MS001241.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS001241.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Proteasome subunit beta
Location	scaffold36: 2588892 .. 2592853 (-)
Sequence length	705
RNA-Seq Expression	MS001241.1
Synteny	MS001241.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTTAACATGGATCTCAATGCTCCTCACTCCATGGGTACCACCATCATCGGCGTCACTTACGACGGCGGCGTCGTCCTCGGCGCCGATTCTCGTACCAGCACTGGTAAATTTCTCTCATCTACTCTGTAGCCCTAGTTTCTTAGCGTGCTAGTCTTCTTTTATACGAATATTATCTTCAAGAAACGTTTGAAATGATTAAATGCTAGTGGAGGGAAGTTGTAGTTTGTTTATTTTTAGTTTCTGATCTCTCGACCTTGGAAGCAAGTCATTTTATATCCATCAGACTTGGAATTAAGCTTGACATTAGTTGTTTTGAGTTTTTATGAGTAGATGTAATCATAGAAAGAGTTGGGTTCTCCCGTATTTTCCCCCCTGATTGACATCTAGTGACAGTAATTTGGTGAATTTTGTTGTTGGTTCAATCCTCTCTATGTAATCTCATGCATTTTTTCAGAACATTACATGGCTGAAATTTAGGCGGGCTTTTCCAAGCTTAGCTGCATAAAATGACATGCTTTACTAAAAACTATTTGTTTGCTTCCGAGATGGTTGCAGAAAAATTATGAATGGGATGCAATAAAAGAACTACATCCTTCACAAAATTATGTAGTGGAGGAAAAATTAACTTGTAAATAACAGCTACCAAATTATGTTTACATTAGCTTGTTGTCCTGAAACATTTTTTTTCCAACCCCGTAGCAATCTTGAATAACAAAATTACATTTGAAATGGTAAAATGAATCTTAGTTGGTTCTTTCCGGCCTTTTTTTGTATGTGCCTGCTTTCTTGTGCTGTGTTGATGTTGACTGATTTTTTATTTTCCTTGTGATAGGCGTCTATGTGGCTAATCGTGCATCAGACAAGATTACGAAGCTCTCTGACAACGTCTATGTTTGTCGATCTGGCTCGGTATTTCCATTTCTGTTATCTCACATATTGAACTGTCTGTCGATTTTGATGGTGAATAGGCTTCAATAGTTTTTGCTCTGGTTGGCTTTAATGTTCAGTTCTAGCCTTAAATTCTCAAGTTTTTTCTTTTAACTTCTCGTTCTATAATTAAAATGTGTAAGAGTGTCTCAGTTCATAGGTGTTTTCTCTTGTTTCATTAATGGTTTATTTTGTGCCTCTTGCAGGCTGCAGATTCTCAAATTGTCTCTGATTATGTGCGTCACTTCCTACATCAGCATACGTGAGTTCTTTAATTACTGAAAATGTTATGTTGCAACTTTGAAATGTTGGCTCAATGTAACTTGATCACTTCGAGCGATTTTATTTTTTGCTTGAATAATTGTGATTGATTTTGGAAGGATCTGATAGCAATTGCATTACTTTTCATCTGTTTTTCTCAGTGGTTTTCAATACTGTATGAAAGAGATACAATACTGTATGAAAGGAAAAAAATATTGAATGAAAGAGATAAAAATTCTTGTGTGTTATACAAATAATTTGACCCATGAATCAATGGGGAAGGTGTTGGAGGAAGAAGAATGATGACTTGATTTTTCCTTTACTTATTAAGATGATTGACCCATATGTTAACTAGATTGGTAAGGAAAATGCTCAGTGTATAGGTCACGTCGTCCTGATGATTAATGTTACAGCACTGGATATGCTTGATCTGGTAGGAATGTGTAATTTTGGATTCATTAAATATGGTTTTTATTTAGTACTTCTCTAGGTAAATGTACCTGTCTATCCGCCCTCTTTTTTTGAAATGATAAGTTATCTCAAAATATGAAAAAATTTCTGTTGTATAATCCATCTGAAAATATGTTGCTGCTTATAATCTTGATTTTGTTATTATTAATTTATTATTCTTTTTATTATTCAGTTTCAGAATTTTCTCTTTGTTGACAAGTCAATGAAGATGATTTGTACCCATTTCTGTGATTTCTGGTTTTAGTTTTCGTTAATATTAATTTATTTGATATAAGTAATGAAGCCACTTGAATTTATATACAACTTTTTACATGTTGAGCTCTTACTGATTGTATTTTACCTTTGATGCACAGGATACAGCTTGGCCAACCTGCAACTGTTAAAGTGGCTGCAAACCTCGTCAGGCTATTATCATATAACAACAAGGTAGGAGCTCATATTAGTTTGTTCAGAATTATTGCCTGGTAAACATGTATAAATATTTTGGATAAGAAACTCAAACAATAACATTTCATTGAAAGATTGCAAATTGTCCCAATCCAGCCAAAAGAGTTAGAAAAAAGCTATCCAATTTGCCAAAATCATGGAAATAGAATAATCACATATAGCAAGACAGGAGAAACCTTTTCTTTCATAGAAAATCCTATTGTTTCTTTCCAACCAGGGCCCATAAAATAGCCAAAATCATATTGATCCATAGGATCCTTCTCTTTTCTCTGAAAGGGCGACTGCCATACGACCTGTTGAAGCTGCTAGTCCAAGCTCGACATTAAGATTTGCCTGTTTATGGGCAGTAGCAATGGCTTTGATCCCCAAAGTGTTGGCATTTTCTATGTTGAGTGTGGCCATAATCTTGTTCTTGATTCAAATTGAACCCATGCTTTAACATCAATGTCATTTGGTCGAATGGGCAGGATATGTTACAAACTGGCCTTATTGTTGGTGGATGGGACAAGTATGAAGGTGGTCGAATCTATGGTATTCCTCTTGGTGGAACAATAATAGAGCAGCCATTTGCTATTGGAGGTAAAACCTTTTTTGCCAATTGCTTATAGCAAATAACGAGGTTTGGTGACTCTTTTTTTTTTTTCCTGGTATCCTTGTGCTTTCTTTTTACTTATGTGTTTATATGCAAGTTTTATGATATGATCTTCTGCTTTAGCATCCTTGAATGAATGAATTGTATTTGGTTTTTCATGATCCTGAATCTGGTTCTTGTTAAACTGAACCCATATAGGGTTCTCAAGCATGGAAGTGCTTTAGTCAAGAAAATATCCTCCTACATTTTTCTTTTGGATATTAGATGTCTGACATTTGCTGTTAAAATCCTATGTTCTCTGGTTGCAAGTATGACCACGACCTGTTTCCACTTGTTATTCTACAGGATCTGGCTCCAGTTACTTGTATGGATTTTTTGATCAAGCTTGGAGAGAAGGAATGACCAGGGAAGAAGCTGAGGTATTTGTATACTACTATTATTTTTTGATTAAAGGTTCTGCATTATTATGCTTCTTGCTTGCTGACAATATTATTTTCTGAGTACTTTCTTTTGGGCTCGGACCATTACTAAATGTATGATTATTTACCTGTTCTTCATTCCTCATAGTTGGAAGTTTACCTGTAAGAGACTTTATTTTTAGTAGTTAGGACTTTTAAGAAACGTTGTAAAATACTTTCTTTTTCTTTTAATAAGTACTTTTGAAGGAAGCACTAATTAAGTAAAATACTTAAAGTTGAGCAGTTACTTCTTTTTCTCTTAGCACTCTCAAGTGCAATACTTCTCTCTAACCACTTTAAAGGAAGCACTAATTAAGATGCAAACTTTGAGGCAAAAGATTGAATTCTATGCACACTTCCTATGGCTAAAGCAAATCGGCTGAGCTTACTTTCTGTCTATTTTTTCATATTCGGTGCAAGAGATTTACTGGTTACACTCCATCGATAGGATTATTTTTCTGATTGTTTACTGTCATTTGCAGCAATTGGTGGTCAAGGCGGTTTCTCTTGCCATAGCCAGAGATGGTGCTAGTGGTGGTGTTGTTCGTACTGTTACTGTAAGATAATGTCCTTTTATCACAAAATCTGTTACTTTACTTTAAAACAAGTACACGTACAATCCATTGTTCTTGTTGCGAAGAAGCGTAGTGTAAACTCGGGCATTTTTGCAGATAAATTCCGAGGGAGTGACAAGAAAATTCTATCCTGGGGACCAGCTTCCGCTGTGGCACGAGGAAATAGAGCCTAAAAATTCATTGCTGGATGTTCTGAATGCTTCTAGTCCCGAACCGATGAACATA

mRNA sequence

ATGGATCTTAACATGGATCTCAATGCTCCTCACTCCATGGGTACCACCATCATCGGCGTCACTTACGACGGCGGCGTCGTCCTCGGCGCCGATTCTCGTACCAGCACTGGCGTCTATGTGGCTAATCGTGCATCAGACAAGATTACGAAGCTCTCTGACAACGTCTATGTTTGTCGATCTGGCTCGGCTGCAGATTCTCAAATTGTCTCTGATTATGTGCGTCACTTCCTACATCAGCATACGATACAGCTTGGCCAACCTGCAACTGTTAAAGTGGCTGCAAACCTCGTCAGGCTATTATCATATAACAACAAGGATATGTTACAAACTGGCCTTATTGTTGGTGGATGGGACAAGTATGAAGGTGGTCGAATCTATGGTATTCCTCTTGGTGGAACAATAATAGAGCAGCCATTTGCTATTGGAGGATCTGGCTCCAGTTACTTGTATGGATTTTTTGATCAAGCTTGGAGAGAAGGAATGACCAGGGAAGAAGCTGAGCAATTGGTGGTCAAGGCGGTTTCTCTTGCCATAGCCAGAGATGGTGCTAGTGGTGGTGTTGTTCGTACTGTTACTATAAATTCCGAGGGAGTGACAAGAAAATTCTATCCTGGGGACCAGCTTCCGCTGTGGCACGAGGAAATAGAGCCTAAAAATTCATTGCTGGATGTTCTGAATGCTTCTAGTCCCGAACCGATGAACATA

Coding sequence (CDS)

ATGGATCTTAACATGGATCTCAATGCTCCTCACTCCATGGGTACCACCATCATCGGCGTCACTTACGACGGCGGCGTCGTCCTCGGCGCCGATTCTCGTACCAGCACTGGCGTCTATGTGGCTAATCGTGCATCAGACAAGATTACGAAGCTCTCTGACAACGTCTATGTTTGTCGATCTGGCTCGGCTGCAGATTCTCAAATTGTCTCTGATTATGTGCGTCACTTCCTACATCAGCATACGATACAGCTTGGCCAACCTGCAACTGTTAAAGTGGCTGCAAACCTCGTCAGGCTATTATCATATAACAACAAGGATATGTTACAAACTGGCCTTATTGTTGGTGGATGGGACAAGTATGAAGGTGGTCGAATCTATGGTATTCCTCTTGGTGGAACAATAATAGAGCAGCCATTTGCTATTGGAGGATCTGGCTCCAGTTACTTGTATGGATTTTTTGATCAAGCTTGGAGAGAAGGAATGACCAGGGAAGAAGCTGAGCAATTGGTGGTCAAGGCGGTTTCTCTTGCCATAGCCAGAGATGGTGCTAGTGGTGGTGTTGTTCGTACTGTTACTATAAATTCCGAGGGAGTGACAAGAAAATTCTATCCTGGGGACCAGCTTCCGCTGTGGCACGAGGAAATAGAGCCTAAAAATTCATTGCTGGATGTTCTGAATGCTTCTAGTCCCGAACCGATGAACATA

Protein sequence

MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKYEGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI

Homology

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BLAST of MS001241.1 vs. NCBI nr
Match: XP_038883996.1 (proteasome subunit beta type-6 [Benincasa hispida])

HSP 1 Score: 467.6 bits (1202), Expect = 6.2e-128
Identity = 230/235 (97.87%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTYDGGV+LGADSRTSTGVYVANRASDKITKL+DNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVILGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLL+YNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120

Query: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
           EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAW+EGMTREEAEQLVVKAVSLAIAR
Sbjct: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTREEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 236
           DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEE+EPKNSLLDVLNASSPEPMNI
Sbjct: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNI 235

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BLAST of MS001241.1 vs. NCBI nr
Match: XP_022132123.1 (proteasome subunit beta type-6 [Momordica charantia])

HSP 1 Score: 467.6 bits (1202), Expect = 6.2e-128
Identity = 232/235 (98.72%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKL+DNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120

Query: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
           +GGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGM REEAEQLVVKAVSLAIAR
Sbjct: 121 DGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMIREEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 236
           DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI
Sbjct: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 235

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BLAST of MS001241.1 vs. NCBI nr
Match: XP_022962546.1 (proteasome subunit beta type-6-like [Cucurbita moschata] >XP_023545809.1 proteasome subunit beta type-6-like [Cucurbita pepo subsp. pepo] >KAG7029736.1 Proteasome subunit beta type-6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 466.8 bits (1200), Expect = 1.1e-127
Identity = 230/235 (97.87%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKL+DNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLL+YNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120

Query: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
            GGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR
Sbjct: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 236
           DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEE+EPKNSLLDVLNASSPEPMN+
Sbjct: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235

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BLAST of MS001241.1 vs. NCBI nr
Match: XP_022996805.1 (proteasome subunit beta type-6-like [Cucurbita maxima])

HSP 1 Score: 464.9 bits (1195), Expect = 4.0e-127
Identity = 229/235 (97.45%), Postives = 233/235 (99.15%), Query Frame = 0


Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKL+DNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLL+YNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120

Query: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
            GGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR
Sbjct: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 236
           DGASGGVVRTVTINSEGV RKFYPGDQLPLWHEE+EPKNSLLDVLNASSPEPMN+
Sbjct: 181 DGASGGVVRTVTINSEGVARKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235

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BLAST of MS001241.1 vs. NCBI nr
Match: XP_022951437.1 (proteasome subunit beta type-6 [Cucurbita moschata] >XP_023002488.1 proteasome subunit beta type-6 [Cucurbita maxima] >XP_023537465.1 proteasome subunit beta type-6 [Cucurbita pepo subsp. pepo] >KAG7020325.1 Proteasome subunit beta type-6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 463.4 bits (1191), Expect = 1.2e-126
Identity = 228/235 (97.02%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTY+GGVVLGADSRTSTGVYVANRASDKITKL+DNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLL+YNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120

Query: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
           EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAW+EGMTR+EAEQLVVKAVSLAIAR
Sbjct: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTRDEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 236
           DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEE+EPKNSLLD LNASSPEPMNI
Sbjct: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDALNASSPEPMNI 235

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BLAST of MS001241.1 vs. ExPASy Swiss-Prot
Match: Q8LD27 (Proteasome subunit beta type-6 OS=Arabidopsis thaliana OX=3702 GN=PBA1 PE=1 SV=2)

HSP 1 Score: 419.9 bits (1078), Expect = 2.0e-116
Identity = 202/233 (86.70%), Postives = 225/233 (96.57%), Query Frame = 0


Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRS 60
           MDLN+D  APHSMGTTIIGVTY+GGVVLGADSRTSTG+YVANRASDKIT+L+DNVYVCRS
Sbjct: 1   MDLNLD--APHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120
           GSAADSQ+VSDYVR+FLHQHTIQ GQPATVKV+ANL+R+L+YNNK+MLQTGLIVGGWDKY
Sbjct: 61  GSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKY 120

Query: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
           EGG+IYGIPLGGT++EQPFAIGGSGSSYLYGFFDQAW++ MT+EEAEQLVVKAVSLAIAR
Sbjct: 121 EGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPM 234
           DGASGGVVRTV INSEGVTR FYPGD+L LWHEE+EP+NSLLD+LNA+ PEPM
Sbjct: 181 DGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPM 231

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BLAST of MS001241.1 vs. ExPASy Swiss-Prot
Match: P93395 (Proteasome subunit beta type-6 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.0e-112
Identity = 198/230 (86.09%), Postives = 216/230 (93.91%), Query Frame = 0


Query: 4   NMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRSGSA 63
           N D++ PHSMGTTIIGVTY+GGVVLGADSRTSTG+YVANRASDKIT+L+DNVYVCRSGSA
Sbjct: 3   NTDVDQPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSA 62

Query: 64  ADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKYEGG 123
           ADSQIVSDYVR+FLHQHTIQLGQPATVKVAANL RLLSYNNKD LQTG+I+GGWDKYEGG
Sbjct: 63  ADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLTRLLSYNNKDRLQTGMIIGGWDKYEGG 122

Query: 124 RIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGA 183
           +IYGIP GGT++EQPFAIGGSGSSYLYGFFDQAW+EGMT+EEAE+LVV AVSLAIARDGA
Sbjct: 123 KIYGIPPGGTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARDGA 182

Query: 184 SGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPM 234
           SGGVVRTVTIN +G TRKFY GD L LWHEE+EP NSLLDV+ ASSP PM
Sbjct: 183 SGGVVRTVTINKDGATRKFYSGDSLQLWHEELEPVNSLLDVVFASSPVPM 232

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BLAST of MS001241.1 vs. ExPASy Swiss-Prot
Match: Q55GJ6 (Proteasome subunit beta type-6 OS=Dictyostelium discoideum OX=44689 GN=psmB6 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.4e-60
Identity = 106/201 (52.74%), Postives = 152/201 (75.62%), Query Frame = 0


Query: 13  MGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRSGSAADSQIVSDY 72
           +GT+I+ V YDGGV++GADSRT+TG Y+ANR ++KIT + + +Y CRSGSAAD+Q +SDY
Sbjct: 13  LGTSIMAVEYDGGVIMGADSRTTTGAYIANRVTNKITPIHERIYCCRSGSAADTQAISDY 72

Query: 73  VRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKYEGGRIYGIPLGG 132
           VR++L  HT +L     VK AA+L +LL Y+NK+ L  G+IV GWDK++GG +Y I LGG
Sbjct: 73  VRYYLEMHTSELCDEPDVKTAASLFQLLCYSNKNNLMAGIIVAGWDKHQGGSVYNISLGG 132

Query: 133 TIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGASGGVVRTVT 192
           ++++QPFAIGGSGS+Y+YG+ D  ++  MT++E  + V  +++LA+ RDG+SGGV+R   
Sbjct: 133 SMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDECIEFVQNSLALAMFRDGSSGGVIRLCI 192

Query: 193 INSEGVTRKFYPGDQLPLWHE 214
           I+  GV RK  PG+ LP + E
Sbjct: 193 IDKNGVERKMIPGNNLPRFWE 213

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BLAST of MS001241.1 vs. ExPASy Swiss-Prot
Match: Q3MHN0 (Proteasome subunit beta type-6 OS=Bos taurus OX=9913 GN=PSMB6 PE=1 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.4e-58
Identity = 106/202 (52.48%), Postives = 145/202 (71.78%), Query Frame = 0


Query: 8   NAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRSGSAADSQ 67
           N   S GTTI+ V +DGGVVLGADSRT+TG Y+ANR +DK+T + D ++ CRSGSAAD+Q
Sbjct: 28  NREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQ 87

Query: 68  IVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKYEGGRIYG 127
            V+D V + L  H+I+L +P  V  AA+L + + Y  ++ L  G+I+ GWD  EGG++Y 
Sbjct: 88  AVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYS 147

Query: 128 IPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGASGGV 187
           +P+GG ++ QPFAIGGSGSSY+YG+ D  +REGMT+EE  Q    A++LA+ RDG+SGGV
Sbjct: 148 VPMGGMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGV 207

Query: 188 VRTVTINSEGVTRKFYPGDQLP 210
           +R   I   GV R+   GDQ+P
Sbjct: 208 IRLAAIAEPGVERQVLLGDQIP 229

[Close]

BLAST of MS001241.1 vs. ExPASy Swiss-Prot
Match: P28073 (Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3)

HSP 1 Score: 224.2 bits (570), Expect = 1.6e-57
Identity = 104/202 (51.49%), Postives = 145/202 (71.78%), Query Frame = 0


Query: 8   NAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRSGSAADSQ 67
           N   S GTTI+ V +DGGVVLGADSRT+TG Y+ANR +DK+T + D+++ CRSGSAAD+Q
Sbjct: 27  NREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQ 86

Query: 68  IVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKYEGGRIYG 127
            V+D V + L  H+I+L +P  V  AA+L + + Y  ++ L  G+I+ GWD  EGG++Y 
Sbjct: 87  AVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYS 146

Query: 128 IPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGASGGV 187
           +P+GG ++ Q FAIGGSGSSY+YG+ D  +REGMT++E  Q    A++LA+ RDG+SGGV
Sbjct: 147 VPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGV 206

Query: 188 VRTVTINSEGVTRKFYPGDQLP 210
           +R   I   GV R+   GDQ+P
Sbjct: 207 IRLAAIQQSGVERQVLLGDQIP 228

[Close]

BLAST of MS001241.1 vs. ExPASy TrEMBL
Match: A0A6J1BVE0 (Proteasome subunit beta OS=Momordica charantia OX=3673 GN=LOC111005067 PE=3 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.0e-128
Identity = 232/235 (98.72%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKL+DNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120

Query: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
           +GGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGM REEAEQLVVKAVSLAIAR
Sbjct: 121 DGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMIREEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 236
           DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI
Sbjct: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 235

[Close]

BLAST of MS001241.1 vs. ExPASy TrEMBL
Match: A0A6J1HDK0 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111462944 PE=3 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 5.2e-128
Identity = 230/235 (97.87%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKL+DNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLL+YNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120

Query: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
            GGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR
Sbjct: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 236
           DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEE+EPKNSLLDVLNASSPEPMN+
Sbjct: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235

[Close]

BLAST of MS001241.1 vs. ExPASy TrEMBL
Match: A0A6J1K7T1 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111491932 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.0e-127
Identity = 229/235 (97.45%), Postives = 233/235 (99.15%), Query Frame = 0


Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKL+DNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLL+YNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120

Query: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
            GGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR
Sbjct: 121 NGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 236
           DGASGGVVRTVTINSEGV RKFYPGDQLPLWHEE+EPKNSLLDVLNASSPEPMN+
Sbjct: 181 DGASGGVVRTVTINSEGVARKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235

[Close]

BLAST of MS001241.1 vs. ExPASy TrEMBL
Match: A0A6J1KTP7 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111496312 PE=3 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 5.7e-127
Identity = 228/235 (97.02%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTY+GGVVLGADSRTSTGVYVANRASDKITKL+DNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLL+YNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120

Query: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
           EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAW+EGMTR+EAEQLVVKAVSLAIAR
Sbjct: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTRDEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 236
           DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEE+EPKNSLLD LNASSPEPMNI
Sbjct: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDALNASSPEPMNI 235

[Close]

BLAST of MS001241.1 vs. ExPASy TrEMBL
Match: A0A6J1GHL6 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111454253 PE=3 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 5.7e-127
Identity = 228/235 (97.02%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRS 60
           MDLNMDLNAPHSMGTTIIGVTY+GGVVLGADSRTSTGVYVANRASDKITKL+DNVYVCRS
Sbjct: 1   MDLNMDLNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120
           GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLL+YNNKDMLQTGLIVGGWDKY
Sbjct: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKY 120

Query: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
           EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAW+EGMTR+EAEQLVVKAVSLAIAR
Sbjct: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTRDEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 236
           DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEE+EPKNSLLD LNASSPEPMNI
Sbjct: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDALNASSPEPMNI 235

[Close]

BLAST of MS001241.1 vs. TAIR 10
Match: AT4G31300.1 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 419.9 bits (1078), Expect = 1.4e-117
Identity = 202/233 (86.70%), Postives = 225/233 (96.57%), Query Frame = 0


Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRS 60
           MDLN+D  APHSMGTTIIGVTY+GGVVLGADSRTSTG+YVANRASDKIT+L+DNVYVCRS
Sbjct: 1   MDLNLD--APHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120
           GSAADSQ+VSDYVR+FLHQHTIQ GQPATVKV+ANL+R+L+YNNK+MLQTGLIVGGWDKY
Sbjct: 61  GSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKY 120

Query: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
           EGG+IYGIPLGGT++EQPFAIGGSGSSYLYGFFDQAW++ MT+EEAEQLVVKAVSLAIAR
Sbjct: 121 EGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPM 234
           DGASGGVVRTV INSEGVTR FYPGD+L LWHEE+EP+NSLLD+LNA+ PEPM
Sbjct: 181 DGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPM 231

[Close]

BLAST of MS001241.1 vs. TAIR 10
Match: AT4G31300.3 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 419.9 bits (1078), Expect = 1.4e-117
Identity = 202/233 (86.70%), Postives = 225/233 (96.57%), Query Frame = 0


Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRS 60
           MDLN+D  APHSMGTTIIGVTY+GGVVLGADSRTSTG+YVANRASDKIT+L+DNVYVCRS
Sbjct: 1   MDLNLD--APHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKY 120
           GSAADSQ+VSDYVR+FLHQHTIQ GQPATVKV+ANL+R+L+YNNK+MLQTGLIVGGWDKY
Sbjct: 61  GSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKY 120

Query: 121 EGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIAR 180
           EGG+IYGIPLGGT++EQPFAIGGSGSSYLYGFFDQAW++ MT+EEAEQLVVKAVSLAIAR
Sbjct: 121 EGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIAR 180

Query: 181 DGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPM 234
           DGASGGVVRTV INSEGVTR FYPGD+L LWHEE+EP+NSLLD+LNA+ PEPM
Sbjct: 181 DGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPM 231

[Close]

BLAST of MS001241.1 vs. TAIR 10
Match: AT4G31300.2 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 415.2 bits (1066), Expect = 3.4e-116
Identity = 202/234 (86.32%), Postives = 225/234 (96.15%), Query Frame = 0


Query: 1   MDLNMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRS 60
           MDLN+D  APHSMGTTIIGVTY+GGVVLGADSRTSTG+YVANRASDKIT+L+DNVYVCRS
Sbjct: 1   MDLNLD--APHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRS 60

Query: 61  GSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNK-DMLQTGLIVGGWDK 120
           GSAADSQ+VSDYVR+FLHQHTIQ GQPATVKV+ANL+R+L+YNNK +MLQTGLIVGGWDK
Sbjct: 61  GSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKQNMLQTGLIVGGWDK 120

Query: 121 YEGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIA 180
           YEGG+IYGIPLGGT++EQPFAIGGSGSSYLYGFFDQAW++ MT+EEAEQLVVKAVSLAIA
Sbjct: 121 YEGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIA 180

Query: 181 RDGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPM 234
           RDGASGGVVRTV INSEGVTR FYPGD+L LWHEE+EP+NSLLD+LNA+ PEPM
Sbjct: 181 RDGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPM 232

[Close]

BLAST of MS001241.1 vs. TAIR 10
Match: AT5G40580.1 (20S proteasome beta subunit PBB2 )

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-23
Identity = 65/184 (35.33%), Postives = 104/184 (56.52%), Query Frame = 0


Query: 7   LNAPHSM--GTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRSGSAA 66
           L AP  +  GTTI+G+ +  GV+LGAD+R + G  VA++  +KI  ++ N+Y C +G+AA
Sbjct: 30  LKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAA 89

Query: 67  DSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKYEGGR 126
           D++ V+D V   L  H  Q G+ + V  A  L++   ++ +  +   L++GG D   G  
Sbjct: 90  DTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVD-ITGPH 149

Query: 127 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGAS 186
           ++ I   G+    PFA  GSGS      F+  ++EG+TR+E  +LV +A+   I  D  S
Sbjct: 150 LHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGS 209

Query: 187 GGVV 189
           G  V
Sbjct: 210 GSNV 212

[Close]

BLAST of MS001241.1 vs. TAIR 10
Match: AT5G40580.2 (20S proteasome beta subunit PBB2 )

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-23
Identity = 65/184 (35.33%), Postives = 104/184 (56.52%), Query Frame = 0


Query: 7   LNAPHSM--GTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLSDNVYVCRSGSAA 66
           L AP  +  GTTI+G+ +  GV+LGAD+R + G  VA++  +KI  ++ N+Y C +G+AA
Sbjct: 30  LKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAA 89

Query: 67  DSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKYEGGR 126
           D++ V+D V   L  H  Q G+ + V  A  L++   ++ +  +   L++GG D   G  
Sbjct: 90  DTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVD-ITGPH 149

Query: 127 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGAS 186
           ++ I   G+    PFA  GSGS      F+  ++EG+TR+E  +LV +A+   I  D  S
Sbjct: 150 LHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGS 209

Query: 187 GGVV 189
           G  V
Sbjct: 210 GSNV 212

The following BLAST results are available for this feature:

BLAST of MS001241.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883996.1	6.2e-128	97.87	proteasome subunit beta type-6 [Benincasa hispida]	[more]
XP_022132123.1	6.2e-128	98.72	proteasome subunit beta type-6 [Momordica charantia]	[more]
XP_022962546.1	1.1e-127	97.87	proteasome subunit beta type-6-like [Cucurbita moschata] >XP_023545809.1 proteas...	[more]
XP_022996805.1	4.0e-127	97.45	proteasome subunit beta type-6-like [Cucurbita maxima]	[more]
XP_022951437.1	1.2e-126	97.02	proteasome subunit beta type-6 [Cucurbita moschata] >XP_023002488.1 proteasome s...	[more]

BLAST of MS001241.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LD27	2.0e-116	86.70	Proteasome subunit beta type-6 OS=Arabidopsis thaliana OX=3702 GN=PBA1 PE=1 SV=2	[more]
P93395	1.0e-112	86.09	Proteasome subunit beta type-6 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q55GJ6	3.4e-60	52.74	Proteasome subunit beta type-6 OS=Dictyostelium discoideum OX=44689 GN=psmB6 PE=...	[more]
Q3MHN0	2.4e-58	52.48	Proteasome subunit beta type-6 OS=Bos taurus OX=9913 GN=PSMB6 PE=1 SV=1	[more]
P28073	1.6e-57	51.49	Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3	[more]

BLAST of MS001241.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BVE0	3.0e-128	98.72	Proteasome subunit beta OS=Momordica charantia OX=3673 GN=LOC111005067 PE=3 SV=1	[more]
A0A6J1HDK0	5.2e-128	97.87	Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111462944 PE=3 SV=1	[more]
A0A6J1K7T1	2.0e-127	97.45	Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111491932 PE=3 SV=1	[more]
A0A6J1KTP7	5.7e-127	97.02	Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111496312 PE=3 SV=1	[more]
A0A6J1GHL6	5.7e-127	97.02	Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111454253 PE=3 SV=1	[more]

BLAST of MS001241.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31300.1	1.4e-117	86.70	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]
AT4G31300.3	1.4e-117	86.70	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]
AT4G31300.2	3.4e-116	86.32	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]
AT5G40580.1	1.2e-23	35.33	20S proteasome beta subunit PBB2	[more]
AT5G40580.2	1.2e-23	35.33	20S proteasome beta subunit PBB2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000243	Peptidase T1A, proteasome beta-subunit	PRINTS	PR00141	PROTEASOME	coord: 22..37 score: 58.81 coord: 154..165 score: 44.7 coord: 179..190 score: 58.33 coord: 143..154 score: 66.29
IPR001353	Proteasome, subunit alpha/beta	PFAM	PF00227	Proteasome	coord: 13..193 e-value: 8.9E-47 score: 159.0
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 15..214 e-value: 7.4E-64 score: 216.9
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 10..216
None	No IPR available	PIRSR	PIRSR600243-1	PIRSR600243-1	coord: 9..217 e-value: 9.9E-66 score: 219.2
None	No IPR available	PANTHER	PTHR11599:SF151	PROTEASOME SUBUNIT BETA	coord: 7..233
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 7..233
None	No IPR available	CDD	cd03762	proteasome_beta_type_6	coord: 15..202 e-value: 1.52134E-120 score: 338.815
IPR016050	Proteasome beta-type subunit, conserved site	PROSITE	PS00854	PROTEASOME_BETA_1	coord: 18..65
IPR023333	Proteasome B-type subunit	PROSITE	PS51476	PROTEASOME_BETA_2	coord: 14..193 score: 48.731953

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS001241	MS001241	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS001241.1-cds	MS001241.1-cds-scaffold36:2588892..2589020	CDS
MS001241.1-cds	MS001241.1-cds-scaffold36:2589135..2589209	CDS
MS001241.1-cds	MS001241.1-cds-scaffold36:2589731..2589804	CDS
MS001241.1-cds	MS001241.1-cds-scaffold36:2590163..2590274	CDS
MS001241.1-cds	MS001241.1-cds-scaffold36:2590763..2590835	CDS
MS001241.1-cds	MS001241.1-cds-scaffold36:2591659..2591714	CDS
MS001241.1-cds	MS001241.1-cds-scaffold36:2591939..2592015	CDS
MS001241.1-cds	MS001241.1-cds-scaffold36:2592745..2592853	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS001241.1	MS001241.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
cellular_component	GO:0005839	proteasome core complex
molecular_function	GO:0004298	threonine-type endopeptidase activity