MELO3C034819.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C034819.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1
Location	chr12: 19437254 .. 19437524 (-)
Sequence length	271
RNA-Seq Expression	MELO3C034819.1
Synteny	MELO3C034819.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAATTGGACACCATACACGCCCGACATTATGGCATCGCTTTCTGTTAGATGTCAGAGTGGTCAAGCGGTTTGGACTTACGTGGGTCCATTGATTTGCTTCCATCTGGTCGAGAAACATCAACCAGATCGCGTATTGCGACAGTTTAATATGTTGCAAACGCCACCAGCGATTAGCTACACAGATCAGAGGTTGCATCAAATAGATTTAAGGGGTAAACATGATCAAGATTGGCGTCGGATTCATGCGGAACATATCAGAGTGTGGAATT

mRNA sequence

ATTAATTGGACACCATACACGCCCGACATTATGGCATCGCTTTCTGTTAGATGTCAGAGTGGTCAAGCGGTTTGGACTTACGTGGGTCCATTGATTTGCTTCCATCTGGTCGAGAAACATCAACCAGATCGCGTATTGCGACAGTTTAATATGTTGCAAACGCCACCAGCGATTAGCTACACAGATCAGAGGTTGCATCAAATAGATTTAAGGGGTAAACATGATCAAGATTGGCGTCGGATTCATGCGGAACATATCAGAGTGTGGAATT

Coding sequence (CDS)

ATGGCATCGCTTTCTGTTAGATGTCAGAGTGGTCAAGCGGTTTGGACTTACGTGGGTCCATTGATTTGCTTCCATCTGGTCGAGAAACATCAACCAGATCGCGTATTGCGACAGTTTAATATGTTGCAAACGCCACCAGCGATTAGCTACACAGATCAGAGGTTGCATCAAATAGATTTAAGGGGTAAACATGATCAAGATTGGCGTCGGATTCATGCGGAACATATCAGAGTGTGGAAT

Protein sequence

MASLSVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDLRGKHDQDWRRIHAEHIRVWN

Homology

[Close]

BLAST of MELO3C034819.1 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.6e-17
Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 1   MASLSVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 60
           +A + + C SG+ +W  V PLICF +VE H+PDRVLRQF + QT PA    ++ LH ID 
Sbjct: 329 LAKIPLICVSGENIWRTVAPLICFDVVEWHRPDRVLRQFGLHQTIPAPCDNEKALHAIDK 388

Query: 61  RGKHDQDWRRIHAEHIRVW 80
           RGK + DW   H+ HI +W
Sbjct: 389 RGKSEYDWSARHSRHIGLW 407

[Close]

BLAST of MELO3C034819.1 vs. NCBI nr
Match: TYK03303.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa] >TYK12342.1 serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 3.1e-39
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 1   MASLSVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 60
           MASL VRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL
Sbjct: 389 MASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 448

Query: 61  RGKHDQDWRRIHAEHIRVWN 81
           RGKHDQDWRRIHAEHI VWN
Sbjct: 449 RGKHDQDWRRIHAEHIGVWN 468

[Close]

BLAST of MELO3C034819.1 vs. NCBI nr
Match: KAA0042980.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 3.1e-39
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 1   MASLSVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 60
           MASL VRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL
Sbjct: 742 MASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 801

Query: 61  RGKHDQDWRRIHAEHIRVWN 81
           RGKHDQDWRRIHAEHI VWN
Sbjct: 802 RGKHDQDWRRIHAEHIGVWN 821

[Close]

BLAST of MELO3C034819.1 vs. NCBI nr
Match: KAA0054305.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 3.1e-39
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 1   MASLSVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 60
           MASL VRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL
Sbjct: 285 MASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 344

Query: 61  RGKHDQDWRRIHAEHIRVWN 81
           RGKHDQDWRRIHAEHI VWN
Sbjct: 345 RGKHDQDWRRIHAEHIGVWN 364

[Close]

BLAST of MELO3C034819.1 vs. NCBI nr
Match: KAA0051993.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 3.1e-39
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 1   MASLSVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 60
           MASL VRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL
Sbjct: 350 MASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 409

Query: 61  RGKHDQDWRRIHAEHIRVWN 81
           RGKHDQDWRRIHAEHI VWN
Sbjct: 410 RGKHDQDWRRIHAEHIGVWN 429

[Close]

BLAST of MELO3C034819.1 vs. NCBI nr
Match: TYK25184.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 3.1e-39
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 1   MASLSVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 60
           MASL VRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL
Sbjct: 355 MASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 414

Query: 61  RGKHDQDWRRIHAEHIRVWN 81
           RGKHDQDWRRIHAEHI VWN
Sbjct: 415 RGKHDQDWRRIHAEHIGVWN 434

[Close]

BLAST of MELO3C034819.1 vs. ExPASy TrEMBL
Match: A0A5A7TSW1 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00240 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.5e-39
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 1   MASLSVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 60
           MASL VRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL
Sbjct: 307 MASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 366

Query: 61  RGKHDQDWRRIHAEHIRVWN 81
           RGKHDQDWRRIHAEHI VWN
Sbjct: 367 RGKHDQDWRRIHAEHIGVWN 386

[Close]

BLAST of MELO3C034819.1 vs. ExPASy TrEMBL
Match: A0A5D3BUF5 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001440 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.5e-39
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 1   MASLSVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 60
           MASL VRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL
Sbjct: 389 MASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 448

Query: 61  RGKHDQDWRRIHAEHIRVWN 81
           RGKHDQDWRRIHAEHI VWN
Sbjct: 449 RGKHDQDWRRIHAEHIGVWN 468

[Close]

BLAST of MELO3C034819.1 vs. ExPASy TrEMBL
Match: A0A5A7TI34 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00540 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.5e-39
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 1   MASLSVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 60
           MASL VRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL
Sbjct: 742 MASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 801

Query: 61  RGKHDQDWRRIHAEHIRVWN 81
           RGKHDQDWRRIHAEHI VWN
Sbjct: 802 RGKHDQDWRRIHAEHIGVWN 821

[Close]

BLAST of MELO3C034819.1 vs. ExPASy TrEMBL
Match: A0A5A7UKU7 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00240 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.5e-39
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 1   MASLSVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 60
           MASL VRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL
Sbjct: 285 MASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 344

Query: 61  RGKHDQDWRRIHAEHIRVWN 81
           RGKHDQDWRRIHAEHI VWN
Sbjct: 345 RGKHDQDWRRIHAEHIGVWN 364

[Close]

BLAST of MELO3C034819.1 vs. ExPASy TrEMBL
Match: A0A5D3BQW5 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00920 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.5e-39
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 1   MASLSVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 60
           MASL VRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL
Sbjct: 256 MASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 315

Query: 61  RGKHDQDWRRIHAEHIRVWN 81
           RGKHDQDWRRIHAEHI VWN
Sbjct: 316 RGKHDQDWRRIHAEHIGVWN 335

[Close]

BLAST of MELO3C034819.1 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )

HSP 1 Score: 88.2 bits (217), Expect = 3.3e-18
Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 1   MASLSVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAISYTDQRLHQIDL 60
           +A + + C SG+ +W  V PLICF +VE H+PDRVLRQF + QT PA    ++ LH ID 
Sbjct: 329 LAKIPLICVSGENIWRTVAPLICFDVVEWHRPDRVLRQFGLHQTIPAPCDNEKALHAIDK 388

Query: 61  RGKHDQDWRRIHAEHIRVW 80
           RGK + DW   H+ HI +W
Sbjct: 389 RGKSEYDWSARHSRHIGLW 407

The following BLAST results are available for this feature:

BLAST of MELO3C034819.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNG5	4.6e-17	49.37	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana...	[more]

BLAST of MELO3C034819.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK03303.1	3.1e-39	97.50	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
KAA0042980.1	3.1e-39	97.50	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
KAA0054305.1	3.1e-39	97.50	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
KAA0051993.1	3.1e-39	97.50	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
TYK25184.1	3.1e-39	97.50	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]

BLAST of MELO3C034819.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TSW1	1.5e-39	97.50	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5D3BUF5	1.5e-39	97.50	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5A7TI34	1.5e-39	97.50	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5A7UKU7	1.5e-39	97.50	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5D3BQW5	1.5e-39	97.50	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]

BLAST of MELO3C034819.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48120.1	3.3e-18	49.37	hydrolases;protein serine/threonine phosphatases	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019557	Aminotransferase-like, plant mobile domain	PFAM	PF10536	PMD	coord: 10..79 e-value: 3.3E-10 score: 39.7

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C034819	MELO3C034819	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C034819.1:exon:359646	MELO3C034819.1:exon:359646	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C034819.1:three_prime_utr	MELO3C034819.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C034819.1:cds	MELO3C034819.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C034819.1:five_prime_utr	MELO3C034819.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C034819.1	MELO3C034819.1-protein	polypeptide