MS003344.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS003344.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ataxin-10
Location	scaffold234: 2246712 .. 2248291 (-)
Sequence length	1476
RNA-Seq Expression	MS003344.1
Synteny	MS003344.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAATCCATCATTATCTGAGCAATCTATACCTGAAAGAATTATTCAGCAATTGTTAAGTGCTGCAAAATCATTCACCTTAGAAGCATCCTTAGATATCCTTATTGAAGCTTCCAAAAGTACCGAGGGTCGATCGGATTTGGCTTCACAAAATATCCTCCCTTCTGTGCTTGAGTTGATTCAGCGTCTCATTGACACTTCTAGTGGTGCACTTCTCTTATCATCCTTGAAGCTCCTTAGAAACCTATGTGCTGGAGAAATTAGAAATCAGAATGTTTTCATTGAGCAAAGTGGAGTTGGAGTTGTTTCAAGCATTCTGCAGTACGCTATGCTGATGTGTGATCCTGATATCGTGATCATTAGACTAGGATTGCAGGTTCTAGCAAATGTTTCATTGGCTGGAGAAGAGCATCAACAAGCAATTTGGCGTGAACTATTCCCCGACAATTTTGTTTTACTCGCACGGATTCGGTACTGTGAGATTTCTGATCCTTTGAGTATGATTATTTACAATCTATGTAGTAGACACTATGAATTGGTTGCATTGCTTTGTGGTGACTCTGGGTTGCCTATTATTGTAGAGATTACGAGGACTGCATCCTCGGGTAAACTCTTAAATTTGCTTAAATTTTCGTTCTATCTTATATTTTTACATATCTTTGGTATCATCCTTTTTTTTTCTTCACACTCCTGTTTTGTTTTTCTGCAGTTGGTTTTGGTGAAGATTGGGTGAAGTTGCTTCTTTCGAGAATCTGCTTAGAAGAGCCTTATTTTCCTCTGCTTTTTTCTAAGTTATGCCCTGTTGATAATTCTAAAGATGGTGAAAAAGTTGAATCCGAAGATGTTTCATTTTCTTCTGAACAAGCATTTCTTTTGACAATCATATCGGAGATATTGAATGAGCGAATCGGAGATATTACTGTTCCCAATGATTTTGCATCGTGTGTATTTAGAATCTTCCAGAGCTCCCTTTCTATTATCGATTTCACCCCAATATGCAAGTGTAGTCTTCCAACAGGCACAACCGCCGTAGATGTTCTCGGGTACTCACTAGCTATTTTAAGAGATATTTGTGCACAGGATGGTAGACATAAAGATATTTCTGAGGATGCAGTTGATGTGCTTCTCTCTCTTGGACTTCTAGATTTGCTTTTGGGCTTACTTCGCAATGTCGAACCTCCAGCCATGATCAAGAAAGCACTTCAACAAGCCGAGAACGAGGATAGAACTAGTCGCCCTAACTCATTAAAGCGGTGTCCGTATAAAGGGTTTCGAAGAGATATTGTTGCTGTCATTGCAAATTGCTCATACAGAAGGAAGCATGTACAAGATGACATTAGAAAGAAGAATGGAGTGTTTGTGCTGTTGCAGCAGTGTGTTGCTGATGAGAACAACCCATTCCTGAGGGAATGGGGCATCTGGGCTATGAGGAACTTACTTGAAGGAAACTTAGAAAACCAAAAATTAGTAGCTGAACTAGAAGTTCAAGGTTCTGTAGATGTGCCCGAGATTGCTGAACTTGGTCTTCAAATTGAGGTGGATCCAAAAACTCGACGTGCTAAGCTTGTAAATGGCTCG

mRNA sequence

ATGAAGAATCCATCATTATCTGAGCAATCTATACCTGAAAGAATTATTCAGCAATTGTTAAGTGCTGCAAAATCATTCACCTTAGAAGCATCCTTAGATATCCTTATTGAAGCTTCCAAAAGTACCGAGGGTCGATCGGATTTGGCTTCACAAAATATCCTCCCTTCTGTGCTTGAGTTGATTCAGCGTCTCATTGACACTTCTAGTGGTGCACTTCTCTTATCATCCTTGAAGCTCCTTAGAAACCTATGTGCTGGAGAAATTAGAAATCAGAATGTTTTCATTGAGCAAAGTGGAGTTGGAGTTGTTTCAAGCATTCTGCAGTACGCTATGCTGATGTGTGATCCTGATATCGTGATCATTAGACTAGGATTGCAGGTTCTAGCAAATGTTTCATTGGCTGGAGAAGAGCATCAACAAGCAATTTGGCGTGAACTATTCCCCGACAATTTTGTTTTACTCGCACGGATTCGGTACTGTGAGATTTCTGATCCTTTGAGTATGATTATTTACAATCTATGTAGTAGACACTATGAATTGGTTGCATTGCTTTGTGGTGACTCTGGGTTGCCTATTATTGTAGAGATTACGAGGACTGCATCCTCGGTTGGTTTTGGTGAAGATTGGGTGAAGTTGCTTCTTTCGAGAATCTGCTTAGAAGAGCCTTATTTTCCTCTGCTTTTTTCTAAGTTATGCCCTGTTGATAATTCTAAAGATGGTGAAAAAGTTGAATCCGAAGATGTTTCATTTTCTTCTGAACAAGCATTTCTTTTGACAATCATATCGGAGATATTGAATGAGCGAATCGGAGATATTACTGTTCCCAATGATTTTGCATCGTGTGTATTTAGAATCTTCCAGAGCTCCCTTTCTATTATCGATTTCACCCCAATATGCAAGTGTAGTCTTCCAACAGGCACAACCGCCGTAGATGTTCTCGGGTACTCACTAGCTATTTTAAGAGATATTTGTGCACAGGATGGTAGACATAAAGATATTTCTGAGGATGCAGTTGATGTGCTTCTCTCTCTTGGACTTCTAGATTTGCTTTTGGGCTTACTTCGCAATGTCGAACCTCCAGCCATGATCAAGAAAGCACTTCAACAAGCCGAGAACGAGGATAGAACTAGTCGCCCTAACTCATTAAAGCGGTGTCCGTATAAAGGGTTTCGAAGAGATATTGTTGCTGTCATTGCAAATTGCTCATACAGAAGGAAGCATGTACAAGATGACATTAGAAAGAAGAATGGAGTGTTTGTGCTGTTGCAGCAGTGTGTTGCTGATGAGAACAACCCATTCCTGAGGGAATGGGGCATCTGGGCTATGAGGAACTTACTTGAAGGAAACTTAGAAAACCAAAAATTAGTAGCTGAACTAGAAGTTCAAGGTTCTGTAGATGTGCCCGAGATTGCTGAACTTGGTCTTCAAATTGAGGTGGATCCAAAAACTCGACGTGCTAAGCTTGTAAATGGCTCG

Coding sequence (CDS)

ATGAAGAATCCATCATTATCTGAGCAATCTATACCTGAAAGAATTATTCAGCAATTGTTAAGTGCTGCAAAATCATTCACCTTAGAAGCATCCTTAGATATCCTTATTGAAGCTTCCAAAAGTACCGAGGGTCGATCGGATTTGGCTTCACAAAATATCCTCCCTTCTGTGCTTGAGTTGATTCAGCGTCTCATTGACACTTCTAGTGGTGCACTTCTCTTATCATCCTTGAAGCTCCTTAGAAACCTATGTGCTGGAGAAATTAGAAATCAGAATGTTTTCATTGAGCAAAGTGGAGTTGGAGTTGTTTCAAGCATTCTGCAGTACGCTATGCTGATGTGTGATCCTGATATCGTGATCATTAGACTAGGATTGCAGGTTCTAGCAAATGTTTCATTGGCTGGAGAAGAGCATCAACAAGCAATTTGGCGTGAACTATTCCCCGACAATTTTGTTTTACTCGCACGGATTCGGTACTGTGAGATTTCTGATCCTTTGAGTATGATTATTTACAATCTATGTAGTAGACACTATGAATTGGTTGCATTGCTTTGTGGTGACTCTGGGTTGCCTATTATTGTAGAGATTACGAGGACTGCATCCTCGGTTGGTTTTGGTGAAGATTGGGTGAAGTTGCTTCTTTCGAGAATCTGCTTAGAAGAGCCTTATTTTCCTCTGCTTTTTTCTAAGTTATGCCCTGTTGATAATTCTAAAGATGGTGAAAAAGTTGAATCCGAAGATGTTTCATTTTCTTCTGAACAAGCATTTCTTTTGACAATCATATCGGAGATATTGAATGAGCGAATCGGAGATATTACTGTTCCCAATGATTTTGCATCGTGTGTATTTAGAATCTTCCAGAGCTCCCTTTCTATTATCGATTTCACCCCAATATGCAAGTGTAGTCTTCCAACAGGCACAACCGCCGTAGATGTTCTCGGGTACTCACTAGCTATTTTAAGAGATATTTGTGCACAGGATGGTAGACATAAAGATATTTCTGAGGATGCAGTTGATGTGCTTCTCTCTCTTGGACTTCTAGATTTGCTTTTGGGCTTACTTCGCAATGTCGAACCTCCAGCCATGATCAAGAAAGCACTTCAACAAGCCGAGAACGAGGATAGAACTAGTCGCCCTAACTCATTAAAGCGGTGTCCGTATAAAGGGTTTCGAAGAGATATTGTTGCTGTCATTGCAAATTGCTCATACAGAAGGAAGCATGTACAAGATGACATTAGAAAGAAGAATGGAGTGTTTGTGCTGTTGCAGCAGTGTGTTGCTGATGAGAACAACCCATTCCTGAGGGAATGGGGCATCTGGGCTATGAGGAACTTACTTGAAGGAAACTTAGAAAACCAAAAATTAGTAGCTGAACTAGAAGTTCAAGGTTCTGTAGATGTGCCCGAGATTGCTGAACTTGGTCTTCAAATTGAGGTGGATCCAAAAACTCGACGTGCTAAGCTTGTAAATGGCTCG

Protein sequence

MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLELIQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVIIRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYELVALLCGDSGLPIIVEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDGEKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICKCSLPTGTTAVDVLGYSLAILRDICAQDGRHKDISEDAVDVLLSLGLLDLLLGLLRNVEPPAMIKKALQQAENEDRTSRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFVLLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIEVDPKTRRAKLVNGS

Homology

[Close]

BLAST of MS003344.1 vs. NCBI nr
Match: XP_022134088.1 (ataxin-10 isoform X1 [Momordica charantia] >XP_022134089.1 ataxin-10 isoform X1 [Momordica charantia])

HSP 1 Score: 951.8 bits (2459), Expect = 2.3e-273
Identity = 490/492 (99.59%), Postives = 491/492 (99.80%), Query Frame = 0


Query: 1   MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL 60
           MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL
Sbjct: 1   MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL 60

Query: 61  IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI 120
           IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI
Sbjct: 61  IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYEL 180
           IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYEL
Sbjct: 121 IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYEL 180

Query: 181 VALLCGDSGLPIIVEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG 240
           VALLCGDSGLPIIVEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG
Sbjct: 181 VALLCGDSGLPIIVEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG 240

Query: 241 EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK 300
           EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK
Sbjct: 241 EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK 300

Query: 301 CSLPTGTTAVDVLGYSLAILRDICAQDGRHKDISEDAVDVLLSLGLLDLLLGLLRNVEPP 360
           CSLPTGTTAVDVLGYSLAILRDICAQDGRHKDISEDAVDVLLSLGLLDLLLGLLRNVEPP
Sbjct: 301 CSLPTGTTAVDVLGYSLAILRDICAQDGRHKDISEDAVDVLLSLGLLDLLLGLLRNVEPP 360

Query: 361 AMIKKALQQAENEDRTSRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFV 420
           AMIKKALQQAENEDR+SRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFV
Sbjct: 361 AMIKKALQQAENEDRSSRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFV 420

Query: 421 LLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIEVD 480
           LLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIEVD
Sbjct: 421 LLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIEVD 480

Query: 481 PKTRRAKLVNGS 493
           PKTRRAKLVN S
Sbjct: 481 PKTRRAKLVNAS 492

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BLAST of MS003344.1 vs. NCBI nr
Match: XP_022134090.1 (ataxin-10 isoform X2 [Momordica charantia])

HSP 1 Score: 843.2 bits (2177), Expect = 1.1e-240
Identity = 446/492 (90.65%), Postives = 447/492 (90.85%), Query Frame = 0


Query: 1   MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL 60
           MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL
Sbjct: 1   MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL 60

Query: 61  IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI 120
           IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI
Sbjct: 61  IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYEL 180
           IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRY                     
Sbjct: 121 IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRY--------------------- 180

Query: 181 VALLCGDSGLPIIVEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG 240
                                  GFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG
Sbjct: 181 ----------------------FGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG 240

Query: 241 EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK 300
           EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK
Sbjct: 241 EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK 300

Query: 301 CSLPTGTTAVDVLGYSLAILRDICAQDGRHKDISEDAVDVLLSLGLLDLLLGLLRNVEPP 360
           CSLPTGTTAVDVLGYSLAILRDICAQDGRHKDISEDAVDVLLSLGLLDLLLGLLRNVEPP
Sbjct: 301 CSLPTGTTAVDVLGYSLAILRDICAQDGRHKDISEDAVDVLLSLGLLDLLLGLLRNVEPP 360

Query: 361 AMIKKALQQAENEDRTSRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFV 420
           AMIKKALQQAENEDR+SRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFV
Sbjct: 361 AMIKKALQQAENEDRSSRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFV 420

Query: 421 LLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIEVD 480
           LLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIEVD
Sbjct: 421 LLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIEVD 449

Query: 481 PKTRRAKLVNGS 493
           PKTRRAKLVN S
Sbjct: 481 PKTRRAKLVNAS 449

[Close]

BLAST of MS003344.1 vs. NCBI nr
Match: XP_038888252.1 (ataxin-10 [Benincasa hispida] >XP_038888253.1 ataxin-10 [Benincasa hispida])

HSP 1 Score: 774.6 bits (1999), Expect = 5.0e-220
Identity = 403/492 (81.91%), Postives = 433/492 (88.01%), Query Frame = 0


Query: 1   MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL 60
           MKN    EQSIPERI Q+L  A+ S TLEASL+ LIEASKS EGRS+LASQ+ILP VLEL
Sbjct: 1   MKNSPSLEQSIPERITQRLFIASNSCTLEASLETLIEASKSIEGRSNLASQDILPCVLEL 60

Query: 61  IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI 120
           IQ +I+ S   LLLSSLKLLRNLCAGEIRNQNVFIEQ+GVGVVS +LQ AMLM DPD VI
Sbjct: 61  IQCVINISGDVLLLSSLKLLRNLCAGEIRNQNVFIEQNGVGVVSRVLQDAMLMNDPDHVI 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYEL 180
           IRLGLQVLANVSLAGEEHQQAIW  LFPD F+LL+RI Y EISDPLSMIIYN+CSRH EL
Sbjct: 121 IRLGLQVLANVSLAGEEHQQAIWHRLFPDKFLLLSRITYHEISDPLSMIIYNICSRHSEL 180

Query: 181 VALLCGDSGLPIIVEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG 240
           VA LCGDSGLPII EI RT SSVGF EDWVKLLLSRICLEEPYFP LFSKL P+D  KD 
Sbjct: 181 VASLCGDSGLPIIEEIVRTVSSVGFVEDWVKLLLSRICLEEPYFPRLFSKLRPIDTYKDS 240

Query: 241 EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK 300
            K E  DVSFSSEQA+LLTIISEILNE+IGDI VP DFA+CV+RIFQSS+SIID TPICK
Sbjct: 241 NKAEYRDVSFSSEQAYLLTIISEILNEQIGDIVVPKDFAACVYRIFQSSISIIDSTPICK 300

Query: 301 CSLPTGTTAVDVLGYSLAILRDICAQDGR--HKDISEDAVDVLLSLGLLDLLLGLLRNVE 360
             LPTGT A DVLGYSL ILRDICAQD +   KD+SEDAVDVLLSLGL+DLLLG+L ++E
Sbjct: 301 SGLPTGTIAGDVLGYSLTILRDICAQDSKKGDKDVSEDAVDVLLSLGLIDLLLGILHDIE 360

Query: 361 PPAMIKKALQQAENEDRTSRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGV 420
           PPA++KKALQQ ENEDRTS PNSLK CPYKGFRRDIVAVIANC YRRKHVQDDIRKKNGV
Sbjct: 361 PPAVLKKALQQGENEDRTSLPNSLKACPYKGFRRDIVAVIANCLYRRKHVQDDIRKKNGV 420

Query: 421 FVLLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIE 480
           FVLLQQCVADENNPFLREWGIWA+RNLLEGNLENQKLV+ELEVQGS DVPEIAELGL++E
Sbjct: 421 FVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELGLRVE 480

Query: 481 VDPKTRRAKLVN 491
           VDPKTRRAKLVN
Sbjct: 481 VDPKTRRAKLVN 492

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BLAST of MS003344.1 vs. NCBI nr
Match: XP_022947319.1 (ataxin-10 [Cucurbita moschata] >XP_022947320.1 ataxin-10 [Cucurbita moschata] >KAG7035150.1 Ataxin-10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 753.1 bits (1943), Expect = 1.6e-213
Identity = 396/498 (79.52%), Postives = 434/498 (87.15%), Query Frame = 0


Query: 1   MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL 60
           MKN +  EQSIPERIIQ LLSA+ S TLEASL+ LIEASKS EGRS+ ASQNILP VLEL
Sbjct: 1   MKNSASFEQSIPERIIQPLLSASNSCTLEASLEALIEASKSVEGRSNFASQNILPCVLEL 60

Query: 61  IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI 120
           IQ L  TS+ AL LSSL+LLRNLCAGEIRNQNVFIEQ+GVGVV SILQ AML+ DPD VI
Sbjct: 61  IQCLDYTSNNALQLSSLRLLRNLCAGEIRNQNVFIEQNGVGVVLSILQNAMLLFDPDRVI 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYEL 180
           IRLGLQVLANVSLAGEEHQQAIW  LFPD FV LARIRYCEISDPLSMI+YNLCS + EL
Sbjct: 121 IRLGLQVLANVSLAGEEHQQAIWHGLFPDKFVSLARIRYCEISDPLSMILYNLCSTNSEL 180

Query: 181 VALLCGDSGLPIIVEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG 240
           VA LC D GLPI+ EITRT + VGF EDWVKLLLSRICLEEPYFP LFS L P+D SKDG
Sbjct: 181 VASLCSDVGLPILEEITRTTTLVGFKEDWVKLLLSRICLEEPYFPRLFSALRPIDTSKDG 240

Query: 241 EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK 300
            K    D+SFSSEQAFLLTIISEILNERIGDI++P DFASC+ RIFQSS+ II  TPIC+
Sbjct: 241 GK----DMSFSSEQAFLLTIISEILNERIGDISIPKDFASCIHRIFQSSIPIISSTPICE 300

Query: 301 CSLPTGTTAVDVLGYSLAILRDICAQ----DGRHKDISEDAVDVLLSLGLLDLLLGLLRN 360
            SLPTGTTAVDVLGYSL ILRDICAQ    +G HKD+S+DAVDVLLSLGL+DLLLG+LR+
Sbjct: 301 RSLPTGTTAVDVLGYSLNILRDICAQEDGKEGGHKDVSKDAVDVLLSLGLIDLLLGILRD 360

Query: 361 VEPPAMIKKALQQAENEDRTSRPNSLKR--CPYKGFRRDIVAVIANCSYRRKHVQDDIRK 420
           +EPPA++KKA+QQAENE+RT  PN+ K   CPYKGFRRDIVAVIANC YR+KHVQDDIRK
Sbjct: 361 IEPPAIVKKAIQQAENENRTDLPNTSKSCPCPYKGFRRDIVAVIANCLYRKKHVQDDIRK 420

Query: 421 KNGVFVLLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELG 480
           KNGVFVLLQQCV DENNPFLREWGIWA+RNLLEGNLEN+KLVAELEVQG V++PEIAELG
Sbjct: 421 KNGVFVLLQQCVVDENNPFLREWGIWAVRNLLEGNLENKKLVAELEVQGPVNMPEIAELG 480

Query: 481 LQIEVDPKTRRAKLVNGS 493
           LQ+EVDPKT+ AKLVN S
Sbjct: 481 LQVEVDPKTKAAKLVNAS 494

[Close]

BLAST of MS003344.1 vs. NCBI nr
Match: XP_023534595.1 (ataxin-10 [Cucurbita pepo subsp. pepo] >XP_023534596.1 ataxin-10 [Cucurbita pepo subsp. pepo] >XP_023534597.1 ataxin-10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 749.6 bits (1934), Expect = 1.7e-212
Identity = 395/498 (79.32%), Postives = 432/498 (86.75%), Query Frame = 0


Query: 1   MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL 60
           MKN +  EQSIPERI Q L SA+ S TLE SL+ LIEASKS EGRS+ ASQNILP VLEL
Sbjct: 1   MKNSASFEQSIPERITQPLFSASNSCTLETSLETLIEASKSVEGRSNFASQNILPCVLEL 60

Query: 61  IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI 120
           IQ L  TS+ AL LS+L+LLRNLCAGEIRNQNVFIEQ+GVGVVSSILQ AML+ DPD VI
Sbjct: 61  IQCLDYTSNNALQLSALRLLRNLCAGEIRNQNVFIEQNGVGVVSSILQNAMLLFDPDRVI 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYEL 180
           IRLGLQVLANVSLAGEEHQQAIWR LFPD FV LARIRYCEISDPLSMI+YNL S + EL
Sbjct: 121 IRLGLQVLANVSLAGEEHQQAIWRGLFPDKFVSLARIRYCEISDPLSMILYNLYSTNTEL 180

Query: 181 VALLCGDSGLPIIVEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG 240
           VA LC D GLPII EITRT S VGF EDWVKLLLSRICLEEPYFP LFS L P+D+SKDG
Sbjct: 181 VASLCSDVGLPIIEEITRTTSLVGFKEDWVKLLLSRICLEEPYFPRLFSALRPIDSSKDG 240

Query: 241 EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK 300
                ED+SFSSEQAFLLTIISEILNERIGDI++P DFASC+ RIFQSS+ II  TPIC+
Sbjct: 241 ----GEDMSFSSEQAFLLTIISEILNERIGDISIPKDFASCIHRIFQSSIPIISSTPICE 300

Query: 301 CSLPTGTTAVDVLGYSLAILRDICAQD----GRHKDISEDAVDVLLSLGLLDLLLGLLRN 360
            SLPTGTTAVDVLGYSL ILRDICAQD    G  KD+SEDAVDVLLSLGL+DLLLG+LR+
Sbjct: 301 RSLPTGTTAVDVLGYSLNILRDICAQDDGKEGERKDVSEDAVDVLLSLGLIDLLLGILRD 360

Query: 361 VEPPAMIKKALQQAENEDRTSRPNSLKR--CPYKGFRRDIVAVIANCSYRRKHVQDDIRK 420
           +EPPA++KKA+QQAENE+RT  PN+ K   CPYKGFRRDIVAVIANC YR+KHVQDDIRK
Sbjct: 361 IEPPAIVKKAIQQAENENRTDLPNTSKSCPCPYKGFRRDIVAVIANCLYRKKHVQDDIRK 420

Query: 421 KNGVFVLLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELG 480
           KNGVFVLLQQCV DENNPFLREWGIWA+RNLLEGN+EN+KLVAELEVQG V++PEIAELG
Sbjct: 421 KNGVFVLLQQCVVDENNPFLREWGIWAVRNLLEGNMENKKLVAELEVQGPVNMPEIAELG 480

Query: 481 LQIEVDPKTRRAKLVNGS 493
           LQ+EVDPKT+ AKLVN S
Sbjct: 481 LQVEVDPKTKAAKLVNAS 494

[Close]

BLAST of MS003344.1 vs. ExPASy Swiss-Prot
Match: Q2TBW0 (Ataxin-10 OS=Bos taurus OX=9913 GN=ATXN10 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 9.1e-23
Identity = 117/461 (25.38%), Postives = 206/461 (44.69%), Query Frame = 0


Query: 32  LDILIEASKSTEGRSDLASQNILPSVLELIQRLIDTSSGALLLSSLKLLRNLCAGEIRNQ 91
           LDIL ++S + E    LA ++  PS +E +      SS  L+    + LRN C     NQ
Sbjct: 51  LDILKKSSHAVE----LACRD--PSQVEHL-----ASSLQLITECFRCLRNACIECSVNQ 110

Query: 92  NVFIEQSGVGV-VSSILQYAMLMCDPD--IVIIRLGLQVLANVSLAGEEHQQAIWRELFP 151
           N       +GV V  IL +  L  + D  +   R GLQ L N++   E+ Q  +W   FP
Sbjct: 111 NSIRNLGTIGVAVDLILLFRELRVEQDSLLTAFRCGLQFLGNIASRNEDSQSVVWMHAFP 170

Query: 152 DNFVLLARIRYCEISDPLSMIIYNLCSRHYELVALLCGDSGLPIIVEITRTASSVGFGED 211
           + F+        +I    SMI++   S + E +  L  +  L I +++          E 
Sbjct: 171 ELFLSCLNHPDRKIVAYSSMILFT--SLNSERMKEL--EENLNIAIDVVEAHQKQPESE- 230

Query: 212 WVKLLLSRICLEEPYFPLLFSKLCPVDNSKDGEKVESEDVSFSSEQAFLLTIISEILNER 271
           W  L+++   L+ P                  E V++     S+++   +T++  ++ + 
Sbjct: 231 WPFLIITDHFLKSP------------------ELVKAMYAKMSNQER--VTLLDLMIAKI 290

Query: 272 IGDITVPNDFASCVFRIFQSSLSIIDFTPICKCSLPTGTTAV----DVLGYSLAILRDIC 331
           +GD  +  D A     +F S   +I  T + +C +    T+     D    +   L D+ 
Sbjct: 291 VGDEPLTKDDAP----VFLSHAELIASTFVDQCKIVLKLTSEQHTDDEEALATIRLLDVL 350

Query: 332 AQDGRHKDISEDAVDVLLSLGLLDLLLGLLRNVEPPAMIKKALQQAENEDRT--SRPNSL 391
            +   + D+          LG L +  GLL  V     + + +  A N+     S   S+
Sbjct: 351 CEKTANTDL----------LGYLQVFPGLLERV---IDLLRLIHVAGNDSTNIFSACASI 410

Query: 392 K-----RCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFVLLQQCVADENNPFLREW 451
           K         +GF+  ++ +I N  Y+ K  QD + + +G+ ++L  C  D++NPFL +W
Sbjct: 411 KADGDVSSVAEGFKSHLIRLIGNLCYKNKDNQDKVNELDGIPLILDSCGLDDSNPFLTQW 458

Query: 452 GIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIE 479
            ++A+RNL E N +NQ L+A++E QG  D   + ++G ++E
Sbjct: 471 VVYAIRNLTEDNSQNQDLIAKMEEQGLADASLLKKMGFEVE 458

[Close]

BLAST of MS003344.1 vs. ExPASy Swiss-Prot
Match: Q5FVB0 (Ataxin-10 OS=Xenopus tropicalis OX=8364 GN=atxn10 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.1e-20
Identity = 102/406 (25.12%), Postives = 182/406 (44.83%), Query Frame = 0


Query: 78  KLLRNLCAGEIRNQ----NVFIEQSGVGVVSSILQYAMLMCDPDIVIIRLGLQVLANVSL 137
           + LRN C     NQ    NV + +  V ++  I     ++ +P +V  R GLQ L N + 
Sbjct: 94  RCLRNACVQCASNQDSVRNVGLIEESVRLI-QIFGAPHVLQEPALVAFRCGLQFLGNTAA 153

Query: 138 AGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYELVALLCGDSGLPII 197
              + Q A+W   FPD F+        ++    SM+++   +R  E V+ L   S L + 
Sbjct: 154 GNRDSQNAVWACAFPDLFLSCLVHDDEKVVTYSSMVLFTCINR--EKVSTLQDPSKLDVA 213

Query: 198 VEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDGEKVESEDVSFSS- 257
           + +  TA S     +W+ L++    L           LCP       + V++  +S SS 
Sbjct: 214 LSVV-TAYSKYPDAEWMYLIVMDHFL-----------LCP-------DLVKAVYLSQSSP 273

Query: 258 EQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICKCSLPTGTTAVDV 317
           E+  LL +I   ++++   ++     A      F S         I K + P+     + 
Sbjct: 274 ERVTLLELILGKISQK-EPLSAEESEALQAIAAFLSDCFQTQCKTILKLTSPSACDEEEP 333

Query: 318 LGYSLAILRDICAQDGRHKDISEDAVDVLLSLGLLDLLLGLLRNVEPPAMIKKALQQAEN 377
           +  +  +L  +C    +++ +S     +    GLL+  + +LR        K+++     
Sbjct: 334 IVVT-RLLDILCEVTSKNEHLS----CLQTCPGLLEAAVDILRLTHLAG--KQSMNVFTA 393

Query: 378 EDRTSRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFVLLQQCVADENNP 437
               S    L      GF+  ++ +I N  Y+ K  Q+ + + +G+ ++L  C  D+NNP
Sbjct: 394 AHTMSMGQDLTHAAV-GFKAHLIRLIGNLCYQNKENQEKVYQLDGIALILDNCSIDDNNP 453

Query: 438 FLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIE 479
           FL +W ++A+RNL E N +NQ+L+A +E QG  D   +  +GLQ E
Sbjct: 454 FLNQWAVFAIRNLTENNDKNQELIASMERQGLADSSLLKSMGLQAE 468

[Close]

BLAST of MS003344.1 vs. ExPASy Swiss-Prot
Match: P28658 (Ataxin-10 OS=Mus musculus OX=10090 GN=Atxn10 PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 7.2e-20
Identity = 114/455 (25.05%), Postives = 201/455 (44.18%), Query Frame = 0


Query: 32  LDILIEASKSTEGRSDLASQNILPSVLELIQRLIDTSSGALLLSSLKLLRNLCAGEIRNQ 91
           LDIL +++ + E    LA ++  PS +E +      SS  L+    + LRN C     NQ
Sbjct: 51  LDILKKSTHAVE----LACRD--PSQVEHL-----ASSLQLITECFRCLRNACIECSVNQ 110

Query: 92  NVFIEQSGVGV-VSSILQYAMLMCDPD--IVIIRLGLQVLANVSLAGEEHQQAIWRELFP 151
           N       +GV V  +L +  L  + D  +   R GLQ L NV+   EE Q  +W   FP
Sbjct: 111 NSIRNLDTIGVAVDLVLLFRELRVEQDSLLTAFRCGLQFLGNVASRNEESQSIVWVHAFP 170

Query: 152 DNFVLLARIRYCEISDPLSMIIYNLCSRHYELVALLCGDSGLPIIVEITRTASSVGFGED 211
           + F+        +I    SMI++   S + E +  L  +  L I + +   A       +
Sbjct: 171 ELFMSCLNHPDKKIVAYCSMILFT--SLNAERMKDL--EENLNIAINVIE-AHQKHPASE 230

Query: 212 WVKLLLSRICLEEPYFPLLFSKLCPVDNSKDGEKVESEDVSFSSEQAFLLTIISEILNER 271
           W  L++S   L+ P                  E VE+     S+++   +T++  ++ + 
Sbjct: 231 WPFLIISDHFLKSP------------------ELVEAMYGKLSNQER--ITLLDIVIAKL 290

Query: 272 IGDITVPNDFASCVFRIFQSSLSIIDFTPICKCSLPTGTTAVDVLGYSLAILRDICAQDG 331
           +G+  +  D  S   R   + L    F   C+  L   +        +L  +R +     
Sbjct: 291 VGEEQLTKDDISIFVR--HAELIANSFMDQCRNVLKLTSEPHTEDKEALVTIRLL----- 350

Query: 332 RHKDISEDAVDVLLSLGLLDLLLGLLRNVEPPAMIKKALQQAENEDRTSRPNSLK----- 391
              D+  +       LG L +  GL+  V     +   + + E+ +  S  +SLK     
Sbjct: 351 ---DVLCEMTSNTELLGYLQVFPGLMERVIDVLRVIHEVGK-ESTNIFSPSDSLKAEGDI 410

Query: 392 RCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFVLLQQCVADENNPFLREWGIWAMR 451
               +GF+  ++ +I N  Y+ K  QD + + +G+ ++L     D+NNPF+ +W ++A+R
Sbjct: 411 EHMTEGFKSHLIRLIGNLCYKNKENQDKVNELDGIPLILDSSNIDDNNPFMMQWVVYAVR 458

Query: 452 NLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIE 479
           NL E N +NQ ++A++E QG  D   + ++G +IE
Sbjct: 471 NLTEDNSQNQDVIAKMEEQGLADASLLKKMGFEIE 458

[Close]

BLAST of MS003344.1 vs. ExPASy Swiss-Prot
Match: Q55EI6 (Ataxin-10 homolog OS=Dictyostelium discoideum OX=44689 GN=atxn10 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.2e-19
Identity = 126/596 (21.14%), Postives = 250/596 (41.95%), Query Frame = 0


Query: 1   MKNPSLSE--QSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVL 60
           MK  S +E  +S+ E + +++ +     T+   +  L   SK  + R ++++++     L
Sbjct: 1   MKVNSTTEIIKSLLECLSKEISNGEDEDTMITDITELFNLSKEFDVRKEISNKH--NEFL 60

Query: 61  ELIQRLIDTSSGA----------LLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQ 120
            ++   I  S+ A            L+S++ LRNLCA    NQN+ I  S    ++ I+ 
Sbjct: 61  NILMNYIIKSTTANGDNNEKLFKFNLTSIRFLRNLCANVSENQNIIISNS--NFINFIIN 120

Query: 121 YAMLMCDPDIVIIRLG--------LQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYC 180
              L+ + + + I L          Q+L N  +  ++ Q  +W  ++P+N ++L   +Y 
Sbjct: 121 --QLINENNNIKITLNKKNILTSLYQLLINGIVLNDKTQSLLWSNIYPNNLIILIE-KYK 180

Query: 181 EISD----PLS-MIIYN-LCSRHYELVALLCGDSGLPIIVEITRTASSVGFGED-----W 240
           +  +    P + M+IYN + +    +  L+C    + +I+E+ +   +     +     W
Sbjct: 181 DNDEFKLLPTNLMLIYNCILNSKDRMKDLVCNKRLVQLIIELIKEDDTFDHEYNTQNFHW 240

Query: 241 VKLLLSRICLEEPYFPLLFS----------KLCPVDNSKDGEKVESEDVSFSS------- 300
           + L+   + + + +  L  S               +++ +    ES D +  S       
Sbjct: 241 IHLISKSLFINDLFIDLYKSLSDNKYSTELVKSTTESTTESTTTESTDSTTDSTTTTTTG 300

Query: 301 ----EQAFLLTIISEILNE----RIGDITVPN---DFASCVFRI---------------- 360
                Q  LL ++  I+++     I +    +   D  +C F I                
Sbjct: 301 KTNKNQVKLLNLLDSIIHDGDKKNIKEYIEKDSIIDLKTCYFMIDELASLYNLDFARKDL 360

Query: 361 ------FQSSLSIIDFTPI---CKCSLPTGTTAVDVLGYSLAILR----DICAQDGRHKD 420
                   +SL+  DF  I    K      +   ++L  SL+I +        Q+G    
Sbjct: 361 KVETQQLTTSLNQSDFDAIFFFIKIFANITSYTEEMLSLSLSIFKPNQIPTKQQEGEEDP 420

Query: 421 IS---------EDAVD-----------VLLSLGLLDLLLGLLRNVEPPAMIKKALQQAEN 480
           ++         + A+D           +L   GL+ + +G L         K +   + +
Sbjct: 421 VNQILNDPFSKDSAIDPSASKKFDLNTLLRKKGLVAICIGSLHGNYGSDTNKSSSSSSSS 480

[Close]

BLAST of MS003344.1 vs. ExPASy Swiss-Prot
Match: Q5RE06 (Ataxin-10 OS=Pongo abelii OX=9601 GN=ATXN10 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.1e-19
Identity = 111/453 (24.50%), Postives = 201/453 (44.37%), Query Frame = 0


Query: 32  LDILIEASKSTEGRSDLASQNILPSVLELIQRLIDTSSGALLLSSLKLLRNLCAGEIRNQ 91
           LDIL ++S + E    LA ++  PS +E +      SS  L+    + LRN C     NQ
Sbjct: 52  LDILKKSSHAVE----LACRD--PSQVENL-----ASSLQLITECFRCLRNACIECSVNQ 111

Query: 92  NVFIEQSGVGV-VSSILQYAMLMCDPD--IVIIRLGLQVLANVSLAGEEHQQAIWRELFP 151
           N       +GV V  IL +  L  + +  +   R GLQ L N++   E+ Q  +W   FP
Sbjct: 112 NSIRNLDAIGVAVDLILLFRELRVEQESLLTAFRCGLQFLGNIASRNEDSQSIVWVHAFP 171

Query: 152 DNFVLLARIRYCEISDPLSMIIYNLCSRHYELVALLCGDSGLPIIVEITRTASSVGFGED 211
           + F+        +I    SMI++   S ++E +  L  +  L I +++   A       +
Sbjct: 172 ELFLSCLNHPDKKIVAYSSMILFT--SLNHERMKEL--EENLNIAIDVI-DAYQKHPESE 231

Query: 212 WVKLLLSRICLEEPYFPLLFSKLCPVDNSKDGEKVESEDVSFSSEQAFLLTIISEILNER 271
           W  L+++ + L+ P    L   + P  N+++                  +T++  ++ + 
Sbjct: 232 WPFLIITDLFLKSPE---LVQAMFPKLNNQE-----------------RVTLLDLMIAKI 291

Query: 272 IGDITVPNDFASCVFRIFQSSLSIIDFTPICKCSLPTGTTAVDVLGYSLAILR--DICAQ 331
             D  +  D      R   + L    F   CK  L   +        +LA +R  D+  +
Sbjct: 292 TSDEPLTKDDIPVFLR--HAELIASTFVDQCKTVLKLASEEPPDDEEALATIRLLDVLCE 351

Query: 332 DGRHKDISEDAVDVL-LSLGLLDLLLGLLRNVEPPAMIKKALQQAENEDRTSRPNSLKRC 391
                 ++ + +  L +  GLL+ ++ LLR +      K+      N         +   
Sbjct: 352 ----MTVNTELLGYLQVFPGLLERVIDLLRVIHVAG--KETTNIFSNCGCVRAEGDISNV 411

Query: 392 PYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFVLLQQCVADENNPFLREWGIWAMRNL 451
             +GF+  ++ +I N  Y+ K  QD + + +G+ ++L  C   ++NPFL +W I+A+RNL
Sbjct: 412 A-EGFKSHLIRLIGNLCYKNKDNQDKVNELDGIPLILDNCNISDSNPFLTQWVIYAIRNL 459

Query: 452 LEGNLENQKLVAELEVQGSVDVPEIAELGLQIE 479
            E N +NQ L+A++E QG  D   + ++G ++E
Sbjct: 472 TEDNSQNQDLIAKMEEQGLADASLLKKVGFEVE 459

[Close]

BLAST of MS003344.1 vs. ExPASy TrEMBL
Match: A0A6J1BXT4 (ataxin-10 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006446 PE=4 SV=1)

HSP 1 Score: 951.8 bits (2459), Expect = 1.1e-273
Identity = 490/492 (99.59%), Postives = 491/492 (99.80%), Query Frame = 0


Query: 1   MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL 60
           MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL
Sbjct: 1   MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL 60

Query: 61  IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI 120
           IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI
Sbjct: 61  IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYEL 180
           IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYEL
Sbjct: 121 IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYEL 180

Query: 181 VALLCGDSGLPIIVEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG 240
           VALLCGDSGLPIIVEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG
Sbjct: 181 VALLCGDSGLPIIVEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG 240

Query: 241 EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK 300
           EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK
Sbjct: 241 EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK 300

Query: 301 CSLPTGTTAVDVLGYSLAILRDICAQDGRHKDISEDAVDVLLSLGLLDLLLGLLRNVEPP 360
           CSLPTGTTAVDVLGYSLAILRDICAQDGRHKDISEDAVDVLLSLGLLDLLLGLLRNVEPP
Sbjct: 301 CSLPTGTTAVDVLGYSLAILRDICAQDGRHKDISEDAVDVLLSLGLLDLLLGLLRNVEPP 360

Query: 361 AMIKKALQQAENEDRTSRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFV 420
           AMIKKALQQAENEDR+SRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFV
Sbjct: 361 AMIKKALQQAENEDRSSRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFV 420

Query: 421 LLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIEVD 480
           LLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIEVD
Sbjct: 421 LLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIEVD 480

Query: 481 PKTRRAKLVNGS 493
           PKTRRAKLVN S
Sbjct: 481 PKTRRAKLVNAS 492

[Close]

BLAST of MS003344.1 vs. ExPASy TrEMBL
Match: A0A6J1BX37 (ataxin-10 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006446 PE=4 SV=1)

HSP 1 Score: 843.2 bits (2177), Expect = 5.5e-241
Identity = 446/492 (90.65%), Postives = 447/492 (90.85%), Query Frame = 0


Query: 1   MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL 60
           MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL
Sbjct: 1   MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL 60

Query: 61  IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI 120
           IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI
Sbjct: 61  IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYEL 180
           IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRY                     
Sbjct: 121 IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRY--------------------- 180

Query: 181 VALLCGDSGLPIIVEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG 240
                                  GFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG
Sbjct: 181 ----------------------FGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG 240

Query: 241 EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK 300
           EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK
Sbjct: 241 EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK 300

Query: 301 CSLPTGTTAVDVLGYSLAILRDICAQDGRHKDISEDAVDVLLSLGLLDLLLGLLRNVEPP 360
           CSLPTGTTAVDVLGYSLAILRDICAQDGRHKDISEDAVDVLLSLGLLDLLLGLLRNVEPP
Sbjct: 301 CSLPTGTTAVDVLGYSLAILRDICAQDGRHKDISEDAVDVLLSLGLLDLLLGLLRNVEPP 360

Query: 361 AMIKKALQQAENEDRTSRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFV 420
           AMIKKALQQAENEDR+SRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFV
Sbjct: 361 AMIKKALQQAENEDRSSRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVFV 420

Query: 421 LLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIEVD 480
           LLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIEVD
Sbjct: 421 LLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIEVD 449

Query: 481 PKTRRAKLVNGS 493
           PKTRRAKLVN S
Sbjct: 481 PKTRRAKLVNAS 449

[Close]

BLAST of MS003344.1 vs. ExPASy TrEMBL
Match: A0A6J1G6J4 (ataxin-10 OS=Cucurbita moschata OX=3662 GN=LOC111451217 PE=4 SV=1)

HSP 1 Score: 753.1 bits (1943), Expect = 7.5e-214
Identity = 396/498 (79.52%), Postives = 434/498 (87.15%), Query Frame = 0


Query: 1   MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL 60
           MKN +  EQSIPERIIQ LLSA+ S TLEASL+ LIEASKS EGRS+ ASQNILP VLEL
Sbjct: 1   MKNSASFEQSIPERIIQPLLSASNSCTLEASLEALIEASKSVEGRSNFASQNILPCVLEL 60

Query: 61  IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI 120
           IQ L  TS+ AL LSSL+LLRNLCAGEIRNQNVFIEQ+GVGVV SILQ AML+ DPD VI
Sbjct: 61  IQCLDYTSNNALQLSSLRLLRNLCAGEIRNQNVFIEQNGVGVVLSILQNAMLLFDPDRVI 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYEL 180
           IRLGLQVLANVSLAGEEHQQAIW  LFPD FV LARIRYCEISDPLSMI+YNLCS + EL
Sbjct: 121 IRLGLQVLANVSLAGEEHQQAIWHGLFPDKFVSLARIRYCEISDPLSMILYNLCSTNSEL 180

Query: 181 VALLCGDSGLPIIVEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG 240
           VA LC D GLPI+ EITRT + VGF EDWVKLLLSRICLEEPYFP LFS L P+D SKDG
Sbjct: 181 VASLCSDVGLPILEEITRTTTLVGFKEDWVKLLLSRICLEEPYFPRLFSALRPIDTSKDG 240

Query: 241 EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK 300
            K    D+SFSSEQAFLLTIISEILNERIGDI++P DFASC+ RIFQSS+ II  TPIC+
Sbjct: 241 GK----DMSFSSEQAFLLTIISEILNERIGDISIPKDFASCIHRIFQSSIPIISSTPICE 300

Query: 301 CSLPTGTTAVDVLGYSLAILRDICAQ----DGRHKDISEDAVDVLLSLGLLDLLLGLLRN 360
            SLPTGTTAVDVLGYSL ILRDICAQ    +G HKD+S+DAVDVLLSLGL+DLLLG+LR+
Sbjct: 301 RSLPTGTTAVDVLGYSLNILRDICAQEDGKEGGHKDVSKDAVDVLLSLGLIDLLLGILRD 360

Query: 361 VEPPAMIKKALQQAENEDRTSRPNSLKR--CPYKGFRRDIVAVIANCSYRRKHVQDDIRK 420
           +EPPA++KKA+QQAENE+RT  PN+ K   CPYKGFRRDIVAVIANC YR+KHVQDDIRK
Sbjct: 361 IEPPAIVKKAIQQAENENRTDLPNTSKSCPCPYKGFRRDIVAVIANCLYRKKHVQDDIRK 420

Query: 421 KNGVFVLLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELG 480
           KNGVFVLLQQCV DENNPFLREWGIWA+RNLLEGNLEN+KLVAELEVQG V++PEIAELG
Sbjct: 421 KNGVFVLLQQCVVDENNPFLREWGIWAVRNLLEGNLENKKLVAELEVQGPVNMPEIAELG 480

Query: 481 LQIEVDPKTRRAKLVNGS 493
           LQ+EVDPKT+ AKLVN S
Sbjct: 481 LQVEVDPKTKAAKLVNAS 494

[Close]

BLAST of MS003344.1 vs. ExPASy TrEMBL
Match: A0A5A7T6L8 (Ataxin-10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003690 PE=4 SV=1)

HSP 1 Score: 748.8 bits (1932), Expect = 1.4e-212
Identity = 388/495 (78.38%), Postives = 429/495 (86.67%), Query Frame = 0


Query: 1   MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL 60
           MKN S  E SIP+RIIQ L  A+ S TLEASL+ LIEASKS+EGRS+LASQNILP VLEL
Sbjct: 1   MKNSSPFELSIPKRIIQPLFLASNSNTLEASLETLIEASKSSEGRSNLASQNILPCVLEL 60

Query: 61  IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI 120
           IQ ++ TS   LLLSSLKLLRNLCAGEIRNQN+FIEQ+GVGVVS +LQ AM+M DPD V 
Sbjct: 61  IQCVVYTSGDVLLLSSLKLLRNLCAGEIRNQNIFIEQNGVGVVSKVLQDAMVMNDPDRVT 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYEL 180
           IRLGLQVLANVSLAGE+HQQAIW  LFPD F+LLAR+ +CEISDPLSMI+YN+CS H EL
Sbjct: 121 IRLGLQVLANVSLAGEKHQQAIWHGLFPDKFLLLARLPFCEISDPLSMILYNICSGHSEL 180

Query: 181 VALLCGDSGLPIIVEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG 240
           VA LCGD GLPII EI RT SSVGF EDWVKLLLSRICLEEPYFP+LFS+L P+D  KD 
Sbjct: 181 VASLCGDIGLPIIEEIVRTVSSVGFVEDWVKLLLSRICLEEPYFPMLFSQLRPIDTYKDS 240

Query: 241 EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK 300
            K ES DVSFSSEQA+LLT++SEILNE+IGDI VP DFA CV+R FQSS+SIID TP+ K
Sbjct: 241 NKAESRDVSFSSEQAYLLTVVSEILNEQIGDIVVPKDFAMCVYRTFQSSISIIDSTPVSK 300

Query: 301 CSLPTGTTAVDVLGYSLAILRDICAQDGR--HKDISEDAVDVLLSLGLLDLLLGLLRNVE 360
           CSLPTGT A DVLGYSL ILRDICAQD     KDI EDAVDVLLSLGL+DLLL +L ++E
Sbjct: 301 CSLPTGTIAGDVLGYSLTILRDICAQDSSKGDKDIYEDAVDVLLSLGLIDLLLSILHDIE 360

Query: 361 PPAMIKKALQQAEN-EDRTSRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNG 420
           PPA++KKALQQ EN EDRTS P +LK CPYKGFRRDIVAVIANC YRRKHVQDDIR+KNG
Sbjct: 361 PPAILKKALQQVENEEDRTSLPKALKSCPYKGFRRDIVAVIANCLYRRKHVQDDIRQKNG 420

Query: 421 VFVLLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQI 480
           VFVLLQQCVADENNPFLREWGIWA+RNLLEGNLEN++LV+ELEVQGS  VPEIAELGL++
Sbjct: 421 VFVLLQQCVADENNPFLREWGIWAVRNLLEGNLENKRLVSELEVQGSAHVPEIAELGLRV 480

Query: 481 EVDPKTRRAKLVNGS 493
           EVDPKTRRAKLVN S
Sbjct: 481 EVDPKTRRAKLVNSS 495

[Close]

BLAST of MS003344.1 vs. ExPASy TrEMBL
Match: A0A1S3CPV9 (ataxin-10 OS=Cucumis melo OX=3656 GN=LOC103503465 PE=4 SV=1)

HSP 1 Score: 748.8 bits (1932), Expect = 1.4e-212
Identity = 388/495 (78.38%), Postives = 429/495 (86.67%), Query Frame = 0


Query: 1   MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL 60
           MKN S  E SIP+RIIQ L  A+ S TLEASL+ LIEASKS+EGRS+LASQNILP VLEL
Sbjct: 1   MKNSSPFELSIPKRIIQPLFLASNSNTLEASLETLIEASKSSEGRSNLASQNILPCVLEL 60

Query: 61  IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI 120
           IQ ++ TS   LLLSSLKLLRNLCAGEIRNQN+FIEQ+GVGVVS +LQ AM+M DPD V 
Sbjct: 61  IQCVVYTSGDVLLLSSLKLLRNLCAGEIRNQNIFIEQNGVGVVSKVLQDAMVMNDPDRVT 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYEL 180
           IRLGLQVLANVSLAGE+HQQAIW  LFPD F+LLAR+ +CEISDPLSMI+YN+CS H EL
Sbjct: 121 IRLGLQVLANVSLAGEKHQQAIWHGLFPDKFLLLARLPFCEISDPLSMILYNICSGHSEL 180

Query: 181 VALLCGDSGLPIIVEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG 240
           VA LCGD GLPII EI RT SSVGF EDWVKLLLSRICLEEPYFP+LFS+L P+D  KD 
Sbjct: 181 VASLCGDIGLPIIEEIVRTVSSVGFVEDWVKLLLSRICLEEPYFPMLFSQLRPIDTYKDS 240

Query: 241 EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK 300
            K ES DVSFSSEQA+LLT++SEILNE+IGDI VP DFA CV+R FQSS+SIID TP+ K
Sbjct: 241 NKAESRDVSFSSEQAYLLTVVSEILNEQIGDIVVPKDFAMCVYRTFQSSISIIDSTPVSK 300

Query: 301 CSLPTGTTAVDVLGYSLAILRDICAQDGR--HKDISEDAVDVLLSLGLLDLLLGLLRNVE 360
           CSLPTGT A DVLGYSL ILRDICAQD     KDI EDAVDVLLSLGL+DLLL +L ++E
Sbjct: 301 CSLPTGTIAGDVLGYSLTILRDICAQDSSKGDKDIYEDAVDVLLSLGLIDLLLSILHDIE 360

Query: 361 PPAMIKKALQQAEN-EDRTSRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNG 420
           PPA++KKALQQ EN EDRTS P +LK CPYKGFRRDIVAVIANC YRRKHVQDDIR+KNG
Sbjct: 361 PPAILKKALQQVENEEDRTSLPKALKSCPYKGFRRDIVAVIANCLYRRKHVQDDIRQKNG 420

Query: 421 VFVLLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQI 480
           VFVLLQQCVADENNPFLREWGIWA+RNLLEGNLEN++LV+ELEVQGS  VPEIAELGL++
Sbjct: 421 VFVLLQQCVADENNPFLREWGIWAVRNLLEGNLENKRLVSELEVQGSAHVPEIAELGLRV 480

Query: 481 EVDPKTRRAKLVNGS 493
           EVDPKTRRAKLVN S
Sbjct: 481 EVDPKTRRAKLVNSS 495

[Close]

BLAST of MS003344.1 vs. TAIR 10
Match: AT4G00231.1 (ARM repeat superfamily protein )

HSP 1 Score: 473.8 bits (1218), Expect = 1.7e-133
Identity = 254/491 (51.73%), Postives = 345/491 (70.26%), Query Frame = 0


Query: 8   EQSIPERIIQQLLSAAK-SFTLEASLDILIEASKSTEGRSDLASQNILPSVLELIQRLID 67
           E S+PE ++Q LL A+  S++LE  L  L+E+SK+  GRSDLAS++ILPS+L L+Q L  
Sbjct: 2   EASLPEEVLQPLLHASDLSYSLEDCLKFLLESSKTDSGRSDLASKSILPSILRLLQLLPY 61

Query: 68  TSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVIIRLGLQ 127
            SS   L  SLK+LRNLCAGE+ NQN F++  G  +VS +L  A+     D   +R GLQ
Sbjct: 62  PSSRHYLNLSLKVLRNLCAGEVSNQNSFVDHDGSAIVSDLLDSAI----ADFETVRFGLQ 121

Query: 128 VLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYELVALLCG 187
           VLANV L GE+ Q+ +W   +P+ F+ +A+IR  E  DPL MI+Y       E+ + LC 
Sbjct: 122 VLANVVLFGEKRQRDVWLRFYPERFLSIAKIRKRETFDPLCMILYTCVDGSSEIASELCS 181

Query: 188 DSGLPIIVEITRTASSVGFGED-WVKLLLSRICLEEPYFPLLFSKLCPVDNSKDGEKVES 247
             GL II E  RT+SSVG  ED W+KLL+SRIC+E+ YF  LFSKL            ++
Sbjct: 182 CQGLTIIAETLRTSSSVGSVEDYWLKLLVSRICVEDGYFLKLFSKLYE----------DA 241

Query: 248 EDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICKCSLPT 307
           E+  FSSEQAFL+ ++S+I NERIG +++P D A  +  +F+ S+ + DF    +  LPT
Sbjct: 242 ENEIFSSEQAFLVRMVSDIANERIGKVSIPKDTACSILGLFRQSVDVFDFVSGERSELPT 301

Query: 308 GTTAVDVLGYSLAILRDICAQDGRHKDISE------DAVDVLLSLGLLDLLLGLLRNVEP 367
           G+T VDV+GYSL I+RD CA  GR +++ E      D V++LLS GL++LLL LL  ++P
Sbjct: 302 GSTIVDVMGYSLVIIRDACA-GGRLEELKEDNKDSGDTVELLLSSGLIELLLDLLSKLDP 361

Query: 368 PAMIKKALQQAENEDRTSRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGVF 427
           P  IKKAL    N+  +S  +SLK CPY+GFRRDIV+VI NC+YRRK VQD+IR+++G+F
Sbjct: 362 PTTIKKAL----NQSPSSSSSSLKPCPYRGFRRDIVSVIGNCAYRRKEVQDEIRERDGLF 421

Query: 428 VLLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIEV 487
           ++LQQCV D+ NPFLREWG+W +RNLLEGN ENQ++VAELE++GSVDVP++ E+GL++E+
Sbjct: 422 LMLQQCVTDDENPFLREWGLWCIRNLLEGNPENQEVVAELEIKGSVDVPQLREIGLRVEI 473

Query: 488 DPKTRRAKLVN 491
           DPKT R KLVN
Sbjct: 482 DPKTARPKLVN 473

The following BLAST results are available for this feature:

BLAST of MS003344.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134088.1	2.3e-273	99.59	ataxin-10 isoform X1 [Momordica charantia] >XP_022134089.1 ataxin-10 isoform X1 ...	[more]
XP_022134090.1	1.1e-240	90.65	ataxin-10 isoform X2 [Momordica charantia]	[more]
XP_038888252.1	5.0e-220	81.91	ataxin-10 [Benincasa hispida] >XP_038888253.1 ataxin-10 [Benincasa hispida]	[more]
XP_022947319.1	1.6e-213	79.52	ataxin-10 [Cucurbita moschata] >XP_022947320.1 ataxin-10 [Cucurbita moschata] >K...	[more]
XP_023534595.1	1.7e-212	79.32	ataxin-10 [Cucurbita pepo subsp. pepo] >XP_023534596.1 ataxin-10 [Cucurbita pepo...	[more]

BLAST of MS003344.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2TBW0	9.1e-23	25.38	Ataxin-10 OS=Bos taurus OX=9913 GN=ATXN10 PE=2 SV=1	[more]
Q5FVB0	1.1e-20	25.12	Ataxin-10 OS=Xenopus tropicalis OX=8364 GN=atxn10 PE=2 SV=1	[more]
P28658	7.2e-20	25.05	Ataxin-10 OS=Mus musculus OX=10090 GN=Atxn10 PE=1 SV=2	[more]
Q55EI6	1.2e-19	21.14	Ataxin-10 homolog OS=Dictyostelium discoideum OX=44689 GN=atxn10 PE=3 SV=1	[more]
Q5RE06	2.1e-19	24.50	Ataxin-10 OS=Pongo abelii OX=9601 GN=ATXN10 PE=2 SV=1	[more]

BLAST of MS003344.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BXT4	1.1e-273	99.59	ataxin-10 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006446 PE=4 SV=1	[more]
A0A6J1BX37	5.5e-241	90.65	ataxin-10 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006446 PE=4 SV=1	[more]
A0A6J1G6J4	7.5e-214	79.52	ataxin-10 OS=Cucurbita moschata OX=3662 GN=LOC111451217 PE=4 SV=1	[more]
A0A5A7T6L8	1.4e-212	78.38	Ataxin-10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003690 PE=...	[more]
A0A1S3CPV9	1.4e-212	78.38	ataxin-10 OS=Cucumis melo OX=3656 GN=LOC103503465 PE=4 SV=1	[more]

BLAST of MS003344.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00231.1	1.7e-133	51.73	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 2..242 e-value: 2.0E-12 score: 48.4
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 295..473 e-value: 1.4E-8 score: 35.7
IPR019156	Ataxin-10 domain	PFAM	PF09759	Atx10homo_assoc	coord: 390..484 e-value: 2.7E-33 score: 113.9
None	No IPR available	PANTHER	PTHR13255	ATAXIN-10	coord: 17..491
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 15..458

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS003344	MS003344	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS003344.1-cds	MS003344.1-cds-scaffold234:2246712..2247580	CDS
MS003344.1-cds	MS003344.1-cds-scaffold234:2247685..2248291	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS003344.1	MS003344.1-protein	polypeptide