MS003900.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS003900.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Mitochondrial ATP synthase subunit G protein
Location	scaffold127: 1411107 .. 1412811 (-)
Sequence length	366
RNA-Seq Expression	MS003900.1
Synteny	MS003900.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCCAAGTTGACTCAGTTACAGTCCAAGGCCACTCAAGCATCACAATTTGTGTTAAAGAATGGGTGTTCCTACTACAAGCAATTGTTGGAGCAAAACAAGCAATTTATTCAGGAGCCAGCTACAGTGGAGAAATGCAACGAGCTTTCTAAGCAATTATTATACACTCGCCTTGCTAGGTCATACTTTCTACACTCGCTTTATATAATATTGTTTGACTTAACGCTTCGCATCTTTTTGGAGTTAGGAAATGGTACCCATTCTTTCCCTTAATCATGTAGGACCACATTTTATTTGGTCTGTTGGTGCAGTTAGAAGGTTACCTATTTTTAATATCATCCGTGCTCAGTAATTTGTGCTCTTTAGTTTCGTTGTCTTTTAAAGTTTCCCTATTTTTCATTCAACCTTACATTTTTCTTTTCAATATATGGTAATAAATACTATTCTAATCCATATTACTGGATGAATGCAAGCAGTTTTTTTTTTTTTGGCTTTTAATCAATGTTAGATTCTGCCTCGTTGAGTCCCTTTTTATTTATTAATTAATTAATTAATATAAATGTTGTGTGGCACTATTGTGCTGCAGCACCTTCTTGAGTTTTTGGCAACTGTTTAGAGGAAGAATAAGTCAATTGATTGTAGGAAAGATTTAAGGAAAAGCTTATGTGCCAATGTGTGATGGTATTGCTGGCTCTAACAACAAAATTCTTGTCCTTTTAAGATTTTTCAATCATATATAGCATTAGCATATTGGATAATAATTTTTTTTCACATTGATGTCCAACAATTTACTTTATGTATAGAACAATATTTAGAGAGCTTATGATTCTTGAAAGACACTTTGAACTCATCAATACACAACTATAATTACATAATGGTGTTTAGGGCCTTAGGCACAAGTACTTTTTGAAATTTCAGGAATATTTACTAGTGCTTTCTGAAGAAACGCATAATAATAATTTTAAAAAATGTGCTCTTTGTTTATAATTTTGTAGTGCCTGAGAATTCACATTTATTTTTATTATGAACTTCCTTTTGTTTATTTATGATACCATATATATTATACAAAATAATCATAAAATTGGACATACACGAGCTCGACTAGAAAATCATTTTTTAACAACTGAGATACTCTGATGTATTCTTTTCCCTGTGAGCCATATAACTTTCCCCAGTGAATTGTAGTCAAATTTGTTTTATTGTTGTGGTCATGTCATGTGAGAATATCTTCTTCTGTAGTATTGTAGTAAAAAAAAACCATCATTTAAGGTAAATTTAAAGGATTTTGAGAGAATGGCCTCAAATTCCATAGTGACCACCTACCTAGAAATTAATTTACTATGTGTTTCTTTGGCAATCAAATGTAGTAGGGTATGGTTGTTGTCGAGATTAGTCAAGGTATGAGCAAGCTGGATCAGATACTCACGGATAAAAATATATATATAATGTAGGCAAATAAATATTAGAAAATTCTTTGTGTGGGATATCATTTTGACATGCTGCATCTTATCGATACAGTCTTCCAGGTCGGTATGAGTCCTTCCATAAGGAACTCGATTGCGTAAAAAATTTATGGAAGAACAGACAAGAGCTGAAGGTGGAAGATGCTGGTATTGCTGCTCTATTTGGGCTCGAATGCTTTGCATGGTTTTGTGCTGGTGAAATTGTGGGAAGGGGATTTACTTTCACAGGATACTATGTC

mRNA sequence

ATGGCATCCAAGTTGACTCAGTTACAGTCCAAGGCCACTCAAGCATCACAATTTGTGTTAAAGAATGGGTGTTCCTACTACAAGCAATTGTTGGAGCAAAACAAGCAATTTATTCAGGAGCCAGCTACAGTGGAGAAATGCAACGAGCTTTCTAAGCAATTATTATACACTCGCCTTGCTAGTCTTCCAGGTCGGTATGAGTCCTTCCATAAGGAACTCGATTGCGTAAAAAATTTATGGAAGAACAGACAAGAGCTGAAGGTGGAAGATGCTGGTATTGCTGCTCTATTTGGGCTCGAATGCTTTGCATGGTTTTGTGCTGGTGAAATTGTGGGAAGGGGATTTACTTTCACAGGATACTATGTC

Coding sequence (CDS)

ATGGCATCCAAGTTGACTCAGTTACAGTCCAAGGCCACTCAAGCATCACAATTTGTGTTAAAGAATGGGTGTTCCTACTACAAGCAATTGTTGGAGCAAAACAAGCAATTTATTCAGGAGCCAGCTACAGTGGAGAAATGCAACGAGCTTTCTAAGCAATTATTATACACTCGCCTTGCTAGTCTTCCAGGTCGGTATGAGTCCTTCCATAAGGAACTCGATTGCGTAAAAAATTTATGGAAGAACAGACAAGAGCTGAAGGTGGAAGATGCTGGTATTGCTGCTCTATTTGGGCTCGAATGCTTTGCATGGTTTTGTGCTGGTGAAATTGTGGGAAGGGGATTTACTTTCACAGGATACTATGTC

Protein sequence

MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLASLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGYYV

Homology

[Close]

BLAST of MS003900.1 vs. NCBI nr
Match: XP_022159243.1 (uncharacterized protein LOC111025660 [Momordica charantia])

HSP 1 Score: 247.7 bits (631), Expect = 5.3e-62
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60
           MASKLTQLQSKATQAS+FVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA
Sbjct: 1   MASKLTQLQSKATQASRFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

[Close]

BLAST of MS003900.1 vs. NCBI nr
Match: XP_004135693.1 (uncharacterized protein LOC101205555 [Cucumis sativus] >XP_031744268.1 uncharacterized protein LOC116404961 [Cucumis sativus] >KAE8637473.1 hypothetical protein CSA_004506 [Cucumis sativus] >KGN66209.1 hypothetical protein Csa_007132 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 2.1e-58
Identity = 115/122 (94.26%), Postives = 118/122 (96.72%), Query Frame = 0


Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60
           MASKL QLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEP TVEKCNELSKQLLYTRLA
Sbjct: 1   MASKLAQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYE+FHKELD VK LWKNRQ+LKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYEAFHKELDYVKQLWKNRQDLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

[Close]

BLAST of MS003900.1 vs. NCBI nr
Match: XP_008450823.1 (PREDICTED: uncharacterized protein LOC103492293 [Cucumis melo])

HSP 1 Score: 235.7 bits (600), Expect = 2.1e-58
Identity = 115/122 (94.26%), Postives = 118/122 (96.72%), Query Frame = 0


Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60
           MASKL QLQSKATQASQFVLKNGCSYYKQLLEQNKQ+IQEP TVEKCNELSKQLLYTRLA
Sbjct: 1   MASKLAQLQSKATQASQFVLKNGCSYYKQLLEQNKQYIQEPPTVEKCNELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYESFHKELD VK LWKNRQ+LKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYESFHKELDYVKQLWKNRQDLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

[Close]

BLAST of MS003900.1 vs. NCBI nr
Match: XP_038878413.1 (uncharacterized protein LOC120070653 [Benincasa hispida])

HSP 1 Score: 235.3 bits (599), Expect = 2.7e-58
Identity = 115/122 (94.26%), Postives = 118/122 (96.72%), Query Frame = 0


Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60
           MASKLTQLQSKATQASQFVLK+GCSYYKQLLEQNKQFIQEP TVEKCN+LSKQL YTRLA
Sbjct: 1   MASKLTQLQSKATQASQFVLKHGCSYYKQLLEQNKQFIQEPPTVEKCNQLSKQLFYTRLA 60

Query: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYESFHKELD VK LWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYESFHKELDYVKQLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

[Close]

BLAST of MS003900.1 vs. NCBI nr
Match: XP_022987908.1 (uncharacterized protein LOC111485310 [Cucurbita maxima])

HSP 1 Score: 233.0 bits (593), Expect = 1.3e-57
Identity = 114/122 (93.44%), Postives = 118/122 (96.72%), Query Frame = 0


Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60
           MASKLTQLQSKATQASQFVLK+GCSYYKQLLEQNKQFIQEP TVEKCN LSKQLLYTRLA
Sbjct: 1   MASKLTQLQSKATQASQFVLKHGCSYYKQLLEQNKQFIQEPPTVEKCNLLSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYESFHKELD VK LWKNRQE++VEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYESFHKELDYVKQLWKNRQEMRVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

[Close]

BLAST of MS003900.1 vs. ExPASy TrEMBL
Match: A0A6J1DYA0 (uncharacterized protein LOC111025660 OS=Momordica charantia OX=3673 GN=LOC111025660 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.6e-62
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60
           MASKLTQLQSKATQAS+FVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA
Sbjct: 1   MASKLTQLQSKATQASRFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

[Close]

BLAST of MS003900.1 vs. ExPASy TrEMBL
Match: A0A0A0LYS9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580240 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.0e-58
Identity = 115/122 (94.26%), Postives = 118/122 (96.72%), Query Frame = 0


Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60
           MASKL QLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEP TVEKCNELSKQLLYTRLA
Sbjct: 1   MASKLAQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYE+FHKELD VK LWKNRQ+LKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYEAFHKELDYVKQLWKNRQDLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

[Close]

BLAST of MS003900.1 vs. ExPASy TrEMBL
Match: A0A1S3BR59 (uncharacterized protein LOC103492293 OS=Cucumis melo OX=3656 GN=LOC103492293 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.0e-58
Identity = 115/122 (94.26%), Postives = 118/122 (96.72%), Query Frame = 0


Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60
           MASKL QLQSKATQASQFVLKNGCSYYKQLLEQNKQ+IQEP TVEKCNELSKQLLYTRLA
Sbjct: 1   MASKLAQLQSKATQASQFVLKNGCSYYKQLLEQNKQYIQEPPTVEKCNELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYESFHKELD VK LWKNRQ+LKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYESFHKELDYVKQLWKNRQDLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

[Close]

BLAST of MS003900.1 vs. ExPASy TrEMBL
Match: A0A6J1JKR1 (uncharacterized protein LOC111485310 OS=Cucurbita maxima OX=3661 GN=LOC111485310 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.5e-58
Identity = 114/122 (93.44%), Postives = 118/122 (96.72%), Query Frame = 0


Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60
           MASKLTQLQSKATQASQFVLK+GCSYYKQLLEQNKQFIQEP TVEKCN LSKQLLYTRLA
Sbjct: 1   MASKLTQLQSKATQASQFVLKHGCSYYKQLLEQNKQFIQEPPTVEKCNLLSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYESFHKELD VK LWKNRQE++VEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYESFHKELDYVKQLWKNRQEMRVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

[Close]

BLAST of MS003900.1 vs. ExPASy TrEMBL
Match: A0A6J1H8S3 (uncharacterized protein LOC111461537 OS=Cucurbita moschata OX=3662 GN=LOC111461537 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.4e-57
Identity = 113/122 (92.62%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60
           MASKLTQLQSKATQASQFVLK+GCSYYKQLLEQNKQFIQEP TVEKCN+LSKQL YTRLA
Sbjct: 1   MASKLTQLQSKATQASQFVLKHGCSYYKQLLEQNKQFIQEPPTVEKCNQLSKQLFYTRLA 60

Query: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYESFHKELD VK LWKNRQE+KVEDAGIAALFGLECFAWFCAGEIVGRGFT TGY
Sbjct: 61  SIPGRYESFHKELDYVKQLWKNRQEMKVEDAGIAALFGLECFAWFCAGEIVGRGFTVTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

[Close]

BLAST of MS003900.1 vs. TAIR 10
Match: AT2G19680.1 (Mitochondrial ATP synthase subunit G protein )

HSP 1 Score: 208.8 bits (530), Expect = 2.5e-54
Identity = 103/121 (85.12%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60
           MASKL QLQSKA QAS+FV K+G SYYKQLLEQNKQ+IQEPAT+EKC+ELSKQLLYTRLA
Sbjct: 1   MASKLVQLQSKACQASKFVAKHGNSYYKQLLEQNKQYIQEPATIEKCSELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYE+F KE+D  KNL KNR  LKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYETFRKEVDYAKNLLKNRANLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 Y 122
           Y
Sbjct: 121 Y 121

[Close]

BLAST of MS003900.1 vs. TAIR 10
Match: AT2G19680.2 (Mitochondrial ATP synthase subunit G protein )

HSP 1 Score: 208.8 bits (530), Expect = 2.5e-54
Identity = 103/121 (85.12%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60
           MASKL QLQSKA QAS+FV K+G SYYKQLLEQNKQ+IQEPAT+EKC+ELSKQLLYTRLA
Sbjct: 1   MASKLVQLQSKACQASKFVAKHGNSYYKQLLEQNKQYIQEPATIEKCSELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYE+F KE+D  KNL KNR  LKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYETFRKEVDYAKNLLKNRANLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 Y 122
           Y
Sbjct: 121 Y 121

[Close]

BLAST of MS003900.1 vs. TAIR 10
Match: AT4G29480.1 (Mitochondrial ATP synthase subunit G protein )

HSP 1 Score: 205.3 bits (521), Expect = 2.8e-53
Identity = 99/121 (81.82%), Postives = 110/121 (90.91%), Query Frame = 0


Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60
           MASKL Q+QSKA +AS+FV K+G SYY+QLLE+NKQ+IQEPATVEKC ELSKQLLYTRLA
Sbjct: 1   MASKLIQVQSKACEASKFVAKHGTSYYRQLLEKNKQYIQEPATVEKCQELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYE+F KE+D  KNLWKNR  LKVEDAGIAALFGLECFAW+CAGEI GRGFTFTGY
Sbjct: 61  SIPGRYETFWKEVDYAKNLWKNRSGLKVEDAGIAALFGLECFAWYCAGEIAGRGFTFTGY 120

Query: 121 Y 122
           Y
Sbjct: 121 Y 121

[Close]

BLAST of MS003900.1 vs. TAIR 10
Match: AT4G26210.1 (Mitochondrial ATP synthase subunit G protein )

HSP 1 Score: 200.7 bits (509), Expect = 6.9e-52
Identity = 97/121 (80.17%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60
           MASKL QL+SKA +AS+FV K+G +YYKQLL++NK +IQEPAT+EKCNELSKQLLYTRLA
Sbjct: 1   MASKLLQLKSKACEASKFVSKHGTTYYKQLLDKNKMYIQEPATIEKCNELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGR ESF KE++ VK LWKNR +LKVEDAGIAALFGLECFAW+CAGEIVGRGFTFTGY
Sbjct: 61  SIPGRSESFWKEVNHVKGLWKNRADLKVEDAGIAALFGLECFAWYCAGEIVGRGFTFTGY 120

Query: 121 Y 122
           Y
Sbjct: 121 Y 121

[Close]

BLAST of MS003900.1 vs. TAIR 10
Match: AT4G26210.2 (Mitochondrial ATP synthase subunit G protein )

HSP 1 Score: 200.7 bits (509), Expect = 6.9e-52
Identity = 97/121 (80.17%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPATVEKCNELSKQLLYTRLA 60
           MASKL QL+SKA +AS+FV K+G +YYKQLL++NK +IQEPAT+EKCNELSKQLLYTRLA
Sbjct: 1   MASKLLQLKSKACEASKFVSKHGTTYYKQLLDKNKMYIQEPATIEKCNELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGR ESF KE++ VK LWKNR +LKVEDAGIAALFGLECFAW+CAGEIVGRGFTFTGY
Sbjct: 61  SIPGRSESFWKEVNHVKGLWKNRADLKVEDAGIAALFGLECFAWYCAGEIVGRGFTFTGY 120

Query: 121 Y 122
           Y
Sbjct: 121 Y 121

The following BLAST results are available for this feature:

BLAST of MS003900.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159243.1	5.3e-62	99.18	uncharacterized protein LOC111025660 [Momordica charantia]	[more]
XP_004135693.1	2.1e-58	94.26	uncharacterized protein LOC101205555 [Cucumis sativus] >XP_031744268.1 uncharact...	[more]
XP_008450823.1	2.1e-58	94.26	PREDICTED: uncharacterized protein LOC103492293 [Cucumis melo]	[more]
XP_038878413.1	2.7e-58	94.26	uncharacterized protein LOC120070653 [Benincasa hispida]	[more]
XP_022987908.1	1.3e-57	93.44	uncharacterized protein LOC111485310 [Cucurbita maxima]	[more]

BLAST of MS003900.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS003900.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DYA0	2.6e-62	99.18	uncharacterized protein LOC111025660 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A0A0LYS9	1.0e-58	94.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580240 PE=3 SV=1	[more]
A0A1S3BR59	1.0e-58	94.26	uncharacterized protein LOC103492293 OS=Cucumis melo OX=3656 GN=LOC103492293 PE=...	[more]
A0A6J1JKR1	6.5e-58	93.44	uncharacterized protein LOC111485310 OS=Cucurbita maxima OX=3661 GN=LOC111485310...	[more]
A0A6J1H8S3	1.4e-57	92.62	uncharacterized protein LOC111461537 OS=Cucurbita moschata OX=3662 GN=LOC1114615...	[more]

BLAST of MS003900.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19680.1	2.5e-54	85.12	Mitochondrial ATP synthase subunit G protein	[more]
AT2G19680.2	2.5e-54	85.12	Mitochondrial ATP synthase subunit G protein	[more]
AT4G29480.1	2.8e-53	81.82	Mitochondrial ATP synthase subunit G protein	[more]
AT4G26210.1	6.9e-52	80.17	Mitochondrial ATP synthase subunit G protein	[more]
AT4G26210.2	6.9e-52	80.17	Mitochondrial ATP synthase subunit G protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006808	ATP synthase, F0 complex, subunit G, mitochondrial	PFAM	PF04718	ATP-synt_G	coord: 15..120 e-value: 4.7E-22 score: 78.7
IPR006808	ATP synthase, F0 complex, subunit G, mitochondrial	PANTHER	PTHR12386	ATP SYNTHASE SUBUNIT	coord: 1..122
None	No IPR available	PANTHER	PTHR12386:SF34	ATPASE, F0 COMPLEX, SUBUNIT G-RELATED	coord: 1..122

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS003900	MS003900	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS003900.1-cds	MS003900.1-cds-scaffold127:1411107..1411290	CDS
MS003900.1-cds	MS003900.1-cds-scaffold127:1412630..1412811	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS003900.1	MS003900.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function	GO:0015078	proton transmembrane transporter activity