Query Frame = 0


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNPHHCRPLSVHARSVSTLTQDDL 60
           MASLSLISPPSLSSS HVSSIANL+LRSPKPLNLSA+N H CRPLS+ ARSVSTLTQDDL
Sbjct: 1   MASLSLISPPSLSSSCHVSSIANLILRSPKPLNLSANNHHRCRPLSIQARSVSTLTQDDL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARA 120
           KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLK+N+LSDIVGIPTSKRTEEQARA
Sbjct: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEEQARA 120

Query: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180
           LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVE+ASDKFVVVVDDTKL
Sbjct: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVESASDKFVVVVDDTKL 180

Query: 181 VNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVDL 240
           V+GLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDE CEAKLRLDADGKPYVTDNSNYIVDL
Sbjct: 181 VDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSNYIVDL 240

Query: 241 YFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YF++PIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK
Sbjct: 241 YFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 288

[Close]

BLAST of MS005306.1 vs. ExPASy TrEMBL
Match: A0A6J1G4S7 (Ribose-5-phosphate isomerase OS=Cucurbita moschata OX=3662 GN=LOC111450781 PE=3 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 6.3e-144
Identity = 269/288 (93.40%), Postives = 279/288 (96.88%), Query Frame = 0


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNPHHCRPLSVHARSVSTLTQDDL 60
           MASLS ISPPSLSSSRHVSSIANLLLRSPK +NLSA    HCRPLSV ARSVSTLTQDDL
Sbjct: 1   MASLSFISPPSLSSSRHVSSIANLLLRSPKSINLSA----HCRPLSVQARSVSTLTQDDL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARA 120
           KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLK+N+L DIVGIPTSKRTEEQAR+
Sbjct: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQARS 120

Query: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180
           LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVD+TKL
Sbjct: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDETKL 180

Query: 181 VNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVDL 240
           V+GLGGSGLAMPVEVVQFCWK+NLVRLQDLFKDEGCEAKLRL+ADGKPYVTDNSNYIVDL
Sbjct: 181 VDGLGGSGLAMPVEVVQFCWKHNLVRLQDLFKDEGCEAKLRLEADGKPYVTDNSNYIVDL 240

Query: 241 YFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YF++PIKDGLAAGKEISAFEGVVEHGLFLDMAT VIIAGKDGIDIKTK
Sbjct: 241 YFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATVVIIAGKDGIDIKTK 284

[Close]

BLAST of MS005306.1 vs. ExPASy TrEMBL
Match: A0A5D3D4D6 (Ribose-5-phosphate isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001330 PE=3 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 5.3e-143
Identity = 269/288 (93.40%), Postives = 278/288 (96.53%), Query Frame = 0


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNPHHCRPLSVHARSVSTLTQDDL 60
           MASLS ISPPSLSSSRHVSSIANLLLRS KPLNLS     HCRPLSVHAR VSTLTQDDL
Sbjct: 1   MASLSFISPPSLSSSRHVSSIANLLLRSSKPLNLST----HCRPLSVHAR-VSTLTQDDL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARA 120
           KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTN+L+DIVGIPTSKRTEEQAR+
Sbjct: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARS 120

Query: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180
           LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL
Sbjct: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180

Query: 181 VNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVDL 240
           V+GLGGSGLAMPVEVVQFCWKYNLVRLQ+LFK+EGCEAKLRL+ DGKPYVTDNSNYIVDL
Sbjct: 181 VDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLEGDGKPYVTDNSNYIVDL 240

Query: 241 YFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YF++PIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIK K
Sbjct: 241 YFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 283

[Close]

BLAST of MS005306.1 vs. TAIR 10
Match: AT3G04790.1 (Ribose 5-phosphate isomerase, type A protein )

HSP 1 Score: 386.0 bits (990), Expect = 2.7e-107
Identity = 201/289 (69.55%), Postives = 236/289 (81.66%), Query Frame = 0


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPK-PLNLSAHNPHHCRPLSVHARSVSTLTQDD 60
           MASLS +S             ++L LR+P   L  +  +P      SV A+SV+ L+QDD
Sbjct: 1   MASLSFVSS------------SHLTLRTPSIALRSTGSSPRTSVSFSVKAQSVA-LSQDD 60

Query: 61  LKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQAR 120
           LKKLAA+KAVE +K GMVLGLGTGSTAAF V +IG+LL + EL DIVGIPTSKRTEEQAR
Sbjct: 61  LKKLAAEKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTEEQAR 120

Query: 121 ALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTK 180
           +LGIPL  LD HP +DLAIDGADEVDP+L+LVKGRGGALLREKMVEA +DKF+VV DDTK
Sbjct: 121 SLGIPLVGLDTHPRIDLAIDGADEVDPNLDLVKGRGGALLREKMVEAVADKFIVVADDTK 180

Query: 181 LVNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVD 240
           LV GLGGSGLAMPVEVVQFCW +NL+RLQDLFK+ GCE+KLR+D DGKPYVTDNSNYI+D
Sbjct: 181 LVTGLGGSGLAMPVEVVQFCWNFNLIRLQDLFKEFGCESKLRVDGDGKPYVTDNSNYIID 240

Query: 241 LYFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           LYF++P+KDG AA KEI  F+GVVEHGLFL MAT+VIIAGK+G+++ TK
Sbjct: 241 LYFKTPLKDGFAAAKEIGKFQGVVEHGLFLGMATSVIIAGKNGVEVMTK 276

[Close]

BLAST of MS005306.1 vs. TAIR 10
Match: AT2G01290.1 (ribose-5-phosphate isomerase 2 )

HSP 1 Score: 297.4 bits (760), Expect = 1.3e-80
Identity = 149/234 (63.68%), Postives = 184/234 (78.63%), Query Frame = 0


Query: 55  LTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRT 114
           LTQD+LK++AA KAVE+V+SGMVLGLGTGSTA   V +IGELL+  +L +IVGIPTSK+T
Sbjct: 31  LTQDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKT 90

Query: 115 EEQARALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVV 174
           +EQA +LGIPLS LD HP +DL+IDGADEVDP LNLVKGRGG+LLREKM+E AS KFVV+
Sbjct: 91  QEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFVVI 150

Query: 175 VDDTKLVNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNS 234
           VDD+K+V  +GGS LA+PVE+V FCWK+   +L+ L +  GCEA LRL   GK +VTDN 
Sbjct: 151 VDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLRLGEKGKAFVTDNG 210

Query: 235 NYIVDLYFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           NYIVD++ +  + D  A    I    GVVEHG+FLDMA+ VIIAG+ G+ IK K
Sbjct: 211 NYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLDMASTVIIAGELGVKIKNK 264

[Close]

BLAST of MS005306.1 vs. TAIR 10
Match: AT1G71100.1 (Ribose 5-phosphate isomerase, type A protein )

HSP 1 Score: 291.2 bits (744), Expect = 9.1e-79
Identity = 149/245 (60.82%), Postives = 186/245 (75.92%), Query Frame = 0


Query: 49  ARSVSTLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGI 108
           A  +S LTQ++LKK+AA KAVE+V+SGMV+GLGTGSTA   VA+I ELL+  +L DI+GI
Sbjct: 21  APPLSNLTQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIGI 80

Query: 109 PTSKRTEEQARALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAAS 168
           PTS  T EQA +LGIPLS LD HP +DL+IDGADEVDP LNLVKGRGG+LLREKM+E AS
Sbjct: 81  PTSTTTHEQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKMIEGAS 140

Query: 169 DKFVVVVDDTKLVNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRL-----D 228
            KFVV+VD++KLV  +GGSGLA+PVEVV FC  +   +L++LF+D GC AKLR+      
Sbjct: 141 KKFVVIVDESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAKLRMKIGSNG 200

Query: 229 ADGKPYVTDNSNYIVDLYFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGI 288
            +  P VTDN NY+VDLY +  I D   A + I  F GVVEHG+FL MAT +I+AGK G+
Sbjct: 201 EEAAPAVTDNRNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATTLIVAGKFGV 260

[Close]

BLAST of MS005306.1 vs. TAIR 10
Match: AT5G44520.1 (NagB/RpiA/CoA transferase-like superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 3.5e-22
Identity = 67/221 (30.32%), Postives = 112/221 (50.68%), Query Frame = 0


Query: 71  YVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARALGIPLSVLDD 130
           YVKSGM++GLG+G  + F +  +G+ L +  L ++VG+P S R+  +A   GIPL    D
Sbjct: 51  YVKSGMIIGLGSGEASDFAIRYLGQQLGSGSLHNVVGVPMSARSASEAAKYGIPLEYYRD 110

Query: 131 HPHLDLAIDGADEVDPD-LNLVKGRGGA------LLREKMVEAASDKFVVVVDDTKLVNG 190
              +D A   AD V+ + L  V GR  +      +L++K +   +D+ V ++ + +   G
Sbjct: 111 GVQIDFAFHDADAVEENTLIAVIGRRRSSQEDDYILKQKSIVKVADEAVFMIKEEQYKAG 170

Query: 191 LGGSGLAMPVEVVQFCWKYNLVRLQDLF-KDEGCEAKLRLDADGK-----PYVTDNSNYI 250
           L GS   +PV V    W      + DL+  D     +  ++ +G      P VT + + I
Sbjct: 171 LEGS---IPVLVQSLNWLAIAEEIDDLYLGDAEVWRRASVENEGPLGGDFPIVTSDGHNI 230

