MS002857.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS002857.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NDR1/HIN1-like protein 1
Location	scaffold359: 238118 .. 240056 (-)
Sequence length	639
RNA-Seq Expression	MS002857.1
Synteny	MS002857.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGTAAAGGACTGCGACCACCACCACCACCATTGCGATCGTCACCGTCTCTACCGCCGCATAGCCTGCGCCATCTTCACCGTCGTCCTCCTCGTCGGAGTCGTGATCTTCCTCATATGGGCCATCCTCCGCCCGTCCAAGCCGCGCCTCATCCTCCAAGACGTCACTGTCTTCGCCCTCAACGTCTCCGCCGTCCCGCCGATCACCATCTCCGCCACGATGCAGATCACCGTCTCGTCCCGCAACCCTAACAGCCGCATTGGCGTTTACTACCAGAAAATGGATGTCTACGCCGCCTACCGCGGCCAGCAGGTCACGCTCCCCACCGTGCTGCCGCCGACGTACCAAGGCCATAACGACGTCGTTGTTTGGTCCCCGTTCTTGTATGGCGACGCCGTGCCGGTGTCGCCGGAGTTTGCAGGGGCTTTGAGCGAGGATAACAATGTTGGAGCCATGCTGTTCAATATCAAAGTCAATGGGCAGGTAGTTGAATCACCCTTAATCCAAATGTTTATTCAATTTCAATGTCATTTTGGTCCTAAATTTTTAAGGTCTTTCTTTAAAAAATTTTATTTTAATCTTTGACATTTAAAATATGTACTCTAATTCATGAATTTTGAACTACATTTTATTTCTGGTGTTAAGAATTTTCAAAATATCTTATTGTGATTCTCTAAAATTTTAAATAAGACAATAATTAATTAGTCCTTTTAATTTGTTGACGTGAATACGTATTGTTATTTTATTATTAATTTTTTTTAGTACAACACGATGAGGATGGGGATCAAACTTACAAACTTTTAGTTGGAGAGAAATATATACTACTTGAATCATAAAAAATAGTTGAGATAAGTATTAAATGGATAAATTTTGAATAAAAAATAATAAGAAAAACAAAAATAATTAATTGTGTAAGAATTTTAAATTAGAGATTTAAAAAATTAACTAAAAAGATTAGAAAGACTAAAATAAATATTTTAGAAGTTAAAAAAGGGAGGGTCTTGAAAATCAAAATTAGAAGATAAAAAATGAAGGGTCTTGAAACTTTCCAACCAAAACTAGATTATTTGAACCTTTTTTTCCCCTTAGATTACAGTAATTTAATATTTCTATTTATATTGTTAACACCTCTCCTAATAATACTTACATGCTTATTGGGTACTCTTTAATTTTTTCAAAAACAAATAAGTTATCCAATTTTTTTTTTATCTCTTCTACTCGTCAAAATTTAACTGTATGTAAAATTGGTCAACAACACCTAAGTATTATTCCACTTCAGACGTGAAAACTAGCACAAAGTTAAACCAAACGATAATCAATATTAAATTTTAAATTAAAATATCGCTTTGATCTATTTTGGTCGTTATACTTTCAAAATATTTATCTTGATCATTGAACTTTGGTTCATTTGAAATCCGTGTCAAATATTCATTATGGTCCACGTATTTTTAAAAAGTAGTCATTTTTGTTTATAATCTCATTTTTTTTTATCATAGTTTCAACCCAACATCATACTCAATACGTTTTTTGAATTGTAACCCTGACTATATACTAAAGGATTTTCTTTATGTATAAAACCTGTACTAAAAATTTTACAAATAGAGACCAACATAATCACTTTTTAAAAAGTATCGAGATTAAAATAAACATTTTAAAAATACAAGAATTAAAATAAACTATAATTGAAATTACATCAACCAAATAAAATAGTATTTAATTAATCTAAAATTTGAAGGAAAATTTTAATTATTATTTTGTTTTTAAAATTTACATTGTTATTGGACAGGTTCGGTGGAAGGTTGGGAGCTGGATCTCCGGGAGATATCGGCTGAACGCGAACTGTCCGGCGTACATAAGGTTCGGCGACCCGAAGCAAGGGATCGCCTTCGGACCGGCCATGAAGTTTCAGTTCGTTCAAGCTTGTTATGTCGACATT

mRNA sequence

ATGACGGTAAAGGACTGCGACCACCACCACCACCATTGCGATCGTCACCGTCTCTACCGCCGCATAGCCTGCGCCATCTTCACCGTCGTCCTCCTCGTCGGAGTCGTGATCTTCCTCATATGGGCCATCCTCCGCCCGTCCAAGCCGCGCCTCATCCTCCAAGACGTCACTGTCTTCGCCCTCAACGTCTCCGCCGTCCCGCCGATCACCATCTCCGCCACGATGCAGATCACCGTCTCGTCCCGCAACCCTAACAGCCGCATTGGCGTTTACTACCAGAAAATGGATGTCTACGCCGCCTACCGCGGCCAGCAGGTCACGCTCCCCACCGTGCTGCCGCCGACGTACCAAGGCCATAACGACGTCGTTGTTTGGTCCCCGTTCTTGTATGGCGACGCCGTGCCGGTGTCGCCGGAGTTTGCAGGGGCTTTGAGCGAGGATAACAATGTTGGAGCCATGCTGTTCAATATCAAAGTCAATGGGCAGGTAGTTCGGTGGAAGGTTGGGAGCTGGATCTCCGGGAGATATCGGCTGAACGCGAACTGTCCGGCGTACATAAGGTTCGGCGACCCGAAGCAAGGGATCGCCTTCGGACCGGCCATGAAGTTTCAGTTCGTTCAAGCTTGTTATGTCGACATT

Coding sequence (CDS)

ATGACGGTAAAGGACTGCGACCACCACCACCACCATTGCGATCGTCACCGTCTCTACCGCCGCATAGCCTGCGCCATCTTCACCGTCGTCCTCCTCGTCGGAGTCGTGATCTTCCTCATATGGGCCATCCTCCGCCCGTCCAAGCCGCGCCTCATCCTCCAAGACGTCACTGTCTTCGCCCTCAACGTCTCCGCCGTCCCGCCGATCACCATCTCCGCCACGATGCAGATCACCGTCTCGTCCCGCAACCCTAACAGCCGCATTGGCGTTTACTACCAGAAAATGGATGTCTACGCCGCCTACCGCGGCCAGCAGGTCACGCTCCCCACCGTGCTGCCGCCGACGTACCAAGGCCATAACGACGTCGTTGTTTGGTCCCCGTTCTTGTATGGCGACGCCGTGCCGGTGTCGCCGGAGTTTGCAGGGGCTTTGAGCGAGGATAACAATGTTGGAGCCATGCTGTTCAATATCAAAGTCAATGGGCAGGTAGTTCGGTGGAAGGTTGGGAGCTGGATCTCCGGGAGATATCGGCTGAACGCGAACTGTCCGGCGTACATAAGGTTCGGCGACCCGAAGCAAGGGATCGCCTTCGGACCGGCCATGAAGTTTCAGTTCGTTCAAGCTTGTTATGTCGACATT

Protein sequence

MTVKDCDHHHHHCDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVFALNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGHNDVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLNANCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI

Homology

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BLAST of MS002857.1 vs. NCBI nr
Match: XP_022142599.1 (NDR1/HIN1-like protein 1 [Momordica charantia])

HSP 1 Score: 431.0 bits (1107), Expect = 5.9e-117
Identity = 211/213 (99.06%), Postives = 212/213 (99.53%), Query Frame = 0


Query: 1   MTVKDCDHHHHHCDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVFA 60
           MTVKDCDHHHHHCDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVFA
Sbjct: 1   MTVKDCDHHHHHCDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVFA 60

Query: 61  LNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGHN 120
           LNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGHN
Sbjct: 61  LNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGHN 120

Query: 121 DVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLNA 180
           DVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLF+IKVNGQ VRWKVGSWISGRYRLNA
Sbjct: 121 DVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFSIKVNGQ-VRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI 214
           NCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI
Sbjct: 181 NCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI 212

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BLAST of MS002857.1 vs. NCBI nr
Match: XP_023520711.1 (NDR1/HIN1-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.0 bits (998), Expect = 2.6e-104
Identity = 186/214 (86.92%), Postives = 200/214 (93.46%), Query Frame = 0


Query: 1   MTVKDCDHHHHH-CDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHH C+R RLYRRIACAIFTV+LL+ +VIFLIWAILRPSKPRLILQDVTVF
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACAIFTVLLLISLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  ALNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGH 120
            LNVS+VPP  IS TMQ+T+SS NPNSRIGVYYQ MDVYAAYRGQQVTLPT+LPPTYQGH
Sbjct: 61  GLNVSSVPPAAISITMQVTISSHNPNSRIGVYYQTMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLN 180
           NDV VWSPFLYG+AVPV+PEFA AL+EDNNVGAMLFNIK+NGQ VRWKVGSWISGRYRLN
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQ-VRWKVGSWISGRYRLN 180

Query: 181 ANCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI 214
           ANCPAYI+FGDPK GIAFGPAMKF+FVQ CYVDI
Sbjct: 181 ANCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 213

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BLAST of MS002857.1 vs. NCBI nr
Match: XP_022927415.1 (NDR1/HIN1-like protein 1 [Cucurbita moschata])

HSP 1 Score: 389.0 bits (998), Expect = 2.6e-104
Identity = 185/214 (86.45%), Postives = 200/214 (93.46%), Query Frame = 0


Query: 1   MTVKDCD-HHHHHCDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCD HHHHHC+R RLYRRIACAIFTV+LL+ +VIFLIWAILRPSKPRLILQDVTVF
Sbjct: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  ALNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGH 120
            LNVS+VPP  IS TMQ+T+SS NPNSRIGVYYQ MDVYAAYRGQQVTLPT+LPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLN 180
           NDV +WSPFLYG+AVPV+PEFA AL+EDNNVGAMLFNIK+NGQ VRWKVGSWISGRYRLN
Sbjct: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQ-VRWKVGSWISGRYRLN 180

Query: 181 ANCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI 214
           ANCPAYI+FGDPK GIAFGPAMKF+FVQ CYVDI
Sbjct: 181 ANCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 213

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BLAST of MS002857.1 vs. NCBI nr
Match: KAG7019347.1 (NDR1/HIN1-like protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 388.7 bits (997), Expect = 3.3e-104
Identity = 186/214 (86.92%), Postives = 200/214 (93.46%), Query Frame = 0


Query: 1   MTVKDCDHHHHH-CDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHH C+R RLYRRIACAIFTV+LL+ +VIFLIWAILRPSKPRLILQDVTVF
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACAIFTVLLLISLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  ALNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGH 120
            LNVS+VPP  IS TMQ+T+SS NPNSRIGVYYQ MDVYAAYRGQQVTLPT+LPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLN 180
           NDV VWSPFLYG+AVPV+PEFA AL+EDNNVGAMLFNIK+NGQ VRWKVGSWISGRYRLN
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQ-VRWKVGSWISGRYRLN 180

Query: 181 ANCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI 214
           ANCPAYI+FGDPK GIAFGPAMKF+FVQ CYVDI
Sbjct: 181 ANCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 213

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BLAST of MS002857.1 vs. NCBI nr
Match: XP_038877230.1 (NDR1/HIN1-like protein 1 [Benincasa hispida])

HSP 1 Score: 388.3 bits (996), Expect = 4.4e-104
Identity = 185/214 (86.45%), Postives = 201/214 (93.93%), Query Frame = 0


Query: 1   MTVKDCDHHHHH-CDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHH C+R RL+RRIAC IFTVVLL+G+VIFLIWAILRPSKPRLILQDVTVF
Sbjct: 1   MTVKDCDHHHHHDCERRRLFRRIACTIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  ALNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGH 120
           +LN+S++PP  IS TMQIT+SS NPN+RIGVYYQ MDVYAAYRGQQVTLPT+LPPTYQGH
Sbjct: 61  SLNISSMPPAAISTTMQITISSHNPNTRIGVYYQLMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLN 180
           NDV VWSPFLYG+AVPV+PEFA AL++DNNVGAMLFNIKVNGQ VRWKVGSWISGRYRLN
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNQDNNVGAMLFNIKVNGQ-VRWKVGSWISGRYRLN 180

Query: 181 ANCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI 214
           ANCPAYI+FGDPK GIAFGPAMKFQFVQ CYVDI
Sbjct: 181 ANCPAYIKFGDPKHGIAFGPAMKFQFVQGCYVDI 213

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BLAST of MS002857.1 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-58
Identity = 108/212 (50.94%), Postives = 152/212 (71.70%), Query Frame = 0


Query: 3   VKDCDHHHHHCDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVFALN 62
           +KDC++H H   R +L RRI  +I  V+ ++ + I LIWAIL+PSKPR ILQD TV+A N
Sbjct: 1   MKDCENHGH--SRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFN 60

Query: 63  VSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGHNDV 122
           VS  PP  +++  QIT+SSRNPN++IG+YY ++DVYA YR QQ+T PT +PPTYQGH DV
Sbjct: 61  VSGNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDV 120

Query: 123 VVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLNANC 182
            +WSPF+YG +VP++P    +L  D + G +L  I+ +G+ VRWKVG++I+G+Y L+  C
Sbjct: 121 DIWSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGR-VRWKVGTFITGKYHLHVKC 180

Query: 183 PAYIRFGDPKQGIAFGP-AMKFQFVQACYVDI 214
           PAYI FG+   G+  G  A+K+ F  +C V +
Sbjct: 181 PAYINFGNKANGVIVGDNAVKYTFTTSCSVSV 209

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BLAST of MS002857.1 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.3e-47
Identity = 97/214 (45.33%), Postives = 140/214 (65.42%), Query Frame = 0


Query: 1   MTVKDCDHHHHHCDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVFA 60
           MT KDC +H           RI   I   +++V + IFL+W IL+P+KPR ILQD TV+A
Sbjct: 1   MTTKDCGNHGGG-GGGGTASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYA 60

Query: 61  LNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGHN 120
            N+S   P  +++  QIT++SRN NSRIG+YY ++ VYA YR QQ+TL T +PPTYQGH 
Sbjct: 61  FNLS--QPNLLTSNFQITIASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHK 120

Query: 121 DVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLNA 180
           +  VWSPF+YG++VP++P  A AL ++ N G +   I+ +G+ VRWKVG+ I+G+Y L+ 
Sbjct: 121 EDNVWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIRADGR-VRWKVGTLITGKYHLHV 180

Query: 181 NCPAYIRFGDPKQGIAFGP-AMKFQFVQACYVDI 214
            C A+I   D   G+  G  A+K+  +  C V++
Sbjct: 181 RCQAFINLADKAAGVHVGENAVKYMLINKCSVNV 210

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BLAST of MS002857.1 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.2e-34
Identity = 67/176 (38.07%), Postives = 113/176 (64.20%), Query Frame = 0


Query: 14  DRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVFALNVSAVPPITISA 73
           +RH+         F+ +LL   +IFL+W IL P +P   L +  +++LN++      +++
Sbjct: 22  NRHKKLFFTFSTFFSGLLL---IIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNS 81

Query: 74  TMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGHNDVVVWSPFLYGDA 133
           ++Q+T+ S+NPN ++G+YY K+ VYAAYRGQQ+T    LPP YQ H ++ + + FL G  
Sbjct: 82  SVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTE 141

Query: 134 VPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLNANCPAYIRFG 190
           +PV+  F   +S + + G ++  +K++G+ +RWK+G+W+SG YR N NC A + FG
Sbjct: 142 LPVAQSFGYQISRERSTGKIIIGMKMDGK-LRWKIGTWVSGAYRFNVNCLAIVAFG 193

[Close]

BLAST of MS002857.1 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 44/160 (27.50%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 26  IFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVFALNVSAVPPITISATMQITVSSRNPN 85
           I ++++++GV   + W I+RP   +  + D ++   + ++ P   +   + +TV  RNPN
Sbjct: 45  IISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTS-PDNILRYNLALTVPVRNPN 104

Query: 86  SRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGHNDVVVWSPFLYGDAVPVSPEFAGALS 145
            RIG+YY +++ +A Y G++ +  T L P YQGH +  V +P   G  + +   F    S
Sbjct: 105 KRIGLYYDRIEAHAYYEGKRFSTIT-LTPFYQGHKNTTVLTPTFQGQNLVI---FNAGQS 164

Query: 146 EDNNVGAM--LFNIKVNGQV-VRWKVGSWISGRYRLNANC 183
              N   +  ++NI++  ++ VR+K+G     R +   +C
Sbjct: 165 RTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDC 199

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BLAST of MS002857.1 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-09
Identity = 42/158 (26.58%), Postives = 77/158 (48.73%), Query Frame = 0


Query: 25  AIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVFALNVSAVPPITISATMQITVSSRNP 84
           A+F +++L G+   +++ I RP  P+  ++  +V  +N+++  P  IS +  +TV SRN 
Sbjct: 81  AVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSP--ISPSFNVTVRSRNG 140

Query: 85  NSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGHNDVVVWSPFLYGDAVPVSPEFAGAL 144
           N +IGVYY+K      Y         V+P  YQ   +V V    L G  + ++      +
Sbjct: 141 NGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEM 200

Query: 145 SEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLNANC 183
             + +   + F +K+    V+ K GS  +    +N +C
Sbjct: 201 RNEVSKKTVPFKLKIKAP-VKIKFGSVKTWTMIVNVDC 235

[Close]

BLAST of MS002857.1 vs. ExPASy TrEMBL
Match: A0A6J1CLY1 (NDR1/HIN1-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111012675 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 2.8e-117
Identity = 211/213 (99.06%), Postives = 212/213 (99.53%), Query Frame = 0


Query: 1   MTVKDCDHHHHHCDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVFA 60
           MTVKDCDHHHHHCDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVFA
Sbjct: 1   MTVKDCDHHHHHCDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVFA 60

Query: 61  LNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGHN 120
           LNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGHN
Sbjct: 61  LNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGHN 120

Query: 121 DVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLNA 180
           DVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLF+IKVNGQ VRWKVGSWISGRYRLNA
Sbjct: 121 DVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFSIKVNGQ-VRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI 214
           NCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI
Sbjct: 181 NCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI 212

[Close]

BLAST of MS002857.1 vs. ExPASy TrEMBL
Match: A0A6J1ENV2 (NDR1/HIN1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111434247 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.2e-104
Identity = 185/214 (86.45%), Postives = 200/214 (93.46%), Query Frame = 0


Query: 1   MTVKDCD-HHHHHCDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCD HHHHHC+R RLYRRIACAIFTV+LL+ +VIFLIWAILRPSKPRLILQDVTVF
Sbjct: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  ALNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGH 120
            LNVS+VPP  IS TMQ+T+SS NPNSRIGVYYQ MDVYAAYRGQQVTLPT+LPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLN 180
           NDV +WSPFLYG+AVPV+PEFA AL+EDNNVGAMLFNIK+NGQ VRWKVGSWISGRYRLN
Sbjct: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQ-VRWKVGSWISGRYRLN 180

Query: 181 ANCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI 214
           ANCPAYI+FGDPK GIAFGPAMKF+FVQ CYVDI
Sbjct: 181 ANCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 213

[Close]

BLAST of MS002857.1 vs. ExPASy TrEMBL
Match: A0A0A0LVW5 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G169420 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.6e-104
Identity = 187/214 (87.38%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 1   MTVKDCDHHHHH-CDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHH C+R RLYRRIAC IFTVVLL+G+VIFLIWAILRPSKPRLILQDVT+ 
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60

Query: 61  ALNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGH 120
            LNVS+VPP  IS TMQIT+SS NPN+RIGVYYQ MDVYAAYRGQQVTLPT+LPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQITISSHNPNNRIGVYYQVMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLN 180
           NDV VWSPFLYG+AVPV+PEFA AL+EDNNVGAMLFNIKVNGQ VRWKVGSWISGRYRLN
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQ-VRWKVGSWISGRYRLN 180

Query: 181 ANCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI 214
           ANCPAYI+FGDPK GIAFGPAMKFQFVQ CYVDI
Sbjct: 181 ANCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 213

[Close]

BLAST of MS002857.1 vs. ExPASy TrEMBL
Match: A0A6J1IAN4 (NDR1/HIN1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111471672 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 6.1e-104
Identity = 185/214 (86.45%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 1   MTVKDCDHHHHH-CDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHH C+R RLYRRIACAIFTV+LL+ +VIFLIWAILRPSKPRLILQDVTVF
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  ALNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGH 120
            LNVS+VPP  IS TMQ+T+SS NPNSRIGVYYQ MDVYAAYRGQQVTLPT+LPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLN 180
           NDV VWSPFLYG+AVPV+PEFA AL+EDNNVGAMLFNIK+NGQ VRWKVGSWIS RYRLN
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQ-VRWKVGSWISDRYRLN 180

Query: 181 ANCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI 214
           ANCPAYI+FGDPK GIAFGPAMKF+FVQ CYVDI
Sbjct: 181 ANCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 213

[Close]

BLAST of MS002857.1 vs. ExPASy TrEMBL
Match: A0A5D3E518 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001850 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.8e-103
Identity = 183/214 (85.51%), Postives = 198/214 (92.52%), Query Frame = 0


Query: 1   MTVKDCDHHHHH-CDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHH C+R RLYRRIAC IF+++LL+G+VIFLIWAILRPSKPRLILQDVT+ 
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFSLLLLIGLVIFLIWAILRPSKPRLILQDVTLL 60

Query: 61  ALNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGH 120
            LNVS+VPP  IS TMQIT+SS NPN+RIGVYYQ MDVYAAYRGQQVTLPT+LPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQITISSHNPNTRIGVYYQVMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLN 180
           NDV VWSPFLYG+AVPV+PEFA AL+EDNNVGAMLFNIKVNGQ VRWKVGSWISGRYRLN
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQ-VRWKVGSWISGRYRLN 180

Query: 181 ANCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI 214
           ANCPAYI+FGDPK GIAFGP MKFQFVQ CYVDI
Sbjct: 181 ANCPAYIKFGDPKNGIAFGPTMKFQFVQGCYVDI 213

[Close]

BLAST of MS002857.1 vs. TAIR 10
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 234.2 bits (596), Expect = 9.8e-62
Identity = 113/213 (53.05%), Postives = 152/213 (71.36%), Query Frame = 0


Query: 1   MTVKDCDHHHHHCDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVFA 60
           MT K+C+HHH   ++ R  +RI   +   +  V  V+FL+WAIL P  PR +LQD T++A
Sbjct: 1   MTEKECEHHHDEDEKMR--KRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIYA 60

Query: 61  LNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGHN 120
            NVS   P  +++ +Q+T+SSRNPN +IG++Y ++D+YA+YR QQVTL T+LP TYQGH 
Sbjct: 61  FNVS--QPNYLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHL 120

Query: 121 DVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLNA 180
           DV +WSPFLYG  VPV+P F+ ALS+D   G +L NIK++G  VRWKVG+W+SGRYRL+ 
Sbjct: 121 DVTIWSPFLYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGW-VRWKVGTWVSGRYRLHV 180

Query: 181 NCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI 214
           NCPAYI       G   GPA+K+Q VQ C VD+
Sbjct: 181 NCPAYITLAGHFSG--DGPAVKYQLVQRCAVDV 206

[Close]

BLAST of MS002857.1 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 227.6 bits (579), Expect = 9.2e-60
Identity = 108/212 (50.94%), Postives = 152/212 (71.70%), Query Frame = 0


Query: 3   VKDCDHHHHHCDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVFALN 62
           +KDC++H H   R +L RRI  +I  V+ ++ + I LIWAIL+PSKPR ILQD TV+A N
Sbjct: 1   MKDCENHGH--SRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFN 60

Query: 63  VSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGHNDV 122
           VS  PP  +++  QIT+SSRNPN++IG+YY ++DVYA YR QQ+T PT +PPTYQGH DV
Sbjct: 61  VSGNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDV 120

Query: 123 VVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLNANC 182
            +WSPF+YG +VP++P    +L  D + G +L  I+ +G+ VRWKVG++I+G+Y L+  C
Sbjct: 121 DIWSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGR-VRWKVGTFITGKYHLHVKC 180

Query: 183 PAYIRFGDPKQGIAFGP-AMKFQFVQACYVDI 214
           PAYI FG+   G+  G  A+K+ F  +C V +
Sbjct: 181 PAYINFGNKANGVIVGDNAVKYTFTTSCSVSV 209

[Close]

BLAST of MS002857.1 vs. TAIR 10
Match: AT5G22200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 218.8 bits (556), Expect = 4.3e-57
Identity = 111/215 (51.63%), Postives = 148/215 (68.84%), Query Frame = 0


Query: 1   MTVKDCDHHHHHCDR--HRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTV 60
           MT + CD H+ + +R    + RRIA A   +++ V  V+FL+WAIL P  PR +LQDVT+
Sbjct: 1   MTGRYCDQHNGYEERRMRMMMRRIAWACLGLIVAVAFVVFLVWAILHPHGPRFVLQDVTI 60

Query: 61  FALNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQG 120
              NVS   P  +S+ +Q+TVSSRNPN +IG++Y ++D+Y  YR Q+VTL  +LP TYQG
Sbjct: 61  NDFNVS--QPNFLSSNLQVTVSSRNPNDKIGIFYDRLDIYVTYRNQEVTLARLLPSTYQG 120

Query: 121 HNDVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRL 180
           H +V VWSPFL G AVPV+P  + AL+ED   G +L NIK++G  VRWKVGSW+SG YRL
Sbjct: 121 HLEVTVWSPFLIGSAVPVAPYLSSALNEDLFAGLVLLNIKIDGW-VRWKVGSWVSGSYRL 180

Query: 181 NANCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI 214
           + NCPA+I       G   GPA+K+Q VQ C VD+
Sbjct: 181 HVNCPAFITVTGKLTGT--GPAIKYQLVQRCAVDV 210

[Close]

BLAST of MS002857.1 vs. TAIR 10
Match: AT5G06330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 201.8 bits (512), Expect = 5.4e-52
Identity = 101/213 (47.42%), Postives = 143/213 (67.14%), Query Frame = 0


Query: 1   MTVKDCDHHHHHCDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVFA 60
           MT KDC  H  H   +R  + +   I  ++LL+ VVI L+WAIL+PSKPR +LQD TVF 
Sbjct: 1   MTSKDCGSHDSHSSCNR--KIVIWTISIILLLILVVILLVWAILQPSKPRFVLQDATVFN 60

Query: 61  LNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGHN 120
            NVS  PP  +++  Q T+SSRNPN +IG+YY ++DVYA+YR QQ+TLP+ +  TYQGH 
Sbjct: 61  FNVSGNPPNLLTSNFQFTLSSRNPNDKIGIYYDRLDVYASYRSQQITLPSPMLTTYQGHK 120

Query: 121 DVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLNA 180
           +V VWSPF+ G +VPV+P  A  L +D++ GA++  + ++G+ VRWKVGS+I+G+Y L+ 
Sbjct: 121 EVNVWSPFVGGYSVPVAPYNAFYLDQDHSSGAIMLMLHLDGR-VRWKVGSFITGKYHLHV 180

Query: 181 NCPAYIRFGDPKQGIAFGPAMKFQFVQACYVDI 214
            C A I FG    G+  G   K+   + C V +
Sbjct: 181 RCHALINFGSSAAGVIVG---KYMLTETCSVSV 207

[Close]

BLAST of MS002857.1 vs. TAIR 10
Match: AT2G35960.1 (NDR1/HIN1-like 12 )

HSP 1 Score: 190.3 bits (482), Expect = 1.6e-48
Identity = 97/214 (45.33%), Postives = 140/214 (65.42%), Query Frame = 0


Query: 1   MTVKDCDHHHHHCDRHRLYRRIACAIFTVVLLVGVVIFLIWAILRPSKPRLILQDVTVFA 60
           MT KDC +H           RI   I   +++V + IFL+W IL+P+KPR ILQD TV+A
Sbjct: 1   MTTKDCGNHGGG-GGGGTASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYA 60

Query: 61  LNVSAVPPITISATMQITVSSRNPNSRIGVYYQKMDVYAAYRGQQVTLPTVLPPTYQGHN 120
            N+S   P  +++  QIT++SRN NSRIG+YY ++ VYA YR QQ+TL T +PPTYQGH 
Sbjct: 61  FNLS--QPNLLTSNFQITIASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHK 120

Query: 121 DVVVWSPFLYGDAVPVSPEFAGALSEDNNVGAMLFNIKVNGQVVRWKVGSWISGRYRLNA 180
           +  VWSPF+YG++VP++P  A AL ++ N G +   I+ +G+ VRWKVG+ I+G+Y L+ 
Sbjct: 121 EDNVWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIRADGR-VRWKVGTLITGKYHLHV 180

Query: 181 NCPAYIRFGDPKQGIAFGP-AMKFQFVQACYVDI 214
            C A+I   D   G+  G  A+K+  +  C V++
Sbjct: 181 RCQAFINLADKAAGVHVGENAVKYMLINKCSVNV 210

The following BLAST results are available for this feature:

BLAST of MS002857.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142599.1	5.9e-117	99.06	NDR1/HIN1-like protein 1 [Momordica charantia]	[more]
XP_023520711.1	2.6e-104	86.92	NDR1/HIN1-like protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022927415.1	2.6e-104	86.45	NDR1/HIN1-like protein 1 [Cucurbita moschata]	[more]
KAG7019347.1	3.3e-104	86.92	NDR1/HIN1-like protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038877230.1	4.4e-104	86.45	NDR1/HIN1-like protein 1 [Benincasa hispida]	[more]

BLAST of MS002857.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRN0	1.3e-58	50.94	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
Q9SJ54	2.3e-47	45.33	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9FI03	2.2e-34	38.07	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9SJ52	1.3e-10	27.50	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9ZVD2	1.4e-09	26.58	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]

BLAST of MS002857.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLY1	2.8e-117	99.06	NDR1/HIN1-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111012675 PE=4 SV=...	[more]
A0A6J1ENV2	1.2e-104	86.45	NDR1/HIN1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111434247 PE=4 SV=1	[more]
A0A0A0LVW5	1.6e-104	87.38	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G169420 PE=4 ...	[more]
A0A6J1IAN4	6.1e-104	86.45	NDR1/HIN1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111471672 PE=4 SV=1	[more]
A0A5D3E518	6.8e-103	85.51	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of MS002857.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44220.1	9.8e-62	53.05	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11660.1	9.2e-60	50.94	NDR1/HIN1-like 1	[more]
AT5G22200.1	4.3e-57	51.63	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06330.1	5.4e-52	47.42	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35960.1	1.6e-48	45.33	NDR1/HIN1-like 12	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 78..182 e-value: 1.4E-9 score: 38.4
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 11..213
None	No IPR available	PANTHER	PTHR31415:SF127	PROTEIN YLS9-LIKE	coord: 11..213

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS002857	MS002857	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS002857.1-cds	MS002857.1-cds-scaffold359:238118..238267	CDS
MS002857.1-cds	MS002857.1-cds-scaffold359:239568..240056	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS002857.1	MS002857.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism