MS001225.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS001225.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transmembrane protein
Location	scaffold36: 2434385 .. 2437118 (+)
Sequence length	876
RNA-Seq Expression	MS001225.1
Synteny	MS001225.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATTATTGGAGACGCACTTCGCCAGGCGTTCATGCCAAAGCACGAGTATGAGAACCTCCGCGAAGAAGAAAAAACTTGGGGCAAGCTTCAGAAACCGTTGGTTATGGCTCTCGTGGCTTTGATAGGGCTCGCAATTATTGTATGCACTACTATTAGTCTGAACATAGTCTTCCCCAACGACATCGCAAATAGACCATTCTGCAACGACAGGAGGCTTCAGCCTCTCCCCGTAAATGGAAAAGGAGGCGAATCTGATTTTGTTCTTGGAGCTTTTTATCTCACGAATCAAGAAATCGTGGACTATTATTGGATGCTCGTGTTCATCCCCTCAGTAGTCGCATTTGCTGCATCGGTTGTCTATCTTGTTGCGGGTAAGCGGCATTTATTATACTCTTTTAGGCATTAGCAGGAGATTTTGGATCCGCGATTATGAGAGTCCATTGGTTTTGGCTCAATTAATAAGATTTTGACTTCTTTTAAGTGAGTTTAAGAAGTAGGGACTTGTTTTTGATTATGAAAGATTTTGACTTGTTGCTCGGGAGTTGAATTTGACTAATTTCTGCAGTGGGTTAAGATCGAGACTTGGAAAGTTACTTGTAGTAGAGGTAGGTTGGTTTAAACGTGTCTGTGAAAATACATAGTCATCAATATGTGATTTGTCGATGTGTGGACCATTCCCTATTTGCAGTTAAATGTATGCATCAACAAATCTTCATGGTTTCTGGTTAGCTATTTCAATTAGAATTGTCCCTACACAACAAAGCTAGTTGATGAAAATTTGCGTCAATGGTTTTCAGCTATATGCCAAGCCTGCACCCTACATAACTTCCGTTCAAGAGGTCCATCATATATTTTTCAGATATAAGAGTCTTTTGTATTATGTTTTTTCTTTAAACCTGCCGAGGATAAACCAAATACCAGTTAGAGGAGAGTTATGCGATTACTTTAATAGCAGAGGAAGCAATGGTACCAGAAATAAAAGTCTGAATATCTTCTTCTTTATCTATTGGTATTGGCTGTTTAGAGTTTTCTCTCCTAGTTAATTTTTTACGTATTCTTTCGATGGTGCCAAATGATATAACAGACAAGATGGGTTGTCATCTCTACGCAAGAGGACAATCCTTTATCTGTAGGAGGAATCATGCCAATTTCTATTTTTTTAGCTTACTCGCCCCTTAAGATTCCTAAGTTTCCTTCTTTCTTTACAATCAAGCTGCTTTTGTTCTGAGTCACTTCTGATGTTTAGTTTGAAACTTTGTTGGAGTTTAGATTTTTACCTCTATGGCTGCATGTTTGCCCATTGGTATGTGTTGCACTCTACCATAGAAAAAAATCTTCGAAAATGTTACACTCTCTTTTACATGCTCCAACTTCCAAACTCTTAAGCGGCATGCTGGTCACATATTTATAATCATGATTTGCAAAATCAGACTTCAGGCTTTGTTTGAATTCTACCAATTTCTTTTATGATGTGTTTGGTTAATTGAACATTGTTGAAGGGTGCAATTATCAAGAAAGTTGTTTTGGGGTTAGTATGAAGTATCTGCTATCTACTTAATTAATTAACGTATATTGCAGGCATAATTGTTGCTTATTCTGCTCCAACTAGACACGGTTGCTTGAAAGTAGTTGAGAATAGCTACTGTGCATCCAGAAGAGGTAAAGCCCTATCTTCTCTCGTGGTTGGCTGCTTTAAGTTCTTGTGCTGTTTGTCATCATTGATTTTGGATGTTATAAAAGAAGGAAAGTATGATAGTTTAAAAGCTTTCTGAGTTCGGATTTTCTTTAGCTGCTTTTAGTCGACTTTTAGTTACTAAAAGAAAAAAGAAGTTCTATTTATCGATTTGTATGAAGTTATTTTTAGAAATAATACAAGATTTTCCACACTGCTAAGTGGAATAACTAAATATATAATGCTCTCCCCTGGTCGGCTGCTTTCACATTCCGTCTTCTTCTAGTTATGGTTAAGTGGAAGGTTTGATGGTTTCCAGTTTTCAGTTTCCTCTATTTCTCCCCGGTCACATACACATACTGAACACACCCCCACCTGCTAAAGGATTGGTGCCCTTAATTCTTTTTTGTCATTTAAACTGGATGTATATCATTATGAAATTTTCTTTTTACCGGAGAAAAGAGGCAAACAACAACCCTTCAAATTTCACACTCATGCCATCTAAGCAACTATATTGTGTTCTATTAAGTTATAATAAATATAATAATGTAAAAGAAATTCTGTATGACTGTCTTTATAATTGCTTTGTAAATGCCCAATTTTTCATATGTATATTTATTTTCTGTTGCTATTTGTAGGTGGAGTTCGCTGTCTTACCATCTTGAATGTTGTTTTTGCCATCATCTTTGGCCTTTTGGCGCTATTTCTTGGTTCAAGTCTTCTCACCTTGGGTGGGAGCTGCGCAGTGCCCCTGTTTTGGTGTTATGAGATCACATCATGGGGTCTAGTTATTCTCTATGGAGGAACTGCATTCTTTTTAAGGAGAAAAGCAGCTACCATTCTTGACGAGGGAGACCTCAGTGGTCAAAACCTCGGGCTGGAAATGTTGGTAGCAAATCCCTTGGAGATCACTCCCGATGTGGAAAGGCGTGTCAGTGAAGGATTCAAGGCTTGGATGGGATCTTCTCTCTTATCCTCTGATGAAGAAGATGAATCTGATAGCTACGAAGGCGTAACATCCCATATGAACCATACTAACTCTAACAGGCACATAGCT

mRNA sequence

ATGGCAATTATTGGAGACGCACTTCGCCAGGCGTTCATGCCAAAGCACGAGTATGAGAACCTCCGCGAAGAAGAAAAAACTTGGGGCAAGCTTCAGAAACCGTTGGTTATGGCTCTCGTGGCTTTGATAGGGCTCGCAATTATTGTATGCACTACTATTAGTCTGAACATAGTCTTCCCCAACGACATCGCAAATAGACCATTCTGCAACGACAGGAGGCTTCAGCCTCTCCCCGTAAATGGAAAAGGAGGCGAATCTGATTTTGTTCTTGGAGCTTTTTATCTCACGAATCAAGAAATCGTGGACTATTATTGGATGCTCGTGTTCATCCCCTCAGTAGTCGCATTTGCTGCATCGGTTGTCTATCTTGTTGCGGGCATAATTGTTGCTTATTCTGCTCCAACTAGACACGGTTGCTTGAAAGTAGTTGAGAATAGCTACTGTGCATCCAGAAGAGGTGGAGTTCGCTGTCTTACCATCTTGAATGTTGTTTTTGCCATCATCTTTGGCCTTTTGGCGCTATTTCTTGGTTCAAGTCTTCTCACCTTGGGTGGGAGCTGCGCAGTGCCCCTGTTTTGGTGTTATGAGATCACATCATGGGGTCTAGTTATTCTCTATGGAGGAACTGCATTCTTTTTAAGGAGAAAAGCAGCTACCATTCTTGACGAGGGAGACCTCAGTGGTCAAAACCTCGGGCTGGAAATGTTGGTAGCAAATCCCTTGGAGATCACTCCCGATGTGGAAAGGCGTGTCAGTGAAGGATTCAAGGCTTGGATGGGATCTTCTCTCTTATCCTCTGATGAAGAAGATGAATCTGATAGCTACGAAGGCGTAACATCCCATATGAACCATACTAACTCTAACAGGCACATAGCT

Coding sequence (CDS)

ATGGCAATTATTGGAGACGCACTTCGCCAGGCGTTCATGCCAAAGCACGAGTATGAGAACCTCCGCGAAGAAGAAAAAACTTGGGGCAAGCTTCAGAAACCGTTGGTTATGGCTCTCGTGGCTTTGATAGGGCTCGCAATTATTGTATGCACTACTATTAGTCTGAACATAGTCTTCCCCAACGACATCGCAAATAGACCATTCTGCAACGACAGGAGGCTTCAGCCTCTCCCCGTAAATGGAAAAGGAGGCGAATCTGATTTTGTTCTTGGAGCTTTTTATCTCACGAATCAAGAAATCGTGGACTATTATTGGATGCTCGTGTTCATCCCCTCAGTAGTCGCATTTGCTGCATCGGTTGTCTATCTTGTTGCGGGCATAATTGTTGCTTATTCTGCTCCAACTAGACACGGTTGCTTGAAAGTAGTTGAGAATAGCTACTGTGCATCCAGAAGAGGTGGAGTTCGCTGTCTTACCATCTTGAATGTTGTTTTTGCCATCATCTTTGGCCTTTTGGCGCTATTTCTTGGTTCAAGTCTTCTCACCTTGGGTGGGAGCTGCGCAGTGCCCCTGTTTTGGTGTTATGAGATCACATCATGGGGTCTAGTTATTCTCTATGGAGGAACTGCATTCTTTTTAAGGAGAAAAGCAGCTACCATTCTTGACGAGGGAGACCTCAGTGGTCAAAACCTCGGGCTGGAAATGTTGGTAGCAAATCCCTTGGAGATCACTCCCGATGTGGAAAGGCGTGTCAGTGAAGGATTCAAGGCTTGGATGGGATCTTCTCTCTTATCCTCTGATGAAGAAGATGAATCTGATAGCTACGAAGGCGTAACATCCCATATGAACCATACTAACTCTAACAGGCACATAGCT

Protein sequence

MAIIGDALRQAFMPKHEYENLREEEKTWGKLQKPLVMALVALIGLAIIVCTTISLNIVFPNDIANRPFCNDRRLQPLPVNGKGGESDFVLGAFYLTNQEIVDYYWMLVFIPSVVAFAASVVYLVAGIIVAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSSLLTLGGSCAVPLFWCYEITSWGLVILYGGTAFFLRRKAATILDEGDLSGQNLGLEMLVANPLEITPDVERRVSEGFKAWMGSSLLSSDEEDESDSYEGVTSHMNHTNSNRHIA

Homology

[Close]

BLAST of MS001225.1 vs. NCBI nr
Match: XP_022132184.1 (uncharacterized protein LOC111005105 [Momordica charantia])

HSP 1 Score: 571.2 bits (1471), Expect = 5.0e-159
Identity = 290/292 (99.32%), Postives = 290/292 (99.32%), Query Frame = 0


Query: 1   MAIIGDALRQAFMPKHEYENLREEEKTWGKLQKPLVMALVALIGLAIIVCTTISLNIVFP 60
           MAIIGDALRQAFMPKHEYENLREEEK WGKLQKPLVMALVALIGLAIIVCTTISLNIVFP
Sbjct: 1   MAIIGDALRQAFMPKHEYENLREEEKAWGKLQKPLVMALVALIGLAIIVCTTISLNIVFP 60

Query: 61  NDIANRPFCNDRRLQPLPVNGKGGESDFVLGAFYLTNQEIVDYYWMLVFIPSVVAFAASV 120
           NDIANRPFCNDRRLQPLPVNGKGGESDFVLGAFYLTNQEIVDYYWMLVFIPSVVAFAASV
Sbjct: 61  NDIANRPFCNDRRLQPLPVNGKGGESDFVLGAFYLTNQEIVDYYWMLVFIPSVVAFAASV 120

Query: 121 VYLVAGIIVAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSSL 180
           VYLVAGIIVAYS PTRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSSL
Sbjct: 121 VYLVAGIIVAYSGPTRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSSL 180

Query: 181 LTLGGSCAVPLFWCYEITSWGLVILYGGTAFFLRRKAATILDEGDLSGQNLGLEMLVANP 240
           LTLGGSCAVPLFWCYEITSWGLVILYGGTAFFLRRKAATILDEGDLSGQNLGLEMLVANP
Sbjct: 181 LTLGGSCAVPLFWCYEITSWGLVILYGGTAFFLRRKAATILDEGDLSGQNLGLEMLVANP 240

Query: 241 LEITPDVERRVSEGFKAWMGSSLLSSDEEDESDSYEGVTSHMNHTNSNRHIA 293
           LEITPDVERRVSEGFKAWMGSSLLSSDEEDESDSYEGVTSHMNHTNSNRHIA
Sbjct: 241 LEITPDVERRVSEGFKAWMGSSLLSSDEEDESDSYEGVTSHMNHTNSNRHIA 292

[Close]

BLAST of MS001225.1 vs. NCBI nr
Match: XP_038886522.1 (uncharacterized protein LOC120076695 [Benincasa hispida])

HSP 1 Score: 523.5 bits (1347), Expect = 1.2e-144
Identity = 262/291 (90.03%), Postives = 276/291 (94.85%), Query Frame = 0


Query: 1   MAIIGDALRQAFMPKHEYENLREEEKTWGKLQKPLVMALVALIGLAIIVCTTISLNIVFP 60
           MAIIGDALRQAFMPKHEYENLREEEK WGKLQKPL+MALVALIG+ IIVCT ISLNIVFP
Sbjct: 1   MAIIGDALRQAFMPKHEYENLREEEKAWGKLQKPLIMALVALIGIVIIVCTAISLNIVFP 60

Query: 61  NDIANRPFCNDRRLQPLPVNGKGGESDFVLGAFYLTNQEIVDYYWMLVFIPSVVAFAASV 120
           +DI NRPFC+DRRLQPLP+NGK GESD +LGAFYLTNQEIVDYYWMLVFIPSVVAF AS 
Sbjct: 61  DDIGNRPFCSDRRLQPLPMNGKVGESDHLLGAFYLTNQEIVDYYWMLVFIPSVVAFLASA 120

Query: 121 VYLVAGIIVAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSSL 180
           VYLVAGI+VAYSAPTRH CLKVVENSYCASRRGGVRCLTILNV+FAIIFGLLALFLGSSL
Sbjct: 121 VYLVAGIVVAYSAPTRHSCLKVVENSYCASRRGGVRCLTILNVIFAIIFGLLALFLGSSL 180

Query: 181 LTLGGSCAVPLFWCYEITSWGLVILYGGTAFFLRRKAATILDEGDLSGQNLGLEMLVANP 240
           LTLGGSC+VPLFWCYEI+SWGLVILYGGTAFFLRRKAATIL EG+L G+NLGLEMLVANP
Sbjct: 181 LTLGGSCSVPLFWCYEISSWGLVILYGGTAFFLRRKAATILGEGELGGRNLGLEMLVANP 240

Query: 241 LEITPDVERRVSEGFKAWMGSSLLSSDEEDESDSYEGVTSHMNHTNSNRHI 292
           +EITPDVERRV+EGFKAWMGSSLLSSDEEDE DSYE VTSHMNH NSNR I
Sbjct: 241 MEITPDVERRVNEGFKAWMGSSLLSSDEEDEPDSYEEVTSHMNHANSNRPI 291

[Close]

BLAST of MS001225.1 vs. NCBI nr
Match: XP_008445033.1 (PREDICTED: uncharacterized protein LOC103488196 [Cucumis melo] >KAA0065028.1 uncharacterized protein E6C27_scaffold82G003540 [Cucumis melo var. makuwa])

HSP 1 Score: 521.2 bits (1341), Expect = 5.9e-144
Identity = 265/293 (90.44%), Postives = 279/293 (95.22%), Query Frame = 0


Query: 1   MAIIGDALRQAFMPKHEYENLREEEKTWGKLQKPLVMALVALIGLAIIVCTTISLNIVFP 60
           MAIIGDALRQAFMPKHEYENLREEEK WGKLQKP+VMALVALIGLAIIVCTTISLNIVFP
Sbjct: 1   MAIIGDALRQAFMPKHEYENLREEEKAWGKLQKPMVMALVALIGLAIIVCTTISLNIVFP 60

Query: 61  NDIANRPFCNDRRLQPLP-VNGKGGESDFVLGAFYLTNQEIVDYYWMLVFIPSVVAFAAS 120
           +DI NRPFC+DRRLQPLP +NGKGGESD  LGAFYLTNQEIVDYYWMLVFIPSVVAF AS
Sbjct: 61  DDIGNRPFCSDRRLQPLPMMNGKGGESDHFLGAFYLTNQEIVDYYWMLVFIPSVVAFLAS 120

Query: 121 VVYLVAGIIVAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSS 180
            VYLVAGI+VAYSAP+RHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSS
Sbjct: 121 AVYLVAGIVVAYSAPSRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSS 180

Query: 181 LLTLGGSCAVPLFWCYEITSWGLVILYGGTAFFLRRKAATILDEGDLSGQNLGLEMLVAN 240
           LLTLGGSC+VPLFWCYEI+SWGLVILYGGTAFFLRRK+ATIL EGDL G+NLGLEMLVAN
Sbjct: 181 LLTLGGSCSVPLFWCYEISSWGLVILYGGTAFFLRRKSATILGEGDLGGRNLGLEMLVAN 240

Query: 241 PLEITPDVERRVSEGFKAWMGSSLLSSDEEDESDSYEGVTSHMNHTN-SNRHI 292
           P+EITPD+ERRV+EGFKAWMGSSLLSSDEEDE DSYE VTSHMNH N +N HI
Sbjct: 241 PMEITPDMERRVNEGFKAWMGSSLLSSDEEDEPDSYEEVTSHMNHANFNNGHI 293

[Close]

BLAST of MS001225.1 vs. NCBI nr
Match: XP_023547204.1 (uncharacterized protein LOC111806085 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 518.8 bits (1335), Expect = 2.9e-143
Identity = 258/291 (88.66%), Postives = 272/291 (93.47%), Query Frame = 0


Query: 1   MAIIGDALRQAFMPKHEYENLREEEKTWGKLQKPLVMALVALIGLAIIVCTTISLNIVFP 60
           MAIIGDALRQAFMPKHEYENLREEEK WGK+QKPLVMA V LIG AIIVCTTISL IVFP
Sbjct: 1   MAIIGDALRQAFMPKHEYENLREEEKAWGKIQKPLVMAFVVLIGFAIIVCTTISLKIVFP 60

Query: 61  NDIANRPFCNDRRLQPLPVNGKGGESDFVLGAFYLTNQEIVDYYWMLVFIPSVVAFAASV 120
            DI NRPFC+DRRLQPLP+NGKGG+SD  +GAFYLTNQEIVDY+WMLVFIPS  AF ASV
Sbjct: 61  GDIGNRPFCSDRRLQPLPMNGKGGDSDHFVGAFYLTNQEIVDYFWMLVFIPSAFAFLASV 120

Query: 121 VYLVAGIIVAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSSL 180
           VYL+AGI VAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNV+FAIIFGLLALFLGSSL
Sbjct: 121 VYLIAGIAVAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNVIFAIIFGLLALFLGSSL 180

Query: 181 LTLGGSCAVPLFWCYEITSWGLVILYGGTAFFLRRKAATILDEGDLSGQNLGLEMLVANP 240
           LTLGGSC+VPLFWCYEI+SWGLVILYGGTAFFLRRKAATIL EGDL G+NLGLEMLVANP
Sbjct: 181 LTLGGSCSVPLFWCYEISSWGLVILYGGTAFFLRRKAATILGEGDLGGRNLGLEMLVANP 240

Query: 241 LEITPDVERRVSEGFKAWMGSSLLSSDEEDESDSYEGVTSHMNHTNSNRHI 292
           LEI+PDVERRV+EGFKAWMGSSLLSSDEEDE DSY+ V SHMNH NSNRHI
Sbjct: 241 LEISPDVERRVNEGFKAWMGSSLLSSDEEDEPDSYDEVASHMNHANSNRHI 291

[Close]

BLAST of MS001225.1 vs. NCBI nr
Match: KAG7029724.1 (hypothetical protein SDJN02_08066 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 517.3 bits (1331), Expect = 8.5e-143
Identity = 258/291 (88.66%), Postives = 272/291 (93.47%), Query Frame = 0


Query: 1   MAIIGDALRQAFMPKHEYENLREEEKTWGKLQKPLVMALVALIGLAIIVCTTISLNIVFP 60
           MAIIGDALRQAFMPKHEYENLREEEK WGK+QKPLVMA   LIGLAIIVCTTISL IVFP
Sbjct: 1   MAIIGDALRQAFMPKHEYENLREEEKAWGKIQKPLVMAFGVLIGLAIIVCTTISLKIVFP 60

Query: 61  NDIANRPFCNDRRLQPLPVNGKGGESDFVLGAFYLTNQEIVDYYWMLVFIPSVVAFAASV 120
            DI NRPFC+DRRLQPLP+NGKGG+SD  +GAFYLTNQEIVDY+WMLVFIPS  AF ASV
Sbjct: 61  GDIGNRPFCSDRRLQPLPMNGKGGDSDHFVGAFYLTNQEIVDYFWMLVFIPSAFAFLASV 120

Query: 121 VYLVAGIIVAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSSL 180
           VYL+AGI VAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNV+FAIIFGLLALFLGSSL
Sbjct: 121 VYLIAGIAVAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNVIFAIIFGLLALFLGSSL 180

Query: 181 LTLGGSCAVPLFWCYEITSWGLVILYGGTAFFLRRKAATILDEGDLSGQNLGLEMLVANP 240
           LTLGGSC+VPLFWCYEI+SWGLVILYGGTAFFLRRKAATIL EGDL G+NLGLEMLVANP
Sbjct: 181 LTLGGSCSVPLFWCYEISSWGLVILYGGTAFFLRRKAATILGEGDLGGRNLGLEMLVANP 240

Query: 241 LEITPDVERRVSEGFKAWMGSSLLSSDEEDESDSYEGVTSHMNHTNSNRHI 292
           LEI+PDVERRV+EGFKAWMGSSLLSSDEEDE DSY+ VTSH NH NSNRHI
Sbjct: 241 LEISPDVERRVNEGFKAWMGSSLLSSDEEDEPDSYDEVTSHTNHANSNRHI 291

[Close]

BLAST of MS001225.1 vs. ExPASy TrEMBL
Match: A0A6J1BSC6 (uncharacterized protein LOC111005105 OS=Momordica charantia OX=3673 GN=LOC111005105 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 2.4e-159
Identity = 290/292 (99.32%), Postives = 290/292 (99.32%), Query Frame = 0


Query: 1   MAIIGDALRQAFMPKHEYENLREEEKTWGKLQKPLVMALVALIGLAIIVCTTISLNIVFP 60
           MAIIGDALRQAFMPKHEYENLREEEK WGKLQKPLVMALVALIGLAIIVCTTISLNIVFP
Sbjct: 1   MAIIGDALRQAFMPKHEYENLREEEKAWGKLQKPLVMALVALIGLAIIVCTTISLNIVFP 60

Query: 61  NDIANRPFCNDRRLQPLPVNGKGGESDFVLGAFYLTNQEIVDYYWMLVFIPSVVAFAASV 120
           NDIANRPFCNDRRLQPLPVNGKGGESDFVLGAFYLTNQEIVDYYWMLVFIPSVVAFAASV
Sbjct: 61  NDIANRPFCNDRRLQPLPVNGKGGESDFVLGAFYLTNQEIVDYYWMLVFIPSVVAFAASV 120

Query: 121 VYLVAGIIVAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSSL 180
           VYLVAGIIVAYS PTRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSSL
Sbjct: 121 VYLVAGIIVAYSGPTRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSSL 180

Query: 181 LTLGGSCAVPLFWCYEITSWGLVILYGGTAFFLRRKAATILDEGDLSGQNLGLEMLVANP 240
           LTLGGSCAVPLFWCYEITSWGLVILYGGTAFFLRRKAATILDEGDLSGQNLGLEMLVANP
Sbjct: 181 LTLGGSCAVPLFWCYEITSWGLVILYGGTAFFLRRKAATILDEGDLSGQNLGLEMLVANP 240

Query: 241 LEITPDVERRVSEGFKAWMGSSLLSSDEEDESDSYEGVTSHMNHTNSNRHIA 293
           LEITPDVERRVSEGFKAWMGSSLLSSDEEDESDSYEGVTSHMNHTNSNRHIA
Sbjct: 241 LEITPDVERRVSEGFKAWMGSSLLSSDEEDESDSYEGVTSHMNHTNSNRHIA 292

[Close]

BLAST of MS001225.1 vs. ExPASy TrEMBL
Match: A0A5A7VBN1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003540 PE=4 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 2.9e-144
Identity = 265/293 (90.44%), Postives = 279/293 (95.22%), Query Frame = 0


Query: 1   MAIIGDALRQAFMPKHEYENLREEEKTWGKLQKPLVMALVALIGLAIIVCTTISLNIVFP 60
           MAIIGDALRQAFMPKHEYENLREEEK WGKLQKP+VMALVALIGLAIIVCTTISLNIVFP
Sbjct: 1   MAIIGDALRQAFMPKHEYENLREEEKAWGKLQKPMVMALVALIGLAIIVCTTISLNIVFP 60

Query: 61  NDIANRPFCNDRRLQPLP-VNGKGGESDFVLGAFYLTNQEIVDYYWMLVFIPSVVAFAAS 120
           +DI NRPFC+DRRLQPLP +NGKGGESD  LGAFYLTNQEIVDYYWMLVFIPSVVAF AS
Sbjct: 61  DDIGNRPFCSDRRLQPLPMMNGKGGESDHFLGAFYLTNQEIVDYYWMLVFIPSVVAFLAS 120

Query: 121 VVYLVAGIIVAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSS 180
            VYLVAGI+VAYSAP+RHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSS
Sbjct: 121 AVYLVAGIVVAYSAPSRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSS 180

Query: 181 LLTLGGSCAVPLFWCYEITSWGLVILYGGTAFFLRRKAATILDEGDLSGQNLGLEMLVAN 240
           LLTLGGSC+VPLFWCYEI+SWGLVILYGGTAFFLRRK+ATIL EGDL G+NLGLEMLVAN
Sbjct: 181 LLTLGGSCSVPLFWCYEISSWGLVILYGGTAFFLRRKSATILGEGDLGGRNLGLEMLVAN 240

Query: 241 PLEITPDVERRVSEGFKAWMGSSLLSSDEEDESDSYEGVTSHMNHTN-SNRHI 292
           P+EITPD+ERRV+EGFKAWMGSSLLSSDEEDE DSYE VTSHMNH N +N HI
Sbjct: 241 PMEITPDMERRVNEGFKAWMGSSLLSSDEEDEPDSYEEVTSHMNHANFNNGHI 293

[Close]

BLAST of MS001225.1 vs. ExPASy TrEMBL
Match: A0A1S3BBR1 (uncharacterized protein LOC103488196 OS=Cucumis melo OX=3656 GN=LOC103488196 PE=4 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 2.9e-144
Identity = 265/293 (90.44%), Postives = 279/293 (95.22%), Query Frame = 0


Query: 1   MAIIGDALRQAFMPKHEYENLREEEKTWGKLQKPLVMALVALIGLAIIVCTTISLNIVFP 60
           MAIIGDALRQAFMPKHEYENLREEEK WGKLQKP+VMALVALIGLAIIVCTTISLNIVFP
Sbjct: 1   MAIIGDALRQAFMPKHEYENLREEEKAWGKLQKPMVMALVALIGLAIIVCTTISLNIVFP 60

Query: 61  NDIANRPFCNDRRLQPLP-VNGKGGESDFVLGAFYLTNQEIVDYYWMLVFIPSVVAFAAS 120
           +DI NRPFC+DRRLQPLP +NGKGGESD  LGAFYLTNQEIVDYYWMLVFIPSVVAF AS
Sbjct: 61  DDIGNRPFCSDRRLQPLPMMNGKGGESDHFLGAFYLTNQEIVDYYWMLVFIPSVVAFLAS 120

Query: 121 VVYLVAGIIVAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSS 180
            VYLVAGI+VAYSAP+RHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSS
Sbjct: 121 AVYLVAGIVVAYSAPSRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSS 180

Query: 181 LLTLGGSCAVPLFWCYEITSWGLVILYGGTAFFLRRKAATILDEGDLSGQNLGLEMLVAN 240
           LLTLGGSC+VPLFWCYEI+SWGLVILYGGTAFFLRRK+ATIL EGDL G+NLGLEMLVAN
Sbjct: 181 LLTLGGSCSVPLFWCYEISSWGLVILYGGTAFFLRRKSATILGEGDLGGRNLGLEMLVAN 240

Query: 241 PLEITPDVERRVSEGFKAWMGSSLLSSDEEDESDSYEGVTSHMNHTN-SNRHI 292
           P+EITPD+ERRV+EGFKAWMGSSLLSSDEEDE DSYE VTSHMNH N +N HI
Sbjct: 241 PMEITPDMERRVNEGFKAWMGSSLLSSDEEDEPDSYEEVTSHMNHANFNNGHI 293

[Close]

BLAST of MS001225.1 vs. ExPASy TrEMBL
Match: A0A0A0LS39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375210 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 5.4e-143
Identity = 263/293 (89.76%), Postives = 278/293 (94.88%), Query Frame = 0


Query: 1   MAIIGDALRQAFMPKHEYENLREEEKTWGKLQKPLVMALVALIGLAIIVCTTISLNIVFP 60
           MAIIGDALRQAFMPKHEYENLREEEK WGKLQKPLVMALVALIGLAIIVCT+ISLNIVFP
Sbjct: 1   MAIIGDALRQAFMPKHEYENLREEEKAWGKLQKPLVMALVALIGLAIIVCTSISLNIVFP 60

Query: 61  NDIANRPFCNDRRLQPLP-VNGKGGESDFVLGAFYLTNQEIVDYYWMLVFIPSVVAFAAS 120
           +DI NRPFC+DRRLQPLP +NGKGGESD  LGAFYLTNQEIVDYYWMLVFIPSVVAF AS
Sbjct: 61  DDIGNRPFCSDRRLQPLPMMNGKGGESDHFLGAFYLTNQEIVDYYWMLVFIPSVVAFFAS 120

Query: 121 VVYLVAGIIVAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSS 180
            +YLVAGI+VAYSAP+RHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSS
Sbjct: 121 AIYLVAGIVVAYSAPSRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSS 180

Query: 181 LLTLGGSCAVPLFWCYEITSWGLVILYGGTAFFLRRKAATILDEGDLSGQNLGLEMLVAN 240
           LLTLGGSC+VPLFWCYEI+SWGLVILYGGTAFFLRRK+ATIL EGDL  +NLGLEMLVAN
Sbjct: 181 LLTLGGSCSVPLFWCYEISSWGLVILYGGTAFFLRRKSATILGEGDLGSRNLGLEMLVAN 240

Query: 241 PLEITPDVERRVSEGFKAWMGSSLLSSDEEDESDSYEGVTSHMNHTN-SNRHI 292
           P+EITPDVERRV+EGFKAWMGSSLLSSDEEDE DSYE VTSH+NH N +N HI
Sbjct: 241 PMEITPDVERRVNEGFKAWMGSSLLSSDEEDEPDSYEEVTSHINHANFNNGHI 293

[Close]

BLAST of MS001225.1 vs. ExPASy TrEMBL
Match: A0A6J1HEP5 (uncharacterized protein LOC111462802 OS=Cucurbita moschata OX=3662 GN=LOC111462802 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 7.1e-143
Identity = 257/291 (88.32%), Postives = 272/291 (93.47%), Query Frame = 0


Query: 1   MAIIGDALRQAFMPKHEYENLREEEKTWGKLQKPLVMALVALIGLAIIVCTTISLNIVFP 60
           MAIIGDALRQAFMPKHEYENLREEEK WGK+QKPLVMA V LIGLAIIVC+TISL IVFP
Sbjct: 1   MAIIGDALRQAFMPKHEYENLREEEKAWGKIQKPLVMAFVVLIGLAIIVCSTISLKIVFP 60

Query: 61  NDIANRPFCNDRRLQPLPVNGKGGESDFVLGAFYLTNQEIVDYYWMLVFIPSVVAFAASV 120
            DI NRPFC+DRRLQPLP+NGKGG+SD  +GAFYLTNQEIVDY+WMLVFIPS  AF ASV
Sbjct: 61  GDIGNRPFCSDRRLQPLPMNGKGGDSDHFVGAFYLTNQEIVDYFWMLVFIPSAFAFLASV 120

Query: 121 VYLVAGIIVAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSSL 180
           VYL+AGI VAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNV+FAIIFGLLALFLGSSL
Sbjct: 121 VYLIAGIAVAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNVIFAIIFGLLALFLGSSL 180

Query: 181 LTLGGSCAVPLFWCYEITSWGLVILYGGTAFFLRRKAATILDEGDLSGQNLGLEMLVANP 240
           LTLGGSC+VPLFWCYEI+SWGLVILYGGTAFFLRRKAATIL EGDL G+NLGLEMLVANP
Sbjct: 181 LTLGGSCSVPLFWCYEISSWGLVILYGGTAFFLRRKAATILGEGDLGGRNLGLEMLVANP 240

Query: 241 LEITPDVERRVSEGFKAWMGSSLLSSDEEDESDSYEGVTSHMNHTNSNRHI 292
           LEI+PDVERRV+EGFKAWMGSSLLSSDEEDE DSY+ V SH NH NSNRHI
Sbjct: 241 LEISPDVERRVNEGFKAWMGSSLLSSDEEDEPDSYDEVASHTNHANSNRHI 291

[Close]

BLAST of MS001225.1 vs. TAIR 10
Match: AT4G32750.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 399.1 bits (1024), Expect = 3.2e-111
Identity = 199/290 (68.62%), Postives = 237/290 (81.72%), Query Frame = 0


Query: 1   MAIIGDALRQAFMPKHEYENLREEEKTWGKLQKPLVMALVALIGLAIIVCTTISLNIVFP 60
           MAIIGDALRQAFMPK EYE+LREE++ W KLQ+P ++++VA +   I  CT +SL IVFP
Sbjct: 1   MAIIGDALRQAFMPKQEYESLREEDRAWIKLQRPTLVSIVAFLCFVIFTCTIVSLKIVFP 60

Query: 61  NDIANRPFCNDRRLQPLPVNGKGGESDFVLGAFYLTNQEIVDYYWMLVFIPSVVAFAASV 120
           +++  RPFC+D +LQPLP+ GK  +SD   GAFYLT+QE VDYYWM+VF+PS + F  S 
Sbjct: 61  SNVLKRPFCSDIKLQPLPIYGKARDSDLFPGAFYLTDQETVDYYWMVVFVPSTIIFLVSS 120

Query: 121 VYLVAGIIVAYSAPTRHGCLKVVENSYCASRRGGVRCLTILNVVFAIIFGLLALFLGSSL 180
           VYLVAGI VAYSAP RHG LKVVEN+YCASRRGGVRCL+ILNVVFAII+GLLA+FLGSSL
Sbjct: 121 VYLVAGIFVAYSAPHRHGFLKVVENNYCASRRGGVRCLSILNVVFAIIYGLLAIFLGSSL 180

Query: 181 LTLGGSCAVPLFWCYEITSWGLVILYGGTAFFLRRKAATILDEGDLSGQN-LGLEMLVAN 240
           LTLG SC+VPLFWCYEI+SWGLVILY GTAF LRR+AA  +DEG+   +N  GLEML AN
Sbjct: 181 LTLGSSCSVPLFWCYEISSWGLVILYAGTAFSLRRRAALTIDEGEFGNRNDQGLEMLEAN 240

Query: 241 PLEITPDVERRVSEGFKAWMGSSLLSSDEEDESDSYEGVTSHMNHTNSNR 290
           PLE TPDVERRV+EGFKAWMG SLLSSDEE++   +     ++ HT S+R
Sbjct: 241 PLEFTPDVERRVNEGFKAWMGPSLLSSDEEEDEPDFYNEVPNVTHTLSSR 290

The following BLAST results are available for this feature:

BLAST of MS001225.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132184.1	5.0e-159	99.32	uncharacterized protein LOC111005105 [Momordica charantia]	[more]
XP_038886522.1	1.2e-144	90.03	uncharacterized protein LOC120076695 [Benincasa hispida]	[more]
XP_008445033.1	5.9e-144	90.44	PREDICTED: uncharacterized protein LOC103488196 [Cucumis melo] >KAA0065028.1 unc...	[more]
XP_023547204.1	2.9e-143	88.66	uncharacterized protein LOC111806085 [Cucurbita pepo subsp. pepo]	[more]
KAG7029724.1	8.5e-143	88.66	hypothetical protein SDJN02_08066 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of MS001225.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS001225.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BSC6	2.4e-159	99.32	uncharacterized protein LOC111005105 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A5A7VBN1	2.9e-144	90.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BBR1	2.9e-144	90.44	uncharacterized protein LOC103488196 OS=Cucumis melo OX=3656 GN=LOC103488196 PE=...	[more]
A0A0A0LS39	5.4e-143	89.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375210 PE=4 SV=1	[more]
A0A6J1HEP5	7.1e-143	88.32	uncharacterized protein LOC111462802 OS=Cucurbita moschata OX=3662 GN=LOC1114628...	[more]

BLAST of MS001225.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32750.1	3.2e-111	68.62	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..292
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..292
None	No IPR available	PANTHER	PTHR36060	OS02G0272400 PROTEIN	coord: 1..289
None	No IPR available	PANTHER	PTHR36060:SF1	OS02G0272400 PROTEIN	coord: 1..289

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS001225	MS001225	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS001225.1-cds	MS001225.1-cds-scaffold36:2434385..2434760	CDS
MS001225.1-cds	MS001225.1-cds-scaffold36:2435968..2436048	CDS
MS001225.1-cds	MS001225.1-cds-scaffold36:2436700..2437118	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS001225.1	MS001225.1-protein	polypeptide