MS000955.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS000955.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	F-box protein SKIP14-like
Location	scaffold36: 454927 .. 457304 (+)
Sequence length	1413
RNA-Seq Expression	MS000955.1
Synteny	MS000955.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTTAATTTTTCTCGTCGTCCTACATTTCCCCTGCACTTTTCTGAGGACAGTTTAGTTTCACCAATGAGGATTGCCAATGGTTACATTGTCGAAGGCATTCATGAGAATAATACCGAAAGCTGTGGGAAGTCGTGGCATCATGGCCGGGAGGTGGATGATTGCTTTGATCACGGAAGGGATATGTGCCCAGATAGCTCGCAGGACCCTGTCTCCAAGGACATTCTTGATCTTTTACCTGCGGATCCCTTTGGCATGGATATAAGTACCACTTTTACAGCAATTACTGGATGGCTCGAGGACCTGGAAGTGGACTATGCTGGGTGTGTCAGCGATGGGGGTGGTGCTGGTGAAGGGAATATCGAGTTATTCGCAGGTCTGAATTTTTTTTGGAACAATGCTTTGAAGTTTCAAGCGTTTCCGGAAATTAAAGGAATTGGTCAGAATCCTGATCAAATTTGTAGCTATGATGAGTGTCTGAATGGAAAGGGAACTGAAGGTGCAAGCTGCTGTTGTGATTTTGAATCTATCTGTAGTATGGATGGAGTATCGTTTGCTAATAACGATCCTCCTAGCTTTACTGGGCAGCAGGCTGCGGAGTGTCAGGAGCAGAATTGCATCTATCCGGAGGTAGATGGAGGAGCTCCTCATGCAGCCTTGAACTTTGTCCTTTATTATCTGGGTGTTCAGGATCTACTCTCTGTTGGAAGGGTTTGCAGATCTCTGCATTCAGCAGTAAGAGAAGACCCCCTTATATGGAGGCACATACACATAGATCAACCGTTGAATGAGAAGATTACAGATGACATTCTTTTGCTATTAACTAATAGGGCTCAGGGTAACCTGCAATGCTTGAGTCTGCTGGAATGCCCAGGAATTACTGATGACGGTCTGAAGCGTGTGCTTGAAAGCAATCCTAGGCTTACAAAAGTTAGTATAACTTATTTTAATTTGGGCTCTTTTTTATTTAGCTGAATCCATCTTATTGTTGAATTTGTAATGGCTATATTTGTTTCATCCCTTCACGTTGTGGTAAATAGTTTATTCTTCTTTATCTTTGCACTTGAATATGTTACATAGTTTAGTTATAAGCCTTTATCTGCGCTTTTAAAAAAATATATAAAAGCTTGATGTTATTTATCATACCATGACCAGTCAGCCTTGTACTTATTTTTTGCGTACTGTTATCTAACATTTGTTTGTAGATTTGATCACTGCCAGAGTTTTTTTTTAAGGAATTTATGCAACTGTTTTATATGTAAATGTTATACCTTAATTTCGTCTTGAGAGTGCCTGTTGGTTGTTGAGAAGGTTTAAAAAACTTTAGTTTGTGATATCTAGAGTAGAGGTCTCTAGATGTTAAGTGCAGGGTCCTATCAGCTCTTTGGTAGAACTTAGTATTGGTTTCATTCTGGCAAGGAGTGTACAATAGTTTAGAAATTTCCCAAAAAATTTTATTTTCTTTTAATTGGAATGGTTTTCTTTAGAAACAGATACTTTTCATTAGTGCAGTAAAGAGTAATACAAATATTGGGAAACTTATATCCTTCTTGGAGCTTATAAAAACCAAGTCTTTGAATTGGAACCACTAATGATAGGTTCTGTTGTTTAGGATGTCTTATGCTAATAGCCACAAAGTAGCTCATTGTCTAAGAACCGCATATACACTGAAACTTACCATTTTTTAAAATTAGGACAGGAATATGGTTGGGGCATGTTCAAGAAGATGTATTTTTAACATATGTCTGACCCTAACACTATGCTAAAAATAGTGTCCTTGCTGGACACTATTTTGTGCAAAGAGTGAATATGCAATTTCCTTCCTAACGCTACATCATACTTTTCACTTACCAACTGAGCATGTTGCTAAAGTATTTGTCTGCATGTTTATGCAGTTGTCTGTTCCTAGATGTACTAGACTCAGTATTGAAGGTGTTGTTAGTAGCTTGAGGGCTTTCAAGCTGATTGGTACCCAAGGAGTGAAACATCTAAGAATTGGTGGATTATATGGGTTGACCCTCGAGCATTTTGAAGAGTTGAAGTTCTTATTGGGAACTGAACGCAGCGCTATGCAGCAAAATTCTTACAAGCCACATTTTTATCACAGGGGAAACTTTTATGTGTCTTGTGATGATGACCGTCCTATTGATATTGAAAAATGTCCAAGATGCCAAAATCTGAGACTTGTTTATGATTGCCCAATAGAGGGTTGTCAGGGAAAGGAACATGTAACTCAGGCATGCAGGGCATGTACGCTTTGTATATTGCGGTGTGTCCAGTGTGGTCGATGCATCAATGAAAATGAGTATGTGGAAACATTTTGTTTGGAATTGCTCTGCTCAGATTGCTGGAAGCCATGTCAAGAGAAACGGGAT

mRNA sequence

ATGGCTCTTAATTTTTCTCGTCGTCCTACATTTCCCCTGCACTTTTCTGAGGACAGTTTAGTTTCACCAATGAGGATTGCCAATGGTTACATTGTCGAAGGCATTCATGAGAATAATACCGAAAGCTGTGGGAAGTCGTGGCATCATGGCCGGGAGGTGGATGATTGCTTTGATCACGGAAGGGATATGTGCCCAGATAGCTCGCAGGACCCTGTCTCCAAGGACATTCTTGATCTTTTACCTGCGGATCCCTTTGGCATGGATATAAGTACCACTTTTACAGCAATTACTGGATGGCTCGAGGACCTGGAAGTGGACTATGCTGGGTGTGTCAGCGATGGGGGTGGTGCTGGTGAAGGGAATATCGAGTTATTCGCAGGTCTGAATTTTTTTTGGAACAATGCTTTGAAGTTTCAAGCGTTTCCGGAAATTAAAGGAATTGGTCAGAATCCTGATCAAATTTGTAGCTATGATGAGTGTCTGAATGGAAAGGGAACTGAAGGTGCAAGCTGCTGTTGTGATTTTGAATCTATCTGTAGTATGGATGGAGTATCGTTTGCTAATAACGATCCTCCTAGCTTTACTGGGCAGCAGGCTGCGGAGTGTCAGGAGCAGAATTGCATCTATCCGGAGGTAGATGGAGGAGCTCCTCATGCAGCCTTGAACTTTGTCCTTTATTATCTGGGTGTTCAGGATCTACTCTCTGTTGGAAGGGTTTGCAGATCTCTGCATTCAGCAGTAAGAGAAGACCCCCTTATATGGAGGCACATACACATAGATCAACCGTTGAATGAGAAGATTACAGATGACATTCTTTTGCTATTAACTAATAGGGCTCAGGGTAACCTGCAATGCTTGAGTCTGCTGGAATGCCCAGGAATTACTGATGACGGTCTGAAGCGTGTGCTTGAAAGCAATCCTAGGCTTACAAAATTGTCTGTTCCTAGATGTACTAGACTCAGTATTGAAGGTGTTGTTAGTAGCTTGAGGGCTTTCAAGCTGATTGGTACCCAAGGAGTGAAACATCTAAGAATTGGTGGATTATATGGGTTGACCCTCGAGCATTTTGAAGAGTTGAAGTTCTTATTGGGAACTGAACGCAGCGCTATGCAGCAAAATTCTTACAAGCCACATTTTTATCACAGGGGAAACTTTTATGTGTCTTGTGATGATGACCGTCCTATTGATATTGAAAAATGTCCAAGATGCCAAAATCTGAGACTTGTTTATGATTGCCCAATAGAGGGTTGTCAGGGAAAGGAACATGTAACTCAGGCATGCAGGGCATGTACGCTTTGTATATTGCGGTGTGTCCAGTGTGGTCGATGCATCAATGAAAATGAGTATGTGGAAACATTTTGTTTGGAATTGCTCTGCTCAGATTGCTGGAAGCCATGTCAAGAGAAACGGGAT

Coding sequence (CDS)

ATGGCTCTTAATTTTTCTCGTCGTCCTACATTTCCCCTGCACTTTTCTGAGGACAGTTTAGTTTCACCAATGAGGATTGCCAATGGTTACATTGTCGAAGGCATTCATGAGAATAATACCGAAAGCTGTGGGAAGTCGTGGCATCATGGCCGGGAGGTGGATGATTGCTTTGATCACGGAAGGGATATGTGCCCAGATAGCTCGCAGGACCCTGTCTCCAAGGACATTCTTGATCTTTTACCTGCGGATCCCTTTGGCATGGATATAAGTACCACTTTTACAGCAATTACTGGATGGCTCGAGGACCTGGAAGTGGACTATGCTGGGTGTGTCAGCGATGGGGGTGGTGCTGGTGAAGGGAATATCGAGTTATTCGCAGGTCTGAATTTTTTTTGGAACAATGCTTTGAAGTTTCAAGCGTTTCCGGAAATTAAAGGAATTGGTCAGAATCCTGATCAAATTTGTAGCTATGATGAGTGTCTGAATGGAAAGGGAACTGAAGGTGCAAGCTGCTGTTGTGATTTTGAATCTATCTGTAGTATGGATGGAGTATCGTTTGCTAATAACGATCCTCCTAGCTTTACTGGGCAGCAGGCTGCGGAGTGTCAGGAGCAGAATTGCATCTATCCGGAGGTAGATGGAGGAGCTCCTCATGCAGCCTTGAACTTTGTCCTTTATTATCTGGGTGTTCAGGATCTACTCTCTGTTGGAAGGGTTTGCAGATCTCTGCATTCAGCAGTAAGAGAAGACCCCCTTATATGGAGGCACATACACATAGATCAACCGTTGAATGAGAAGATTACAGATGACATTCTTTTGCTATTAACTAATAGGGCTCAGGGTAACCTGCAATGCTTGAGTCTGCTGGAATGCCCAGGAATTACTGATGACGGTCTGAAGCGTGTGCTTGAAAGCAATCCTAGGCTTACAAAATTGTCTGTTCCTAGATGTACTAGACTCAGTATTGAAGGTGTTGTTAGTAGCTTGAGGGCTTTCAAGCTGATTGGTACCCAAGGAGTGAAACATCTAAGAATTGGTGGATTATATGGGTTGACCCTCGAGCATTTTGAAGAGTTGAAGTTCTTATTGGGAACTGAACGCAGCGCTATGCAGCAAAATTCTTACAAGCCACATTTTTATCACAGGGGAAACTTTTATGTGTCTTGTGATGATGACCGTCCTATTGATATTGAAAAATGTCCAAGATGCCAAAATCTGAGACTTGTTTATGATTGCCCAATAGAGGGTTGTCAGGGAAAGGAACATGTAACTCAGGCATGCAGGGCATGTACGCTTTGTATATTGCGGTGTGTCCAGTGTGGTCGATGCATCAATGAAAATGAGTATGTGGAAACATTTTGTTTGGAATTGCTCTGCTCAGATTGCTGGAAGCCATGTCAAGAGAAACGGGAT

Protein sequence

MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHGRDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVSDGGGAGEGNIELFAGLNFFWNNALKFQAFPEIKGIGQNPDQICSYDECLNGKGTEGASCCCDFESICSMDGVSFANNDPPSFTGQQAAECQEQNCIYPEVDGGAPHAALNFVLYYLGVQDLLSVGRVCRSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQGNLQCLSLLECPGITDDGLKRVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKHLRIGGLYGLTLEHFEELKFLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPIDIEKCPRCQNLRLVYDCPIEGCQGKEHVTQACRACTLCILRCVQCGRCINENEYVETFCLELLCSDCWKPCQEKRD

Homology

[Close]

BLAST of MS000955.1 vs. NCBI nr
Match: XP_022131519.1 (F-box protein SKIP14-like [Momordica charantia])

HSP 1 Score: 996.9 bits (2576), Expect = 5.9e-287
Identity = 468/471 (99.36%), Postives = 469/471 (99.58%), Query Frame = 0


Query: 1   MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHG 60
           MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHG
Sbjct: 1   MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHG 60

Query: 61  RDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVSDGGGAGEG 120
           RDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVSDGG AGEG
Sbjct: 61  RDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVSDGGDAGEG 120

Query: 121 NIELFAGLNFFWNNALKFQAFPEIKGIGQNPDQICSYDECLNGKGTEGASCCCDFESICS 180
           NIELFAGLNFFWNNALKFQAFPEIKGIGQNPDQICSYD CLNGKGTEGASCCCDFESICS
Sbjct: 121 NIELFAGLNFFWNNALKFQAFPEIKGIGQNPDQICSYDGCLNGKGTEGASCCCDFESICS 180

Query: 181 MDGVSFANNDPPSFTGQQAAECQEQNCIYPEVDGGAPHAALNFVLYYLGVQDLLSVGRVC 240
           MDGVSFANNDPPSFTGQQAAECQEQNCIYPEVDGGAPHAALNFVLYYLGVQDLLSVGRVC
Sbjct: 181 MDGVSFANNDPPSFTGQQAAECQEQNCIYPEVDGGAPHAALNFVLYYLGVQDLLSVGRVC 240

Query: 241 RSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQGNLQCLSLLECPGITDDGLK 300
           RSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQG+LQCLSLLECPGITDDGLK
Sbjct: 241 RSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQGSLQCLSLLECPGITDDGLK 300

Query: 301 RVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKHLRIGGLYGLTLEHFEELK 360
           RVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKHLRIGGLYGLTLEHFEELK
Sbjct: 301 RVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKHLRIGGLYGLTLEHFEELK 360

Query: 361 FLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPIDIEKCPRCQNLRLVYDCPIEGCQGK 420
           FLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPIDIEKCPRCQNLRLVYDCPIEGCQGK
Sbjct: 361 FLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPIDIEKCPRCQNLRLVYDCPIEGCQGK 420

Query: 421 EHVTQACRACTLCILRCVQCGRCINENEYVETFCLELLCSDCWKPCQEKRD 472
           EHVTQACRACTLCILRCVQCGRCINENEYVETFCLELLCSDCWKPCQEKRD
Sbjct: 421 EHVTQACRACTLCILRCVQCGRCINENEYVETFCLELLCSDCWKPCQEKRD 471

[Close]

BLAST of MS000955.1 vs. NCBI nr
Match: XP_022961940.1 (F-box protein SKIP14 [Cucurbita moschata])

HSP 1 Score: 802.4 bits (2071), Expect = 2.1e-228
Identity = 380/474 (80.17%), Postives = 415/474 (87.55%), Query Frame = 0


Query: 1   MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHG 60
           MALNFSRRP FPLH SED++VSPMRIANGYIVEGI ENN ESCGKSWH GREVD CFDH 
Sbjct: 1   MALNFSRRPIFPLHLSEDNIVSPMRIANGYIVEGIPENNVESCGKSWHRGREVDACFDHR 60

Query: 61  RDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVSDGGGAGEG 120
            D+C DSSQDPVSKDILD+LPADPFGMDISTTFTA+TGWLED+EVDYA CV DGGG GE 
Sbjct: 61  NDICSDSSQDPVSKDILDILPADPFGMDISTTFTALTGWLEDMEVDYAECVRDGGGTGER 120

Query: 121 NIELFAGLNFFWNNALKFQAFPEIKGIGQNPDQICSYDECLNGKGTEGASCCCDFESICS 180
           N+ELFAGLNFFWNNALKFQAFPEIKGI Q PD +CS D  L+ K T   SC CDF SICS
Sbjct: 121 NVELFAGLNFFWNNALKFQAFPEIKGIVQKPDPMCSCDGFLDEKETGDVSCSCDFRSICS 180

Query: 181 MDGVSFANNDPPSFTGQQAAECQEQNCIYPEVDGGAPHAALNFVLYYLGVQDLLSVGRVC 240
           MD VSFA++DPPS  GQQAAE +EQ+CIY EVDGGAPHA L+F L YLGV+DLLSVGRVC
Sbjct: 181 MDEVSFADDDPPSCCGQQAAESEEQSCIYSEVDGGAPHAGLSFALCYLGVRDLLSVGRVC 240

Query: 241 RSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQGNLQCLSLLECPGITDDGLK 300
            SLHS V+ DPL+WR+IHI+QPLNEKITDDILL L+NRA+GNLQCLSL+ECP ITD+GLK
Sbjct: 241 NSLHSVVQGDPLLWRNIHIEQPLNEKITDDILLQLSNRARGNLQCLSLVECPRITDEGLK 300

Query: 301 RVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKHLRIGGLYGLTLEHFEELK 360
           +VLESNPRLTKLSVP CTRLSIEGVVSSLRAFKL   QGVK LRIGGL+G+T EHFEELK
Sbjct: 301 QVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSIQGVKLLRIGGLFGVTQEHFEELK 360

Query: 361 FLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPIDIEKCPRCQNLRLVYDCPIEGCQGK 420
           FLLG+  S   QNSYKPHFYHRGNFY+SCDD+R IDIEKCPRCQNLRLVYDCP++GCQGK
Sbjct: 361 FLLGSGCSLKPQNSYKPHFYHRGNFYLSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK 420

Query: 421 EHVTQACRACTLCILRCVQCGRCINENEYVETFCLELLCSDCWKP---CQEKRD 472
           E+  QACRACTLCI RC+QCGRCINENE+VETF LELLCS CWKP   CQE+RD
Sbjct: 421 EYAAQACRACTLCISRCIQCGRCINENEFVETFSLELLCSGCWKPSLECQEERD 474

[Close]

BLAST of MS000955.1 vs. NCBI nr
Match: XP_023546191.1 (F-box protein SKIP14 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 797.0 bits (2057), Expect = 9.0e-227
Identity = 378/474 (79.75%), Postives = 413/474 (87.13%), Query Frame = 0


Query: 1   MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHG 60
           MALNFSRRP FPLH SED++VSPMRIANGYIVEGI ENN ESCGKSWH GREVD CFDH 
Sbjct: 1   MALNFSRRPIFPLHLSEDNIVSPMRIANGYIVEGIPENNVESCGKSWHCGREVDACFDHR 60

Query: 61  RDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVSDGGGAGEG 120
            D+C DSSQDPVSKDILD+LPADPFGMDISTTFTA+TGWLED+EVDYA CV DGGG GE 
Sbjct: 61  NDICSDSSQDPVSKDILDILPADPFGMDISTTFTALTGWLEDMEVDYAECVRDGGGTGER 120

Query: 121 NIELFAGLNFFWNNALKFQAFPEIKGIGQNPDQICSYDECLNGKGTEGASCCCDFESICS 180
           N+ELFAGLNFFWNNALKFQAFPEIKGI Q PD +CS D  L+ K T   SC CDF SICS
Sbjct: 121 NVELFAGLNFFWNNALKFQAFPEIKGIVQKPDPMCSCDGFLDEKETGDVSCSCDFRSICS 180

Query: 181 MDGVSFANNDPPSFTGQQAAECQEQNCIYPEVDGGAPHAALNFVLYYLGVQDLLSVGRVC 240
           MD VSFA++DPPS  GQQAAE +EQ+CIY EVDGGAPHA L+F L YLGV+DLLSVGRVC
Sbjct: 181 MDEVSFADDDPPSCCGQQAAESEEQSCIYSEVDGGAPHAGLSFALCYLGVRDLLSVGRVC 240

Query: 241 RSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQGNLQCLSLLECPGITDDGLK 300
           +SLHS V+ DPL+WR+IHI+QPLNEKITDDILL L+NRA GNLQCLSL+ECP ITD+GLK
Sbjct: 241 KSLHSVVQGDPLLWRNIHIEQPLNEKITDDILLQLSNRALGNLQCLSLVECPRITDEGLK 300

Query: 301 RVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKHLRIGGLYGLTLEHFEELK 360
            VLESNPRLTKL VP CTRLSIEGVVSSLRAFKL   QGVK LRIGGL+G+T EHFEELK
Sbjct: 301 HVLESNPRLTKLCVPGCTRLSIEGVVSSLRAFKLTSIQGVKLLRIGGLFGVTQEHFEELK 360

Query: 361 FLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPIDIEKCPRCQNLRLVYDCPIEGCQGK 420
           FLLG+  S   QNSYKPHFYHRGNFYVSCDD+R IDIEKCPRC+NLRLVYDCP++GCQGK
Sbjct: 361 FLLGSGCSLKPQNSYKPHFYHRGNFYVSCDDERAIDIEKCPRCENLRLVYDCPVDGCQGK 420

Query: 421 EHVTQACRACTLCILRCVQCGRCINENEYVETFCLELLCSDCWKP---CQEKRD 472
           E+  QACRACTLCI RC+QCGRCINENE+VETF LELLCS CWKP   C+E+RD
Sbjct: 421 EYAAQACRACTLCISRCIQCGRCINENEFVETFSLELLCSGCWKPSLECREERD 474

[Close]

BLAST of MS000955.1 vs. NCBI nr
Match: XP_022996725.1 (F-box protein SKIP14 [Cucurbita maxima])

HSP 1 Score: 793.9 bits (2049), Expect = 7.6e-226
Identity = 377/474 (79.54%), Postives = 412/474 (86.92%), Query Frame = 0


Query: 1   MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHG 60
           MALNFSRRP FPLH SED++VSPMRIANGYIVEGI ENN ESCGKSWH GREVD CFDH 
Sbjct: 1   MALNFSRRPIFPLHLSEDNIVSPMRIANGYIVEGIPENNVESCGKSWHRGREVDACFDHR 60

Query: 61  RDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVSDGGGAGEG 120
            D+C DSSQDPVSKDILD+LPADPFGMDISTTFTA+TGWLED+EVDYA CV + GG GE 
Sbjct: 61  NDICSDSSQDPVSKDILDILPADPFGMDISTTFTALTGWLEDMEVDYAECVRNRGGTGER 120

Query: 121 NIELFAGLNFFWNNALKFQAFPEIKGIGQNPDQICSYDECLNGKGTEGASCCCDFESICS 180
           N+ELFAGLNFFWNNALKFQAFPEIKGI Q PD +CS D  L+ K T   SC CDF SICS
Sbjct: 121 NVELFAGLNFFWNNALKFQAFPEIKGIVQKPDPMCSCDGFLDDKETGDLSCSCDFRSICS 180

Query: 181 MDGVSFANNDPPSFTGQQAAECQEQNCIYPEVDGGAPHAALNFVLYYLGVQDLLSVGRVC 240
           MD VSFA++DPPS  GQQAAE +EQ+CIY EVDGGAPHA L+F L YLGV+DLLSVGRVC
Sbjct: 181 MDEVSFADDDPPSCCGQQAAESEEQSCIYSEVDGGAPHAGLSFALCYLGVRDLLSVGRVC 240

Query: 241 RSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQGNLQCLSLLECPGITDDGLK 300
           +SLHS ++ DPL+WR+IHI+Q LNEKITDDILL L+NRA+GNLQCLSL+ECP ITD GLK
Sbjct: 241 KSLHSLIQGDPLLWRNIHIEQSLNEKITDDILLQLSNRARGNLQCLSLVECPRITDKGLK 300

Query: 301 RVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKHLRIGGLYGLTLEHFEELK 360
            VLESNPRLTKLSVP CTRLSIEGVVSSLRAFKL   QGVK LRIGGL+G+T EHFEELK
Sbjct: 301 HVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSIQGVKLLRIGGLFGVTQEHFEELK 360

Query: 361 FLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPIDIEKCPRCQNLRLVYDCPIEGCQGK 420
           FLLG+  S   QNSYKPHFYHRGNFYVSCDD+R IDIEKCPRCQNLRLVYDCP++GCQGK
Sbjct: 361 FLLGSGCSLKPQNSYKPHFYHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK 420

Query: 421 EHVTQACRACTLCILRCVQCGRCINENEYVETFCLELLCSDCWKP---CQEKRD 472
           E+  QACRACTLCI RC+QCGRCINENE+VETF LELLCS CWKP   CQE+RD
Sbjct: 421 EYAAQACRACTLCISRCIQCGRCINENEFVETFSLELLCSGCWKPSLECQEERD 474

[Close]

BLAST of MS000955.1 vs. NCBI nr
Match: XP_038884813.1 (F-box protein SKIP14 [Benincasa hispida])

HSP 1 Score: 789.6 bits (2038), Expect = 1.4e-224
Identity = 375/474 (79.11%), Postives = 403/474 (85.02%), Query Frame = 0


Query: 1   MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHG 60
           M LNFS RP FPLHFSED+LVSPMRIANGYIVEGI ENN E CG  WH GREV  CFDHG
Sbjct: 1   MTLNFSCRPFFPLHFSEDNLVSPMRIANGYIVEGIPENNAEGCGNPWHLGREVGACFDHG 60

Query: 61  RDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVSDGGGAGEG 120
           +D+C DSSQDPVSKDILD+LPADPFGMDIS+TFTAITGWLED+EVDYA CV D GGA E 
Sbjct: 61  KDICSDSSQDPVSKDILDILPADPFGMDISSTFTAITGWLEDMEVDYAECVRDRGGASET 120

Query: 121 NIELFAGLNFFWNNALKFQAFPEIKGIGQNPDQICSYDECLNGKGTEGASCCCDFESICS 180
           NIELFAGLNF WNN LKFQ FPEIK I Q P  + S D C +GK T   SCCCDF SICS
Sbjct: 121 NIELFAGLNFIWNNTLKFQKFPEIKSIDQKPYPMYSCDGCPDGKVTGDVSCCCDFGSICS 180

Query: 181 MDGVSFANNDPPSFTGQQAAECQEQNCIYPEVDGGAPHAALNFVLYYLGVQDLLSVGRVC 240
           MD    AN+DPPS   QQ  ECQEQNC Y E+DGG+PHAAL+F L YLGVQDLLSVGRVC
Sbjct: 181 MDEAFLANDDPPSCGEQQDIECQEQNCTYSEIDGGSPHAALSFALCYLGVQDLLSVGRVC 240

Query: 241 RSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQGNLQCLSLLECPGITDDGLK 300
           RSLHS V  DPL+WR+I IDQPLNEKITDDILL LTNRA+GNLQ LSL+ECP ITD+GLK
Sbjct: 241 RSLHSVVEGDPLLWRNIRIDQPLNEKITDDILLQLTNRARGNLQSLSLVECPRITDEGLK 300

Query: 301 RVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKHLRIGGLYGLTLEHFEELK 360
            VLESNPRLTKLSVP CTRLSIEGVVSSLRAFKL  TQGVKHLRIGGLYG+T EHFEELK
Sbjct: 301 HVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGVKHLRIGGLYGVTQEHFEELK 360

Query: 361 FLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPIDIEKCPRCQNLRLVYDCPIEGCQGK 420
            LLG++ +  QQNSYKPH YHRGNFYVSCDD+R IDIEKCPRCQNLRLVYDCP++GCQGK
Sbjct: 361 LLLGSDCNLTQQNSYKPHIYHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK 420

Query: 421 EHVTQACRACTLCILRCVQCGRCINENEYVETFCLELLCSDCWKP---CQEKRD 472
           EH TQAC+ CTLCI RC+QCGRCINE+EYVETFCLELLCSDCWKP   CQEK+D
Sbjct: 421 EHATQACKGCTLCIPRCIQCGRCINESEYVETFCLELLCSDCWKPLLKCQEKQD 474

[Close]

BLAST of MS000955.1 vs. ExPASy Swiss-Prot
Match: Q9LU91 (F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 6.3e-106
Identity = 227/494 (45.95%), Postives = 291/494 (58.91%), Query Frame = 0


Query: 1   MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHG 60
           MALNFS RP F  H SE+    PM IANG                +W         FD+G
Sbjct: 1   MALNFSHRP-FSSHLSEE----PMMIANG----------------NW------CSSFDNG 60

Query: 61  RDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVS----DGGG 120
           R    ++  D  S DILD+LP+DPFGMDI+ TFTAITGWLEDLE DY         D   
Sbjct: 61  R---KNTGGDASSVDILDVLPSDPFGMDINNTFTAITGWLEDLEDDYNNQYGRRRRDDIW 120

Query: 121 AGEGN-IELFAGLNFFWNNALKFQA------------------------FPEIKGIGQNP 180
            G+GN  +LFAGL+FFWNNA++FQ+                        FPE  G     
Sbjct: 121 IGDGNRQQLFAGLSFFWNNAMQFQSSGYSYGSESLFGGAFDGSLFSTCKFPESSGENN-- 180

Query: 181 DQICSYDECLNGKGTEGASCCCDFESICSMDGVSFANNDPPSFTGQQAAECQEQNCIYPE 240
                +   L+G G    SC   F S  S+D V    N   +  G+         C   E
Sbjct: 181 ----GFGGALDGDG----SCHGAFISASSVDEVLSHEN---ARNGEVVG--SSDRCNNGE 240

Query: 241 VDGGAPHAALNFVLYYLGVQDLLSVGRVCRSLHSAVREDPLIWRHIHIDQPLNEKITDDI 300
            D    H A+ F LY+L  +DLLSV  VC+SLH+ V +D L+W+HIHI +PLNEKIT++ 
Sbjct: 241 EDAYV-HPAIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEA 300

Query: 301 LLLLTNRAQGNLQCLSLLECPGITDDGLKRVLESNPRLTKLSVPRCTRLSIEGVVSSLRA 360
           LL LT RAQG +QCL +++C  ITDD LKRV+  N ++ K+ VP CTR++I+G++S LR 
Sbjct: 301 LLHLTERAQGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRD 360

Query: 361 FKLIGTQGVKHLRIGGLYGLTLEHFEELKFLLGTERSAMQQNSYKPHFYHRGNFYVSCDD 420
            K  G   VKHL++ GL+G+T +H++EL  LL  + + ++Q   KP FYHRG   VSCDD
Sbjct: 361 LKSAGKLQVKHLQLRGLFGVTKDHYDELIDLLNID-NKVKQTIQKPRFYHRGEACVSCDD 420

Query: 421 DRPIDIEKCPRCQNLRLVYDCPIEGCQGKEHVTQACRACTLCILRCVQCGRCINENEYVE 466
           DR +DIE CP+CQN +LVYDCP E C+GK+  ++ CRAC+LCI RC  CGRCI + EY E
Sbjct: 421 DRALDIEMCPKCQNFKLVYDCPAEDCKGKKKGSEECRACSLCIQRCYHCGRCIIDTEYEE 447

[Close]

BLAST of MS000955.1 vs. ExPASy Swiss-Prot
Match: Q9LK24 (F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-49
Identity = 112/254 (44.09%), Postives = 150/254 (59.06%), Query Frame = 0


Query: 214 GGAPHAALNFVLYYLGVQDLLSVGRVCRSLHSAVREDPLIWRHIHI-DQPLNEKITDDIL 273
           GG  H A   VL YL ++++L+V  VCRSL  +V ++P  W  I + D  L  ++TD+ L
Sbjct: 124 GGEAHDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESL 183

Query: 274 LLLTNRAQGNLQCLSLLECPGITDDGLKRVLESNPRLTKLSVPRCTRLSIEGVVSSLRAF 333
           L LT RA G ++CL+L  C GITD GLK+VL SNP LTKLSV  C RLS  G+VS+LR  
Sbjct: 184 LKLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDL 243

Query: 334 KLIGTQGVKHLRIGGLYGLTLEHFEELKFLLGTE-RSAMQQNSYKPHFYHRGNFYVSCDD 393
           K     GVK L  GG    T E F+EL  LLG + +  +Q+   + +   R  FY+  +D
Sbjct: 244 KSSNRLGVKSLITGGALYFTKEQFKELNLLLGGDAKVGLQERKKRFYTSCRSEFYL--ED 303

Query: 394 DRPIDIEKCPRCQNLRLVYDCPIEGCQGK---EHVTQACRACTLCILRCVQCGRCINENE 453
           DR  D+E CP C+   LV+DCP + C  K    +   +CRAC +CI RC +CG C+N+ E
Sbjct: 304 DRVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSCLNDCE 363

Query: 454 YVETFCLELLCSDC 463
             + FC    C  C
Sbjct: 364 N-KPFCFAFSCVVC 374

[Close]

BLAST of MS000955.1 vs. ExPASy Swiss-Prot
Match: Q9ZU90 (F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.4e-33
Identity = 82/251 (32.67%), Postives = 134/251 (53.39%), Query Frame = 0


Query: 218 HAALNFVLYYL-GVQDLLSVGRVCRSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLT 277
           H  L  VL YL  + +LLS+ RV RSL  A+R++  +W  + I+ PL+ ++TDDIL   +
Sbjct: 17  HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFS 76

Query: 278 NRAQGNLQCLSLLECPGITDDGLKRVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIG 337
           +++ G L+ L L +C  +T+ GL+RV+++NP +TK+ VP C+ L+ EG++  + +     
Sbjct: 77  SKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVESLSK-N 136

Query: 338 TQGVKHLRIGGLYGLTLEHFEELKFLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPID 397
              ++ L I G+ G T +H   L   L +E +                          ID
Sbjct: 137 NHKLETLHINGVNGFTKQHLSALYTYLSSEGT--------------------------ID 196

Query: 398 IEKCPRCQNLRLVYDCPIEGCQGKEHVTQACRACTLCILRCVQCGRCI--NENEYVETFC 457
           +E CP+C  +R++  C  E C  K+   + CR C LCI RC +C  C+  ++ E  E  C
Sbjct: 197 LEVCPKCDEVRMIPSCSRESCNQKQ---RKCRGCWLCIPRCAECAVCLVGSDTESQEAAC 237

Query: 458 --LELLCSDCW 464
              ++LC +CW
Sbjct: 257 GNDDVLCLECW 237

[Close]

BLAST of MS000955.1 vs. ExPASy Swiss-Prot
Match: Q9SKK0 (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 6.9e-04
Identity = 34/110 (30.91%), Postives = 54/110 (49.09%), Query Frame = 0


Query: 233 LLSVGRVCRSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQGNLQCLSLLECP 292
           L S+GR C SL S       +W            ITD+ LL +       L+ L L  C 
Sbjct: 169 LRSIGRSCPSLGSL-----SLWN--------VSTITDNGLLEIAEGC-AQLEKLELNRCS 228

Query: 293 GITDDGLKRVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKH 343
            ITD GL  + +S P LT+L++  C+R+  EG+++  R+   + +  +K+
Sbjct: 229 TITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIKN 264

[Close]

BLAST of MS000955.1 vs. ExPASy TrEMBL
Match: A0A6J1BQG6 (F-box protein SKIP14-like OS=Momordica charantia OX=3673 GN=LOC111004693 PE=4 SV=1)

HSP 1 Score: 996.9 bits (2576), Expect = 2.9e-287
Identity = 468/471 (99.36%), Postives = 469/471 (99.58%), Query Frame = 0


Query: 1   MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHG 60
           MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHG
Sbjct: 1   MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHG 60

Query: 61  RDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVSDGGGAGEG 120
           RDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVSDGG AGEG
Sbjct: 61  RDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVSDGGDAGEG 120

Query: 121 NIELFAGLNFFWNNALKFQAFPEIKGIGQNPDQICSYDECLNGKGTEGASCCCDFESICS 180
           NIELFAGLNFFWNNALKFQAFPEIKGIGQNPDQICSYD CLNGKGTEGASCCCDFESICS
Sbjct: 121 NIELFAGLNFFWNNALKFQAFPEIKGIGQNPDQICSYDGCLNGKGTEGASCCCDFESICS 180

Query: 181 MDGVSFANNDPPSFTGQQAAECQEQNCIYPEVDGGAPHAALNFVLYYLGVQDLLSVGRVC 240
           MDGVSFANNDPPSFTGQQAAECQEQNCIYPEVDGGAPHAALNFVLYYLGVQDLLSVGRVC
Sbjct: 181 MDGVSFANNDPPSFTGQQAAECQEQNCIYPEVDGGAPHAALNFVLYYLGVQDLLSVGRVC 240

Query: 241 RSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQGNLQCLSLLECPGITDDGLK 300
           RSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQG+LQCLSLLECPGITDDGLK
Sbjct: 241 RSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQGSLQCLSLLECPGITDDGLK 300

Query: 301 RVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKHLRIGGLYGLTLEHFEELK 360
           RVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKHLRIGGLYGLTLEHFEELK
Sbjct: 301 RVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKHLRIGGLYGLTLEHFEELK 360

Query: 361 FLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPIDIEKCPRCQNLRLVYDCPIEGCQGK 420
           FLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPIDIEKCPRCQNLRLVYDCPIEGCQGK
Sbjct: 361 FLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPIDIEKCPRCQNLRLVYDCPIEGCQGK 420

Query: 421 EHVTQACRACTLCILRCVQCGRCINENEYVETFCLELLCSDCWKPCQEKRD 472
           EHVTQACRACTLCILRCVQCGRCINENEYVETFCLELLCSDCWKPCQEKRD
Sbjct: 421 EHVTQACRACTLCILRCVQCGRCINENEYVETFCLELLCSDCWKPCQEKRD 471

[Close]

BLAST of MS000955.1 vs. ExPASy TrEMBL
Match: A0A6J1HDM9 (F-box protein SKIP14 OS=Cucurbita moschata OX=3662 GN=LOC111462561 PE=4 SV=1)

HSP 1 Score: 802.4 bits (2071), Expect = 1.0e-228
Identity = 380/474 (80.17%), Postives = 415/474 (87.55%), Query Frame = 0


Query: 1   MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHG 60
           MALNFSRRP FPLH SED++VSPMRIANGYIVEGI ENN ESCGKSWH GREVD CFDH 
Sbjct: 1   MALNFSRRPIFPLHLSEDNIVSPMRIANGYIVEGIPENNVESCGKSWHRGREVDACFDHR 60

Query: 61  RDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVSDGGGAGEG 120
            D+C DSSQDPVSKDILD+LPADPFGMDISTTFTA+TGWLED+EVDYA CV DGGG GE 
Sbjct: 61  NDICSDSSQDPVSKDILDILPADPFGMDISTTFTALTGWLEDMEVDYAECVRDGGGTGER 120

Query: 121 NIELFAGLNFFWNNALKFQAFPEIKGIGQNPDQICSYDECLNGKGTEGASCCCDFESICS 180
           N+ELFAGLNFFWNNALKFQAFPEIKGI Q PD +CS D  L+ K T   SC CDF SICS
Sbjct: 121 NVELFAGLNFFWNNALKFQAFPEIKGIVQKPDPMCSCDGFLDEKETGDVSCSCDFRSICS 180

Query: 181 MDGVSFANNDPPSFTGQQAAECQEQNCIYPEVDGGAPHAALNFVLYYLGVQDLLSVGRVC 240
           MD VSFA++DPPS  GQQAAE +EQ+CIY EVDGGAPHA L+F L YLGV+DLLSVGRVC
Sbjct: 181 MDEVSFADDDPPSCCGQQAAESEEQSCIYSEVDGGAPHAGLSFALCYLGVRDLLSVGRVC 240

Query: 241 RSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQGNLQCLSLLECPGITDDGLK 300
            SLHS V+ DPL+WR+IHI+QPLNEKITDDILL L+NRA+GNLQCLSL+ECP ITD+GLK
Sbjct: 241 NSLHSVVQGDPLLWRNIHIEQPLNEKITDDILLQLSNRARGNLQCLSLVECPRITDEGLK 300

Query: 301 RVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKHLRIGGLYGLTLEHFEELK 360
           +VLESNPRLTKLSVP CTRLSIEGVVSSLRAFKL   QGVK LRIGGL+G+T EHFEELK
Sbjct: 301 QVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSIQGVKLLRIGGLFGVTQEHFEELK 360

Query: 361 FLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPIDIEKCPRCQNLRLVYDCPIEGCQGK 420
           FLLG+  S   QNSYKPHFYHRGNFY+SCDD+R IDIEKCPRCQNLRLVYDCP++GCQGK
Sbjct: 361 FLLGSGCSLKPQNSYKPHFYHRGNFYLSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK 420

Query: 421 EHVTQACRACTLCILRCVQCGRCINENEYVETFCLELLCSDCWKP---CQEKRD 472
           E+  QACRACTLCI RC+QCGRCINENE+VETF LELLCS CWKP   CQE+RD
Sbjct: 421 EYAAQACRACTLCISRCIQCGRCINENEFVETFSLELLCSGCWKPSLECQEERD 474

[Close]

BLAST of MS000955.1 vs. ExPASy TrEMBL
Match: A0A6J1K7K7 (F-box protein SKIP14 OS=Cucurbita maxima OX=3661 GN=LOC111491883 PE=4 SV=1)

HSP 1 Score: 793.9 bits (2049), Expect = 3.7e-226
Identity = 377/474 (79.54%), Postives = 412/474 (86.92%), Query Frame = 0


Query: 1   MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHG 60
           MALNFSRRP FPLH SED++VSPMRIANGYIVEGI ENN ESCGKSWH GREVD CFDH 
Sbjct: 1   MALNFSRRPIFPLHLSEDNIVSPMRIANGYIVEGIPENNVESCGKSWHRGREVDACFDHR 60

Query: 61  RDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVSDGGGAGEG 120
            D+C DSSQDPVSKDILD+LPADPFGMDISTTFTA+TGWLED+EVDYA CV + GG GE 
Sbjct: 61  NDICSDSSQDPVSKDILDILPADPFGMDISTTFTALTGWLEDMEVDYAECVRNRGGTGER 120

Query: 121 NIELFAGLNFFWNNALKFQAFPEIKGIGQNPDQICSYDECLNGKGTEGASCCCDFESICS 180
           N+ELFAGLNFFWNNALKFQAFPEIKGI Q PD +CS D  L+ K T   SC CDF SICS
Sbjct: 121 NVELFAGLNFFWNNALKFQAFPEIKGIVQKPDPMCSCDGFLDDKETGDLSCSCDFRSICS 180

Query: 181 MDGVSFANNDPPSFTGQQAAECQEQNCIYPEVDGGAPHAALNFVLYYLGVQDLLSVGRVC 240
           MD VSFA++DPPS  GQQAAE +EQ+CIY EVDGGAPHA L+F L YLGV+DLLSVGRVC
Sbjct: 181 MDEVSFADDDPPSCCGQQAAESEEQSCIYSEVDGGAPHAGLSFALCYLGVRDLLSVGRVC 240

Query: 241 RSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQGNLQCLSLLECPGITDDGLK 300
           +SLHS ++ DPL+WR+IHI+Q LNEKITDDILL L+NRA+GNLQCLSL+ECP ITD GLK
Sbjct: 241 KSLHSLIQGDPLLWRNIHIEQSLNEKITDDILLQLSNRARGNLQCLSLVECPRITDKGLK 300

Query: 301 RVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKHLRIGGLYGLTLEHFEELK 360
            VLESNPRLTKLSVP CTRLSIEGVVSSLRAFKL   QGVK LRIGGL+G+T EHFEELK
Sbjct: 301 HVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSIQGVKLLRIGGLFGVTQEHFEELK 360

Query: 361 FLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPIDIEKCPRCQNLRLVYDCPIEGCQGK 420
           FLLG+  S   QNSYKPHFYHRGNFYVSCDD+R IDIEKCPRCQNLRLVYDCP++GCQGK
Sbjct: 361 FLLGSGCSLKPQNSYKPHFYHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK 420

Query: 421 EHVTQACRACTLCILRCVQCGRCINENEYVETFCLELLCSDCWKP---CQEKRD 472
           E+  QACRACTLCI RC+QCGRCINENE+VETF LELLCS CWKP   CQE+RD
Sbjct: 421 EYAAQACRACTLCISRCIQCGRCINENEFVETFSLELLCSGCWKPSLECQEERD 474

[Close]

BLAST of MS000955.1 vs. ExPASy TrEMBL
Match: A0A6J1GGY1 (F-box protein SKIP14-like OS=Cucurbita moschata OX=3662 GN=LOC111454091 PE=4 SV=1)

HSP 1 Score: 781.6 bits (2017), Expect = 1.9e-222
Identity = 368/474 (77.64%), Postives = 409/474 (86.29%), Query Frame = 0


Query: 1   MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHG 60
           MALNFS RP FPLH SED+LVSPMRIANGYIV+GIHENN ESCGK WH GREVD CFD G
Sbjct: 1   MALNFSCRPIFPLHHSEDNLVSPMRIANGYIVDGIHENNAESCGKLWHLGREVDACFDRG 60

Query: 61  RDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVSDGGGAGEG 120
           +D+C DSSQ P ++DILD+LPADPFGMDISTTFTAITGWLED+EVDYA CVSD GGAGEG
Sbjct: 61  KDICSDSSQGPGTEDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAECVSDRGGAGEG 120

Query: 121 NIELFAGLNFFWNNALKFQAFPEIKGIGQNPDQICSYDECLNGKGTEGASCCCDFESICS 180
           N ELFAGLNF WNNALKFQAFPEIK I Q P+ +CS D CL+GK T   +CCCDF SICS
Sbjct: 121 NAELFAGLNFIWNNALKFQAFPEIKRIVQKPNPMCSCDGCLDGKETGDVTCCCDFGSICS 180

Query: 181 MDGVSFANNDPPSFTGQQAAECQEQNCIYPEVDGGAPHAALNFVLYYLGVQDLLSVGRVC 240
           +  VS AN+DPP++  QQ AECQ+QNCIY EVDGGAPH  L+F LYYLG+QDL S+GRVC
Sbjct: 181 VTEVSSANDDPPTYCEQQVAECQDQNCIYWEVDGGAPHEGLSFALYYLGIQDLCSIGRVC 240

Query: 241 RSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQGNLQCLSLLECPGITDDGLK 300
           RSLHS V+ DPL+W +IHIDQPLNEKI++DILL LTNRA GNLQCLSL+ECP ITD+GLK
Sbjct: 241 RSLHSVVQGDPLLWTNIHIDQPLNEKISNDILLQLTNRALGNLQCLSLVECPRITDEGLK 300

Query: 301 RVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKHLRIGGLYGLTLEHFEELK 360
            VLESNPRLTKLSVP CTRLSIEGV+SSLRAFKL  T GVK LRIGGLYG+T EHF+ELK
Sbjct: 301 CVLESNPRLTKLSVPGCTRLSIEGVISSLRAFKLTSTHGVKRLRIGGLYGVTQEHFKELK 360

Query: 361 FLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPIDIEKCPRCQNLRLVYDCPIEGCQGK 420
           FLLG++ + MQ++SYKPHFYHRGNFYVSCDD+R IDIE CPRC+N RLVYDCP +GCQG 
Sbjct: 361 FLLGSDCNLMQESSYKPHFYHRGNFYVSCDDERAIDIEICPRCENPRLVYDCPADGCQGS 420

Query: 421 EHVTQACRACTLCILRCVQCGRCINENEYVETFCLELLCSDCWKP---CQEKRD 472
              TQACRACTLCI RCVQCGRC+NENEYVETF LELLCSDCWKP   C+EK+D
Sbjct: 421 GLATQACRACTLCIPRCVQCGRCVNENEYVETFTLELLCSDCWKPLLKCREKQD 474

[Close]

BLAST of MS000955.1 vs. ExPASy TrEMBL
Match: A0A6J1KI68 (F-box protein SKIP14-like OS=Cucurbita maxima OX=3661 GN=LOC111496006 PE=4 SV=1)

HSP 1 Score: 776.5 bits (2004), Expect = 6.1e-221
Identity = 368/474 (77.64%), Postives = 409/474 (86.29%), Query Frame = 0


Query: 1   MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHG 60
           MALNFS RP FPLH SED+LVSPMRIANGYIV+GIHENN ESCG+ +H GREVD CFD G
Sbjct: 1   MALNFSCRPIFPLHHSEDNLVSPMRIANGYIVDGIHENNAESCGRLFHLGREVDACFDRG 60

Query: 61  RDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVSDGGGAGEG 120
           +D+C DSSQ P ++DILD+LPADPFGMDISTTFTAITGWL+D+EVDYA CVSD GGAGEG
Sbjct: 61  KDICSDSSQGPGTEDILDVLPADPFGMDISTTFTAITGWLKDMEVDYAECVSDRGGAGEG 120

Query: 121 NIELFAGLNFFWNNALKFQAFPEIKGIGQNPDQICSYDECLNGKGTEGASCCCDFESICS 180
           N ELFAGLNF WNNALKFQAFPEIK I Q P+ +CS D CL+GK T   +CCCDF SICS
Sbjct: 121 NAELFAGLNFIWNNALKFQAFPEIKRIVQKPNPMCSCDGCLDGKETGDVTCCCDFGSICS 180

Query: 181 MDGVSFANNDPPSFTGQQAAECQEQNCIYPEVDGGAPHAALNFVLYYLGVQDLLSVGRVC 240
           +  VS AN+DPPS+  QQ AECQEQNCIY EVDGGAPH  L+F LYYLGVQDL S+GRVC
Sbjct: 181 VTEVSSANDDPPSYCEQQVAECQEQNCIYWEVDGGAPHEGLSFALYYLGVQDLCSIGRVC 240

Query: 241 RSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQGNLQCLSLLECPGITDDGLK 300
           RSLHS V+ DPL+W +IHIDQPLNEKI++DILL LTNRA GNLQCLSL+ECP ITD+GLK
Sbjct: 241 RSLHSVVQGDPLLWTNIHIDQPLNEKISNDILLQLTNRALGNLQCLSLVECPRITDEGLK 300

Query: 301 RVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKHLRIGGLYGLTLEHFEELK 360
            VLESNPRLTKLSVP CTRLSIEGV+SSLRAFKL  TQGVK LRIGGLYG+T EHF+ELK
Sbjct: 301 CVLESNPRLTKLSVPGCTRLSIEGVISSLRAFKLTSTQGVKRLRIGGLYGVTQEHFKELK 360

Query: 361 FLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPIDIEKCPRCQNLRLVYDCPIEGCQGK 420
           FLLG++ + MQ++SYKPHFYHRGNFYVSCDD+R IDIE CPRC+N RLVYDCP +GC G 
Sbjct: 361 FLLGSDCNLMQESSYKPHFYHRGNFYVSCDDERAIDIEICPRCENPRLVYDCPADGCPGG 420

Query: 421 EHVTQACRACTLCILRCVQCGRCINENEYVETFCLELLCSDCWKP---CQEKRD 472
              TQACRACTLCI RCVQCGRC+NENEYVETF LELLCSDCWKP   C+EK+D
Sbjct: 421 GLATQACRACTLCIPRCVQCGRCVNENEYVETFTLELLCSDCWKPLLKCREKQD 474

[Close]

BLAST of MS000955.1 vs. TAIR 10
Match: AT3G26000.1 (Ribonuclease inhibitor )

HSP 1 Score: 386.0 bits (990), Expect = 4.5e-107
Identity = 227/494 (45.95%), Postives = 291/494 (58.91%), Query Frame = 0


Query: 1   MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGREVDDCFDHG 60
           MALNFS RP F  H SE+    PM IANG                +W         FD+G
Sbjct: 1   MALNFSHRP-FSSHLSEE----PMMIANG----------------NW------CSSFDNG 60

Query: 61  RDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGCVS----DGGG 120
           R    ++  D  S DILD+LP+DPFGMDI+ TFTAITGWLEDLE DY         D   
Sbjct: 61  R---KNTGGDASSVDILDVLPSDPFGMDINNTFTAITGWLEDLEDDYNNQYGRRRRDDIW 120

Query: 121 AGEGN-IELFAGLNFFWNNALKFQA------------------------FPEIKGIGQNP 180
            G+GN  +LFAGL+FFWNNA++FQ+                        FPE  G     
Sbjct: 121 IGDGNRQQLFAGLSFFWNNAMQFQSSGYSYGSESLFGGAFDGSLFSTCKFPESSGENN-- 180

Query: 181 DQICSYDECLNGKGTEGASCCCDFESICSMDGVSFANNDPPSFTGQQAAECQEQNCIYPE 240
                +   L+G G    SC   F S  S+D V    N   +  G+         C   E
Sbjct: 181 ----GFGGALDGDG----SCHGAFISASSVDEVLSHEN---ARNGEVVG--SSDRCNNGE 240

Query: 241 VDGGAPHAALNFVLYYLGVQDLLSVGRVCRSLHSAVREDPLIWRHIHIDQPLNEKITDDI 300
            D    H A+ F LY+L  +DLLSV  VC+SLH+ V +D L+W+HIHI +PLNEKIT++ 
Sbjct: 241 EDAYV-HPAIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEA 300

Query: 301 LLLLTNRAQGNLQCLSLLECPGITDDGLKRVLESNPRLTKLSVPRCTRLSIEGVVSSLRA 360
           LL LT RAQG +QCL +++C  ITDD LKRV+  N ++ K+ VP CTR++I+G++S LR 
Sbjct: 301 LLHLTERAQGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRD 360

Query: 361 FKLIGTQGVKHLRIGGLYGLTLEHFEELKFLLGTERSAMQQNSYKPHFYHRGNFYVSCDD 420
            K  G   VKHL++ GL+G+T +H++EL  LL  + + ++Q   KP FYHRG   VSCDD
Sbjct: 361 LKSAGKLQVKHLQLRGLFGVTKDHYDELIDLLNID-NKVKQTIQKPRFYHRGEACVSCDD 420

Query: 421 DRPIDIEKCPRCQNLRLVYDCPIEGCQGKEHVTQACRACTLCILRCVQCGRCINENEYVE 466
           DR +DIE CP+CQN +LVYDCP E C+GK+  ++ CRAC+LCI RC  CGRCI + EY E
Sbjct: 421 DRALDIEMCPKCQNFKLVYDCPAEDCKGKKKGSEECRACSLCIQRCYHCGRCIIDTEYEE 447

[Close]

BLAST of MS000955.1 vs. TAIR 10
Match: AT3G27290.1 (RNI-like superfamily protein )

HSP 1 Score: 198.7 bits (504), Expect = 1.0e-50
Identity = 112/254 (44.09%), Postives = 150/254 (59.06%), Query Frame = 0


Query: 214 GGAPHAALNFVLYYLGVQDLLSVGRVCRSLHSAVREDPLIWRHIHI-DQPLNEKITDDIL 273
           GG  H A   VL YL ++++L+V  VCRSL  +V ++P  W  I + D  L  ++TD+ L
Sbjct: 124 GGEAHDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESL 183

Query: 274 LLLTNRAQGNLQCLSLLECPGITDDGLKRVLESNPRLTKLSVPRCTRLSIEGVVSSLRAF 333
           L LT RA G ++CL+L  C GITD GLK+VL SNP LTKLSV  C RLS  G+VS+LR  
Sbjct: 184 LKLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDL 243

Query: 334 KLIGTQGVKHLRIGGLYGLTLEHFEELKFLLGTE-RSAMQQNSYKPHFYHRGNFYVSCDD 393
           K     GVK L  GG    T E F+EL  LLG + +  +Q+   + +   R  FY+  +D
Sbjct: 244 KSSNRLGVKSLITGGALYFTKEQFKELNLLLGGDAKVGLQERKKRFYTSCRSEFYL--ED 303

Query: 394 DRPIDIEKCPRCQNLRLVYDCPIEGCQGK---EHVTQACRACTLCILRCVQCGRCINENE 453
           DR  D+E CP C+   LV+DCP + C  K    +   +CRAC +CI RC +CG C+N+ E
Sbjct: 304 DRVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSCLNDCE 363

Query: 454 YVETFCLELLCSDC 463
             + FC    C  C
Sbjct: 364 N-KPFCFAFSCVVC 374

[Close]

BLAST of MS000955.1 vs. TAIR 10
Match: AT2G01620.1 (RNI-like superfamily protein )

HSP 1 Score: 144.8 bits (364), Expect = 1.7e-34
Identity = 82/251 (32.67%), Postives = 134/251 (53.39%), Query Frame = 0


Query: 218 HAALNFVLYYL-GVQDLLSVGRVCRSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLT 277
           H  L  VL YL  + +LLS+ RV RSL  A+R++  +W  + I+ PL+ ++TDDIL   +
Sbjct: 17  HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFS 76

Query: 278 NRAQGNLQCLSLLECPGITDDGLKRVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIG 337
           +++ G L+ L L +C  +T+ GL+RV+++NP +TK+ VP C+ L+ EG++  + +     
Sbjct: 77  SKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVESLSK-N 136

Query: 338 TQGVKHLRIGGLYGLTLEHFEELKFLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPID 397
              ++ L I G+ G T +H   L   L +E +                          ID
Sbjct: 137 NHKLETLHINGVNGFTKQHLSALYTYLSSEGT--------------------------ID 196

Query: 398 IEKCPRCQNLRLVYDCPIEGCQGKEHVTQACRACTLCILRCVQCGRCI--NENEYVETFC 457
           +E CP+C  +R++  C  E C  K+   + CR C LCI RC +C  C+  ++ E  E  C
Sbjct: 197 LEVCPKCDEVRMIPSCSRESCNQKQ---RKCRGCWLCIPRCAECAVCLVGSDTESQEAAC 237

Query: 458 --LELLCSDCW 464
              ++LC +CW
Sbjct: 257 GNDDVLCLECW 237

[Close]

BLAST of MS000955.1 vs. TAIR 10
Match: AT2G25490.1 (EIN3-binding F box protein 1 )

HSP 1 Score: 47.0 bits (110), Expect = 4.9e-05
Identity = 34/110 (30.91%), Postives = 54/110 (49.09%), Query Frame = 0


Query: 233 LLSVGRVCRSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQGNLQCLSLLECP 292
           L S+GR C SL S       +W            ITD+ LL +       L+ L L  C 
Sbjct: 169 LRSIGRSCPSLGSL-----SLWN--------VSTITDNGLLEIAEGC-AQLEKLELNRCS 228

Query: 293 GITDDGLKRVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKH 343
            ITD GL  + +S P LT+L++  C+R+  EG+++  R+   + +  +K+
Sbjct: 229 TITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIKN 264

[Close]

BLAST of MS000955.1 vs. TAIR 10
Match: AT5G27920.1 (F-box family protein )

HSP 1 Score: 44.7 bits (104), Expect = 2.4e-04
Identity = 29/97 (29.90%), Postives = 51/97 (52.58%), Query Frame = 0


Query: 266 KITDDILLLLTNRAQGNLQCLSLLECPGITDDGLKRVLESNPRLTKLSVPRCTRLSIEGV 325
           KIT+D +  +    +  L+ L ++ CP I D GL+ +   +P L ++ V RC R+S+ G+
Sbjct: 209 KITNDSIRSIALLVK--LEVLDMVSCPLIDDGGLQFLENGSPSLQEVDVTRCDRVSLSGL 268

Query: 326 VSSLRAFKLIGTQGVKHLRIGGLYGLTLEHFEELKFL 363
           +S +R    I      H  +  + G  L++ + LK L
Sbjct: 269 ISIVRGHPDIQLLKASHC-VSEVSGSFLKYIKGLKHL 302

The following BLAST results are available for this feature:

BLAST of MS000955.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131519.1	5.9e-287	99.36	F-box protein SKIP14-like [Momordica charantia]	[more]
XP_022961940.1	2.1e-228	80.17	F-box protein SKIP14 [Cucurbita moschata]	[more]
XP_023546191.1	9.0e-227	79.75	F-box protein SKIP14 [Cucurbita pepo subsp. pepo]	[more]
XP_022996725.1	7.6e-226	79.54	F-box protein SKIP14 [Cucurbita maxima]	[more]
XP_038884813.1	1.4e-224	79.11	F-box protein SKIP14 [Benincasa hispida]	[more]

BLAST of MS000955.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU91	6.3e-106	45.95	F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1	[more]
Q9LK24	1.4e-49	44.09	F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1	[more]
Q9ZU90	2.4e-33	32.67	F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1	[more]
Q9SKK0	6.9e-04	30.91	EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1	[more]

BLAST of MS000955.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BQG6	2.9e-287	99.36	F-box protein SKIP14-like OS=Momordica charantia OX=3673 GN=LOC111004693 PE=4 SV...	[more]
A0A6J1HDM9	1.0e-228	80.17	F-box protein SKIP14 OS=Cucurbita moschata OX=3662 GN=LOC111462561 PE=4 SV=1	[more]
A0A6J1K7K7	3.7e-226	79.54	F-box protein SKIP14 OS=Cucurbita maxima OX=3661 GN=LOC111491883 PE=4 SV=1	[more]
A0A6J1GGY1	1.9e-222	77.64	F-box protein SKIP14-like OS=Cucurbita moschata OX=3662 GN=LOC111454091 PE=4 SV=...	[more]
A0A6J1KI68	6.1e-221	77.64	F-box protein SKIP14-like OS=Cucurbita maxima OX=3661 GN=LOC111496006 PE=4 SV=1	[more]

BLAST of MS000955.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26000.1	4.5e-107	45.95	Ribonuclease inhibitor	[more]
AT3G27290.1	1.0e-50	44.09	RNI-like superfamily protein	[more]
AT2G01620.1	1.7e-34	32.67	RNI-like superfamily protein	[more]
AT2G25490.1	4.9e-05	30.91	EIN3-binding F box protein 1	[more]
AT5G27920.1	2.4e-04	29.90	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 224..259 e-value: 1.9E-6 score: 27.7
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 210..257 score: 9.179537
None	No IPR available	GENE3D	1.20.1280.50		coord: 217..257 e-value: 5.0E-5 score: 25.1
None	No IPR available	PANTHER	PTHR13382:SF22	F-BOX PROTEIN SKIP14	coord: 1..466
None	No IPR available	PANTHER	PTHR13382	MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B	coord: 1..466
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 265..416
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 263..363 e-value: 1.2E-9 score: 39.6
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 217..260

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS000955	MS000955	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS000955.1-cds	MS000955.1-cds-scaffold36:454927..455859	CDS
MS000955.1-cds	MS000955.1-cds-scaffold36:456825..457304	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS000955.1	MS000955.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding