MS003727.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS003727.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	WD repeat-containing protein 11-like
Location	scaffold127: 30580 .. 33455 (-)
Sequence length	729
RNA-Seq Expression	MS003727.1
Synteny	MS003727.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGATCAGCTTGGTTGGTCAGCTTCAGCTTCTTTCTTCTGCAGTAACGATGCTGGCAGTGCCATCTCCATCCTTAATAGCTACTTTAGCTCGTAAGTTTCATGAATAAGCTCATGTACACACATATACATGTTACCTATATATTTCTTCAGAGTTAGAGACCATTTTTTATGTGACTTGAGGTGGTTCAAATGAATGAGCTGAATATTTTTAGTTCTAAAAAATTCATTAGCCTGGTGTTCTGATGTAAGGTGGAGGAAACCATCCTGCTGTTGCTGTTCCATTGGTTGCTTTAGGGACTCAAAGTGGAACAATTGATGTCATTGATGTTTCTGCCAATTCTGTTGCATCTTCCTTTTCTGTACATAATAGTGTTGTTAGAGGTTTACGGTGGCTTGGGAATTCCAGATTGGTGTCGTTTTCTTACAGTCAGGTATATACTTAAGCATTTTGCTAATAGTTTATGAGTTTTAATCTGTTCCTTTTAAAATTTATGAAGCAACTCATTTTAAGTTCAATATTCTGCTTGTGTACGTATTATATACAGTCTATTTAAAGTACATTGGGTTAGTAGTAACCTTGTTTGATTAACATATTCCTCTTTATGTTTTTTTTTTTTTAATTCTTGCAATGAAAGTCAATAGTAACATGCACTAGCAATCATGTGGACTCAGGTGAATGAAAAAACTGGAGGTTTCGTTAACCGTCTTGTTGTGACCTGTCTAAGAAGTGGCTATAATAAAACCTTCCGTGTTTTGCAAAAGCCAGAGCGTGCTCCCATCAGAGCTTTAAGAGCCTCTTCATCTGGAAGGTTGACCTTGAACTCAGCTTTCTGCTTGTTATTTTTCATATAATGTATTTTCTTCCACTACTTTCTTCGTTTCTGGAATTGTGGGGCAAGATACATTTGCTTCTACGTGAACTTTCCATCATAGATCCTCTCAATGAATTAATATCTTGATAGTGTTATGTAGATTAGTTGTGATATATGTGAATTAATCGTTAAAATATAGCATTTTCATGGGATGTAAACTCTATTGAACTATTGTTCGGGTGTTCATATTGTTGGAACGACGATATATTTCCCCCGCAGCTGCATTTTTTTGCTTGAAATTTATGCATTGTTGCTTCTTGCAGCTATCTTCCAGTAACAAACATTTTTTTTCTTTTTATGCGAATTAATTCTAGGTACCTTCTTATCCTGTTTCGAGATGCTCCTGTCGAAGTATGGGCAATGACAAAGACTCCTATCATGGTAAGTTGGCACACACAAATACTATTGATTTTCATTTTTGTTTCATATTTTTTACTATTAATACTAATCTTACATTGTGATGTTGACCGAAGAGTGAACTTTTTAATATTCATACACTTGAAAAAAAACCATGACTACTTTCTAATAATCCTACCGTTTTATCAAGCAATTGGATAGTTTTTTGTAACCTTGAAAATGACTTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTAATTAGAAACAAGATATTTGATTGATAAGATGAAATTAGAAAAAAAGGGGAGAGCCTGAGGAAGAACTAAGGAGGGACTATAAGAAACCCCTCCAACTCATCAAAACGTCATTTAAGCCATATAATAATTTGTGAAGGGAGAGAAAGGGTTTTTTTTTATCCCTTGGGTGGGGAGATGACTTATCTTCTCTTACGTGTAACTTTTTTATTTGAATGAGTTCTTTCTTATCAGTTTTGAATTTAAAAAAAAAAAACCATTGTTCTGCAATTTCAAAGCCTTCACTTCTTTGCACCAGGACACCTATTTTCTTAACGAGTTAGAAATATGATTAGTGTCATCTTTCAGGCATCGACCTAGCAGTAGAAGGAATTTCTTGTATTCAGTATATAAATCTTTGTTGTGCTTTCTGTTTATTTTTGTTTGAATGAATTCTTTCTTATCAGTTATGGATTTAAAAAAATACCATTGTTCGGCAATTCAGCGCCTTTACTTCTTTGCACCAGGACTCCTATTTTAATGTTTCTTAATGAGCTAGAAACATGATCAGCGTCATATTGCAGGCATTGCCCCCTAGCAGTAGAAGGAATTTCTTGTCCTCGGTCTATAAATTTTTTTTAACAAGATACGAACTTTTCGTTGAAACGATGAATAGGAACAAAATTGTTCAAAAGATACAAACTCCCTAGGGAATGACAAGTAAAGACAGTAAAGGACAAACAATAAATTTTTGTTGTGCTTTCTGTTGATTTTTCTTGCGTTATCTACATGAATTGCAAGAAAAGTTAATGTTTTTCATATCTATATTCTGTTGCACAAAATTTAAGAATAGTTATGGTTACTTTAACAAAAGGAATGTCTTGGTTAACTGAATATTCTACTCTCCGTCTGAAATATAATAATCATTTTGCTAAGATCTTTAAATGCACGATGCACCTACTCATGATATTTTCTATCTCCATGTAGCTTAGATCATTAGCTCTTCCATTTACTGTTTTGGAATGGACACTTCCAACAGTCCCACGACCTATTAAAGATCGTACAGCCATCACACAAGATGGCGCATCTTCACCAACTACGGCATCATTATCTGATTCTAGTAAGCTCGTTGTTTACATTATAATTTGCAATTGCTTCATCATTAAAAGATTGAATTGCTTCTTCACCAACTACTTCACATAATTAGGCTTCTGGATGGCATCACTTGCATTATTTATGTAAAACTTGGATTTCTGCATGCACTAAGTGAAACTACTTTTCACATCCAGAGGCACCAAACTCAGAAGTCAATCAAGATGAAACTTCTGAAAGTTTTGCTTTTGCACTGGTAAATGGCGCACTTGGTGTGTTTGAAGTTCATGGGCGAAGAATTCGGGACTTCAGG

mRNA sequence

ATGCAGATCAGCTTGGTTGGTCAGCTTCAGCTTCTTTCTTCTGCAGTAACGATGCTGGCAGTGCCATCTCCATCCTTAATAGCTACTTTAGCTCGTGGAGGAAACCATCCTGCTGTTGCTGTTCCATTGGTTGCTTTAGGGACTCAAAGTGGAACAATTGATGTCATTGATGTTTCTGCCAATTCTGTTGCATCTTCCTTTTCTGTACATAATAGTGTTGTTAGAGGTTTACGGTGGCTTGGGAATTCCAGATTGGTGTCGTTTTCTTACAGTCAGGTGAATGAAAAAACTGGAGGTTTCGTTAACCGTCTTGTTGTGACCTGTCTAAGAAGTGGCTATAATAAAACCTTCCGTGTTTTGCAAAAGCCAGAGCGTGCTCCCATCAGAGCTTTAAGAGCCTCTTCATCTGGAAGGTACCTTCTTATCCTGTTTCGAGATGCTCCTGTCGAAGTATGGGCAATGACAAAGACTCCTATCATGCTTAGATCATTAGCTCTTCCATTTACTGTTTTGGAATGGACACTTCCAACAGTCCCACGACCTATTAAAGATCGTACAGCCATCACACAAGATGGCGCATCTTCACCAACTACGGCATCATTATCTGATTCTAAGGCACCAAACTCAGAAGTCAATCAAGATGAAACTTCTGAAAGTTTTGCTTTTGCACTGGTAAATGGCGCACTTGGTGTGTTTGAAGTTCATGGGCGAAGAATTCGGGACTTCAGG

Coding sequence (CDS)

ATGCAGATCAGCTTGGTTGGTCAGCTTCAGCTTCTTTCTTCTGCAGTAACGATGCTGGCAGTGCCATCTCCATCCTTAATAGCTACTTTAGCTCGTGGAGGAAACCATCCTGCTGTTGCTGTTCCATTGGTTGCTTTAGGGACTCAAAGTGGAACAATTGATGTCATTGATGTTTCTGCCAATTCTGTTGCATCTTCCTTTTCTGTACATAATAGTGTTGTTAGAGGTTTACGGTGGCTTGGGAATTCCAGATTGGTGTCGTTTTCTTACAGTCAGGTGAATGAAAAAACTGGAGGTTTCGTTAACCGTCTTGTTGTGACCTGTCTAAGAAGTGGCTATAATAAAACCTTCCGTGTTTTGCAAAAGCCAGAGCGTGCTCCCATCAGAGCTTTAAGAGCCTCTTCATCTGGAAGGTACCTTCTTATCCTGTTTCGAGATGCTCCTGTCGAAGTATGGGCAATGACAAAGACTCCTATCATGCTTAGATCATTAGCTCTTCCATTTACTGTTTTGGAATGGACACTTCCAACAGTCCCACGACCTATTAAAGATCGTACAGCCATCACACAAGATGGCGCATCTTCACCAACTACGGCATCATTATCTGATTCTAAGGCACCAAACTCAGAAGTCAATCAAGATGAAACTTCTGAAAGTTTTGCTTTTGCACTGGTAAATGGCGCACTTGGTGTGTTTGAAGTTCATGGGCGAAGAATTCGGGACTTCAGG

Protein sequence

MQISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSANSVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVLQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRPIKDRTAITQDGASSPTTASLSDSKAPNSEVNQDETSESFAFALVNGALGVFEVHGRRIRDFR

Homology

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BLAST of MS003727.1 vs. NCBI nr
Match: XP_022144884.1 (WD repeat-containing protein 11-like, partial [Momordica charantia])

HSP 1 Score: 453.8 bits (1166), Expect = 9.7e-124
Identity = 240/242 (99.17%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 2   QISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 61
           +ISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN
Sbjct: 316 KISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 375

Query: 62  SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVLQ 121
           SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVLQ
Sbjct: 376 SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVLQ 435

Query: 122 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP 181
           KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP
Sbjct: 436 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP 495

Query: 182 IKDRTAITQDGASSPTTASLSDSKAPNSEVNQDETSESFAFALVNGALGVFEVHGRRIRD 241
           IKDRTAITQDGASSPTTASLSDSKAPNSE NQDETSESFAFALVNGALGVFEVHGRRIRD
Sbjct: 496 IKDRTAITQDGASSPTTASLSDSKAPNSEXNQDETSESFAFALVNGALGVFEVHGRRIRD 555

Query: 242 FR 244
           FR
Sbjct: 556 FR 557

[Close]

BLAST of MS003727.1 vs. NCBI nr
Match: XP_023530451.1 (WD repeat-containing protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424.9 bits (1091), Expect = 4.8e-115
Identity = 222/242 (91.74%), Postives = 232/242 (95.87%), Query Frame = 0


Query: 2   QISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 61
           +I+LVGQLQLLSSA+TMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN
Sbjct: 498 KINLVGQLQLLSSAITMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 557

Query: 62  SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVLQ 121
           SVASSFSVHNS VRGLRWLGNSRLVSFSYSQVNEKTGGF+NRLVVTCLRSG+N+TFRVLQ
Sbjct: 558 SVASSFSVHNSTVRGLRWLGNSRLVSFSYSQVNEKTGGFINRLVVTCLRSGFNRTFRVLQ 617

Query: 122 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP 181
           KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPR 
Sbjct: 618 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRS 677

Query: 182 IKDRTAITQDGASSPTTASLSDSKAPNSEVNQDETSESFAFALVNGALGVFEVHGRRIRD 241
           + +RT +T D  SSPT ASLSDSK PNSE NQDETSESF+FALVNGALGVFEVHGRRIRD
Sbjct: 678 VAERTTMTADTVSSPTKASLSDSKTPNSEGNQDETSESFSFALVNGALGVFEVHGRRIRD 737

Query: 242 FR 244
           FR
Sbjct: 738 FR 739

[Close]

BLAST of MS003727.1 vs. NCBI nr
Match: XP_023004047.1 (WD repeat-containing protein 11-like [Cucurbita maxima])

HSP 1 Score: 424.9 bits (1091), Expect = 4.8e-115
Identity = 222/242 (91.74%), Postives = 232/242 (95.87%), Query Frame = 0


Query: 2   QISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 61
           +I+LVGQLQLLSSA+TMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN
Sbjct: 498 KINLVGQLQLLSSAITMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 557

Query: 62  SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVLQ 121
           SVASSFSVHNS VRGLRWLGNSRLVSFSYSQVNEKTGGF+NRLVVTCLRSG+N+TFRVLQ
Sbjct: 558 SVASSFSVHNSTVRGLRWLGNSRLVSFSYSQVNEKTGGFINRLVVTCLRSGFNRTFRVLQ 617

Query: 122 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP 181
           KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPR 
Sbjct: 618 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRS 677

Query: 182 IKDRTAITQDGASSPTTASLSDSKAPNSEVNQDETSESFAFALVNGALGVFEVHGRRIRD 241
           + +RT +T D  SSPT ASLSDSK PNSE NQDETSESF+FALVNGALGVFEVHGRRIRD
Sbjct: 678 VAERTTMTADTVSSPTKASLSDSKTPNSEGNQDETSESFSFALVNGALGVFEVHGRRIRD 737

Query: 242 FR 244
           FR
Sbjct: 738 FR 739

[Close]

BLAST of MS003727.1 vs. NCBI nr
Match: XP_022931575.1 (WD repeat-containing protein 11-like [Cucurbita moschata])

HSP 1 Score: 424.9 bits (1091), Expect = 4.8e-115
Identity = 222/242 (91.74%), Postives = 232/242 (95.87%), Query Frame = 0


Query: 2   QISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 61
           +I+LVGQLQLLSSA+TMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN
Sbjct: 498 KINLVGQLQLLSSAITMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 557

Query: 62  SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVLQ 121
           SVASSFSVHNS VRGLRWLGNSRLVSFSYSQVNEKTGGF+NRLVVTCLRSG+N+TFRVLQ
Sbjct: 558 SVASSFSVHNSTVRGLRWLGNSRLVSFSYSQVNEKTGGFINRLVVTCLRSGFNRTFRVLQ 617

Query: 122 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP 181
           KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPR 
Sbjct: 618 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRS 677

Query: 182 IKDRTAITQDGASSPTTASLSDSKAPNSEVNQDETSESFAFALVNGALGVFEVHGRRIRD 241
           + +RT +T D  SSPT ASLSDSK PNSE NQDETSESF+FALVNGALGVFEVHGRRIRD
Sbjct: 678 VAERTTMTADTVSSPTKASLSDSKTPNSEGNQDETSESFSFALVNGALGVFEVHGRRIRD 737

Query: 242 FR 244
           FR
Sbjct: 738 FR 739

[Close]

BLAST of MS003727.1 vs. NCBI nr
Match: KAG6587891.1 (WD repeat-containing protein 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021775.1 WD repeat-containing protein 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 421.8 bits (1083), Expect = 4.1e-114
Identity = 221/242 (91.32%), Postives = 231/242 (95.45%), Query Frame = 0


Query: 2   QISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 61
           +I+LVGQLQLLSSA+TMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN
Sbjct: 498 KINLVGQLQLLSSAITMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 557

Query: 62  SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVLQ 121
           SVASSFSVHNS VRGLRWLGNSRLVSFSYSQVNEKTGGF+NRLVVTCLRSG+N+TFRVLQ
Sbjct: 558 SVASSFSVHNSTVRGLRWLGNSRLVSFSYSQVNEKTGGFINRLVVTCLRSGFNRTFRVLQ 617

Query: 122 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP 181
           KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPR 
Sbjct: 618 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRS 677

Query: 182 IKDRTAITQDGASSPTTASLSDSKAPNSEVNQDETSESFAFALVNGALGVFEVHGRRIRD 241
           + +RT +T D  SSPT ASLSDSK  NSE NQDETSESF+FALVNGALGVFEVHGRRIRD
Sbjct: 678 VAERTTMTADTVSSPTKASLSDSKTSNSEGNQDETSESFSFALVNGALGVFEVHGRRIRD 737

Query: 242 FR 244
           FR
Sbjct: 738 FR 739

[Close]

BLAST of MS003727.1 vs. ExPASy Swiss-Prot
Match: F1QEB7 (WD repeat-containing protein 11 OS=Danio rerio OX=7955 GN=wdr11 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-12
Identity = 59/217 (27.19%), Postives = 108/217 (49.77%), Query Frame = 0


Query: 42  PLVALGTQSGTIDVIDVSANSVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFV 101
           PL+A+GT +G++ V ++++  +    SVH+  VRG+ W+  +  +SF+ S V    G   
Sbjct: 491 PLLAVGTSNGSVLVYNLTSGLLHKELSVHSCEVRGIEWISLTSFLSFATS-VPNNLGLVR 550

Query: 102 NRLVVTCLRSGYNKTFRVLQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIML 161
           N L    LR+G    FR  +  +   I  ++ S   +YL+++FRD P+E+W + +T  +L
Sbjct: 551 NELQHVDLRTGRCFAFRGERGNDEPAIEMIKVSHLKQYLVVVFRDKPLELWDV-RTGTLL 610

Query: 162 RSLALPF---TVLEWTLPTVPRPIKDRTAITQDGASSPTTASLSDSKAPNSEV------- 221
           R +A  F   T LEW+     + +K +    ++  +  TT + ++  +  S V       
Sbjct: 611 REMAKNFPTVTALEWSPSHNLKSLKKKQLAAREAMARQTTLADAEQSSVESSVISLLQDA 670

Query: 222 -NQDETS------ESFAFALVNGALGVFEVHGRRIRD 242
            ++ E+S      E F F   +G +    V G  ++D
Sbjct: 671 ESKSESSQGISAREHFVFTDTDGQVYHITVEGNTVKD 705

[Close]

BLAST of MS003727.1 vs. ExPASy Swiss-Prot
Match: Q8K1X1 (WD repeat-containing protein 11 OS=Mus musculus OX=10090 GN=Wdr11 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.0e-11
Identity = 56/217 (25.81%), Postives = 106/217 (48.85%), Query Frame = 0


Query: 42  PLVALGTQSGTIDVIDVSANSVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFV 101
           PL+A+GT +G++ V  +++  +    SVH+  V+G+ W   +  +SF+ S  N   G   
Sbjct: 485 PLLAVGTSNGSVLVYHLTSGLLHKELSVHSCEVKGIEWTSLTSFLSFAASTPN-NMGLVR 544

Query: 102 NRLVVTCLRSGYNKTFRVLQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIML 161
           N L +  L +G +  FR  +  + +PI  ++ S   +YL ++F+D P+E+W + +T  +L
Sbjct: 545 NELQLVDLPTGRSTAFRGDRGNDESPIEMIKVSHLKQYLAVVFKDKPLELWDI-RTCTLL 604

Query: 162 RSLALPF---TVLEWTLPTVPRPIKDRTAITQD-------------GASSPTTASLSDSK 221
           R ++  F   T LEW+     + ++ +   T++             GA   +  SL    
Sbjct: 605 REMSKSFPAITALEWSPSHNLKSLRKKQLATREAMARQTVVSDAELGAVESSVISLLQEA 664

Query: 222 APNSEVNQD-ETSESFAFALVNGALGVFEVHGRRIRD 242
              +E++Q+    E F F   +G +    V G  ++D
Sbjct: 665 ESKAELSQNISAREHFVFTDNDGQVYHLTVEGNSVKD 699

[Close]

BLAST of MS003727.1 vs. ExPASy Swiss-Prot
Match: Q9BZH6 (WD repeat-containing protein 11 OS=Homo sapiens OX=9606 GN=WDR11 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.3e-11
Identity = 55/217 (25.35%), Postives = 105/217 (48.39%), Query Frame = 0


Query: 42  PLVALGTQSGTIDVIDVSANSVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFV 101
           PL+A+GT +G++ V  +++  +    S+H+  V+G+ W   +  +SF+ S  N   G   
Sbjct: 486 PLLAVGTSNGSVLVYHLTSGLLHKELSIHSCEVKGIEWTSLTSFLSFATSTPN-NMGLVR 545

Query: 102 NRLVVTCLRSGYNKTFRVLQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIML 161
           N L +  L +G +  FR  +  + + I  ++ S   +YL ++FRD P+E+W + +T  +L
Sbjct: 546 NELQLVDLPTGRSIAFRGERGNDESAIEMIKVSHLKQYLAVVFRDKPLELWDV-RTCTLL 605

Query: 162 RSLALPF---TVLEWTLPTVPRPIKDRTAITQDGASSPTTA-------------SLSDSK 221
           R ++  F   T LEW+     + ++ +   T++  +  T               SL    
Sbjct: 606 REMSKNFPTITALEWSPSHNLKSLRKKQLATREAMARQTVVSDTELSIVESSVISLLQEA 665

Query: 222 APNSEVNQD-ETSESFAFALVNGALGVFEVHGRRIRD 242
              SE++Q+    E F F  ++G +    V G  ++D
Sbjct: 666 ESKSELSQNISAREHFVFTDIDGQVYHLTVEGNSVKD 700

[Close]

BLAST of MS003727.1 vs. ExPASy TrEMBL
Match: A0A6J1CTK0 (WD repeat-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111014455 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.7e-124
Identity = 240/242 (99.17%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 2   QISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 61
           +ISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN
Sbjct: 316 KISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 375

Query: 62  SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVLQ 121
           SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVLQ
Sbjct: 376 SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVLQ 435

Query: 122 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP 181
           KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP
Sbjct: 436 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP 495

Query: 182 IKDRTAITQDGASSPTTASLSDSKAPNSEVNQDETSESFAFALVNGALGVFEVHGRRIRD 241
           IKDRTAITQDGASSPTTASLSDSKAPNSE NQDETSESFAFALVNGALGVFEVHGRRIRD
Sbjct: 496 IKDRTAITQDGASSPTTASLSDSKAPNSEXNQDETSESFAFALVNGALGVFEVHGRRIRD 555

Query: 242 FR 244
           FR
Sbjct: 556 FR 557

[Close]

BLAST of MS003727.1 vs. ExPASy TrEMBL
Match: A0A6J1KPB4 (WD repeat-containing protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111497469 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.3e-115
Identity = 222/242 (91.74%), Postives = 232/242 (95.87%), Query Frame = 0


Query: 2   QISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 61
           +I+LVGQLQLLSSA+TMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN
Sbjct: 498 KINLVGQLQLLSSAITMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 557

Query: 62  SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVLQ 121
           SVASSFSVHNS VRGLRWLGNSRLVSFSYSQVNEKTGGF+NRLVVTCLRSG+N+TFRVLQ
Sbjct: 558 SVASSFSVHNSTVRGLRWLGNSRLVSFSYSQVNEKTGGFINRLVVTCLRSGFNRTFRVLQ 617

Query: 122 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP 181
           KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPR 
Sbjct: 618 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRS 677

Query: 182 IKDRTAITQDGASSPTTASLSDSKAPNSEVNQDETSESFAFALVNGALGVFEVHGRRIRD 241
           + +RT +T D  SSPT ASLSDSK PNSE NQDETSESF+FALVNGALGVFEVHGRRIRD
Sbjct: 678 VAERTTMTADTVSSPTKASLSDSKTPNSEGNQDETSESFSFALVNGALGVFEVHGRRIRD 737

Query: 242 FR 244
           FR
Sbjct: 738 FR 739

[Close]

BLAST of MS003727.1 vs. ExPASy TrEMBL
Match: A0A6J1EZS8 (WD repeat-containing protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC111437747 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.3e-115
Identity = 222/242 (91.74%), Postives = 232/242 (95.87%), Query Frame = 0


Query: 2   QISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 61
           +I+LVGQLQLLSSA+TMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN
Sbjct: 498 KINLVGQLQLLSSAITMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 557

Query: 62  SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVLQ 121
           SVASSFSVHNS VRGLRWLGNSRLVSFSYSQVNEKTGGF+NRLVVTCLRSG+N+TFRVLQ
Sbjct: 558 SVASSFSVHNSTVRGLRWLGNSRLVSFSYSQVNEKTGGFINRLVVTCLRSGFNRTFRVLQ 617

Query: 122 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP 181
           KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPR 
Sbjct: 618 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRS 677

Query: 182 IKDRTAITQDGASSPTTASLSDSKAPNSEVNQDETSESFAFALVNGALGVFEVHGRRIRD 241
           + +RT +T D  SSPT ASLSDSK PNSE NQDETSESF+FALVNGALGVFEVHGRRIRD
Sbjct: 678 VAERTTMTADTVSSPTKASLSDSKTPNSEGNQDETSESFSFALVNGALGVFEVHGRRIRD 737

Query: 242 FR 244
           FR
Sbjct: 738 FR 739

[Close]

BLAST of MS003727.1 vs. ExPASy TrEMBL
Match: A0A6J1JAR1 (WD repeat-containing protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111485100 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 1.1e-112
Identity = 221/242 (91.32%), Postives = 232/242 (95.87%), Query Frame = 0


Query: 2   QISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 61
           +ISLVGQLQLLSSAVTMLAVPSPSL+AT+ARGGN PAVAVPLVALGTQSGTIDVIDVSAN
Sbjct: 476 KISLVGQLQLLSSAVTMLAVPSPSLVATIARGGNDPAVAVPLVALGTQSGTIDVIDVSAN 535

Query: 62  SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVLQ 121
           SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEK+GGF+NRLVVTCLRSG+N+TFRVLQ
Sbjct: 536 SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKSGGFINRLVVTCLRSGFNRTFRVLQ 595

Query: 122 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP 181
           KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP
Sbjct: 596 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP 655

Query: 182 IKDRTAITQDGASSPTTASLSDSKAPNSEVNQDETSESFAFALVNGALGVFEVHGRRIRD 241
           +K+RT +T D  SS T ASLSDSKAP  E NQDETSESFAFALVNGALGVFEV+GRRIRD
Sbjct: 656 VKERTTMTPDTVSSSTKASLSDSKAP--EGNQDETSESFAFALVNGALGVFEVNGRRIRD 715

Query: 242 FR 244
           FR
Sbjct: 716 FR 715

[Close]

BLAST of MS003727.1 vs. ExPASy TrEMBL
Match: A0A5A7U9D7 (WD repeat-containing protein 11 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001680 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.4e-112
Identity = 219/242 (90.50%), Postives = 233/242 (96.28%), Query Frame = 0


Query: 2   QISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 61
           +ISLVGQLQLLSSAVTMLAVPSPSLIATLARGGN+PAVAVPLVALGTQSGTIDVID+SAN
Sbjct: 501 KISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNYPAVAVPLVALGTQSGTIDVIDISAN 560

Query: 62  SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVLQ 121
           SV+SSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEK+GG++NRLVVTCLRSG+N+TFRVLQ
Sbjct: 561 SVSSSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKSGGYLNRLVVTCLRSGFNRTFRVLQ 620

Query: 122 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP 181
           KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP
Sbjct: 621 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRP 680

Query: 182 IKDRTAITQDGASSPTTASLSDSKAPNSEVNQDETSESFAFALVNGALGVFEVHGRRIRD 241
           +K+RT +T D  SSPT ASLSD+KA   E NQ+ETSESFAFALVNGALGVFEVHGRRIRD
Sbjct: 681 VKERTTMTPDTVSSPTKASLSDTKA--QEGNQEETSESFAFALVNGALGVFEVHGRRIRD 740

Query: 242 FR 244
           FR
Sbjct: 741 FR 740

[Close]

BLAST of MS003727.1 vs. TAIR 10
Match: AT3G33530.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 339.0 bits (868), Expect = 3.2e-93
Identity = 188/250 (75.20%), Postives = 204/250 (81.60%), Query Frame = 0


Query: 1   MQISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSA 60
           MQISL GQLQLLSS V+ LAVPSPSL ATLARGGN PA AVPLVALGTQSGTIDV+DVS 
Sbjct: 492 MQISLTGQLQLLSSTVSTLAVPSPSLTATLARGGNIPAAAVPLVALGTQSGTIDVVDVST 551

Query: 61  NSVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVL 120
           N+VA+S SVH  VVRGLRWLGNSRLVSFSYSQVN+K+ G++NRLVVTCLRSG NK FR L
Sbjct: 552 NAVAASTSVHTGVVRGLRWLGNSRLVSFSYSQVNDKSRGYINRLVVTCLRSGLNKPFRDL 611

Query: 121 QKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPR 180
           QKPER PIRALR SSSGRYLLILFRDAPVEVWAMTK P+MLRSLALPFTV+EWTLP VPR
Sbjct: 612 QKPERTPIRALRTSSSGRYLLILFRDAPVEVWAMTKHPVMLRSLALPFTVVEWTLPAVPR 671

Query: 181 PIKDRTAITQDGASSPTTASLSD-------SKAPNSEVNQDETSESFAFALVNGALGVFE 240
           P +   +     AS   TAS          S +  S+ +Q+ET ESFAFALVNGALGVFE
Sbjct: 672 PGQGGPSKQSLSASEGVTASGDSWAVIDIFSASVGSDGSQEETVESFAFALVNGALGVFE 731

Query: 241 VHGRRIRDFR 244
           V GRRIRDFR
Sbjct: 732 VQGRRIRDFR 741

[Close]

BLAST of MS003727.1 vs. TAIR 10
Match: AT2G26610.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 335.9 bits (860), Expect = 2.7e-92
Identity = 178/251 (70.92%), Postives = 216/251 (86.06%), Query Frame = 0


Query: 2   QISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSAN 61
           +I+LVGQLQLLSSAVT+LA+P+PS+ ATLARGGN PAV VPLVALGT++GTIDV+DVSAN
Sbjct: 439 EITLVGQLQLLSSAVTVLAIPTPSMTATLARGGNFPAVVVPLVALGTEAGTIDVVDVSAN 498

Query: 62  SVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVLQ 121
           +VA+SFS H S +RGL WLGNSRLVS+S S+V+++TGG+VN+LVVTCLRSG ++ FRVLQ
Sbjct: 499 AVAASFSAHTSSIRGLNWLGNSRLVSYSCSRVSKRTGGYVNKLVVTCLRSGVSRGFRVLQ 558

Query: 122 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVP-- 181
           KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTK+P+MLRSLALPFTVLEWTLPT+P  
Sbjct: 559 KPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKSPVMLRSLALPFTVLEWTLPTIPSI 618

Query: 182 --RPIKDRTAITQDGASSPT-----TASLSDSKAPNSEVNQDETSESFAFALVNGALGVF 241
             + +  + +++ +   + T     T + SDSKA  ++  QD+ SESFAFALVNG+LGVF
Sbjct: 619 AQKSLSKQLSMSSNQEVNVTPSDIETPNASDSKAVAADALQDDASESFAFALVNGSLGVF 678

Query: 242 EVHGRRIRDFR 244
           EV+GRRIRDFR
Sbjct: 679 EVYGRRIRDFR 689

[Close]

BLAST of MS003727.1 vs. TAIR 10
Match: AT3G33530.3 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 335.5 bits (859), Expect = 3.6e-92
Identity = 189/258 (73.26%), Postives = 205/258 (79.46%), Query Frame = 0


Query: 1   MQISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSA 60
           MQISL GQLQLLSS V+ LAVPSPSL ATLARGGN PA AVPLVALGTQSGTIDV+DVS 
Sbjct: 490 MQISLTGQLQLLSSTVSTLAVPSPSLTATLARGGNIPAAAVPLVALGTQSGTIDVVDVST 549

Query: 61  NSVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVL 120
           N+VA+S SVH  VVRGLRWLGNSRLVSFSYSQVN+K+ G++NRLVVTCLRSG NK FR L
Sbjct: 550 NAVAASTSVHTGVVRGLRWLGNSRLVSFSYSQVNDKSRGYINRLVVTCLRSGLNKPFRDL 609

Query: 121 QKPERAPIRALRASSSGR---------------YLLILFRDAPVEVWAMTKTPIMLRSLA 180
           QKPER PIRALR SSSGR               YLLILFRDAPVEVWAMTK P+MLRSLA
Sbjct: 610 QKPERTPIRALRTSSSGRSSRILLHYFKDEELLYLLILFRDAPVEVWAMTKHPVMLRSLA 669

Query: 181 LPFTVLEWTLPTVPRPIKDRTAITQDGASSPTTASLSDSKAPNSEVNQDETSESFAFALV 240
           LPFTV+EWTLP VPRP +   +     AS   TAS  DS +  S+ +Q+ET ESFAFALV
Sbjct: 670 LPFTVVEWTLPAVPRPGQGGPSKQSLSASEGVTAS-GDSSSVGSDGSQEETVESFAFALV 729

Query: 241 NGALGVFEVHGRRIRDFR 244
           NGALGVFEV GRRIRDFR
Sbjct: 730 NGALGVFEVQGRRIRDFR 746

[Close]

BLAST of MS003727.1 vs. TAIR 10
Match: AT3G33530.2 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 328.9 bits (842), Expect = 3.3e-90
Identity = 188/265 (70.94%), Postives = 204/265 (76.98%), Query Frame = 0


Query: 1   MQISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNHPAVAVPLVALGTQSGTIDVIDVSA 60
           MQISL GQLQLLSS V+ LAVPSPSL ATLARGGN PA AVPLVALGTQSGTIDV+DVS 
Sbjct: 490 MQISLTGQLQLLSSTVSTLAVPSPSLTATLARGGNIPAAAVPLVALGTQSGTIDVVDVST 549

Query: 61  NSVASSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKTGGFVNRLVVTCLRSGYNKTFRVL 120
           N+VA+S SVH  VVRGLRWLGNSRLVSFSYSQVN+K+ G++NRLVVTCLRSG NK FR L
Sbjct: 550 NAVAASTSVHTGVVRGLRWLGNSRLVSFSYSQVNDKSRGYINRLVVTCLRSGLNKPFRDL 609

Query: 121 QKPERAPIRALRASSSGR---------------YLLILFRDAPVEVWAMTKTPIMLRSLA 180
           QKPER PIRALR SSSGR               YLLILFRDAPVEVWAMTK P+MLRSLA
Sbjct: 610 QKPERTPIRALRTSSSGRSSRILLHYFKDEELLYLLILFRDAPVEVWAMTKHPVMLRSLA 669

Query: 181 LPFTVLEWTLPTVPRPIKDRTAITQDGASSPTTASLSD-------SKAPNSEVNQDETSE 240
           LPFTV+EWTLP VPRP +   +     AS   TAS          S +  S+ +Q+ET E
Sbjct: 670 LPFTVVEWTLPAVPRPGQGGPSKQSLSASEGVTASGDSWAVIDIFSASVGSDGSQEETVE 729

Query: 241 SFAFALVNGALGVFEVHGRRIRDFR 244
           SFAFALVNGALGVFEV GRRIRDFR
Sbjct: 730 SFAFALVNGALGVFEVQGRRIRDFR 754

The following BLAST results are available for this feature:

BLAST of MS003727.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144884.1	9.7e-124	99.17	WD repeat-containing protein 11-like, partial [Momordica charantia]	[more]
XP_023530451.1	4.8e-115	91.74	WD repeat-containing protein 11-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004047.1	4.8e-115	91.74	WD repeat-containing protein 11-like [Cucurbita maxima]	[more]
XP_022931575.1	4.8e-115	91.74	WD repeat-containing protein 11-like [Cucurbita moschata]	[more]
KAG6587891.1	4.1e-114	91.32	WD repeat-containing protein 11, partial [Cucurbita argyrosperma subsp. sororia]...	[more]

BLAST of MS003727.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F1QEB7	1.6e-12	27.19	WD repeat-containing protein 11 OS=Danio rerio OX=7955 GN=wdr11 PE=2 SV=1	[more]
Q8K1X1	1.0e-11	25.81	WD repeat-containing protein 11 OS=Mus musculus OX=10090 GN=Wdr11 PE=1 SV=1	[more]
Q9BZH6	2.3e-11	25.35	WD repeat-containing protein 11 OS=Homo sapiens OX=9606 GN=WDR11 PE=1 SV=1	[more]

BLAST of MS003727.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTK0	4.7e-124	99.17	WD repeat-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1KPB4	2.3e-115	91.74	WD repeat-containing protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111497469...	[more]
A0A6J1EZS8	2.3e-115	91.74	WD repeat-containing protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC1114377...	[more]
A0A6J1JAR1	1.1e-112	91.32	WD repeat-containing protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111485100...	[more]
A0A5A7U9D7	2.4e-112	90.50	WD repeat-containing protein 11 isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of MS003727.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G33530.1	3.2e-93	75.20	Transducin family protein / WD-40 repeat family protein	[more]
AT2G26610.1	2.7e-92	70.92	Transducin family protein / WD-40 repeat family protein	[more]
AT3G33530.3	3.6e-92	73.26	Transducin family protein / WD-40 repeat family protein	[more]
AT3G33530.2	3.3e-90	70.94	Transducin family protein / WD-40 repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 4..203 e-value: 5.1E-9 score: 37.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..212
None	No IPR available	PANTHER	PTHR14593:SF7	WD40/YVTN REPEAT-LIKE-CONTAINING DOMAIN-CONTAINING PROTEIN-RELATED	coord: 2..243
None	No IPR available	SUPERFAMILY	50993	Peptidase/esterase 'gauge' domain	coord: 44..197
IPR039694	WD repeat-containing protein 11	PANTHER	PTHR14593	WD REPEAT-CONTAINING PROTEIN 11	coord: 2..243

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS003727	MS003727	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS003727.1-cds	MS003727.1-cds-scaffold127:30580..30695	CDS
MS003727.1-cds	MS003727.1-cds-scaffold127:30865..30997	CDS
MS003727.1-cds	MS003727.1-cds-scaffold127:32199..32265	CDS
MS003727.1-cds	MS003727.1-cds-scaffold127:32643..32779	CDS
MS003727.1-cds	MS003727.1-cds-scaffold127:33021..33202	CDS
MS003727.1-cds	MS003727.1-cds-scaffold127:33362..33455	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS003727.1	MS003727.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding