MS001164.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS001164.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold36: 1940183 .. 1944297 (+)
Sequence length	702
RNA-Seq Expression	MS001164.1
Synteny	MS001164.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTTGAGGTATCCGATCCAAACCCGGATATCGGCGATATTAGTAAGAGGAAGAATTTGGAGAGCCCGGCTGATGATCGAGTTCGTGTGAAGAAGAAGACCTTGCAGGCTGTGCTAGAGCAGTGCCAGAGAGCTCTCGAATTGCTTAATAACTCCAACGGTGTCGATGAAAACGAGGGAAATTATGCGAGTGGCGATGGGGATGAAGATGATCAGCTCGGTGAAGCCGACGAGGTATGGAGGTTTTTTATGATTCTAAAATTTAGTTTCAATCGACGGTTCTTGGTTGTAACTTTGCTTGATTGTATTGATCTGGTTTAGAAAAATCTAGCACAGTGATTGGGAAGATGCCGTGTGAGGGTTTTAACCGAGAATTCTTGGTTGAAAGTTGGATTGATTGTATTGTATCTGGGTTAGAAAAATTTAGCTCAATGATTGAGAAGATGCTATGCGTGTTTCTCTTGTTTGCTTTGCATTGCTGTGTTAAGCTGAATATCGGATAAGAGAAACAACTTCTGACTTTGATCTATTAGCTTATGGTAGTTCCTCATCTGTTGTTGATTTGAAGTCACTTTATATGGATGACTCGACAGCACAAGTGGTAGTTTTTCCTGGTTTGGCTTCAGGATGCTCTACTTTTATACAGTGGTGAGTATTTGTGTAAGATTGATTAGTGGGTATTTAGTCAGAGTTATGTATAACACTTGGTTTGAAGTTGCCAAGGTGCAATTCTTAATTACAATCCCTTTGTAATCATATTTTTTTCCTGGATCTATATGTGTTTTGTTCCATTGAAGTCGTTCATGAATCATTATGTTATGGCACCAGGGATGGCTACTCATGGAAGTGGTCAGGTTGACGAGACATTTGTTTTCATTTGGTTGAGAGTGTAGTTGGCAGCAACTCAACTAAATATTACTTATCTAGAGAAAATGCGAAATACAGCGACTTCTTTAGGCGTTTTCCTGGATATCGGGATCATATGCCAATTCAAGTAATATCATTCATTTGAAGAAAATATGAATTATGAGGACCTCGTTTGGTGTTTTTCATGGAAACTAGGATCCTCCATTTATTCACTCATGAAAATAGAACTGTCACTGAAATAGATGGAAAATTTACACTTCCCCTCCCCTTAATGCCATCTATACAGCACTCTATGGAAAGCCCTCCAATTGTCAATAATAATAAGGGGGTACACTAAAATTTAGAAGTAATAGACAAATGAAGCATTAAATGCAGTAGGTCTGCAAATCTCCTCCATGCAGAATAGTTAGTTACTCTGTGATTTCTCTGTATAGACTTTTATCTCTCTCTCTATGGAACTAGGTGTATGAAATTATTTTATATGGCCTTCATGCTGCTTAAATGTTATGTTGGAAATTGGAATCAATATGTGCTTTAAATATTATGATCCATGACATTGACTTGAAGACACCTGTCTGCAGTTGTGTGATCTTCTTAAATCTAAAGTTGAATGCCGTGACTTTCTAGAAAAGCTAGAGGATGCTCAAGCGTCAGTTCCGCAAAATACATCTGGTATGTGTTCAGATAAACAGATTGTAGTTTATGATTTTGAAGTTTGGTGTTTAGGTTTTAAAGGACCTTATCCTTTGAGATAACAATACTGTTTTGTTTATGATATGATCGCTGAATCATTTTTATTATTATTTCATTTCATTTTATTTTAATTACTTATTTTCTTTGTAATGATAGAGGAATGTAGTTCTTGGGATGTGGTAAGCGATGTGGATCTATGGGAAAGTGGTGATGCTCTAGATCAAGATGGTTATGTCGTTGTAAAGCAAGAGGATATAGTAGATGGTATTGCTTGCTTCATGGCAGCATATTTGTTGTCCTTAAAGGAAACCAAGGTATGATCACAACAGCTCTCTCTCTCTCTCTCACGTGCACACTCATGTATTCATGCGCATGGATAAATATATAAGAGGTTATGGTTGAAGGTAGGGAAATTCGGATGGTTAGTGGTTTAAAGTGCCTTGGTTTACAATATCCCCAAAACACAGAAAACCTTGTAATTATTTTATCTCCTTCCTCATGCTGTGCCTTAAATGGAGAGTTTTGTTGCTTCACCTATTTTTTCTATTAATCTTCACTGGGGATGTTTTTTAATACCCCTTGCTGGATGATTTAGACCTGGAGATGCCTGATCTCCCTGGCCTCCTTTTGTACACCTTTTAGTTCATCAATGAATCTGTTCTTGCCTCTGAAAAAGAAAATAAGGTGTCTTCGTTCATTATATAAATGAATTGTCTAGCTCTTAATATGGATAAGGGAAGAAGTATTAAGTTTGGATAAAGGATTGGTCTCAAGCTGTGCAGAATAGGCAGAGTTCGACCATCATGGATAGTGACTGAAAAAAAAGTAAGTAATGGTTTATGAGTTCATGGGTTTTTGTGATCACCTATTCAGGATTTTAATATTCCAAAAGTTTCAAATTCTAAATGTTACAGAGCTGGATAATAGTCCCATGTGATTAGCTGAGATGTATGGAAGTTGTTCCGGACTTCTACAGCTATTGAAAGAAAAGATTGATGATAGCTTTATGGTTTAGTGAAATTTGGGCATGCGGTTTGTGGAATTTTAAGCACCTATGAGTTTTATGTTTCAGCATGTATTTTAAGCATCTATGAGTTTTGTGTTTCAGTATGCATATGTTGGAGCTAAATATATATTGACCCCTTTTCTCGGTCTAATCCAAAAGAAAGAGTGGTTTCTTCCAGATTGGATAGATTTTTAATATCTGATGCGTTTGGGAATTTGTAATAACTCCACACACCACCGCCAAATTTCTTTGGAAACAGGAAACTTGAAGTTTGGCCTTTGTTTTTTTTTTTTTGGTTGGGTGGGGGGTGCAAATCGTGGATCCAATTTTGGTTTGGATATTCTTTAAGTTCTTTGTCTAAACTGTGGATGTAATCATGTAAGTTGCTTGTGGCAACGCTTGTGGATTGAGGGGATTTCCTCCTTTTATGTAACTTCCATTTTTTGACAAAATCGTTTCTTTTCTTGATTTGAAATATTGTTGGCATTCGTGGGTTTGACTCTGCCAGGTGAAATGAATAATGAGGATATTGCTTTTACATGACATCCCAAGAAAATCGTGTTTGTCATGCCGATGCTTCCACTAATTCTGGTTCTTTATAAAAATTATAATACTCCCATCATGTTCCTTGTCTATAACAAAGAGAATATGGCTACTGGAAATTATCTTTCATATTTATCTTGTCTTAGAAGAAAACCAAAACATGCCAGTTATGTATGAGCTATGAGCCTATGATCAACCTTTTCATGTGTTCTCATTGTCTAACAGGAATTGTCACCCAACCAGCTGCAGAATGGTGAGTCTCACCACTATTTCTTGTTGACGTGATGGTTTTAGATTTCATTTGCTCCCAATCCATGTTATGACCAAATTTTTCACTAAATTTTGATTATCTCTGGAATGTCATGCAGCCCTTTGCAAAACGTTCTCAGTGAAGAAGAGAAAAGGAAAACTCCGGAAGGCATGGGATGGGAGCAAGGTCATTTATAACGTGGCATCTTGGGGAGCTACTGCAGTTGGGTACGTTAATCAACTAGTGTGACTGAATTATATCATATGTAAAAGTTCTTGCATTTAGCACTAAATGATTCTTCATTGTATGGGCCACTAAGACAATTCAAAATGCTGTTGCTTGATGAGTTTCCTTCAACTTTCCCTGGTATTGTTTTTCTGCAATGATACTGTTCCTTTAGCATAAGCTGGACGAGCATAAAGAATTGCCCGTGATGTGGCAATTTGACACTAGCACCAGTTGGACCGCGTAACATTTTCCTCAAAACTTTTGTTTTATGCATTCACGTCGTACTCATACTAAAAGATTTTTATTTATTTGTTTGATTTCTTGTATTTATATCAATATAAATACGTATTAATATTAGCCTAAAATGTTTGAATTTCTTCTTCTGGAACTGAAAGAATACAATATACAATATTTTGCTGATGGTTCCTGCAACTGATATGCTACAGGATATACCAGAACCCTGTTATTCTAAACGCTGCATCTAAAGCCTTCTGGACTTCCTGCCAAGTAATCTCAAAGCTTCTC

mRNA sequence

ATGGAGGTTGAGGTATCCGATCCAAACCCGGATATCGGCGATATTAGTAAGAGGAAGAATTTGGAGAGCCCGGCTGATGATCGAGTTCGTGTGAAGAAGAAGACCTTGCAGGCTGTGCTAGAGCAGTGCCAGAGAGCTCTCGAATTGCTTAATAACTCCAACGGTGTCGATGAAAACGAGGGAAATTATGCGAGTGGCGATGGGGATGAAGATGATCAGCTCGGTGAAGCCGACGAGTTGTGTGATCTTCTTAAATCTAAAGTTGAATGCCGTGACTTTCTAGAAAAGCTAGAGGATGCTCAAGCGTCAGTTCCGCAAAATACATCTGAGGAATGTAGTTCTTGGGATGTGGTAAGCGATGTGGATCTATGGGAAAGTGGTGATGCTCTAGATCAAGATGGTTATGTCGTTGTAAAGCAAGAGGATATAGTAGATGGTATTGCTTGCTTCATGGCAGCATATTTGTTGTCCTTAAAGGAAACCAAGGAATTGTCACCCAACCAGCTGCAGAATGCCCTTTGCAAAACGTTCTCAGTGAAGAAGAGAAAAGGAAAACTCCGGAAGGCATGGGATGGGAGCAAGGTCATTTATAACGTGGCATCTTGGGGAGCTACTGCAGTTGGGATATACCAGAACCCTGTTATTCTAAACGCTGCATCTAAAGCCTTCTGGACTTCCTGCCAAGTAATCTCAAAGCTTCTC

Coding sequence (CDS)

ATGGAGGTTGAGGTATCCGATCCAAACCCGGATATCGGCGATATTAGTAAGAGGAAGAATTTGGAGAGCCCGGCTGATGATCGAGTTCGTGTGAAGAAGAAGACCTTGCAGGCTGTGCTAGAGCAGTGCCAGAGAGCTCTCGAATTGCTTAATAACTCCAACGGTGTCGATGAAAACGAGGGAAATTATGCGAGTGGCGATGGGGATGAAGATGATCAGCTCGGTGAAGCCGACGAGTTGTGTGATCTTCTTAAATCTAAAGTTGAATGCCGTGACTTTCTAGAAAAGCTAGAGGATGCTCAAGCGTCAGTTCCGCAAAATACATCTGAGGAATGTAGTTCTTGGGATGTGGTAAGCGATGTGGATCTATGGGAAAGTGGTGATGCTCTAGATCAAGATGGTTATGTCGTTGTAAAGCAAGAGGATATAGTAGATGGTATTGCTTGCTTCATGGCAGCATATTTGTTGTCCTTAAAGGAAACCAAGGAATTGTCACCCAACCAGCTGCAGAATGCCCTTTGCAAAACGTTCTCAGTGAAGAAGAGAAAAGGAAAACTCCGGAAGGCATGGGATGGGAGCAAGGTCATTTATAACGTGGCATCTTGGGGAGCTACTGCAGTTGGGATATACCAGAACCCTGTTATTCTAAACGCTGCATCTAAAGCCTTCTGGACTTCCTGCCAAGTAATCTCAAAGCTTCTC

Protein sequence

MEVEVSDPNPDIGDISKRKNLESPADDRVRVKKKTLQAVLEQCQRALELLNNSNGVDENEGNYASGDGDEDDQLGEADELCDLLKSKVECRDFLEKLEDAQASVPQNTSEECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQNALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVISKLL

Homology

[Close]

BLAST of MS001164.1 vs. NCBI nr
Match: XP_022131799.1 (uncharacterized protein LOC111004869 [Momordica charantia])

HSP 1 Score: 447.6 bits (1150), Expect = 6.7e-122
Identity = 230/234 (98.29%), Postives = 230/234 (98.29%), Query Frame = 0


Query: 1   MEVEVSDPNPDIGDISKRKNLESPADDRVRVKKKTLQAVLEQCQRALELLNNSNGVDENE 60
           MEVEVSDPN D GDISKRKNLESP DDRVRVKKKTLQAVLEQCQRALELLNNSNGVDENE
Sbjct: 1   MEVEVSDPNSDTGDISKRKNLESPTDDRVRVKKKTLQAVLEQCQRALELLNNSNGVDENE 60

Query: 61  GNYASGDGDEDDQLGEADELCDLLKSKVECRDFLEKLEDAQASVPQNTSEECSSWDVVSD 120
           GN ASGDGDEDDQLGEADELCDLLKSKVECRDFLEKLEDAQASVPQNTSEECSSWDVVSD
Sbjct: 61  GNDASGDGDEDDQLGEADELCDLLKSKVECRDFLEKLEDAQASVPQNTSEECSSWDVVSD 120

Query: 121 VDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQNALCKTFSVK 180
           VDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQNALCKTFSVK
Sbjct: 121 VDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQNALCKTFSVK 180

Query: 181 KRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVISKLL 235
           KRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVISKLL
Sbjct: 181 KRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVISKLL 234

[Close]

BLAST of MS001164.1 vs. NCBI nr
Match: KAG7020240.1 (hypothetical protein SDJN02_16923 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 388.3 bits (996), Expect = 4.8e-104
Identity = 208/244 (85.25%), Postives = 214/244 (87.70%), Query Frame = 0


Query: 1   MEVEVSDPNPDIGDISKRKNLESPADDRVRVKKKTLQAVLEQCQRALELLNNSNGVDENE 60
           M+VEV  P  +  D SKRKN E P  D VRVKKKTLQAVLEQCQRALE LN+SNG+DE+E
Sbjct: 1   MDVEVPKPKSNFVDNSKRKNFEGPIGDGVRVKKKTLQAVLEQCQRALESLNDSNGLDESE 60

Query: 61  GNYASGDGDEDDQLG----------EADELCDLLKSKVECRDFLEKLEDAQASVPQNTSE 120
           GN   G  DEDD+LG          EADELCDLLKSKVECRDFLEKLEDAQA VPQNT E
Sbjct: 61  GN--DGGEDEDDRLGEGSESVRGDREADELCDLLKSKVECRDFLEKLEDAQALVPQNTLE 120

Query: 121 ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ 180
           ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ
Sbjct: 121 ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ 180

Query: 181 NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI 235
           NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI
Sbjct: 181 NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI 240

[Close]

BLAST of MS001164.1 vs. NCBI nr
Match: XP_022951284.1 (uncharacterized protein LOC111454166 isoform X1 [Cucurbita moschata])

HSP 1 Score: 386.7 bits (992), Expect = 1.4e-103
Identity = 207/244 (84.84%), Postives = 213/244 (87.30%), Query Frame = 0


Query: 1   MEVEVSDPNPDIGDISKRKNLESPADDRVRVKKKTLQAVLEQCQRALELLNNSNGVDENE 60
           M+ EV  P  +  D SKRKN E P  D VRVKKKTLQAVLEQCQRALE LN+SNG+DE+E
Sbjct: 1   MDAEVPKPKSNFVDNSKRKNFEGPIGDGVRVKKKTLQAVLEQCQRALESLNDSNGLDESE 60

Query: 61  GNYASGDGDEDDQLG----------EADELCDLLKSKVECRDFLEKLEDAQASVPQNTSE 120
           GN   G  DEDD+LG          EADELCDLLKSKVECRDFLEKLEDAQA VPQNT E
Sbjct: 61  GN--DGGEDEDDRLGEGSESVRGDREADELCDLLKSKVECRDFLEKLEDAQALVPQNTLE 120

Query: 121 ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ 180
           ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ
Sbjct: 121 ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ 180

Query: 181 NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI 235
           NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI
Sbjct: 181 NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI 240

[Close]

BLAST of MS001164.1 vs. NCBI nr
Match: XP_023001930.1 (uncharacterized protein LOC111495960 isoform X1 [Cucurbita maxima])

HSP 1 Score: 384.8 bits (987), Expect = 5.3e-103
Identity = 206/244 (84.43%), Postives = 212/244 (86.89%), Query Frame = 0


Query: 1   MEVEVSDPNPDIGDISKRKNLESPADDRVRVKKKTLQAVLEQCQRALELLNNSNGVDENE 60
           M+ EV  P  +  D SKRKN E P  D VRV KKTLQAVLEQCQRALE LN+SNG+DE+E
Sbjct: 1   MDAEVPKPKSNFVDNSKRKNFEGPIGDGVRVNKKTLQAVLEQCQRALESLNDSNGLDESE 60

Query: 61  GNYASGDGDEDDQLG----------EADELCDLLKSKVECRDFLEKLEDAQASVPQNTSE 120
           GN   G  DEDD+LG          EADELCDLLKSKVECRDFLEKLEDAQA VPQNT E
Sbjct: 61  GN--DGGEDEDDRLGEGSESVRGDREADELCDLLKSKVECRDFLEKLEDAQALVPQNTLE 120

Query: 121 ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ 180
           ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ
Sbjct: 121 ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ 180

Query: 181 NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI 235
           NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI
Sbjct: 181 NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI 240

[Close]

BLAST of MS001164.1 vs. NCBI nr
Match: XP_023537176.1 (uncharacterized protein LOC111798335 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.0 bits (985), Expect = 9.0e-103
Identity = 206/244 (84.43%), Postives = 213/244 (87.30%), Query Frame = 0


Query: 1   MEVEVSDPNPDIGDISKRKNLESPADDRVRVKKKTLQAVLEQCQRALELLNNSNGVDENE 60
           M+ EV  P  +  D SKRK+ E P  D VRVKKKTLQAVLEQCQRALE LN+SNG+DE+E
Sbjct: 1   MDAEVPKPKSNSVDNSKRKDFEGPIGDGVRVKKKTLQAVLEQCQRALESLNDSNGLDESE 60

Query: 61  GNYASGDGDEDDQLG----------EADELCDLLKSKVECRDFLEKLEDAQASVPQNTSE 120
           GN   G  DEDD+LG          EADELCDLLKSKVECRDFLEKLEDAQA VPQNT E
Sbjct: 61  GN--DGGEDEDDRLGEGSESVRGDREADELCDLLKSKVECRDFLEKLEDAQALVPQNTLE 120

Query: 121 ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ 180
           ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ
Sbjct: 121 ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ 180

Query: 181 NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI 235
           NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI
Sbjct: 181 NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI 240

[Close]

BLAST of MS001164.1 vs. ExPASy TrEMBL
Match: A0A6J1BRA5 (uncharacterized protein LOC111004869 OS=Momordica charantia OX=3673 GN=LOC111004869 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 3.2e-122
Identity = 230/234 (98.29%), Postives = 230/234 (98.29%), Query Frame = 0


Query: 1   MEVEVSDPNPDIGDISKRKNLESPADDRVRVKKKTLQAVLEQCQRALELLNNSNGVDENE 60
           MEVEVSDPN D GDISKRKNLESP DDRVRVKKKTLQAVLEQCQRALELLNNSNGVDENE
Sbjct: 1   MEVEVSDPNSDTGDISKRKNLESPTDDRVRVKKKTLQAVLEQCQRALELLNNSNGVDENE 60

Query: 61  GNYASGDGDEDDQLGEADELCDLLKSKVECRDFLEKLEDAQASVPQNTSEECSSWDVVSD 120
           GN ASGDGDEDDQLGEADELCDLLKSKVECRDFLEKLEDAQASVPQNTSEECSSWDVVSD
Sbjct: 61  GNDASGDGDEDDQLGEADELCDLLKSKVECRDFLEKLEDAQASVPQNTSEECSSWDVVSD 120

Query: 121 VDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQNALCKTFSVK 180
           VDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQNALCKTFSVK
Sbjct: 121 VDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQNALCKTFSVK 180

Query: 181 KRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVISKLL 235
           KRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVISKLL
Sbjct: 181 KRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVISKLL 234

[Close]

BLAST of MS001164.1 vs. ExPASy TrEMBL
Match: A0A6J1GI90 (uncharacterized protein LOC111454166 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454166 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 6.8e-104
Identity = 207/244 (84.84%), Postives = 213/244 (87.30%), Query Frame = 0


Query: 1   MEVEVSDPNPDIGDISKRKNLESPADDRVRVKKKTLQAVLEQCQRALELLNNSNGVDENE 60
           M+ EV  P  +  D SKRKN E P  D VRVKKKTLQAVLEQCQRALE LN+SNG+DE+E
Sbjct: 1   MDAEVPKPKSNFVDNSKRKNFEGPIGDGVRVKKKTLQAVLEQCQRALESLNDSNGLDESE 60

Query: 61  GNYASGDGDEDDQLG----------EADELCDLLKSKVECRDFLEKLEDAQASVPQNTSE 120
           GN   G  DEDD+LG          EADELCDLLKSKVECRDFLEKLEDAQA VPQNT E
Sbjct: 61  GN--DGGEDEDDRLGEGSESVRGDREADELCDLLKSKVECRDFLEKLEDAQALVPQNTLE 120

Query: 121 ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ 180
           ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ
Sbjct: 121 ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ 180

Query: 181 NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI 235
           NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI
Sbjct: 181 NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI 240

[Close]

BLAST of MS001164.1 vs. ExPASy TrEMBL
Match: A0A6J1KMI8 (uncharacterized protein LOC111495960 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495960 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.6e-103
Identity = 206/244 (84.43%), Postives = 212/244 (86.89%), Query Frame = 0


Query: 1   MEVEVSDPNPDIGDISKRKNLESPADDRVRVKKKTLQAVLEQCQRALELLNNSNGVDENE 60
           M+ EV  P  +  D SKRKN E P  D VRV KKTLQAVLEQCQRALE LN+SNG+DE+E
Sbjct: 1   MDAEVPKPKSNFVDNSKRKNFEGPIGDGVRVNKKTLQAVLEQCQRALESLNDSNGLDESE 60

Query: 61  GNYASGDGDEDDQLG----------EADELCDLLKSKVECRDFLEKLEDAQASVPQNTSE 120
           GN   G  DEDD+LG          EADELCDLLKSKVECRDFLEKLEDAQA VPQNT E
Sbjct: 61  GN--DGGEDEDDRLGEGSESVRGDREADELCDLLKSKVECRDFLEKLEDAQALVPQNTLE 120

Query: 121 ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ 180
           ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ
Sbjct: 121 ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ 180

Query: 181 NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI 235
           NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI
Sbjct: 181 NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI 240

[Close]

BLAST of MS001164.1 vs. ExPASy TrEMBL
Match: A0A6J1GH56 (uncharacterized protein LOC111454166 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454166 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.3e-102
Identity = 206/244 (84.43%), Postives = 212/244 (86.89%), Query Frame = 0


Query: 1   MEVEVSDPNPDIGDISKRKNLESPADDRVRVKKKTLQAVLEQCQRALELLNNSNGVDENE 60
           M+ EV  P  +  D SKRKN E P  D VRVKKKTLQAVLEQCQRALE LN+SNG+DE+E
Sbjct: 1   MDAEVPKPKSNFVDNSKRKNFEGPIGDGVRVKKKTLQAVLEQCQRALESLNDSNGLDESE 60

Query: 61  GNYASGDGDEDDQLG----------EADELCDLLKSKVECRDFLEKLEDAQASVPQNTSE 120
           GN   G  DEDD+LG          EADELCDLLKSKVECRDFLEKLEDAQA VPQNT  
Sbjct: 61  GN--DGGEDEDDRLGEGSESVRGDREADELCDLLKSKVECRDFLEKLEDAQALVPQNTL- 120

Query: 121 ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ 180
           ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ
Sbjct: 121 ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ 180

Query: 181 NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI 235
           NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI
Sbjct: 181 NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI 240

[Close]

BLAST of MS001164.1 vs. ExPASy TrEMBL
Match: A0A6J1KK08 (uncharacterized protein LOC111495960 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495960 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.4e-101
Identity = 205/244 (84.02%), Postives = 211/244 (86.48%), Query Frame = 0


Query: 1   MEVEVSDPNPDIGDISKRKNLESPADDRVRVKKKTLQAVLEQCQRALELLNNSNGVDENE 60
           M+ EV  P  +  D SKRKN E P  D VRV KKTLQAVLEQCQRALE LN+SNG+DE+E
Sbjct: 1   MDAEVPKPKSNFVDNSKRKNFEGPIGDGVRVNKKTLQAVLEQCQRALESLNDSNGLDESE 60

Query: 61  GNYASGDGDEDDQLG----------EADELCDLLKSKVECRDFLEKLEDAQASVPQNTSE 120
           GN   G  DEDD+LG          EADELCDLLKSKVECRDFLEKLEDAQA VPQNT  
Sbjct: 61  GN--DGGEDEDDRLGEGSESVRGDREADELCDLLKSKVECRDFLEKLEDAQALVPQNTL- 120

Query: 121 ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ 180
           ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ
Sbjct: 121 ECSSWDVVSDVDLWESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQ 180

Query: 181 NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI 235
           NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI
Sbjct: 181 NALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVI 240

[Close]

BLAST of MS001164.1 vs. TAIR 10
Match: AT5G49710.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 248.4 bits (633), Expect = 5.5e-66
Identity = 135/221 (61.09%), Postives = 164/221 (74.21%), Query Frame = 0


Query: 27  DRVRVKKKTLQAVLEQCQRALELLN---NSNGVDENEGNYASGDGDE---------DDQL 86
           D +RVK+KTLQA+L  CQRALELLN    S+  DE++ +   G G +         D + 
Sbjct: 15  DNIRVKRKTLQALLNDCQRALELLNLAEVSSEDDEDDKSTGEGSGSQESRGEVSSSDRED 74

Query: 87  GEADELCDLLKSKVECRDFLEKLEDAQASVPQNTSEECSSWDVVSDVDLWESGD-ALDQD 146
            EADEL DL+KS+VEC DFLEK+E AQ S PQ+ +E+ SSWDVVS+ DLW+    A  ++
Sbjct: 75  PEADELYDLIKSRVECDDFLEKIESAQVSAPQHLAEDSSSWDVVSEDDLWDDETMAQREE 134

Query: 147 GYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQNALCKTFSVKKRKGKLRKAWDGS 206
            YV+V++EDI +GIACFMA YL SLK+TK+L+P QLQ AL + FSVK RKGKLRKAWDGS
Sbjct: 135 DYVLVREEDIAEGIACFMATYLQSLKQTKDLTPEQLQKALSRMFSVKNRKGKLRKAWDGS 194

Query: 207 KVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVISKLL 235
           KV YNVASW AT +GIYQNPVIL  ASKAFW SC VISKL+
Sbjct: 195 KVAYNVASWSATVIGIYQNPVILRVASKAFWASCHVISKLV 235

[Close]

BLAST of MS001164.1 vs. TAIR 10
Match: AT4G24590.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49710.3); Has 105 Blast hits to 105 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 3; Plants - 85; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 244.6 bits (623), Expect = 8.0e-65
Identity = 142/248 (57.26%), Postives = 172/248 (69.35%), Query Frame = 0


Query: 1   MEVEVSDPNPDIGDISKRKNLESPADDRVRVKKKTLQAVLEQCQRALELLNNSNGVDENE 60
           ME+EVS    D      R +L+S     +RVK+KTLQ +L  CQRALELL      DEN 
Sbjct: 1   MEIEVSCSTHDAETKGNRIDLDS-----IRVKRKTLQNLLADCQRALELLELPG--DENG 60

Query: 61  GNYASGDGDEDDQLG-------------EADELCDLLKSKVECRDFLEKLEDAQASVPQN 120
           G  +    +E+++               EAD+  DL+KS+VEC DF EK+E AQ SVPQ 
Sbjct: 61  GEQSESPEEEEEEESDREEPSASDPGDPEADKFYDLIKSRVECNDFREKIELAQVSVPQV 120

Query: 121 TSEECSSWDVVSDVDLW-ESGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSP 180
            +E+ SSWDVVS+ DLW E      +D YVVV++EDI DGIACFMA YL SLK+TK++SP
Sbjct: 121 LAEDSSSWDVVSEDDLWDEECVGQTEDDYVVVREEDIADGIACFMATYLSSLKQTKDISP 180

Query: 181 NQLQNALCKTFSVKKRKGKLRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTS 235
           +QLQ AL   FSVKKRKGKLRKAW+GSKVIYNVASW ATA+GIYQNP+IL+ ASKAFW S
Sbjct: 181 DQLQKALSTMFSVKKRKGKLRKAWEGSKVIYNVASWSATAIGIYQNPMILSIASKAFWMS 240

[Close]

BLAST of MS001164.1 vs. TAIR 10
Match: AT5G49710.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 242.3 bits (617), Expect = 4.0e-64
Identity = 134/221 (60.63%), Postives = 163/221 (73.76%), Query Frame = 0


Query: 27  DRVRVKKKTLQAVLEQCQRALELLN---NSNGVDENEGNYASGDGDE---------DDQL 86
           D +RVK+KTLQA+L  CQRALELLN    S+  DE++ +   G G +         D + 
Sbjct: 15  DNIRVKRKTLQALLNDCQRALELLNLAEVSSEDDEDDKSTGEGSGSQESRGEVSSSDRED 74

Query: 87  GEADELCDLLKSKVECRDFLEKLEDAQASVPQNTSEECSSWDVVSDVDLWESGD-ALDQD 146
            EADEL DL+KS+VEC DFLEK+E AQ S PQ+ ++  SSWDVVS+ DLW+    A  ++
Sbjct: 75  PEADELYDLIKSRVECDDFLEKIESAQVSAPQHLADS-SSWDVVSEDDLWDDETMAQREE 134

Query: 147 GYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQNALCKTFSVKKRKGKLRKAWDGS 206
            YV+V++EDI +GIACFMA YL SLK+TK+L+P QLQ AL + FSVK RKGKLRKAWDGS
Sbjct: 135 DYVLVREEDIAEGIACFMATYLQSLKQTKDLTPEQLQKALSRMFSVKNRKGKLRKAWDGS 194

Query: 207 KVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVISKLL 235
           KV YNVASW AT +GIYQNPVIL  ASKAFW SC VISKL+
Sbjct: 195 KVAYNVASWSATVIGIYQNPVILRVASKAFWASCHVISKLV 234

[Close]

BLAST of MS001164.1 vs. TAIR 10
Match: AT5G49710.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 149.4 bits (376), Expect = 3.5e-36
Identity = 85/160 (53.12%), Postives = 112/160 (70.00%), Query Frame = 0


Query: 27  DRVRVKKKTLQAVLEQCQRALELLN---NSNGVDENEGNYASGDGDE---------DDQL 86
           D +RVK+KTLQA+L  CQRALELLN    S+  DE++ +   G G +         D + 
Sbjct: 15  DNIRVKRKTLQALLNDCQRALELLNLAEVSSEDDEDDKSTGEGSGSQESRGEVSSSDRED 74

Query: 87  GEADELCDLLKSKVECRDFLEKLEDAQASVPQNTSEECSSWDVVSDVDLWESGD-ALDQD 146
            EADEL DL+KS+VEC DFLEK+E AQ S PQ+ +E+ SSWDVVS+ DLW+    A  ++
Sbjct: 75  PEADELYDLIKSRVECDDFLEKIESAQVSAPQHLAEDSSSWDVVSEDDLWDDETMAQREE 134

Query: 147 GYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQNAL 174
            YV+V++EDI +GIACFMA YL SLK+TK+L+P QLQ  +
Sbjct: 135 DYVLVREEDIAEGIACFMATYLQSLKQTKDLTPEQLQKGI 174

[Close]

BLAST of MS001164.1 vs. TAIR 10
Match: AT1G44770.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49710.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-11
Identity = 56/229 (24.45%), Postives = 104/229 (45.41%), Query Frame = 0


Query: 32  KKKTLQAVLEQCQRALELLNNSNGVDENEGNYASGDGDEDDQLGEADELCDLLKSKVECR 91
           + + L+A+ ++ +R   LL ++  + E     A+   D         +L   L + V  R
Sbjct: 48  RDRELEALRQENRRLRTLLESNLKLFETLAESAAFSHD------CPSDLYARLVTMVTSR 107

Query: 92  DFLEKLEDAQASVPQNTS-----------------------EECSSWDVVSD---VDLWE 151
           DFL +LE+ + ++   T                        +E S W +V+D       E
Sbjct: 108 DFLARLENLRQALSNGTQNQFPFKEPTDDVKTVEVLIEMDHQEPSWWVLVTDDMVPSNVE 167

Query: 152 SGDALDQDGYVVVKQEDIVDGIACFMAAYLLSLKETKELSPNQLQNALCKTFSVKKRKGK 211
              A+D + Y+VV +E ++D +A F+A  ++S  + K L P +LQ  L +  +   + GK
Sbjct: 168 EQSAIDNEHYIVVNEEHVIDAVAHFLAKCIMSNPKAKNLKPEELQKLLVQEVTALSKVGK 227

Query: 212 LRKAWDGSKVIYNVASWGATAVGIYQNPVILNAASKAFWTSCQVISKLL 235
           +   W   K+ Y +++WG    G+YQ   +L  A+K    + +V+ + L
Sbjct: 228 VVDIWHAGKMFYTLSTWGLAFGGLYQARGVLKIAAKGVHATSKVVLRAL 270

The following BLAST results are available for this feature:

BLAST of MS001164.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131799.1	6.7e-122	98.29	uncharacterized protein LOC111004869 [Momordica charantia]	[more]
KAG7020240.1	4.8e-104	85.25	hypothetical protein SDJN02_16923 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022951284.1	1.4e-103	84.84	uncharacterized protein LOC111454166 isoform X1 [Cucurbita moschata]	[more]
XP_023001930.1	5.3e-103	84.43	uncharacterized protein LOC111495960 isoform X1 [Cucurbita maxima]	[more]
XP_023537176.1	9.0e-103	84.43	uncharacterized protein LOC111798335 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS001164.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS001164.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BRA5	3.2e-122	98.29	uncharacterized protein LOC111004869 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A6J1GI90	6.8e-104	84.84	uncharacterized protein LOC111454166 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KMI8	2.6e-103	84.43	uncharacterized protein LOC111495960 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GH56	6.3e-102	84.43	uncharacterized protein LOC111454166 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KK08	2.4e-101	84.02	uncharacterized protein LOC111495960 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MS001164.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49710.3	5.5e-66	61.09	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G24590.1	8.0e-65	57.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G49710.1	4.0e-64	60.63	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G49710.2	3.5e-36	53.13	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G44770.2	1.7e-11	24.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 33..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..28
None	No IPR available	PANTHER	PTHR33874:SF1	RING FINGER PROTEIN	coord: 1..234
None	No IPR available	PANTHER	PTHR33874	RING FINGER PROTEIN	coord: 1..234

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS001164	MS001164	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS001164.1-cds	MS001164.1-cds-scaffold36:1940183..1940419	CDS
MS001164.1-cds	MS001164.1-cds-scaffold36:1941634..1941724	CDS
MS001164.1-cds	MS001164.1-cds-scaffold36:1941902..1942059	CDS
MS001164.1-cds	MS001164.1-cds-scaffold36:1943520..1943547	CDS
MS001164.1-cds	MS001164.1-cds-scaffold36:1943663..1943771	CDS
MS001164.1-cds	MS001164.1-cds-scaffold36:1944219..1944297	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS001164.1	MS001164.1-protein	polypeptide