MELO3C035152.1 (mRNA) Melon (DHL92) v4

Overview
NameMELO3C035152.1
TypemRNA
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionNBS-LRR type resistance protein
Locationchr02: 22991750 .. 22992608 (-)
Sequence length637
RNA-Seq ExpressionMELO3C035152.1
SyntenyMELO3C035152.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGAGCAATCACGGACGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTATAACGACAATACGAGCTCGCAGAGAGAAAAGGAGAGCTGGTCGATCGTGTGGAGTTGTTCTGAGAAACACACGTTCGAGCTGGAACGTTCGTGTCGCAGGCCGCCGAGGATGCACATGTAAGTTTTGCCCTTATTAATTATCCACTTTCATTATATATTTTTGCGCGTTACTTAACATAGTTTTTAAATTTGTTGTAGAATCAAATGTTGGAACTCCAATCCCAGCCTACCCCAAAGGGTAGTCAGCCACTCTTTGAGGATGAAATATGCGATCAGGTGTTGGGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGGGGACCCAAGCCAAAGGCCCGCAGAACGATGAGTGCGAGCAATTCGTCGACATCTTGTTCGCAGTCCACAGAAAAAGATATTGAATTATAACTTAAACTTAATGAAGCTTTGGAACGGATTGAAGTACAAGATAGAAATCACCAAGCGTTAGCTTCACAAGTGGAAACAATGAAAAATATGATAGAAGAATTAACTCGTGCACAACAGGGAGCACCACATGATCCCTAGCTCTACAGTACGTATATATGTCTCTATTCTTCTTAAGTTTTTGCAATGATAGTATACAGTGAACATATGGATATATGTACTAAACTTAATTACTTTTATATCATTTTAGGACCGAATGTGTAGAATGAAGCATACACACCTCGTTGGGAGACTTTTTGTTATGTTTGCGTTTTCTTGTATTATGAGAACTACATTTTTTGTATTAAATTTACTAATATTTTGTGAACTTATT

mRNA sequence

ATGCAGGAGCAATCACGGACGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTATAACGACAATACGAGCTCGCAGAGAGAAAAGGAGAGCTGGTCGATCGTGTGGAGTTGTTCTGAGAAACACACGTTCGAGCTGGAACGTTCGTGTCGCAGGCCGCCGAGGATGCACATAATCAAATGTTGGAACTCCAATCCCAGCCTACCCCAAAGGGTAGTCAGCCACTCTTTGAGGATGAAATATGCGATCAGGTGTTGGGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGGGGACCCAAGCCAAAGGCCCGCAGAACGATGAGTGCGAGCAATTCGTCGACATCTTGTTCGCAGTCCACAGAAAAAGATATTGAATTATAACTTAAACTTAATGAAGCTTTGGAACGGATTGAAGTACAAGATAGAAATCACCAAGCGTTAGCTTCACAAGTGGAAACAATGAAAAATATGATAGAAGAATTAACTCGTGCACAACAGGGAGCACCACATGATCCCTAGCTCTACAGTACTTTTTGTTATGTTTGCGTTTTCTTGTATTATGAGAACTACATTTTTTGTATTAAATTTACTAATATTTTGTGAACTTATT

Coding sequence (CDS)

TGCAGGAGCAATCACGGACGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTATAACGACAATACGAGCTCGCAGAGAGAAAAGGAGAGCTGGTCGATCGTGTGGAGTTGTTCTGAGAAACACACGTTCGAGCTGGAACGTTCGTGTCGCAGGCCGCCGAGGATGCACATAATCAAATGTTGGAACTCCAATCCCAGCCTACCCCAAAGGGTAGTCAGCCACTCTTTGAGGATGAAATATGCGATCAGGTGTTGGGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGGGGACCCAAGCCAAAGGCCCGCAGAACGATGA

Protein sequence

CRSNHGRTRLLDRSSLTIIVAGPSRFYNDNTSSQREKESWSIVWSCSEKHTFELERSCRRPPRMHIIKCWNSNPSLPQRVVSHSLRMKYAIRCWVDDQATQKALVGDPSQRPAER
Homology
[Close]
BLAST of MELO3C035152.1 vs. NCBI nr
Match: KAA0058246.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 6.1e-60
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 3   SNHGRTRLLDRSSLTIIVAGPSRFYNDNTSSQREKESWSIVWSCSEKHTFELERSCRRPP 62
           SNHGRTRLLDRSSLTIIVAGPSRFYNDNTSSQREKESWSIVWSCSEKHTFELERSCRRPP
Sbjct: 171 SNHGRTRLLDRSSLTIIVAGPSRFYNDNTSSQREKESWSIVWSCSEKHTFELERSCRRPP 230

Query: 63  RMHIIKCWNSNPSLPQRVVSHSLRMKYAIRCWVDDQATQKALVGDPSQRPAER 116
           RMHIIKCWNSNPSLPQRVVSHSLRMKYAIRCWVDDQATQKALVGDPSQRPAER
Sbjct: 231 RMHIIKCWNSNPSLPQRVVSHSLRMKYAIRCWVDDQATQKALVGDPSQRPAER 283

[Close]
BLAST of MELO3C035152.1 vs. NCBI nr
Match: TYK28852.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 204.9 bits (520), Expect = 3.7e-49
Identity = 95/114 (83.33%), Postives = 105/114 (92.11%), Query Frame = 0 

Query: 2   RSNHGRTRLLDRSSLTIIVAGPSRFYNDNTSSQREKESWSIVWSCSEKHTFELERSCRRP 61
           +SNHG+TRLLDRSSLTIIVAGPSRFYND+ SS +E++S SIVW+C  KHTFEL  SCRRP
Sbjct: 110 KSNHGQTRLLDRSSLTIIVAGPSRFYNDSMSSLKEEDSQSIVWNCFGKHTFELGHSCRRP 169

Query: 62  PRMHIIKCWNSNPSLPQRVVSHSLRMKYAIRCWVDDQATQKALVGDPSQRPAER 116
           PRM IIKCWNSNPSLPQRVVSHSLRM+YAIRCWVDD+ TQKALVGDPS+RPAER
Sbjct: 170 PRMRIIKCWNSNPSLPQRVVSHSLRMRYAIRCWVDDETTQKALVGDPSRRPAER 223

[Close]
BLAST of MELO3C035152.1 vs. NCBI nr
Match: ADN34241.1 (NBS-LRR type resistance protein [Cucumis melo subsp. melo])

HSP 1 Score: 204.1 bits (518), Expect = 6.3e-49
Identity = 97/114 (85.09%), Postives = 104/114 (91.23%), Query Frame = 0 

Query: 2   RSNHGRTRLLDRSSLTIIVAGPSRFYNDNTSSQREKESWSIVWSCSEKHTFELERSCRRP 61
           RSNH RTRLLDRSSLTIIVAGPS FYND+ SS +E+ S SIVW+CSEKHTFEL  SCRR 
Sbjct: 17  RSNHRRTRLLDRSSLTIIVAGPSHFYNDSMSSLKEEGSRSIVWNCSEKHTFELGHSCRRL 76

Query: 62  PRMHIIKCWNSNPSLPQRVVSHSLRMKYAIRCWVDDQATQKALVGDPSQRPAER 116
           PRM IIKCWNSNPSLPQR+V+HSLRMKYAIRCWVDDQATQKALVGDPS+RPAER
Sbjct: 77  PRMRIIKCWNSNPSLPQRIVTHSLRMKYAIRCWVDDQATQKALVGDPSRRPAER 130

[Close]
BLAST of MELO3C035152.1 vs. NCBI nr
Match: KAA0036833.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYJ95900.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 200.7 bits (509), Expect = 7.0e-48
Identity = 96/114 (84.21%), Postives = 103/114 (90.35%), Query Frame = 0 

Query: 2   RSNHGRTRLLDRSSLTIIVAGPSRFYNDNTSSQREKESWSIVWSCSEKHTFELERSCRRP 61
           RSNHGRTRLLDRSSLTIIV GPSRFYND+ SS +E+ S SIVW+CS KHTFEL  SCRRP
Sbjct: 137 RSNHGRTRLLDRSSLTIIVEGPSRFYNDSMSSLKEEGSRSIVWNCSGKHTFELGHSCRRP 196

Query: 62  PRMHIIKCWNSNPSLPQRVVSHSLRMKYAIRCWVDDQATQKALVGDPSQRPAER 116
           PRM IIKCWNSN SLPQRVVSHSLR++YAIRCWVDDQATQKALVGDPS+ PAER
Sbjct: 197 PRMRIIKCWNSNLSLPQRVVSHSLRIRYAIRCWVDDQATQKALVGDPSRGPAER 250

[Close]
BLAST of MELO3C035152.1 vs. NCBI nr
Match: KAA0058973.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK11006.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 194.1 bits (492), Expect = 6.5e-46
Identity = 93/113 (82.30%), Postives = 99/113 (87.61%), Query Frame = 0 

Query: 3   SNHGRTRLLDRSSLTIIVAGPSRFYNDNTSSQREKESWSIVWSCSEKHTFELERSCRRPP 62
           SNHGRTRLL RSSLT IVA PSRFYND+ SS +EKES SI+W+C  KHTFEL  SC RPP
Sbjct: 221 SNHGRTRLLGRSSLTFIVASPSRFYNDSMSSLKEKESRSIMWNCFGKHTFELGHSCHRPP 280

Query: 63  RMHIIKCWNSNPSLPQRVVSHSLRMKYAIRCWVDDQATQKALVGDPSQRPAER 116
           RM IIKCWNSN SLPQRVVSHSLRM+YAIRCWVDDQATQKALVGD S+RPAER
Sbjct: 281 RMRIIKCWNSNISLPQRVVSHSLRMRYAIRCWVDDQATQKALVGDSSRRPAER 333

[Close]
BLAST of MELO3C035152.1 vs. ExPASy TrEMBL
Match: A0A5A7UVP6 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005710 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.9e-60
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 3   SNHGRTRLLDRSSLTIIVAGPSRFYNDNTSSQREKESWSIVWSCSEKHTFELERSCRRPP 62
           SNHGRTRLLDRSSLTIIVAGPSRFYNDNTSSQREKESWSIVWSCSEKHTFELERSCRRPP
Sbjct: 171 SNHGRTRLLDRSSLTIIVAGPSRFYNDNTSSQREKESWSIVWSCSEKHTFELERSCRRPP 230

Query: 63  RMHIIKCWNSNPSLPQRVVSHSLRMKYAIRCWVDDQATQKALVGDPSQRPAER 116
           RMHIIKCWNSNPSLPQRVVSHSLRMKYAIRCWVDDQATQKALVGDPSQRPAER
Sbjct: 231 RMHIIKCWNSNPSLPQRVVSHSLRMKYAIRCWVDDQATQKALVGDPSQRPAER 283

[Close]
BLAST of MELO3C035152.1 vs. ExPASy TrEMBL
Match: A0A5D3DZ15 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00610 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.8e-49
Identity = 95/114 (83.33%), Postives = 105/114 (92.11%), Query Frame = 0 

Query: 2   RSNHGRTRLLDRSSLTIIVAGPSRFYNDNTSSQREKESWSIVWSCSEKHTFELERSCRRP 61
           +SNHG+TRLLDRSSLTIIVAGPSRFYND+ SS +E++S SIVW+C  KHTFEL  SCRRP
Sbjct: 110 KSNHGQTRLLDRSSLTIIVAGPSRFYNDSMSSLKEEDSQSIVWNCFGKHTFELGHSCRRP 169

Query: 62  PRMHIIKCWNSNPSLPQRVVSHSLRMKYAIRCWVDDQATQKALVGDPSQRPAER 116
           PRM IIKCWNSNPSLPQRVVSHSLRM+YAIRCWVDD+ TQKALVGDPS+RPAER
Sbjct: 170 PRMRIIKCWNSNPSLPQRVVSHSLRMRYAIRCWVDDETTQKALVGDPSRRPAER 223

[Close]
BLAST of MELO3C035152.1 vs. ExPASy TrEMBL
Match: E5GCP2 (NBS-LRR type resistance protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.1e-49
Identity = 97/114 (85.09%), Postives = 104/114 (91.23%), Query Frame = 0 

Query: 2   RSNHGRTRLLDRSSLTIIVAGPSRFYNDNTSSQREKESWSIVWSCSEKHTFELERSCRRP 61
           RSNH RTRLLDRSSLTIIVAGPS FYND+ SS +E+ S SIVW+CSEKHTFEL  SCRR 
Sbjct: 17  RSNHRRTRLLDRSSLTIIVAGPSHFYNDSMSSLKEEGSRSIVWNCSEKHTFELGHSCRRL 76

Query: 62  PRMHIIKCWNSNPSLPQRVVSHSLRMKYAIRCWVDDQATQKALVGDPSQRPAER 116
           PRM IIKCWNSNPSLPQR+V+HSLRMKYAIRCWVDDQATQKALVGDPS+RPAER
Sbjct: 77  PRMRIIKCWNSNPSLPQRIVTHSLRMKYAIRCWVDDQATQKALVGDPSRRPAER 130

[Close]
BLAST of MELO3C035152.1 vs. ExPASy TrEMBL
Match: A0A5A7T1N6 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002030 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.4e-48
Identity = 96/114 (84.21%), Postives = 103/114 (90.35%), Query Frame = 0 

Query: 2   RSNHGRTRLLDRSSLTIIVAGPSRFYNDNTSSQREKESWSIVWSCSEKHTFELERSCRRP 61
           RSNHGRTRLLDRSSLTIIV GPSRFYND+ SS +E+ S SIVW+CS KHTFEL  SCRRP
Sbjct: 137 RSNHGRTRLLDRSSLTIIVEGPSRFYNDSMSSLKEEGSRSIVWNCSGKHTFELGHSCRRP 196

Query: 62  PRMHIIKCWNSNPSLPQRVVSHSLRMKYAIRCWVDDQATQKALVGDPSQRPAER 116
           PRM IIKCWNSN SLPQRVVSHSLR++YAIRCWVDDQATQKALVGDPS+ PAER
Sbjct: 197 PRMRIIKCWNSNLSLPQRVVSHSLRIRYAIRCWVDDQATQKALVGDPSRGPAER 250

[Close]
BLAST of MELO3C035152.1 vs. ExPASy TrEMBL
Match: A0A5A7USQ8 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold874G00430 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.2e-46
Identity = 93/113 (82.30%), Postives = 99/113 (87.61%), Query Frame = 0 

Query: 3   SNHGRTRLLDRSSLTIIVAGPSRFYNDNTSSQREKESWSIVWSCSEKHTFELERSCRRPP 62
           SNHGRTRLL RSSLT IVA PSRFYND+ SS +EKES SI+W+C  KHTFEL  SC RPP
Sbjct: 221 SNHGRTRLLGRSSLTFIVASPSRFYNDSMSSLKEKESRSIMWNCFGKHTFELGHSCHRPP 280

Query: 63  RMHIIKCWNSNPSLPQRVVSHSLRMKYAIRCWVDDQATQKALVGDPSQRPAER 116
           RM IIKCWNSN SLPQRVVSHSLRM+YAIRCWVDDQATQKALVGD S+RPAER
Sbjct: 281 RMRIIKCWNSNISLPQRVVSHSLRMRYAIRCWVDDQATQKALVGDSSRRPAER 333

The following BLAST results are available for this feature:
BLAST of MELO3C035152.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0058246.16.1e-60100.00NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
TYK28852.13.7e-4983.33NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
ADN34241.16.3e-4985.09NBS-LRR type resistance protein [Cucumis melo subsp. melo][more]
KAA0036833.17.0e-4884.21NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYJ95900.1 NBS-LRR t... [more]
KAA0058973.16.5e-4682.30NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK11006.1 NBS-LRR t... [more]
BLAST of MELO3C035152.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C035152.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UVP62.9e-60100.00NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3DZ151.8e-4983.33NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
E5GCP23.1e-4985.09NBS-LRR type resistance protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A5A7T1N63.4e-4884.21NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7USQ83.2e-4682.30NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
BLAST of MELO3C035152.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C035152MELO3C035152gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C035152.1:exon:60695MELO3C035152.1:exon:60695exon
MELO3C035152.1:exon:60694MELO3C035152.1:exon:60694exon
MELO3C035152.1:exon:60693MELO3C035152.1:exon:60693exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C035152.1:three_prime_utrMELO3C035152.1:three_prime_utrthree_prime_UTR
MELO3C035152.1:three_prime_utrMELO3C035152.1:three_prime_utr_2three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C035152.1:cdsMELO3C035152.1:cdsCDS
MELO3C035152.1:cdsMELO3C035152.1:cds_2CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C035152.1:five_prime_utrMELO3C035152.1:five_prime_utrfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C035152.1MELO3C035152.1-proteinpolypeptide