MELO3C035618.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C035618.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Retrotransposon protein
Location	chr06: 32756871 .. 32757779 (+)
Sequence length	824
RNA-Seq Expression	MELO3C035618.1
Synteny	MELO3C035618.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAACCATCGATAGTCGAATGATGGCGTTCAAGATCCCAGGTTCTAATATCCATGCTTCAACCATCGATAGTCGAATCAAATTGATGAAGAGAATGTTTCACGCACTTGCGGAGATGCGTGGCCCAAACTGTAGTGGTTTTGGGTGGAATGATGAAAAAAAATGCATCGTCGCTGAGAAAGAAGTCTTTGACGATTGGGTAAAGGTGCGTTACTAGATATTTGAACACTTGTTTGATTATTTGAATACATGGACTAATAATTTATTATTGCACTTATACAAAGTCATCCGGCGGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGTCGGGCTGAGAGTTTTGCGGACATTGGGTCAAACGATCCTCCTGGGTATGACGCATTTGCTGCTGATGCTATGCCAGATACGGACTTTCCGCCAATGTACAGTCCGGGATTGAACATGTCGCCTGATGATTTGATGGAAACAAGAACCGCTAGGGTCAGTGAACGTAGAAATGTTTCAAGCGGGTCTAAGCGGAAACGTCCAGGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTATGGAAATGAACAACTTCATCGCATTGCTGAATGGCCTATCCTACAACGTCAAGATGCTACCCAAACACGTCAAGAGATTGTTCGACATTTGGAGGCCATCCCTGAGCTCACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTATCGTCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACCATATGAAGTACCCGTACTGCAGCCTCATTCTTCAAGAAAACCAATGACTAGTTAGTTTGTTTTATTTGTATTAATGAAACTTTTCTTACTTGGAC

mRNA sequence

TTAAACCATCGATAGTCGAATGATGGCGTTCAAGATCCCAGGTTCTAATATCCATGCTTCAACCATCGATAGTCGAATCAAATTGATGAAGAGAATGTTTCACGCACTTGCGGAGATGCGTGGCCCAAACTGTAGTGGTTTTGGGTGGAATGATGAAAAAAAATGCATCGTCGCTGAGAAAGAAGTCTTTGACGATTGGTCATCCGGCGGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGTCGGGCTGAGAGTTTTGCGGACATTGGGTCAAACGATCCTCCTGGGTATGACGCATTTGCTGCTGATGCTATGCCAGATACGGACTTTCCGCCAATGTACAGTCCGGGATTGAACATGTCGCCTGATGATTTGATGGAAACAAGAACCGCTAGGGTCAGTGAACGTAGAAATGTTTCAAGCGGGTCTAAGCGGAAACGTCCAGGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTATGGAAATGAACAACTTCATCGCATTGCTGAATGGCCTATCCTACAACGTCAAGATGCTACCCAAACACGTCAAGAGATTGTTCGACATTTGGAGGCCATCCCTGAGCTCACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTATCGTCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACCATATGAAGTACCCGTACTGCAGCCTCATTCTTCAAGAAAACCAATGACTAGTTAGTTTGTTTTATTTGTATTAATGAAACTTTTCTTACTTGGAC

Coding sequence (CDS)

ATGATGAAAAAAAATGCATCGTCGCTGAGAAAGAAGTCTTTGACGATTGGTCATCCGGCGGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGTCGGGCTGAGAGTTTTGCGGACATTGGGTCAAACGATCCTCCTGGGTATGACGCATTTGCTGCTGATGCTATGCCAGATACGGACTTTCCGCCAATGTACAGTCCGGGATTGAACATGTCGCCTGATGATTTGATGGAAACAAGAACCGCTAGGGTCAGTGAACGTAGAAATGTTTCAAGCGGGTCTAAGCGGAAACGTCCAGGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTATGGAAATGAACAACTTCATCGCATTGCTGAATGGCCTATCCTACAACGTCAAGATGCTACCCAAACACGTCAAGAGATTGTTCGACATTTGGAGGCCATCCCTGAGCTCACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTATCGTCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACCATATGAAGTACCCGTACTGCAGCCTCATTCTTCAAGAAAACCAATGA

Protein sequence

MMKKNASSLRKKSLTIGHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRIVDDMKAFLEVPDHMKYPYCSLILQENQ

Homology

[Close]

BLAST of MELO3C035618.1 vs. NCBI nr
Match: KAA0046928.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 401.0 bits (1029), Expect = 6.4e-108
Identity = 200/206 (97.09%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 3   KKNASSLRKKSLTIGHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPG 62
           +KNASSLRKKSLTIGHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAE FADIGSNDPPG
Sbjct: 69  EKNASSLRKKSLTIGHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAEIFADIGSNDPPG 128

Query: 63  YDAFAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGD 122
           +DAFAADAMPDTDFPP YSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGD
Sbjct: 129 FDAFAADAMPDTDFPPTYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGD 188

Query: 123 IVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRIV 182
           IVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMR V
Sbjct: 189 IVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNV 248

Query: 183 DDMKAFLEVPDHMKYPYCSLILQENQ 209
           DDMKAFLEVPDHMKYPYC+LILQENQ
Sbjct: 249 DDMKAFLEVPDHMKYPYCTLILQENQ 274

[Close]

BLAST of MELO3C035618.1 vs. NCBI nr
Match: KAA0035621.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0041647.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0046728.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0052099.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0054495.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 381.3 bits (978), Expect = 5.2e-102
Identity = 189/191 (98.95%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 18  HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFP 77
           HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDA AADAMPDTDFP
Sbjct: 112 HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAVAADAMPDTDFP 171

Query: 78  PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR 137
           PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR
Sbjct: 172 PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR 231

Query: 138 IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRIVDDMKAFLEVPDHMKY 197
           IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMR VDDMKAFLEVPDHMKY
Sbjct: 232 IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKY 291

Query: 198 PYCSLILQENQ 209
           PYCSLILQENQ
Sbjct: 292 PYCSLILQENQ 302

[Close]

BLAST of MELO3C035618.1 vs. NCBI nr
Match: KAA0048362.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 381.3 bits (978), Expect = 5.2e-102
Identity = 189/191 (98.95%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 18  HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFP 77
           HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDA AADAMPDTDFP
Sbjct: 108 HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAVAADAMPDTDFP 167

Query: 78  PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR 137
           PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR
Sbjct: 168 PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR 227

Query: 138 IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRIVDDMKAFLEVPDHMKY 197
           IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMR VDDMKAFLEVPDHMKY
Sbjct: 228 IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKY 287

Query: 198 PYCSLILQENQ 209
           PYCSLILQENQ
Sbjct: 288 PYCSLILQENQ 298

[Close]

BLAST of MELO3C035618.1 vs. NCBI nr
Match: KAA0038122.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0047362.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0055248.1 retrotransposon protein [Cucumis melo var. makuwa] >TYJ97185.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK00369.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 380.6 bits (976), Expect = 8.9e-102
Identity = 189/191 (98.95%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 18  HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFP 77
           HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDA AADAMPDTDFP
Sbjct: 112 HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFP 171

Query: 78  PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR 137
           PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR
Sbjct: 172 PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR 231

Query: 138 IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRIVDDMKAFLEVPDHMKY 197
           IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMR VDDMKAFLEVPDHMKY
Sbjct: 232 IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKY 291

Query: 198 PYCSLILQENQ 209
           PYCSLILQENQ
Sbjct: 292 PYCSLILQENQ 302

[Close]

BLAST of MELO3C035618.1 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 380.6 bits (976), Expect = 8.9e-102
Identity = 189/191 (98.95%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 18  HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFP 77
           HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDA AADAMPDTDFP
Sbjct: 467 HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFP 526

Query: 78  PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR 137
           PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR
Sbjct: 527 PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR 586

Query: 138 IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRIVDDMKAFLEVPDHMKY 197
           IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMR VDDMKAFLEVPDHMKY
Sbjct: 587 IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKY 646

Query: 198 PYCSLILQENQ 209
           PYCSLILQENQ
Sbjct: 647 PYCSLILQENQ 657

[Close]

BLAST of MELO3C035618.1 vs. ExPASy TrEMBL
Match: A0A5A7TVM3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00960 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.1e-108
Identity = 200/206 (97.09%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 3   KKNASSLRKKSLTIGHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPG 62
           +KNASSLRKKSLTIGHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAE FADIGSNDPPG
Sbjct: 69  EKNASSLRKKSLTIGHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAEIFADIGSNDPPG 128

Query: 63  YDAFAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGD 122
           +DAFAADAMPDTDFPP YSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGD
Sbjct: 129 FDAFAADAMPDTDFPPTYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGD 188

Query: 123 IVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRIV 182
           IVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMR V
Sbjct: 189 IVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNV 248

Query: 183 DDMKAFLEVPDHMKYPYCSLILQENQ 209
           DDMKAFLEVPDHMKYPYC+LILQENQ
Sbjct: 249 DDMKAFLEVPDHMKYPYCTLILQENQ 274

[Close]

BLAST of MELO3C035618.1 vs. ExPASy TrEMBL
Match: A0A5D3DPR5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00580 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.5e-102
Identity = 189/191 (98.95%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 18  HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFP 77
           HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDA AADAMPDTDFP
Sbjct: 112 HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAVAADAMPDTDFP 171

Query: 78  PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR 137
           PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR
Sbjct: 172 PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR 231

Query: 138 IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRIVDDMKAFLEVPDHMKY 197
           IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMR VDDMKAFLEVPDHMKY
Sbjct: 232 IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKY 291

Query: 198 PYCSLILQENQ 209
           PYCSLILQENQ
Sbjct: 292 PYCSLILQENQ 302

[Close]

BLAST of MELO3C035618.1 vs. ExPASy TrEMBL
Match: A0A5A7TXU5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00810 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.5e-102
Identity = 189/191 (98.95%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 18  HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFP 77
           HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDA AADAMPDTDFP
Sbjct: 108 HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAVAADAMPDTDFP 167

Query: 78  PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR 137
           PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR
Sbjct: 168 PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR 227

Query: 138 IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRIVDDMKAFLEVPDHMKY 197
           IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMR VDDMKAFLEVPDHMKY
Sbjct: 228 IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKY 287

Query: 198 PYCSLILQENQ 209
           PYCSLILQENQ
Sbjct: 288 PYCSLILQENQ 298

[Close]

BLAST of MELO3C035618.1 vs. ExPASy TrEMBL
Match: A0A5A7UME4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold615G00290 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.3e-102
Identity = 189/191 (98.95%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 18  HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFP 77
           HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDA AADAMPDTDFP
Sbjct: 112 HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAEAADAMPDTDFP 171

Query: 78  PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR 137
           PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR
Sbjct: 172 PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR 231

Query: 138 IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRIVDDMKAFLEVPDHMKY 197
           IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMR VDDMKAFLEVPDHMKY
Sbjct: 232 IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKY 291

Query: 198 PYCSLILQENQ 209
           PYCSLILQENQ
Sbjct: 292 PYCSLILQENQ 302

[Close]

BLAST of MELO3C035618.1 vs. ExPASy TrEMBL
Match: A0A5D3CBF7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00350 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.3e-102
Identity = 189/191 (98.95%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 18  HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFP 77
           HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDA AADAMPDTDFP
Sbjct: 112 HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFP 171

Query: 78  PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR 137
           PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR
Sbjct: 172 PMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHR 231

Query: 138 IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRIVDDMKAFLEVPDHMKY 197
           IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMR VDDMKAFLEVPDHMKY
Sbjct: 232 IAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKY 291

Query: 198 PYCSLILQENQ 209
           PYCSLILQENQ
Sbjct: 292 PYCSLILQENQ 302

The following BLAST results are available for this feature:

BLAST of MELO3C035618.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046928.1	6.4e-108	97.09	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0035621.1	5.2e-102	98.95	retrotransposon protein [Cucumis melo var. makuwa] >KAA0041647.1 retrotransposon...	[more]
KAA0048362.1	5.2e-102	98.95	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0038122.1	8.9e-102	98.95	retrotransposon protein [Cucumis melo var. makuwa] >KAA0047362.1 retrotransposon...	[more]
ADN34114.1	8.9e-102	98.95	retrotransposon protein [Cucumis melo subsp. melo]	[more]

BLAST of MELO3C035618.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C035618.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TVM3	3.1e-108	97.09	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DPR5	2.5e-102	98.95	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TXU5	2.5e-102	98.95	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UME4	4.3e-102	98.95	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CBF7	4.3e-102	98.95	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C035618.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..121
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 18..206

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C035618	MELO3C035618	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C035618.1:exon:191777	MELO3C035618.1:exon:191777	exon
MELO3C035618.1:exon:191778	MELO3C035618.1:exon:191778	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C035618.1:five_prime_utr	MELO3C035618.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C035618.1:cds	MELO3C035618.1:cds	CDS
MELO3C035618.1:cds	MELO3C035618.1:cds_2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C035618.1:three_prime_utr	MELO3C035618.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C035618.1	MELO3C035618.1-protein	polypeptide