MS001894.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS001894.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	G-patch domain-containing protein
Location	scaffold30: 777403 .. 782053 (+)
Sequence length	1239
RNA-Seq Expression	MS001894.1
Synteny	MS001894.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATGGAGGGCGCGACAGAGTCCGGTGCCCAGGATTTGCAGGACAGCAATTGCTCCTTCGTTTGGGACGAGAATTCTCGCTTGTACTTCCACTCCAGGTTTCTTCAATTATCCTATCAAGTATCAACAAATGATTTCGTTTAGTTGCTTTTTCATTGCCAAATCCATGAATATCTGCACAGCAATCTTTTGGATAAGGAAATGTGTAGTTTCCGAAGATTCAGATTATTTAAACTATACTTACAAAGATAGTGGAATCGATCGAATTAAAATACCTTTATGGCAAAAGGTTTAGTCGATGAGTAATCTTATTGTCTGTAACATGAAGTTGCAATCAATTTGTAGTCATTTTGTTGATTTCTTGTTTAATAGATAGCGATTCAACGTACTGCATAAAAGAATTGTCATATATTGAAATTTTAGCTGAATTTCAATAATTGTCGTACTGTTATTTTCTGTGACATTTTATCGTACTGTTATTCTGTTATTTTTTTCCTTGAAGGATGTCGCCGAATTTCAATATTTCTGCTTATAGGTTAGCCATATCAACTCTATTTTCTACTGCAGATTATTACTTACTTGCGTTAACTTTCAGCAGTAGTGGATTTTATCATGATCCTGTTGCCGGTTGGTACTATAGCAGTCGAGATGGTTCTTATTACAAATTTGAAAATGGAAGCTATGTTCTTCTTCAGTTTGACCAGGTACCATAACTTGGTTGTTTATATGGTCATACTCAATGCCCTTCGTATTGCCTGTGGTCTTCTTCCGTTTTGATCTTTTGATTTGATATCACTTTAATTAATTTCTTACTTTTTGGACATCGGAGCAGGGTGAAGAATGTAAGACGTATCTTGATAATTCTGTTAAAGGCGGACCATGTAGACAAGTGTGTAATACCGACAGTGAGGATCACTCTTCATTTGAGGCCAGCAAATATGATATCTCTAAATGCAAAGAAAGTGACTGTGACGGACTACCATTAGGTTAGTTATCAATGCATGAAAACCTTCTTCAGCTAAGTATGCTTCAGCTGCGTGTTTTCAGTTAAAGATCAAGTTTGGCTGTTACCATGTAATTGCTAATTATTTTATTATACTAGCTGATAGATCAAATAGATTACGGTTTCAAGTGAAGTTTCATATGGCTGATAGATCTTTAGTTGGCTTGTGGGGATATCTCATTCTCATCTCCCACTTTTTTTGTATTTCCCACTTTTGATAATGAAAGTTTTGTTTCTTATTAGAAAAAAAAGGGTGAAGTTTCATATGCCTGGTTTGTTTTGGGACCTGTAGTATGTATGCTTTGGATGACTGTTTAAATATAGATCTTCATCTTATATTGATCCAGACATTTTTATTTAAAAATGTGTCCGGAGCCATTAGTTTCCATATGTGGATCTTGTTTAACCCATTGTTTAATAATTTCATCAAGCTAGAATGATTGGATCAGGCTTTGCTTTCATCAAATCCTAAATATATATTCTGTATTTAAAATCATTTGTCAAGGGCATGATAGACCTCTTTATTGTGACTGCTGAATCATCACTAGTTTTCCCCTACTGTTATCAAGTTGATCACATCTCGTATTGAAGATTTTTCTAAACTCCACTGCCATTTTCTGCAATGCCATTGATGCTGTTGCTTTCATGACTATGCCTGCTGCAACATTTCTTTAGTTGGCTGTGGATGCACATTTGATGACCTCTCACTATATGAATGGAGGATAATTTATCATATACTAAGAGGAAGCCGGATGCTGTCTTTAGTACTTAACTGACGAATAATGTCACTTTTTTTTTTCATTTTTAACAGAAGAAACAGAGGAGGGCAATAATGTTCATGAGCTTGAGAATCCTCCCACATCTTTGTGGTATACTACATTTGGATGAGATGTTAATTCAATTTATAGCTGTTTTTTGTTCTCTCTTTCATATACACTTTCACCTTTTTAGGTTAGAAGATACGCTTATTGATCTTTTTTTGTCCGGTTATTCCAATTCAGAAGTCATAGCCACTAATGACAACACTTCACCTACGCCTTCCACAACTAATGATGATAATAACTTTCAGTCATCAAGCGATGGTGTGCTCTAACTCTTCTCTTGAAGTCGAGAAGGCAATTTAGTTATAATTTAAAACTAAAATGAGTGTTGTTTTTGTTCAGGCTATGATGTTACTCAGAGGACGGAAGGTGAATGGTTCCAAGATGAAAATCATGCAATGGTGAATGCAAGCGAAAGAGTATTAGATGGAGGTAATGTAACTTCACAAATTGAGAAGGTAATTTAATTATTGTTGTGAAACTAAAATTACTTTGGTTGTGGTTCAGGCTATGAGGATATTCAGAGGATGGAAGGTGAATGGTTCCAAGATGAAAATCATGCTACAGTGAATCCAAGCGAAAGTGTATCAGATGGAGGTAATGTGAATTTACTAATCGGCTGCCTGTGTCTGAAGTTTGAGGTCAATTATAGTTTAAGTATGCTAGTCTTAATGAGACTGTTGCATGCAATATTTTTCTTTTTATTGTGTATCTTATATATCTTTCTAATAAATTTGATTATTTTTTAATTGCTACAATCATTTAGATGTCTAAAAATATTTTGTAAAGTATGAAGTAACCTGTGATGCATTTAATTTGGAGTACATTAGAAAATATCAGCAACAATTTATTAGGAATGTAGAAATATGCATCAATGATTATTTTACTTTCACCATCATACATGTGATTTAATTAGTGAAATTTTGAGCTAGTTAACAAATTTTAAATTCATTTTATATCATATCAAGTTCTTTCTCAATGTTAATGTTAAATTTATGTATTGTTTTATGTCGTAGATGACACATTATCATCAATTTACTTGGTCATTATTGTAATAAATTGCAATGAGTATATACGATTAATATTATTTTTATTAGTCACATGAAATAAAACCATTCTGAAATTTAGAAATAATACATATAGATTATTGTACTTTTGTTGAAACGTTTTATTTCATTCTTCTAATAATAAAGATTTACCTACTTTATTTTATTTTTTTGAACTTTTCTATATCTTAAGTATCATTTCTTAATTTCGATATCAAAAACATTGAATCATTTTTTATCACCTAATTACAGTTAGCACTTAATATTTAGTAAGGAAATAAGGGCATCCTCATTTAAAGTTTCCTGACAATTGTGCTTATGCAAGAATAATGACCGTTATACACAAGTACATGCTTGCTTCTTTTTTTTTCTCTTGCCCTGTATGTAATCTCTTGCAAGACGTGTAGAGAGAGTAAAAGATGTTCATGCCGTAGTACGTTACCATCGATTCTGTCATCCATGTTAAAAAATCTTGTTTGTTTTGAAGGTGTTTCCACAGATGAAGATAACTGGAAAGCCCAGTATGGTCAAGTCACTCATTATGGGGAAGAAACAACTCCCAAATTGTCTGTTGTGGACCTCTGGGAGTGGTCGACAGTCTCAGAGTCCAGGCCAGGTGGAAAAGGCAAGGTTACGAGGTTGGTTGGAAGACTTGTGAGAAAGTCTGCAAAGCTTCATCCTTCAGTGTCTTCCAATGGCACTCTTCTCAAAACCGCTCCAATTTCTGAAGTACATCTAGATTTGGTACGAGTTGCAACAGGTGAGAACTGCCTCGTGCATATGGCTCATTTATAAATCTTTGGTGAATCGATGATGGTCTACAAGTTATTTTATTCTATTTTACCATATTCCGTAACTTTGGGAGGTTGGAAAGCTACCGTTTTGTGACGATCTGAAATTTACTTTCAGGGAAAATCTATAAGTTACACAGCCCTAGTAAGAGGTATTTGGCGTCCATGTCAAGTTTTGATTCATCCAACCCTACAGAAGACTGGGGTTTCCCTGATTTATTAGACCGGTTACCCGACCTCGCTAATAACGAAGCAAAAGTTGCATGCACAGGCACTGTTAGTACGGCTGTATCTACGTTGGGAGATAAACTCCTCGTGTCTGAAAAGGTAAACTTTATATTACTCGGGCTAGTCAATGTCGCTGCGACCCCTGTTTGACTTGTTTTAAGATGTTGAAAGCCAAATAAATTCAATCTTATCGATGCTCGATCATCCTACTCGAACTCCACTTATCTCAAAACTATCATCTCAGCGTTCAAGCCAAAATCTGTATAGAGACAGAGCTGCCGAGAGAAGGATTCTTCATGGTGGTTTCGGGGTGGGTCCTGGACAGAAGAATTCTGCCATTGATCGTGGTGATCTACCATCATCGCCCCCCTCTGGCTGTTCTGAGAGCGCTGCAGCTGAAGCTTTGGATATTTCATTTGGAGCTGGTAGTTACGCACGAAAAATCTTAAAAAGCATGGGCTGGAAAGAGGTATGTCGAATTTAATATTTGCAACTTTATAAAATAGTTAAAATTATTCCCCCTTAAATAAATTATGAAAAAAAACAAGTACAATTTTAAAAAACCGAAAACTAAAAGCAGAATCATGATCAAATTTAAAACTGAAAACTAAAATGATTTAAAAGGCCACTTATTTGCAACGTTGACAGGGAGAGGGTCTTGGCAACAGCACAAAGGGCATGGTGGAACCACTTGAAGCTGTTGGAAATATTGGGAATGCTGGAATAGGCTGGCCTCGGGGAATCAAAAAACTCGATACCAAG

mRNA sequence

AAAATGGAGGGCGCGACAGAGTCCGGTGCCCAGGATTTGCAGGACAGCAATTGCTCCTTCGTTTGGGACGAGAATTCTCGCTTGTACTTCCACTCCAGTAGTGGATTTTATCATGATCCTGTTGCCGGTTGGTACTATAGCAGTCGAGATGGTTCTTATTACAAATTTGAAAATGGAAGCTATGTTCTTCTTCAGTTTGACCAGCAGGGTGAAGAATGTAAGACGTATCTTGATAATTCTGTTAAAGGCGGACCATGTAGACAAGTGTGTAATACCGACAGTGAGGATCACTCTTCATTTGAGGCCAGCAAATATGATATCTCTAAATGCAAAGAAAGTGACTGTGACGGACTACCATTAGGTGTTTCCACAGATGAAGATAACTGGAAAGCCCAGTATGGTCAAGTCACTCATTATGGGGAAGAAACAACTCCCAAATTGTCTGTTGTGGACCTCTGGGAGTGGTCGACAGTCTCAGAGTCCAGGCCAGGTGGAAAAGGCAAGGTTACGAGGTTGGTTGGAAGACTTGTGAGAAAGTCTGCAAAGCTTCATCCTTCAGTGTCTTCCAATGGCACTCTTCTCAAAACCGCTCCAATTTCTGAAGTACATCTAGATTTGGTACGAGTTGCAACAGGTGAGAACTGCCTCGTTGGAAAGCTACCGTTTTGTGACGATCTGAATTTACTTTCAGGGAAAATCTATAAGTTACACAGCCCTAGTAAGAGGTATTTGGCGTCCATGTCAAGTTTTGATTCATCCAACCCTACAGAAGACTGGGGTTTCCCTGATTTATTAGACCGGTTACCCGACCTCGCTAATAACGAAGCAAAAGTTGCATGCACAGGCACTGTTAGTACGGCTGTATCTACGTTGGGAGATAAACTCCTCGTGTCTGAAAAGCGTTCAAGCCAAAATCTGTATAGAGACAGAGCTGCCGAGAGAAGGATTCTTCATGGTGGTTTCGGGGTGGGTCCTGGACAGAAGAATTCTGCCATTGATCGTGGTGATCTACCATCATCGCCCCCCTCTGGCTGTTCTGAGAGCGCTGCAGCTGAAGCTTTGGATATTTCATTTGGAGCTGGTAGTTACGCACGAAAAATCTTAAAAAGCATGGGCTGGAAAGAGGGAGAGGGTCTTGGCAACAGCACAAAGGGCATGGTGGAACCACTTGAAGCTGTTGGAAATATTGGGAATGCTGGAATAGGCTGGCCTCGGGGAATCAAAAAACTCGATACCAAG

Coding sequence (CDS)

AAAATGGAGGGCGCGACAGAGTCCGGTGCCCAGGATTTGCAGGACAGCAATTGCTCCTTCGTTTGGGACGAGAATTCTCGCTTGTACTTCCACTCCAGTAGTGGATTTTATCATGATCCTGTTGCCGGTTGGTACTATAGCAGTCGAGATGGTTCTTATTACAAATTTGAAAATGGAAGCTATGTTCTTCTTCAGTTTGACCAGCAGGGTGAAGAATGTAAGACGTATCTTGATAATTCTGTTAAAGGCGGACCATGTAGACAAGTGTGTAATACCGACAGTGAGGATCACTCTTCATTTGAGGCCAGCAAATATGATATCTCTAAATGCAAAGAAAGTGACTGTGACGGACTACCATTAGGTGTTTCCACAGATGAAGATAACTGGAAAGCCCAGTATGGTCAAGTCACTCATTATGGGGAAGAAACAACTCCCAAATTGTCTGTTGTGGACCTCTGGGAGTGGTCGACAGTCTCAGAGTCCAGGCCAGGTGGAAAAGGCAAGGTTACGAGGTTGGTTGGAAGACTTGTGAGAAAGTCTGCAAAGCTTCATCCTTCAGTGTCTTCCAATGGCACTCTTCTCAAAACCGCTCCAATTTCTGAAGTACATCTAGATTTGGTACGAGTTGCAACAGGTGAGAACTGCCTCGTTGGAAAGCTACCGTTTTGTGACGATCTGAATTTACTTTCAGGGAAAATCTATAAGTTACACAGCCCTAGTAAGAGGTATTTGGCGTCCATGTCAAGTTTTGATTCATCCAACCCTACAGAAGACTGGGGTTTCCCTGATTTATTAGACCGGTTACCCGACCTCGCTAATAACGAAGCAAAAGTTGCATGCACAGGCACTGTTAGTACGGCTGTATCTACGTTGGGAGATAAACTCCTCGTGTCTGAAAAGCGTTCAAGCCAAAATCTGTATAGAGACAGAGCTGCCGAGAGAAGGATTCTTCATGGTGGTTTCGGGGTGGGTCCTGGACAGAAGAATTCTGCCATTGATCGTGGTGATCTACCATCATCGCCCCCCTCTGGCTGTTCTGAGAGCGCTGCAGCTGAAGCTTTGGATATTTCATTTGGAGCTGGTAGTTACGCACGAAAAATCTTAAAAAGCATGGGCTGGAAAGAGGGAGAGGGTCTTGGCAACAGCACAAAGGGCATGGTGGAACCACTTGAAGCTGTTGGAAATATTGGGAATGCTGGAATAGGCTGGCCTCGGGGAATCAAAAAACTCGATACCAAG

Protein sequence

KMEGATESGAQDLQDSNCSFVWDENSRLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQFDQQGEECKTYLDNSVKGGPCRQVCNTDSEDHSSFEASKYDISKCKESDCDGLPLGVSTDEDNWKAQYGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTRLVGRLVRKSAKLHPSVSSNGTLLKTAPISEVHLDLVRVATGENCLVGKLPFCDDLNLLSGKIYKLHSPSKRYLASMSSFDSSNPTEDWGFPDLLDRLPDLANNEAKVACTGTVSTAVSTLGDKLLVSEKRSSQNLYRDRAAERRILHGGFGVGPGQKNSAIDRGDLPSSPPSGCSESAAAEALDISFGAGSYARKILKSMGWKEGEGLGNSTKGMVEPLEAVGNIGNAGIGWPRGIKKLDTK

Homology

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BLAST of MS001894.1 vs. NCBI nr
Match: KAG6589431.1 (SUPPRESSOR OF ABI3-5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 581.3 bits (1497), Expect = 6.8e-162
Identity = 313/503 (62.23%), Postives = 345/503 (68.59%), Query Frame = 0


Query: 2   MEGATESGAQDLQDSNCSFVWDENSRLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY 61
           ME  T+SG+++LQ+S CSFVWDENS+LYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY
Sbjct: 1   MESETQSGSEELQNSRCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY 60