Query: 251 VDLYFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIA 279
           +D+ F +PI+        +   +GVV+HGL +     V+IA
Sbjct: 231 LDVIFTTPIRSLADLATSLDKIDGVVDHGLIIKTRCTVVIA 268

The following BLAST results are available for this feature:

BLAST of MS005306.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143009.1	3.9e-156	100.00	probable ribose-5-phosphate isomerase 3, chloroplastic [Momordica charantia]	[more]
XP_022937684.1	3.2e-150	96.88	probable ribose-5-phosphate isomerase 3, chloroplastic [Cucurbita moschata] >XP_...	[more]
KAG6586302.1	1.6e-149	96.53	putative ribose-5-phosphate isomerase 3, chloroplastic, partial [Cucurbita argyr...	[more]
KAG7021151.1	3.5e-149	96.18	putative ribose-5-phosphate isomerase 3, chloroplastic, partial [Cucurbita argyr...	[more]
XP_023521728.1	6.7e-148	95.14	probable ribose-5-phosphate isomerase 3, chloroplastic [Cucurbita pepo subsp. pe...	[more]

BLAST of MS005306.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S726	3.8e-106	69.55	Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9ZU38	1.8e-79	63.68	Probable ribose-5-phosphate isomerase 2 OS=Arabidopsis thaliana OX=3702 GN=RPI2 ...	[more]
Q9C998	1.3e-77	60.82	Probable ribose-5-phosphate isomerase 1 OS=Arabidopsis thaliana OX=3702 GN=RPI1 ...	[more]
Q2JSC9	3.1e-55	50.88	Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 ...	[more]
B8FL28	4.5e-54	51.75	Ribose-5-phosphate isomerase A OS=Desulfatibacillum aliphaticivorans OX=218208 G...	[more]

BLAST of MS005306.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CN30	1.9e-156	100.00	Ribose-5-phosphate isomerase OS=Momordica charantia OX=3673 GN=LOC111012997 PE=3...	[more]
A0A6J1FBW8	1.5e-150	96.88	Ribose-5-phosphate isomerase OS=Cucurbita moschata OX=3662 GN=LOC111444014 PE=3 ...	[more]
A0A6J1HPY9	4.2e-148	95.14	Ribose-5-phosphate isomerase OS=Cucurbita maxima OX=3661 GN=LOC111465624 PE=3 SV...	[more]
A0A6J1G4S7	6.3e-144	93.40	Ribose-5-phosphate isomerase OS=Cucurbita moschata OX=3662 GN=LOC111450781 PE=3 ...	[more]
A0A5D3D4D6	5.3e-143	93.40	Ribose-5-phosphate isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of MS005306.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04790.1	2.7e-107	69.55	Ribose 5-phosphate isomerase, type A protein	[more]
AT2G01290.1	1.3e-80	63.68	ribose-5-phosphate isomerase 2	[more]
AT1G71100.1	9.1e-79	60.82	Ribose 5-phosphate isomerase, type A protein	[more]
AT5G44520.1	3.5e-22	30.32	NagB/RpiA/CoA transferase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004788	Ribose 5-phosphate isomerase, type A	TIGRFAM	TIGR00021	TIGR00021	coord: 60..283 e-value: 3.7E-78 score: 259.8
IPR004788	Ribose 5-phosphate isomerase, type A	PFAM	PF06026	Rib_5-P_isom_A	coord: 106..282 e-value: 8.0E-62 score: 207.9
IPR004788	Ribose 5-phosphate isomerase, type A	CDD	cd01398	RPI_A	coord: 60..279 e-value: 2.54911E-102 score: 295.921
None	No IPR available	GENE3D	3.30.70.260		coord: 183..266 e-value: 7.2E-80 score: 269.3
None	No IPR available	GENE3D	3.40.50.1360		coord: 60..282 e-value: 7.2E-80 score: 269.3
None	No IPR available	PANTHER	PTHR43748:SF3	RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED	coord: 30..288
None	No IPR available	PANTHER	PTHR43748	RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED	coord: 30..288
None	No IPR available	SUPERFAMILY	75445	D-ribose-5-phosphate isomerase (RpiA), lid domain	coord: 189..269
IPR020672	Ribose-5-phosphate isomerase, type A, subgroup	HAMAP	MF_00170	Rib_5P_isom_A	coord: 57..286 score: 30.659296
IPR037171	NagB/RpiA transferase-like	SUPERFAMILY	100950	NagB/RpiA/CoA transferase-like	coord: 56..239

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS005306	MS005306	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS005306.1-cds	MS005306.1-cds-scaffold83:762270..763133	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS005306.1	MS005306.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009052	pentose-phosphate shunt, non-oxidative branch
molecular_function	GO:0004751	ribose-5-phosphate isomerase activity