MS001202.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS001202.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	lachrymatory-factor synthase
Location	scaffold36: 2248762 .. 2249256 (-)
Sequence length	495
RNA-Seq Expression	MS001202.1
Synteny	MS001202.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAAACTCTCCGGCGAAGTGGGAAGGCCGAGTTTCCGAGGCGCTAACAGTGGCCAGCGCCGACCAGATATGGCCGATGCTCAAGGATTTCTTCAATTTCCACAAATGGTTTCCAACCCTAGCCACCTGCTACGGAATCGCCGGCACCAATGGCGAGGTCGGCTGCGTCCGATTCTGCTCCGGCTTCTCAATTCCGTCACTCGACGGCGCCGATCGCGTCGTTAGCTGGTCCAAGGAACGGCTGCTAGCCGTCGATGACGACAGCCGCCGTATACGCTACGAGATCGTGGATAGCAACATCGGATTCAAGTCGTACGTGGCCACGATCGAGATTGCGCCGGGAGGAGGCGGCGGCGGCGACGGCGTGATCGAATGGAGGTTCGCGGTGGAGCCGGTGGAAGGTTTGAAGCTGGAGGATCTGGTGAAGAAGTACCAAGAGGGATTGCGGTCCATGGTTAAGCGAATGGAGGCTGCCCTAGAACTAGAAGAA

mRNA sequence

ATGGCGGAAAACTCTCCGGCGAAGTGGGAAGGCCGAGTTTCCGAGGCGCTAACAGTGGCCAGCGCCGACCAGATATGGCCGATGCTCAAGGATTTCTTCAATTTCCACAAATGGTTTCCAACCCTAGCCACCTGCTACGGAATCGCCGGCACCAATGGCGAGGTCGGCTGCGTCCGATTCTGCTCCGGCTTCTCAATTCCGTCACTCGACGGCGCCGATCGCGTCGTTAGCTGGTCCAAGGAACGGCTGCTAGCCGTCGATGACGACAGCCGCCGTATACGCTACGAGATCGTGGATAGCAACATCGGATTCAAGTCGTACGTGGCCACGATCGAGATTGCGCCGGGAGGAGGCGGCGGCGGCGACGGCGTGATCGAATGGAGGTTCGCGGTGGAGCCGGTGGAAGGTTTGAAGCTGGAGGATCTGGTGAAGAAGTACCAAGAGGGATTGCGGTCCATGGTTAAGCGAATGGAGGCTGCCCTAGAACTAGAAGAA

Coding sequence (CDS)

ATGGCGGAAAACTCTCCGGCGAAGTGGGAAGGCCGAGTTTCCGAGGCGCTAACAGTGGCCAGCGCCGACCAGATATGGCCGATGCTCAAGGATTTCTTCAATTTCCACAAATGGTTTCCAACCCTAGCCACCTGCTACGGAATCGCCGGCACCAATGGCGAGGTCGGCTGCGTCCGATTCTGCTCCGGCTTCTCAATTCCGTCACTCGACGGCGCCGATCGCGTCGTTAGCTGGTCCAAGGAACGGCTGCTAGCCGTCGATGACGACAGCCGCCGTATACGCTACGAGATCGTGGATAGCAACATCGGATTCAAGTCGTACGTGGCCACGATCGAGATTGCGCCGGGAGGAGGCGGCGGCGGCGACGGCGTGATCGAATGGAGGTTCGCGGTGGAGCCGGTGGAAGGTTTGAAGCTGGAGGATCTGGTGAAGAAGTACCAAGAGGGATTGCGGTCCATGGTTAAGCGAATGGAGGCTGCCCTAGAACTAGAAGAA

Protein sequence

MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRFCSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGGGDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALELEE

Homology

[Close]

BLAST of MS001202.1 vs. NCBI nr
Match: XP_022131917.1 (lachrymatory-factor synthase [Momordica charantia])

HSP 1 Score: 325.1 bits (832), Expect = 3.5e-85
Identity = 161/165 (97.58%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60
           MAE SPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF
Sbjct: 1   MAETSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60

Query: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGG 120
           CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAP   GG
Sbjct: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAP---GG 120

Query: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALELEE 166
           GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALELEE
Sbjct: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALELEE 162

[Close]

BLAST of MS001202.1 vs. NCBI nr
Match: XP_023537781.1 (lachrymatory-factor synthase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 269.6 bits (688), Expect = 1.8e-68
Identity = 128/162 (79.01%), Postives = 143/162 (88.27%), Query Frame = 0


Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60
           MAEN+ AKWEGRVSEAL  A+ADQIWPMLKDFFNFHKWFPTLA CYG++GTNGEVGCVRF
Sbjct: 1   MAENTAAKWEGRVSEALQGATADQIWPMLKDFFNFHKWFPTLANCYGLSGTNGEVGCVRF 60

Query: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGG 120
           CSGFSIPS DG+D VVSWSKERL+AVDD+ RRIRYEIVDSNIGFKSYV+TIE+  GG G 
Sbjct: 61  CSGFSIPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDG- 120

Query: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALE 163
             GVIEW F VE VEGLKLEDLVKK++ GL+SM +RME A++
Sbjct: 121 --GVIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQ 159

[Close]

BLAST of MS001202.1 vs. NCBI nr
Match: KAG6585381.1 (Lachrymatory-factor synthase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020297.1 Lachrymatory-factor synthase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268.5 bits (685), Expect = 3.9e-68
Identity = 128/162 (79.01%), Postives = 142/162 (87.65%), Query Frame = 0


Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60
           MAENS AKWEGRVSEAL  A+ADQIWPMLKDFFN HKWFPTLA CYG++GTNGEVGCVRF
Sbjct: 1   MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRF 60

Query: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGG 120
           CSGFSIPS DG+D VVSWSKERL+AVDD+ RRIRYEIVDSNIGFKSYV+TIE+  GG G 
Sbjct: 61  CSGFSIPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDG- 120

Query: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALE 163
             GVIEW F VE VEGLKLEDLVKK++ GL+SM +RME A++
Sbjct: 121 --GVIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQ 159

[Close]

BLAST of MS001202.1 vs. NCBI nr
Match: XP_023002531.1 (lachrymatory-factor synthase-like [Cucurbita maxima])

HSP 1 Score: 267.7 bits (683), Expect = 6.7e-68
Identity = 127/162 (78.40%), Postives = 141/162 (87.04%), Query Frame = 0


Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60
           MAENS AKWEGRVSE L  A+ADQIWPMLKDFFNFHKWFPTLA CYG++GTNGEVGCVRF
Sbjct: 1   MAENSAAKWEGRVSETLQGATADQIWPMLKDFFNFHKWFPTLANCYGLSGTNGEVGCVRF 60

Query: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGG 120
           CSGFSIPS DG+D VVSWSKERL+ VDD+ RRIRYEIVDSNIGFKSYV+TI++  GG G 
Sbjct: 61  CSGFSIPSTDGSDSVVSWSKERLVTVDDERRRIRYEIVDSNIGFKSYVSTIKVVEGGDG- 120

Query: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALE 163
             GVIEW F VE VEGLKLEDLVKK++ GL+SM KRME A++
Sbjct: 121 --GVIEWSFVVEAVEGLKLEDLVKKFERGLKSMAKRMEVAVQ 159

[Close]

BLAST of MS001202.1 vs. NCBI nr
Match: XP_022951556.1 (lachrymatory-factor synthase [Cucurbita moschata])

HSP 1 Score: 265.8 bits (678), Expect = 2.5e-67
Identity = 127/162 (78.40%), Postives = 141/162 (87.04%), Query Frame = 0


Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60
           MAENS AKWEGRVSEAL  A+ADQIWPMLKDFFN HKWFPTLA CYG++GTNGEVGCVRF
Sbjct: 1   MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRF 60

Query: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGG 120
           CSGFSIPS DG+  VVSWSKERL+AVDD+ RRIRYEIVDSNIGFKSYV+TIE+  GG G 
Sbjct: 61  CSGFSIPSTDGSGSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDG- 120

Query: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALE 163
             GVIEW F VE VEGLKLEDLVKK++ GL+SM +RME A++
Sbjct: 121 --GVIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQ 159

[Close]

BLAST of MS001202.1 vs. ExPASy Swiss-Prot
Match: P59082 (Lachrymatory-factor synthase OS=Allium cepa OX=4679 GN=LFS PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.1e-16
Identity = 44/134 (32.84%), Postives = 67/134 (50.00%), Query Frame = 0


Query: 4   NSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRFCSG 63
           N   KW G+V   L     +Q W +LKDF N HK  P+L+ C  + G    VGCVR+  G
Sbjct: 16  NGARKWSGKVHALLPNTKPEQAWTLLKDFINLHKVMPSLSVCELVEGEANVVGCVRYVKG 75

Query: 64  FSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGGGDG 123
              P  +       W+KE+L+A+D+ +    Y   +   G++ Y AT++I  G    G  
Sbjct: 76  IMHPIEE-----EFWAKEKLVALDNKNMSYSYIFTECFTGYEDYTATMQIVEGPEHKGSR 135

Query: 124 VIEWRFAVEPVEGL 138
             +W F  + +EG+
Sbjct: 136 -FDWSFQCKYIEGM 143

[Close]

BLAST of MS001202.1 vs. ExPASy TrEMBL
Match: A0A6J1BSC0 (lachrymatory-factor synthase OS=Momordica charantia OX=3673 GN=LOC111004938 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.7e-85
Identity = 161/165 (97.58%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60
           MAE SPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF
Sbjct: 1   MAETSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60

Query: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGG 120
           CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAP   GG
Sbjct: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAP---GG 120

Query: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALELEE 166
           GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALELEE
Sbjct: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALELEE 162

[Close]

BLAST of MS001202.1 vs. ExPASy TrEMBL
Match: A0A6J1KLK1 (lachrymatory-factor synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111496344 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.2e-68
Identity = 127/162 (78.40%), Postives = 141/162 (87.04%), Query Frame = 0


Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60
           MAENS AKWEGRVSE L  A+ADQIWPMLKDFFNFHKWFPTLA CYG++GTNGEVGCVRF
Sbjct: 1   MAENSAAKWEGRVSETLQGATADQIWPMLKDFFNFHKWFPTLANCYGLSGTNGEVGCVRF 60

Query: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGG 120
           CSGFSIPS DG+D VVSWSKERL+ VDD+ RRIRYEIVDSNIGFKSYV+TI++  GG G 
Sbjct: 61  CSGFSIPSTDGSDSVVSWSKERLVTVDDERRRIRYEIVDSNIGFKSYVSTIKVVEGGDG- 120

Query: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALE 163
             GVIEW F VE VEGLKLEDLVKK++ GL+SM KRME A++
Sbjct: 121 --GVIEWSFVVEAVEGLKLEDLVKKFERGLKSMAKRMEVAVQ 159

[Close]

BLAST of MS001202.1 vs. ExPASy TrEMBL
Match: A0A6J1GHW7 (lachrymatory-factor synthase OS=Cucurbita moschata OX=3662 GN=LOC111454336 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.2e-67
Identity = 127/162 (78.40%), Postives = 141/162 (87.04%), Query Frame = 0


Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60
           MAENS AKWEGRVSEAL  A+ADQIWPMLKDFFN HKWFPTLA CYG++GTNGEVGCVRF
Sbjct: 1   MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRF 60

Query: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGG 120
           CSGFSIPS DG+  VVSWSKERL+AVDD+ RRIRYEIVDSNIGFKSYV+TIE+  GG G 
Sbjct: 61  CSGFSIPSTDGSGSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDG- 120

Query: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALE 163
             GVIEW F VE VEGLKLEDLVKK++ GL+SM +RME A++
Sbjct: 121 --GVIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQ 159

[Close]

BLAST of MS001202.1 vs. ExPASy TrEMBL
Match: A0A5A7VFE2 (Lachrymatory-factor synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003740 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.5e-62
Identity = 122/163 (74.85%), Postives = 139/163 (85.28%), Query Frame = 0


Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGT-NGEVGCVR 60
           MAEN  +KWEGRV++ LT+A+ DQIWPM+KDFFNFHKWFPTLA CYG++GT N EVG VR
Sbjct: 17  MAENPASKWEGRVTQTLTLATPDQIWPMIKDFFNFHKWFPTLANCYGLSGTNNAEVGSVR 76

Query: 61  FCSGFSIP-SLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGG 120
           FCSGFSIP S DG+D VVSWSKERL+ VD++ RRI YE+VDSNIGFKSYVAT+E+  GGG
Sbjct: 77  FCSGFSIPSSSDGSDGVVSWSKERLVGVDEEHRRICYEMVDSNIGFKSYVATMEVGEGGG 136

Query: 121 GGGDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAAL 162
           GG   VIEWRF VE VEGLKLEDLVKKY+ GLRSM  RMEAA+
Sbjct: 137 GG--CVIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAV 177

[Close]

BLAST of MS001202.1 vs. ExPASy TrEMBL
Match: A0A0A0LPR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373500 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.5e-62
Identity = 119/155 (76.77%), Postives = 133/155 (85.81%), Query Frame = 0


Query: 7   AKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRFCSGFSI 66
           AKWEGRV+E LTVA+ DQIWPM+KDFFNFHKWFPTLA CYG++GTN EVG VRFCSGFSI
Sbjct: 19  AKWEGRVTETLTVATPDQIWPMIKDFFNFHKWFPTLANCYGLSGTNAEVGSVRFCSGFSI 78

Query: 67  PSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGGGDGVIE 126
           PS DG+D VVSWSKERL+ VD++ RRI YEIVDSNIGFKSYVAT+E+  G   GG  +IE
Sbjct: 79  PSSDGSDGVVSWSKERLVGVDEEHRRICYEIVDSNIGFKSYVATMEV--GSVSGGGCMIE 138

Query: 127 WRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAAL 162
           WRF VE VEGLKLEDLVKKY+ GLRSM  RMEAA+
Sbjct: 139 WRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAV 171

[Close]

BLAST of MS001202.1 vs. TAIR 10
Match: AT2G25770.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 4.8e-48
Identity = 90/155 (58.06%), Postives = 112/155 (72.26%), Query Frame = 0


Query: 4   NSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRFCSG 63
           +SP KW  +VS  LT A  D+IWP+  DFFN HKW PTLATC+G+ G NGE GC+RFCSG
Sbjct: 5   SSPEKWLAKVSVTLTKAKPDEIWPLFTDFFNLHKWLPTLATCHGVHGNNGEQGCIRFCSG 64

Query: 64  FSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGGGDG 123
           FSI S +G D    WSKE+L+AV+   R +RYEIV+SN GF+SYV+T++I P G  G   
Sbjct: 65  FSIGS-NGVDSAARWSKEKLVAVNPVERVMRYEIVESNTGFESYVSTVKILPRGEDG--C 124

Query: 124 VIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRME 159
           VIEW F V+PV GL LE+LVKKY++ L  + K ME
Sbjct: 125 VIEWSFTVDPVRGLSLENLVKKYEKALEIITKNME 156

[Close]

BLAST of MS001202.1 vs. TAIR 10
Match: AT2G25770.2 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 4.8e-48
Identity = 90/155 (58.06%), Postives = 112/155 (72.26%), Query Frame = 0


Query: 4   NSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRFCSG 63
           +SP KW  +VS  LT A  D+IWP+  DFFN HKW PTLATC+G+ G NGE GC+RFCSG
Sbjct: 5   SSPEKWLAKVSVTLTKAKPDEIWPLFTDFFNLHKWLPTLATCHGVHGNNGEQGCIRFCSG 64

Query: 64  FSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGGGDG 123
           FSI S +G D    WSKE+L+AV+   R +RYEIV+SN GF+SYV+T++I P G  G   
Sbjct: 65  FSIGS-NGVDSAARWSKEKLVAVNPVERVMRYEIVESNTGFESYVSTVKILPRGEDG--C 124

Query: 124 VIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRME 159
           VIEW F V+PV GL LE+LVKKY++ L  + K ME
Sbjct: 125 VIEWSFTVDPVRGLSLENLVKKYEKALEIITKNME 156

[Close]

BLAST of MS001202.1 vs. TAIR 10
Match: AT4G32870.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 2.5e-28
Identity = 57/154 (37.01%), Postives = 90/154 (58.44%), Query Frame = 0


Query: 8   KWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRFCSGFSIP 67
           KWEG+    +   +A+++W +  DF N  +WFP++ TCY + GT+G  G +R+CS     
Sbjct: 9   KWEGKKVAQVNGVTAEKVWSVFSDFCNVQEWFPSVDTCYRVQGTDGVPGLIRYCS----- 68

Query: 68  SLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGGGDGVIEW 127
           +    +    W+KE+L+ +D   R + YEI+++N+GF+SYVAT+++ P  G      IEW
Sbjct: 69  TTKTKEEGSRWAKEKLVKIDPIGRCLSYEILENNVGFRSYVATVQVTPVDGEDQVSRIEW 128

Query: 128 RFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAAL 162
            F  +PV+G K EDL       L+ M  +ME  L
Sbjct: 129 SFVADPVDGWKKEDLESYVDFCLQHMANKMELNL 157

[Close]

BLAST of MS001202.1 vs. TAIR 10
Match: AT1G70850.1 (MLP-like protein 34 )

HSP 1 Score: 43.1 bits (100), Expect = 2.5e-04
Identity = 23/67 (34.33%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 70  DGADRVVSWSKERLLAVDDDSRRIRYEIVDSNI--GFKSYVATIEIAPGGGGGGDGVIEW 129
           DG  +V   +KER+ AVD +   I + +++ ++   +KS+V TI++ P  GG G  V+ W
Sbjct: 225 DGEAKV---AKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHGGSG-SVVHW 284

Query: 130 RFAVEPV 135
            F  E +
Sbjct: 285 HFEYEKI 287

[Close]

BLAST of MS001202.1 vs. TAIR 10
Match: AT1G70850.3 (MLP-like protein 34 )

HSP 1 Score: 43.1 bits (100), Expect = 2.5e-04
Identity = 23/67 (34.33%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 70  DGADRVVSWSKERLLAVDDDSRRIRYEIVDSNI--GFKSYVATIEIAPGGGGGGDGVIEW 129
           DG  +V   +KER+ AVD +   I + +++ ++   +KS+V TI++ P  GG G  V+ W
Sbjct: 225 DGEAKV---AKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHGGSG-SVVHW 284

Query: 130 RFAVEPV 135
            F  E +
Sbjct: 285 HFEYEKI 287

The following BLAST results are available for this feature:

BLAST of MS001202.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131917.1	3.5e-85	97.58	lachrymatory-factor synthase [Momordica charantia]	[more]
XP_023537781.1	1.8e-68	79.01	lachrymatory-factor synthase [Cucurbita pepo subsp. pepo]	[more]
KAG6585381.1	3.9e-68	79.01	Lachrymatory-factor synthase, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_023002531.1	6.7e-68	78.40	lachrymatory-factor synthase-like [Cucurbita maxima]	[more]
XP_022951556.1	2.5e-67	78.40	lachrymatory-factor synthase [Cucurbita moschata]	[more]

BLAST of MS001202.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59082	2.1e-16	32.84	Lachrymatory-factor synthase OS=Allium cepa OX=4679 GN=LFS PE=1 SV=1	[more]

BLAST of MS001202.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BSC0	1.7e-85	97.58	lachrymatory-factor synthase OS=Momordica charantia OX=3673 GN=LOC111004938 PE=3...	[more]
A0A6J1KLK1	3.2e-68	78.40	lachrymatory-factor synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111496344 PE...	[more]
A0A6J1GHW7	1.2e-67	78.40	lachrymatory-factor synthase OS=Cucurbita moschata OX=3662 GN=LOC111454336 PE=3 ...	[more]
A0A5A7VFE2	4.5e-62	74.85	Lachrymatory-factor synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A0A0LPR8	4.5e-62	76.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373500 PE=3 SV=1	[more]

BLAST of MS001202.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25770.1	4.8e-48	58.06	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT2G25770.2	4.8e-48	58.06	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT4G32870.1	2.5e-28	37.01	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT1G70850.1	2.5e-04	34.33	MLP-like protein 34	[more]
AT1G70850.3	2.5e-04	34.33	MLP-like protein 34	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019587	Polyketide cyclase/dehydrase	PFAM	PF10604	Polyketide_cyc2	coord: 20..158 e-value: 1.0E-24 score: 87.5
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 2..165 e-value: 5.3E-51 score: 175.2
None	No IPR available	PANTHER	PTHR31213:SF18	POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER	coord: 6..162
None	No IPR available	PANTHER	PTHR31213	FAMILY NOT NAMED	coord: 6..162
None	No IPR available	CDD	cd07821	PYR_PYL_RCAR_like	coord: 12..158 e-value: 6.74042E-30 score: 104.328
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 18..161

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS001202	MS001202	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS001202.1-cds	MS001202.1-cds-scaffold36:2248762..2249256	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS001202.1	MS001202.1-protein	polypeptide