Query: 62  VLLQFDQQGEECKTYLDNSVKGGPCRQVCNTDSEDHSSFEASKYDISKCKESDCDGLPL- 121
           VLLQ ++Q EECKTY D+ VKG PCRQVC + SEDHSSFEAS+ D S CK S  DGLPL 
Sbjct: 61  VLLQMNEQDEECKTYPDDPVKGEPCRQVCISGSEDHSSFEASEIDTSNCKGSVGDGLPLE 120

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 121 VAEGIGGHEHENPPTSLWLEDTLIDLFLSGYSNSEVIATNDSISPTPSTTNHGYSDTQMM 180

Query: 182 --------------------------------GVSTDEDNWKAQYGQVTHYGEETTPKLS 241
                                           GVSTDEDNW+AQYGQVT+YG E  PKLS
Sbjct: 181 EGYDDTQRMEGERLQDENHTILNPNESVLLDEGVSTDEDNWRAQYGQVTNYG-EAIPKLS 240

Query: 242 VVDLWEWSTVSESRPGGKGKVTRLVGRLVRKSAKLHPSVSSNGTLLKTAPISEVHLDLVR 301
           V+D+W+WSTV+ESR GGKGKV RLVGRLVRKSAKLHPSVSSNG LLKTAP+ EVHLDLVR
Sbjct: 241 VMDIWDWSTVTESRTGGKGKVMRLVGRLVRKSAKLHPSVSSNGALLKTAPVCEVHLDLVR 300

Query: 302 VATGENCLVGKLPFCDDLNLLSGKIYKLHSPSKRYLASMSSFDSSNPTEDWGFPDLLDRL 361
           VAT                   GKIYKLH+PSK+YL SMS+FDSSNPT+DWGFPDLLDR 
Sbjct: 301 VAT-------------------GKIYKLHNPSKKYLTSMSTFDSSNPTKDWGFPDLLDRP 360

Query: 362 PDLANNEAKVACTGTVSTAVSTLGDKLLVSEKRSSQNLYRDRAAERRILHGGFGVGPGQK 412
            DL NNEAKVA TGTVS + STL D L  + K SSQN YRDRAAERR+LHGGFGVGPGQK
Sbjct: 361 TDLTNNEAKVASTGTVSMSASTLVDNLSATVKCSSQNQYRDRAAERRVLHGGFGVGPGQK 420

[Close]

BLAST of MS001894.1 vs. NCBI nr
Match: XP_022921822.1 (SUPPRESSOR OF ABI3-5 isoform X4 [Cucurbita moschata])

HSP 1 Score: 573.5 bits (1477), Expect = 1.4e-159
Identity = 314/524 (59.92%), Postives = 344/524 (65.65%), Query Frame = 0


Query: 2   MEGATESGAQDLQDSNCSFVWDENSRLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY 61
           ME  T+SG+++LQ+S CSFVWDENS+LYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY
Sbjct: 1   MESETQSGSEELQNSRCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY 60

Query: 62  VLLQFDQQGEECKTYLDNSVKGGPCRQVCNTDSEDHSSFEASKYDISKCKESDCDGLPL- 121
           VLLQ ++Q EECKTY D+ VKG PCRQVC + SEDHSSFEAS+ D S CK S  DGLPL 
Sbjct: 61  VLLQMNEQDEECKTYPDDPVKGEPCRQVCISGSEDHSSFEASEIDTSNCKGSVGDGLPLE 120

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 121 VAEGIGGHEHENPPTSLWLEDTLIDLFLSGYSNSEVIATNDSISPTPSTTNHGYSDTQMM 180

Query: 182 -----------------------------------------------------GVSTDED 241
                                                                GVSTDED
Sbjct: 181 EGEPFQDDNRSIVNSNKRVLDGGYDDTQRMEGERLQDENHTILNPNESVLLDEGVSTDED 240

Query: 242 NWKAQYGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTRLVGRLVRKSAKLHPSV 301
           NW+AQYGQVT+YG E  PKLSV+D+W+WSTV ESR GGKGKV RLVGRLVRKSAKLHPSV
Sbjct: 241 NWRAQYGQVTNYG-EAIPKLSVMDIWDWSTVMESRTGGKGKVMRLVGRLVRKSAKLHPSV 300

Query: 302 SSNGTLLKTAPISEVHLDLVRVATGENCLVGKLPFCDDLNLLSGKIYKLHSPSKRYLASM 361
           SSNG LLKTAP+ EVHLDLVRVAT                   GKIYKLH+PSK+YL SM
Sbjct: 301 SSNGALLKTAPVCEVHLDLVRVAT-------------------GKIYKLHNPSKKYLTSM 360

Query: 362 SSFDSSNPTEDWGFPDLLDRLPDLANNEAKVACTGTVSTAVSTLGDKLLVSEKRSSQNLY 412
           S+FDSSNPT+DWGFPDLLDR  DL NNEAKVA TGTVS + STL D L V+ K SSQN Y
Sbjct: 361 STFDSSNPTKDWGFPDLLDRPTDLTNNEAKVASTGTVSMSASTLVDNLSVTVKGSSQNQY 420

[Close]

BLAST of MS001894.1 vs. NCBI nr
Match: XP_022921819.1 (uncharacterized protein LOC111429960 isoform X1 [Cucurbita moschata])

HSP 1 Score: 570.1 bits (1468), Expect = 1.6e-158
Identity = 314/533 (58.91%), Postives = 344/533 (64.54%), Query Frame = 0


Query: 2   MEGATESGAQDLQDSNCSFVWDENSRLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY 61
           ME  T+SG+++LQ+S CSFVWDENS+LYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY
Sbjct: 1   MESETQSGSEELQNSRCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY 60

Query: 62  VLLQFDQQGEECKTYLDNSVKGGPCRQVCNTDSEDHSSFEASKYDISKCKESDCDGLPL- 121
           VLLQ ++Q EECKTY D+ VKG PCRQVC + SEDHSSFEAS+ D S CK S  DGLPL 
Sbjct: 61  VLLQMNEQDEECKTYPDDPVKGEPCRQVCISGSEDHSSFEASEIDTSNCKGSVGDGLPLE 120

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 121 VAEGIGGHEHENPPTSLWLEDTLIDLFLSGYSNSEVIATNDSISPTPSTTNHGNNFQSSS 180

Query: 182 ------------------------------------------------------------ 241
                                                                       
Sbjct: 181 NGYSDTQMMEGEPFQDDNRSIVNSNKRVLDGGYDDTQRMEGERLQDENHTILNPNESVLL 240

Query: 242 --GVSTDEDNWKAQYGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTRLVGRLVR 301
             GVSTDEDNW+AQYGQVT+YG E  PKLSV+D+W+WSTV ESR GGKGKV RLVGRLVR
Sbjct: 241 DEGVSTDEDNWRAQYGQVTNYG-EAIPKLSVMDIWDWSTVMESRTGGKGKVMRLVGRLVR 300

Query: 302 KSAKLHPSVSSNGTLLKTAPISEVHLDLVRVATGENCLVGKLPFCDDLNLLSGKIYKLHS 361
           KSAKLHPSVSSNG LLKTAP+ EVHLDLVRVAT                   GKIYKLH+
Sbjct: 301 KSAKLHPSVSSNGALLKTAPVCEVHLDLVRVAT-------------------GKIYKLHN 360

Query: 362 PSKRYLASMSSFDSSNPTEDWGFPDLLDRLPDLANNEAKVACTGTVSTAVSTLGDKLLVS 412
           PSK+YL SMS+FDSSNPT+DWGFPDLLDR  DL NNEAKVA TGTVS + STL D L V+
Sbjct: 361 PSKKYLTSMSTFDSSNPTKDWGFPDLLDRPTDLTNNEAKVASTGTVSMSASTLVDNLSVT 420

[Close]

BLAST of MS001894.1 vs. NCBI nr
Match: KAG7023111.1 (SUPPRESSOR OF ABI3-5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 569.7 bits (1467), Expect = 2.1e-158
Identity = 313/533 (58.72%), Postives = 345/533 (64.73%), Query Frame = 0


Query: 2   MEGATESGAQDLQDSNCSFVWDENSRLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY 61
           ME  T+SG+++LQ+S CSFVWDENS+LYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY
Sbjct: 1   MESETQSGSEELQNSRCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY 60

Query: 62  VLLQFDQQGEECKTYLDNSVKGGPCRQVCNTDSEDHSSFEASKYDISKCKESDCDGLPL- 121
           VLLQ ++Q EECKTY D+ VKG PCRQVC + SEDHSSFEAS+ D S CK S  DGLPL 
Sbjct: 61  VLLQMNEQDEECKTYPDDPVKGEPCRQVCISGSEDHSSFEASEIDTSNCKGSVGDGLPLE 120

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 121 VAEGIGGHEHENPPTSLWLEDTLIDLFLSGYSNSEVIATNDSISPTPSTTNHGNNFQSSS 180

Query: 182 ------------------------------------------------------------ 241
                                                                       
Sbjct: 181 NGYSDTQMMEGERFQDDNRAIVNSNERVLDGGYDDTQRMEGERLQDENHTILNPNESVLL 240

Query: 242 --GVSTDEDNWKAQYGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTRLVGRLVR 301
             GVSTDEDNW+AQYGQVT+YG E  PKLSV+D+W+WSTV+ESR GGKGKV RLVGRLVR
Sbjct: 241 DEGVSTDEDNWRAQYGQVTNYG-EAIPKLSVLDIWDWSTVTESRTGGKGKVMRLVGRLVR 300

Query: 302 KSAKLHPSVSSNGTLLKTAPISEVHLDLVRVATGENCLVGKLPFCDDLNLLSGKIYKLHS 361
           KSAKLHPSVSSNG LLKTAP+ EVHLDLVRVAT                   GKIYKLH+
Sbjct: 301 KSAKLHPSVSSNGALLKTAPVCEVHLDLVRVAT-------------------GKIYKLHN 360

Query: 362 PSKRYLASMSSFDSSNPTEDWGFPDLLDRLPDLANNEAKVACTGTVSTAVSTLGDKLLVS 412
           PSK+YL SMS+FDSSNPT+DWGFPDLLDR  DL NNEAKVA TGTVS + STL D L  +
Sbjct: 361 PSKKYLTSMSTFDSSNPTKDWGFPDLLDRPTDLTNNEAKVASTGTVSMSASTLVDNLSAT 420

[Close]

BLAST of MS001894.1 vs. NCBI nr
Match: XP_022921821.1 (uncharacterized protein LOC111429960 isoform X3 [Cucurbita moschata])

HSP 1 Score: 564.3 bits (1453), Expect = 8.6e-157
Identity = 313/533 (58.72%), Postives = 343/533 (64.35%), Query Frame = 0


Query: 2   MEGATESGAQDLQDSNCSFVWDENSRLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY 61
           ME  T+SG+++LQ+S CSFVWDENS+LYFH SSGFYHDPVAGWYYSSRDGSYYKFENGSY
Sbjct: 1   MESETQSGSEELQNSRCSFVWDENSQLYFH-SSGFYHDPVAGWYYSSRDGSYYKFENGSY 60

Query: 62  VLLQFDQQGEECKTYLDNSVKGGPCRQVCNTDSEDHSSFEASKYDISKCKESDCDGLPL- 121
           VLLQ ++Q EECKTY D+ VKG PCRQVC + SEDHSSFEAS+ D S CK S  DGLPL 
Sbjct: 61  VLLQMNEQDEECKTYPDDPVKGEPCRQVCISGSEDHSSFEASEIDTSNCKGSVGDGLPLE 120

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 121 VAEGIGGHEHENPPTSLWLEDTLIDLFLSGYSNSEVIATNDSISPTPSTTNHGNNFQSSS 180

Query: 182 ------------------------------------------------------------ 241
                                                                       
Sbjct: 181 NGYSDTQMMEGEPFQDDNRSIVNSNKRVLDGGYDDTQRMEGERLQDENHTILNPNESVLL 240

Query: 242 --GVSTDEDNWKAQYGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTRLVGRLVR 301
             GVSTDEDNW+AQYGQVT+YG E  PKLSV+D+W+WSTV ESR GGKGKV RLVGRLVR
Sbjct: 241 DEGVSTDEDNWRAQYGQVTNYG-EAIPKLSVMDIWDWSTVMESRTGGKGKVMRLVGRLVR 300

Query: 302 KSAKLHPSVSSNGTLLKTAPISEVHLDLVRVATGENCLVGKLPFCDDLNLLSGKIYKLHS 361
           KSAKLHPSVSSNG LLKTAP+ EVHLDLVRVAT                   GKIYKLH+
Sbjct: 301 KSAKLHPSVSSNGALLKTAPVCEVHLDLVRVAT-------------------GKIYKLHN 360

Query: 362 PSKRYLASMSSFDSSNPTEDWGFPDLLDRLPDLANNEAKVACTGTVSTAVSTLGDKLLVS 412
           PSK+YL SMS+FDSSNPT+DWGFPDLLDR  DL NNEAKVA TGTVS + STL D L V+
Sbjct: 361 PSKKYLTSMSTFDSSNPTKDWGFPDLLDRPTDLTNNEAKVASTGTVSMSASTLVDNLSVT 420

[Close]

BLAST of MS001894.1 vs. ExPASy Swiss-Prot
Match: F4JCU0 (SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana OX=3702 GN=SUA PE=1 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 6.9e-08
Identity = 103/439 (23.46%), Postives = 167/439 (38.04%), Query Frame = 0


Query: 20  FVWDENSRLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQFDQQGEECKTYLDN 79
           +VWDE S  Y+ ++SG+Y+D  +G YY S  G +Y           +DQQ ++   Y+  
Sbjct: 584 YVWDEASGYYYDAASGYYYDGNSGLYYDSNSGLWY----------SYDQQTQQ---YV-- 643

Query: 80  SVKGGPCRQVCNTDSEDHSSFEASKYDISKCKESDCDGLPLGVSTDEDNWK-------AQ 139
                PC      D  + S    ++ D +K ++S    + +  +T  +  K        Q
Sbjct: 644 -----PC-----PDQNNESKVTENQPDSAKKEKSSQQKVIISAATTPNVEKVLSLPDAVQ 703

Query: 140 YGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTRLVGRLVRKSAKLH-----PSV 199
                    E   K  V ++   S    S    K K++ ++    ++S +       PS+
Sbjct: 704 AAAAAAIASEKREKERVKEIKLAS--KTSLLASKKKMSNVLTMWKQRSHETQIQRPSPSL 763

Query: 200 SSNGTLLKTAPISEVHLDLVRVATGENCLVGKLPFCDDLNLLSGKIYKLHSPSKRYLASM 259
             N   +     S         +TG++  +GKL    D+ +   +    H  S    A  
Sbjct: 764 GDNPPTVSAEARSS-------FSTGQS--MGKLK--SDVIIAKERSTSNHGVSALTTAES 823

Query: 260 SSFDSSNPTEDWGFPDLLDRLPDLANNEAKV------ACTGTVSTAVSTLGDKLL----- 319
           SS  ++  T               A++ A V            S +VS  G +       
Sbjct: 824 SSSSTTGGTLMGVMRGSFGGTLGGASSSASVQMPPILPSASPASVSVSGSGRRRFSETPT 883

Query: 320 --VSEKRSSQNLYRDRAAERRILHGGFGVGPGQKNSAID-----------RGDLPSSPPS 379
              + +   Q  YRDRAAERR L+G         N  ID             D    PP 
Sbjct: 884 AGPTHREQPQTSYRDRAAERRNLYGS---STSSGNDVIDSSEDLMGLRKGSSDPTPFPPG 943

Query: 380 ----GCSESAAAEALDI-----SFGAGSYARKILKSMGWKEGEGLGNSTKGMVEPLEAVG 414
               G + S    + D+     +    +   ++L++MGW EG GLG    GM EP++A G
Sbjct: 944 VGGRGITTSTEVSSFDVITEERAIDESNVGNRMLRNMGWHEGSGLGKDGSGMKEPVQAQG 979

[Close]

BLAST of MS001894.1 vs. ExPASy Swiss-Prot
Match: A0JMV4 (RNA-binding protein 5-A OS=Xenopus laevis OX=8355 GN=rbm5-a PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.9e-05
Identity = 36/114 (31.58%), Postives = 58/114 (50.88%), Query Frame = 0


Query: 289 STLGDKLLVSEKRSSQNLYRDRAAERRILHGGFGVGPGQKNSAIDRGDLPSSPPSGCSES 348
           S L ++   +E+   ++ YRDRAAERR+ + G    P  K           +P     E 
Sbjct: 702 SKLSEQEYEAEQTERESKYRDRAAERRVKY-GIPEPPEPKRKRF-------APTVVNYEQ 761

Query: 349 AAAEALDISFGAGSYARKILKSMGWKEGEGLGNSTKGMVEPLEAVGNIGNAGIG 403
              + +D S    +   K+L++MGWKEG GLG  ++G+  P++A   +  AG+G
Sbjct: 762 PTKDGIDNS----NIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQVRMRGAGLG 803

[Close]

BLAST of MS001894.1 vs. ExPASy Swiss-Prot
Match: Q1RMU5 (RNA-binding protein 5 OS=Bos taurus OX=9913 GN=RBM5 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.5e-05
Identity = 34/104 (32.69%), Postives = 52/104 (50.00%), Query Frame = 0


Query: 299 EKRSSQNLYRDRAAERRILHGGFGVGPGQKNSAIDRGDLPSSPPSGCSESAAAEALDISF 358
           E R  +  YRDRAAERR  +G       ++    D G +    P+        + +D S 
Sbjct: 693 ELREREMKYRDRAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPT-------KDGIDHS- 752

Query: 359 GAGSYARKILKSMGWKEGEGLGNSTKGMVEPLEAVGNIGNAGIG 403
              +   K+L++MGW+EG GLG   +G+  P+EA   +  AG+G
Sbjct: 753 ---NIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLG 785

[Close]

BLAST of MS001894.1 vs. ExPASy Swiss-Prot
Match: P52756 (RNA-binding protein 5 OS=Homo sapiens OX=9606 GN=RBM5 PE=1 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 2.5e-05
Identity = 34/104 (32.69%), Postives = 52/104 (50.00%), Query Frame = 0


Query: 299 EKRSSQNLYRDRAAERRILHGGFGVGPGQKNSAIDRGDLPSSPPSGCSESAAAEALDISF 358
           E R  +  YRDRAAERR  +G       ++    D G +    P+        + +D S 
Sbjct: 693 ELREREMKYRDRAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPT-------KDGIDHS- 752

Query: 359 GAGSYARKILKSMGWKEGEGLGNSTKGMVEPLEAVGNIGNAGIG 403
              +   K+L++MGW+EG GLG   +G+  P+EA   +  AG+G
Sbjct: 753 ---NIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLG 785

[Close]

BLAST of MS001894.1 vs. ExPASy Swiss-Prot
Match: Q91YE7 (RNA-binding protein 5 OS=Mus musculus OX=10090 GN=Rbm5 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.5e-05
Identity = 34/104 (32.69%), Postives = 52/104 (50.00%), Query Frame = 0


Query: 299 EKRSSQNLYRDRAAERRILHGGFGVGPGQKNSAIDRGDLPSSPPSGCSESAAAEALDISF 358
           E R  +  YRDRAAERR  +G       ++    D G +    P+        + +D S 
Sbjct: 693 ELREREMKYRDRAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPT-------KDGIDHS- 752

Query: 359 GAGSYARKILKSMGWKEGEGLGNSTKGMVEPLEAVGNIGNAGIG 403
              +   K+L++MGW+EG GLG   +G+  P+EA   +  AG+G
Sbjct: 753 ---NIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLG 785

[Close]

BLAST of MS001894.1 vs. ExPASy TrEMBL
Match: A0A6J1E1H5 (SUPPRESSOR OF ABI3-5 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111429960 PE=4 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 6.9e-160
Identity = 314/524 (59.92%), Postives = 344/524 (65.65%), Query Frame = 0


Query: 2   MEGATESGAQDLQDSNCSFVWDENSRLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY 61
           ME  T+SG+++LQ+S CSFVWDENS+LYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY
Sbjct: 1   MESETQSGSEELQNSRCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY 60

Query: 62  VLLQFDQQGEECKTYLDNSVKGGPCRQVCNTDSEDHSSFEASKYDISKCKESDCDGLPL- 121
           VLLQ ++Q EECKTY D+ VKG PCRQVC + SEDHSSFEAS+ D S CK S  DGLPL 
Sbjct: 61  VLLQMNEQDEECKTYPDDPVKGEPCRQVCISGSEDHSSFEASEIDTSNCKGSVGDGLPLE 120

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 121 VAEGIGGHEHENPPTSLWLEDTLIDLFLSGYSNSEVIATNDSISPTPSTTNHGYSDTQMM 180

Query: 182 -----------------------------------------------------GVSTDED 241
                                                                GVSTDED
Sbjct: 181 EGEPFQDDNRSIVNSNKRVLDGGYDDTQRMEGERLQDENHTILNPNESVLLDEGVSTDED 240

Query: 242 NWKAQYGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTRLVGRLVRKSAKLHPSV 301
           NW+AQYGQVT+YG E  PKLSV+D+W+WSTV ESR GGKGKV RLVGRLVRKSAKLHPSV
Sbjct: 241 NWRAQYGQVTNYG-EAIPKLSVMDIWDWSTVMESRTGGKGKVMRLVGRLVRKSAKLHPSV 300

Query: 302 SSNGTLLKTAPISEVHLDLVRVATGENCLVGKLPFCDDLNLLSGKIYKLHSPSKRYLASM 361
           SSNG LLKTAP+ EVHLDLVRVAT                   GKIYKLH+PSK+YL SM
Sbjct: 301 SSNGALLKTAPVCEVHLDLVRVAT-------------------GKIYKLHNPSKKYLTSM 360

Query: 362 SSFDSSNPTEDWGFPDLLDRLPDLANNEAKVACTGTVSTAVSTLGDKLLVSEKRSSQNLY 412
           S+FDSSNPT+DWGFPDLLDR  DL NNEAKVA TGTVS + STL D L V+ K SSQN Y
Sbjct: 361 STFDSSNPTKDWGFPDLLDRPTDLTNNEAKVASTGTVSMSASTLVDNLSVTVKGSSQNQY 420

[Close]

BLAST of MS001894.1 vs. ExPASy TrEMBL
Match: A0A6J1E1M2 (uncharacterized protein LOC111429960 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429960 PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 7.6e-159
Identity = 314/533 (58.91%), Postives = 344/533 (64.54%), Query Frame = 0


Query: 2   MEGATESGAQDLQDSNCSFVWDENSRLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY 61
           ME  T+SG+++LQ+S CSFVWDENS+LYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY
Sbjct: 1   MESETQSGSEELQNSRCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY 60

Query: 62  VLLQFDQQGEECKTYLDNSVKGGPCRQVCNTDSEDHSSFEASKYDISKCKESDCDGLPL- 121
           VLLQ ++Q EECKTY D+ VKG PCRQVC + SEDHSSFEAS+ D S CK S  DGLPL 
Sbjct: 61  VLLQMNEQDEECKTYPDDPVKGEPCRQVCISGSEDHSSFEASEIDTSNCKGSVGDGLPLE 120

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 121 VAEGIGGHEHENPPTSLWLEDTLIDLFLSGYSNSEVIATNDSISPTPSTTNHGNNFQSSS 180

Query: 182 ------------------------------------------------------------ 241
                                                                       
Sbjct: 181 NGYSDTQMMEGEPFQDDNRSIVNSNKRVLDGGYDDTQRMEGERLQDENHTILNPNESVLL 240

Query: 242 --GVSTDEDNWKAQYGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTRLVGRLVR 301
             GVSTDEDNW+AQYGQVT+YG E  PKLSV+D+W+WSTV ESR GGKGKV RLVGRLVR
Sbjct: 241 DEGVSTDEDNWRAQYGQVTNYG-EAIPKLSVMDIWDWSTVMESRTGGKGKVMRLVGRLVR 300

Query: 302 KSAKLHPSVSSNGTLLKTAPISEVHLDLVRVATGENCLVGKLPFCDDLNLLSGKIYKLHS 361
           KSAKLHPSVSSNG LLKTAP+ EVHLDLVRVAT                   GKIYKLH+
Sbjct: 301 KSAKLHPSVSSNGALLKTAPVCEVHLDLVRVAT-------------------GKIYKLHN 360

Query: 362 PSKRYLASMSSFDSSNPTEDWGFPDLLDRLPDLANNEAKVACTGTVSTAVSTLGDKLLVS 412
           PSK+YL SMS+FDSSNPT+DWGFPDLLDR  DL NNEAKVA TGTVS + STL D L V+
Sbjct: 361 PSKKYLTSMSTFDSSNPTKDWGFPDLLDRPTDLTNNEAKVASTGTVSMSASTLVDNLSVT 420

[Close]

BLAST of MS001894.1 vs. ExPASy TrEMBL
Match: A0A6J1E6V8 (uncharacterized protein LOC111429960 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429960 PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 4.2e-157
Identity = 313/533 (58.72%), Postives = 343/533 (64.35%), Query Frame = 0


Query: 2   MEGATESGAQDLQDSNCSFVWDENSRLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY 61
           ME  T+SG+++LQ+S CSFVWDENS+LYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY
Sbjct: 1   MESETQSGSEELQNSRCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY 60

Query: 62  VLLQFDQQGEECKTYLDNSVKGGPCRQVCNTDSEDHSSFEASKYDISKCKESDCDGLPL- 121
           VLLQ ++  EECKTY D+ VKG PCRQVC + SEDHSSFEAS+ D S CK S  DGLPL 
Sbjct: 61  VLLQMNED-EECKTYPDDPVKGEPCRQVCISGSEDHSSFEASEIDTSNCKGSVGDGLPLE 120

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 121 VAEGIGGHEHENPPTSLWLEDTLIDLFLSGYSNSEVIATNDSISPTPSTTNHGNNFQSSS 180

Query: 182 ------------------------------------------------------------ 241
                                                                       
Sbjct: 181 NGYSDTQMMEGEPFQDDNRSIVNSNKRVLDGGYDDTQRMEGERLQDENHTILNPNESVLL 240

Query: 242 --GVSTDEDNWKAQYGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTRLVGRLVR 301
             GVSTDEDNW+AQYGQVT+YG E  PKLSV+D+W+WSTV ESR GGKGKV RLVGRLVR
Sbjct: 241 DEGVSTDEDNWRAQYGQVTNYG-EAIPKLSVMDIWDWSTVMESRTGGKGKVMRLVGRLVR 300

Query: 302 KSAKLHPSVSSNGTLLKTAPISEVHLDLVRVATGENCLVGKLPFCDDLNLLSGKIYKLHS 361
           KSAKLHPSVSSNG LLKTAP+ EVHLDLVRVAT                   GKIYKLH+
Sbjct: 301 KSAKLHPSVSSNGALLKTAPVCEVHLDLVRVAT-------------------GKIYKLHN 360

Query: 362 PSKRYLASMSSFDSSNPTEDWGFPDLLDRLPDLANNEAKVACTGTVSTAVSTLGDKLLVS 412
           PSK+YL SMS+FDSSNPT+DWGFPDLLDR  DL NNEAKVA TGTVS + STL D L V+
Sbjct: 361 PSKKYLTSMSTFDSSNPTKDWGFPDLLDRPTDLTNNEAKVASTGTVSMSASTLVDNLSVT 420

[Close]

BLAST of MS001894.1 vs. ExPASy TrEMBL
Match: A0A6J1E2F3 (uncharacterized protein LOC111429960 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111429960 PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 4.2e-157
Identity = 313/533 (58.72%), Postives = 343/533 (64.35%), Query Frame = 0


Query: 2   MEGATESGAQDLQDSNCSFVWDENSRLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSY 61
           ME  T+SG+++LQ+S CSFVWDENS+LYFH SSGFYHDPVAGWYYSSRDGSYYKFENGSY
Sbjct: 1   MESETQSGSEELQNSRCSFVWDENSQLYFH-SSGFYHDPVAGWYYSSRDGSYYKFENGSY 60

Query: 62  VLLQFDQQGEECKTYLDNSVKGGPCRQVCNTDSEDHSSFEASKYDISKCKESDCDGLPL- 121
           VLLQ ++Q EECKTY D+ VKG PCRQVC + SEDHSSFEAS+ D S CK S  DGLPL 
Sbjct: 61  VLLQMNEQDEECKTYPDDPVKGEPCRQVCISGSEDHSSFEASEIDTSNCKGSVGDGLPLE 120

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 121 VAEGIGGHEHENPPTSLWLEDTLIDLFLSGYSNSEVIATNDSISPTPSTTNHGNNFQSSS 180

Query: 182 ------------------------------------------------------------ 241
                                                                       
Sbjct: 181 NGYSDTQMMEGEPFQDDNRSIVNSNKRVLDGGYDDTQRMEGERLQDENHTILNPNESVLL 240

Query: 242 --GVSTDEDNWKAQYGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTRLVGRLVR 301
             GVSTDEDNW+AQYGQVT+YG E  PKLSV+D+W+WSTV ESR GGKGKV RLVGRLVR
Sbjct: 241 DEGVSTDEDNWRAQYGQVTNYG-EAIPKLSVMDIWDWSTVMESRTGGKGKVMRLVGRLVR 300

Query: 302 KSAKLHPSVSSNGTLLKTAPISEVHLDLVRVATGENCLVGKLPFCDDLNLLSGKIYKLHS 361
           KSAKLHPSVSSNG LLKTAP+ EVHLDLVRVAT                   GKIYKLH+
Sbjct: 301 KSAKLHPSVSSNGALLKTAPVCEVHLDLVRVAT-------------------GKIYKLHN 360

Query: 362 PSKRYLASMSSFDSSNPTEDWGFPDLLDRLPDLANNEAKVACTGTVSTAVSTLGDKLLVS 412
           PSK+YL SMS+FDSSNPT+DWGFPDLLDR  DL NNEAKVA TGTVS + STL D L V+
Sbjct: 361 PSKKYLTSMSTFDSSNPTKDWGFPDLLDRPTDLTNNEAKVASTGTVSMSASTLVDNLSVT 420

[Close]

BLAST of MS001894.1 vs. ExPASy TrEMBL
Match: A0A6J1BZJ6 (uncharacterized protein LOC111007141 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007141 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 5.1e-147
Identity = 275/302 (91.06%), Postives = 276/302 (91.39%), Query Frame = 0


Query: 112 ESDCDGLPLGVSTDEDNWKAQYGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTR 171
           ES  DG   GVSTDEDNWKAQYGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTR
Sbjct: 71  ESVSDG---GVSTDEDNWKAQYGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTR 130

Query: 172 LVGRLVRKSAKLHPSVSSNGTLLKTAPISEVHLDLVRVATGENCLVGKLPFCDDLNLLSG 231
           LVGRLVRKSAKLHPSVSSNGTLLKTAPISEVHLDLVRVAT                   G
Sbjct: 131 LVGRLVRKSAKLHPSVSSNGTLLKTAPISEVHLDLVRVAT-------------------G 190

Query: 232 KIYKLHSPSKRYLASMSSFDSSNPTEDWGFPDLLDRLPDLANNEAKVACTGTVSTAVSTL 291
           KIYKLHSPSKRYLASMSSFDSSNPTEDWGFPDLLDRLPDLANNEAKVACTG VS AVSTL
Sbjct: 191 KIYKLHSPSKRYLASMSSFDSSNPTEDWGFPDLLDRLPDLANNEAKVACTGIVSAAVSTL 250

Query: 292 GDKLLVSEKRSSQNLYRDRAAERRILHGGFGVGPGQKNSAIDRGDLPSSPPSGCSESAAA 351
           GDKLLVSEKRSSQNLYRDRAAERRILHGGFGVGPGQKNSAIDRGDLPSSPPSGCSESAAA
Sbjct: 251 GDKLLVSEKRSSQNLYRDRAAERRILHGGFGVGPGQKNSAIDRGDLPSSPPSGCSESAAA 310

Query: 352 EALDISFGAGSYARKILKSMGWKEGEGLGNSTKGMVEPLEAVGNIGNAGIGWPRGIKKLD 411
           EAL+ISFGAGSYARKILKSMGWKEGEGLGNSTKGMVEPLEAVGNIGNAGIGWPRGIKKLD
Sbjct: 311 EALNISFGAGSYARKILKSMGWKEGEGLGNSTKGMVEPLEAVGNIGNAGIGWPRGIKKLD 350

Query: 412 TK 414
           TK
Sbjct: 371 TK 350

[Close]

BLAST of MS001894.1 vs. TAIR 10
Match: AT4G34140.3 (D111/G-patch domain-containing protein )

HSP 1 Score: 297.7 bits (761), Expect = 1.4e-80
Identity = 198/505 (39.21%), Postives = 256/505 (50.69%), Query Frame = 0


Query: 19  SFVWDENSRLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQFDQQ--------- 78
           S+VWD +++LY H SSGFYHDP AGWYY S+DG YYK ENG YV L++D+          
Sbjct: 16  SYVWDSDTQLYIHHSSGFYHDPNAGWYYCSKDGRYYKHENGEYVPLEYDESSVNPPGDIV 75

Query: 79  ---------GEECKTYLDNSVKGG-----------PCRQV-CNTDSE-DH---------- 138
                    G +C      +V+ G           P     C  D E +H          
Sbjct: 76  TYEPSEDDLGRKCAFSQAENVENGCEVSLSNPGETPSESTGCPNDQEPEHRQRPSSWVED 135

Query: 139 ----------------SSFE-ASKYDISKCK------ESDCDGLPLG------------- 198
                           SS+E AS  +   C+      + D + L  G             
Sbjct: 136 TLIELYLDGYNQHPSASSYERASGENNQDCQMLSANGDDDAEELEEGEWIPEEDFDPQEE 195

Query: 199 ------VSTDEDNWKAQYGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTRLVGR 258
                  S++E+ W AQYGQV     +T P++  VDLW+W  V E+R     +V RLVGR
Sbjct: 196 NFGEAAPSSEEERWLAQYGQVIESPGKTLPEIPSVDLWDWKLVCETREADNEQVARLVGR 255

Query: 259 LVRKSAKLHPSVSSNGTLLKTAPISEVHLDLVRVATGENCLVGKLPFCDDLNLLSGKIYK 318
           LVR+SA LHPSV S GTLLKTAPI E  L LVRV TG+                   +YK
Sbjct: 256 LVRQSANLHPSVVSGGTLLKTAPICEARLHLVRVRTGQ-------------------VYK 315

Query: 319 LHSPSKRYLASMSSFDSSNPTEDWGFPDLL------DRLPDLANNEAKVACTGTVSTA-- 378
           L +PS +YLAS+S +D+SNPT+DW FPD+       D        + K A   TV  +  
Sbjct: 316 LRNPSAKYLASLSVYDASNPTKDWEFPDISTEWQNPDTKRKAKKGKPKRASKLTVKPSEV 375

Query: 379 --------------VSTLGDKLLVSEKRSSQNL--------YRDRAAERRILHGGFGVGP 410
                         V    D  L  + R   N+        YRDRAAERR LHGG+GVGP
Sbjct: 376 DMIEEQETKREAKKVKPKTDCKLTVKPRDEVNMIEEQRSCSYRDRAAERRNLHGGYGVGP 435

[Close]

BLAST of MS001894.1 vs. TAIR 10
Match: AT4G34140.1 (D111/G-patch domain-containing protein )

HSP 1 Score: 290.8 bits (743), Expect = 1.7e-78
Identity = 199/534 (37.27%), Postives = 260/534 (48.69%), Query Frame = 0


Query: 19  SFVWDENSRLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQFDQQ--------- 78
           S+VWD +++LY H SSGFYHDP AGWYY S+DG YYK ENG YV L++D+          
Sbjct: 16  SYVWDSDTQLYIHHSSGFYHDPNAGWYYCSKDGRYYKHENGEYVPLEYDESSVNPPGDIV 75

Query: 79  ---------GEECKTYLDNSVKGG-----------PCRQV-CNTDSE-DH---------- 138
                    G +C      +V+ G           P     C  D E +H          
Sbjct: 76  TYEPSEDDLGRKCAFSQAENVENGCEVSLSNPGETPSESTGCPNDQEPEHRQRPSSWVED 135

Query: 139 ----------------SSFE-ASKYDISKCK------ESDCDGLPLG------------- 198
                           SS+E AS  +   C+      + D + L  G             
Sbjct: 136 TLIELYLDGYNQHPSASSYERASGENNQDCQMLSANGDDDAEELEEGEWIPEEDFDPQEE 195

Query: 199 ------VSTDEDNWKAQYGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTRLVGR 258
                  S++E+ W AQYGQV     +T P++  VDLW+W  V E+R     +V RLVGR
Sbjct: 196 NFGEAAPSSEEERWLAQYGQVIESPGKTLPEIPSVDLWDWKLVCETREADNEQVARLVGR 255

Query: 259 LVRKSAKLHPSVSSNGTLLKTAPISEVHLDLVRVATGENCLVGKLPFCDDLNLLSGKIYK 318
           LVR+SA LHPSV S GTLLKTAPI E  L LVRV TG+                   +YK
Sbjct: 256 LVRQSANLHPSVVSGGTLLKTAPICEARLHLVRVRTGQ-------------------VYK 315

Query: 319 LHSPSKRYLASMSSFDSSNPTEDWGFPDL------------------------------L 378
           L +PS +YLAS+S +D+SNPT+DW FPD+                              +
Sbjct: 316 LRNPSAKYLASLSVYDASNPTKDWEFPDISTEWQNPDTKRKAKKGKPKRASKLTVKPSEV 375

Query: 379 DRLPDLANNEA-----KVACTGTV----------------STAVSTLGDKLLVSEKRSSQ 410
           D + +    +A     K  C  TV                +  V    D  L  + R   
Sbjct: 376 DMIEEKTKRKAKKVKPKADCKLTVKPCEVDMFEEQETKREAKKVKPKTDCKLTVKPRDEV 435

[Close]

BLAST of MS001894.1 vs. TAIR 10
Match: AT4G34140.2 (D111/G-patch domain-containing protein )

HSP 1 Score: 288.5 bits (737), Expect = 8.5e-78
Identity = 198/534 (37.08%), Postives = 259/534 (48.50%), Query Frame = 0


Query: 19  SFVWDENSRLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQFDQQ--------- 78
           S+VWD +++LY H SSGFYHDP AGWYY S+DG YYK ENG YV L++D+          
Sbjct: 16  SYVWDSDTQLYIHHSSGFYHDPNAGWYYCSKDGRYYKHENGEYVPLEYDESSVNPPGDIV 75

Query: 79  ---------GEECKTYLDNSVKGG-----------PCRQV-CNTDSE-DH---------- 138
                    G +C      +V+ G           P     C  D E +H          
Sbjct: 76  TYEPSEDDLGRKCAFSQAENVENGCEVSLSNPGETPSESTGCPNDQEPEHRQRPSSWVED 135

Query: 139 ----------------SSFE-ASKYDISKCK------ESDCDGLPLG------------- 198
                           SS+E AS  +   C+      + D + L  G             
Sbjct: 136 TLIELYLDGYNQHPSASSYERASGENNQDCQMLSANGDDDAEELEEGEWIPEEDFDPQEE 195

Query: 199 ------VSTDEDNWKAQYGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTRLVGR 258
                  S++E+ W AQYGQV     +T P++  VDLW+W  V E+R     +V RLVGR
Sbjct: 196 NFGEAAPSSEEERWLAQYGQVIESPGKTLPEIPSVDLWDWKLVCETREADNEQVARLVGR 255

Query: 259 LVRKSAKLHPSVSSNGTLLKTAPISEVHLDLVRVATGENCLVGKLPFCDDLNLLSGKIYK 318
           LVR+SA LHPSV S GTLLKTAPI E  L LVRV TG+                   +YK
Sbjct: 256 LVRQSANLHPSVVSGGTLLKTAPICEARLHLVRVRTGQ-------------------VYK 315

Query: 319 LHSPSKRYLASMSSFDSSNPTEDWGFPDL------------------------------L 378
           L +PS +YLAS+S +D+SNPT+DW FPD+                              +
Sbjct: 316 LRNPSAKYLASLSVYDASNPTKDWEFPDISTEWQNPDTKRKAKKGKPKRASKLTVKPSEV 375

Query: 379 DRLPDLANN------EAKVACTGTV----------------STAVSTLGDKLLVSEKRSS 410
           D + +          + K  C  TV                +  V    D  L  + R  
Sbjct: 376 DMIEEQKTKRKAKKVKPKADCKLTVKPCEVDMFEEQETKREAKKVKPKTDCKLTVKPRDE 435

[Close]

BLAST of MS001894.1 vs. TAIR 10
Match: AT3G54230.1 (suppressor of abi3-5 )

HSP 1 Score: 60.1 bits (144), Expect = 4.9e-09
Identity = 103/439 (23.46%), Postives = 167/439 (38.04%), Query Frame = 0


Query: 20  FVWDENSRLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQFDQQGEECKTYLDN 79
           +VWDE S  Y+ ++SG+Y+D  +G YY S  G +Y           +DQQ ++   Y+  
Sbjct: 584 YVWDEASGYYYDAASGYYYDGNSGLYYDSNSGLWY----------SYDQQTQQ---YV-- 643

Query: 80  SVKGGPCRQVCNTDSEDHSSFEASKYDISKCKESDCDGLPLGVSTDEDNWK-------AQ 139
                PC      D  + S    ++ D +K ++S    + +  +T  +  K        Q
Sbjct: 644 -----PC-----PDQNNESKVTENQPDSAKKEKSSQQKVIISAATTPNVEKVLSLPDAVQ 703

Query: 140 YGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTRLVGRLVRKSAKLH-----PSV 199
                    E   K  V ++   S    S    K K++ ++    ++S +       PS+
Sbjct: 704 AAAAAAIASEKREKERVKEIKLAS--KTSLLASKKKMSNVLTMWKQRSHETQIQRPSPSL 763

Query: 200 SSNGTLLKTAPISEVHLDLVRVATGENCLVGKLPFCDDLNLLSGKIYKLHSPSKRYLASM 259
             N   +     S         +TG++  +GKL    D+ +   +    H  S    A  
Sbjct: 764 GDNPPTVSAEARSS-------FSTGQS--MGKLK--SDVIIAKERSTSNHGVSALTTAES 823

Query: 260 SSFDSSNPTEDWGFPDLLDRLPDLANNEAKV------ACTGTVSTAVSTLGDKLL----- 319
           SS  ++  T               A++ A V            S +VS  G +       
Sbjct: 824 SSSSTTGGTLMGVMRGSFGGTLGGASSSASVQMPPILPSASPASVSVSGSGRRRFSETPT 883

Query: 320 --VSEKRSSQNLYRDRAAERRILHGGFGVGPGQKNSAID-----------RGDLPSSPPS 379
              + +   Q  YRDRAAERR L+G         N  ID             D    PP 
Sbjct: 884 AGPTHREQPQTSYRDRAAERRNLYGS---STSSGNDVIDSSEDLMGLRKGSSDPTPFPPG 943

Query: 380 ----GCSESAAAEALDI-----SFGAGSYARKILKSMGWKEGEGLGNSTKGMVEPLEAVG 414
               G + S    + D+     +    +   ++L++MGW EG GLG    GM EP++A G
Sbjct: 944 VGGRGITTSTEVSSFDVITEERAIDESNVGNRMLRNMGWHEGSGLGKDGSGMKEPVQAQG 979

[Close]

BLAST of MS001894.1 vs. TAIR 10
Match: AT3G54230.2 (suppressor of abi3-5 )

HSP 1 Score: 60.1 bits (144), Expect = 4.9e-09
Identity = 103/439 (23.46%), Postives = 167/439 (38.04%), Query Frame = 0


Query: 20  FVWDENSRLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQFDQQGEECKTYLDN 79
           +VWDE S  Y+ ++SG+Y+D  +G YY S  G +Y           +DQQ ++   Y+  
Sbjct: 585 YVWDEASGYYYDAASGYYYDGNSGLYYDSNSGLWY----------SYDQQTQQ---YV-- 644

Query: 80  SVKGGPCRQVCNTDSEDHSSFEASKYDISKCKESDCDGLPLGVSTDEDNWK-------AQ 139
                PC      D  + S    ++ D +K ++S    + +  +T  +  K        Q
Sbjct: 645 -----PC-----PDQNNESKVTENQPDSAKKEKSSQQKVIISAATTPNVEKVLSLPDAVQ 704

Query: 140 YGQVTHYGEETTPKLSVVDLWEWSTVSESRPGGKGKVTRLVGRLVRKSAKLH-----PSV 199
                    E   K  V ++   S    S    K K++ ++    ++S +       PS+
Sbjct: 705 AAAAAAIASEKREKERVKEIKLAS--KTSLLASKKKMSNVLTMWKQRSHETQIQRPSPSL 764

Query: 200 SSNGTLLKTAPISEVHLDLVRVATGENCLVGKLPFCDDLNLLSGKIYKLHSPSKRYLASM 259
             N   +     S         +TG++  +GKL    D+ +   +    H  S    A  
Sbjct: 765 GDNPPTVSAEARSS-------FSTGQS--MGKLK--SDVIIAKERSTSNHGVSALTTAES 824

Query: 260 SSFDSSNPTEDWGFPDLLDRLPDLANNEAKV------ACTGTVSTAVSTLGDKLL----- 319
           SS  ++  T               A++ A V            S +VS  G +       
Sbjct: 825 SSSSTTGGTLMGVMRGSFGGTLGGASSSASVQMPPILPSASPASVSVSGSGRRRFSETPT 884

Query: 320 --VSEKRSSQNLYRDRAAERRILHGGFGVGPGQKNSAID-----------RGDLPSSPPS 379
              + +   Q  YRDRAAERR L+G         N  ID             D    PP 
Sbjct: 885 AGPTHREQPQTSYRDRAAERRNLYGS---STSSGNDVIDSSEDLMGLRKGSSDPTPFPPG 944

Query: 380 ----GCSESAAAEALDI-----SFGAGSYARKILKSMGWKEGEGLGNSTKGMVEPLEAVG 414
               G + S    + D+     +    +   ++L++MGW EG GLG    GM EP++A G
Sbjct: 945 VGGRGITTSTEVSSFDVITEERAIDESNVGNRMLRNMGWHEGSGLGKDGSGMKEPVQAQG 980

The following BLAST results are available for this feature:

BLAST of MS001894.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589431.1	6.8e-162	62.23	SUPPRESSOR OF ABI3-5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022921822.1	1.4e-159	59.92	SUPPRESSOR OF ABI3-5 isoform X4 [Cucurbita moschata]	[more]
XP_022921819.1	1.6e-158	58.91	uncharacterized protein LOC111429960 isoform X1 [Cucurbita moschata]	[more]
KAG7023111.1	2.1e-158	58.72	SUPPRESSOR OF ABI3-5 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022921821.1	8.6e-157	58.72	uncharacterized protein LOC111429960 isoform X3 [Cucurbita moschata]	[more]

BLAST of MS001894.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JCU0	6.9e-08	23.46	SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana OX=3702 GN=SUA PE=1 SV=2	[more]
A0JMV4	1.9e-05	31.58	RNA-binding protein 5-A OS=Xenopus laevis OX=8355 GN=rbm5-a PE=2 SV=1	[more]
Q1RMU5	2.5e-05	32.69	RNA-binding protein 5 OS=Bos taurus OX=9913 GN=RBM5 PE=2 SV=1	[more]
P52756	2.5e-05	32.69	RNA-binding protein 5 OS=Homo sapiens OX=9606 GN=RBM5 PE=1 SV=2	[more]
Q91YE7	2.5e-05	32.69	RNA-binding protein 5 OS=Mus musculus OX=10090 GN=Rbm5 PE=1 SV=1	[more]

BLAST of MS001894.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E1H5	6.9e-160	59.92	SUPPRESSOR OF ABI3-5 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111429960 PE...	[more]
A0A6J1E1M2	7.6e-159	58.91	uncharacterized protein LOC111429960 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1E6V8	4.2e-157	58.72	uncharacterized protein LOC111429960 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1E2F3	4.2e-157	58.72	uncharacterized protein LOC111429960 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1BZJ6	5.1e-147	91.06	uncharacterized protein LOC111007141 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of MS001894.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34140.3	1.4e-80	39.21	D111/G-patch domain-containing protein	[more]
AT4G34140.1	1.7e-78	37.27	D111/G-patch domain-containing protein	[more]
AT4G34140.2	8.5e-78	37.08	D111/G-patch domain-containing protein	[more]
AT3G54230.1	4.9e-09	23.46	suppressor of abi3-5	[more]
AT3G54230.2	4.9e-09	23.46	suppressor of abi3-5	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 358..404 e-value: 1.7E-10 score: 50.9
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 362..402 e-value: 1.1E-10 score: 41.2
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 360..406 score: 14.237107
IPR041591	OCRE domain	PFAM	PF17780	OCRE	coord: 17..62 e-value: 2.0E-12 score: 47.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 327..346
None	No IPR available	PANTHER	PTHR13948	RNA-BINDING PROTEIN	coord: 229..404
None	No IPR available	PANTHER	PTHR13948	RNA-BINDING PROTEIN	coord: 120..213
None	No IPR available	PANTHER	PTHR13948:SF38	D111/G-PATCH DOMAIN-CONTAINING PROTEIN	coord: 120..213 coord: 12..88
None	No IPR available	PANTHER	PTHR13948	RNA-BINDING PROTEIN	coord: 12..88
None	No IPR available	PANTHER	PTHR13948:SF38	D111/G-PATCH DOMAIN-CONTAINING PROTEIN	coord: 229..404
None	No IPR available	CDD	cd16074	OCRE	coord: 19..60 e-value: 4.03987E-13 score: 61.5315

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS001894	MS001894	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS001894.1-cds	MS001894.1-cds-scaffold30:777403..777500	CDS
MS001894.1-cds	MS001894.1-cds-scaffold30:778001..778106	CDS
MS001894.1-cds	MS001894.1-cds-scaffold30:778232..778388	CDS
MS001894.1-cds	MS001894.1-cds-scaffold30:780760..781046	CDS
MS001894.1-cds	MS001894.1-cds-scaffold30:781138..781167	CDS
MS001894.1-cds	MS001894.1-cds-scaffold30:781169..781390	CDS
MS001894.1-cds	MS001894.1-cds-scaffold30:781536..781760	CDS
MS001894.1-cds	MS001894.1-cds-scaffold30:781940..782053	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS001894.1	MS001894.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding