MELO3C032897.jh1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview
NameMELO3C032897.jh1.t1
TypemRNA
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 1604159 .. 1610997 (+)
Sequence length745
RNA-Seq ExpressionMELO3C032897.jh1.t1
SyntenyMELO3C032897.jh1.t1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAGAAATCAATCACTAGCCAGTGTAAGCATCCCATACTACCATAGTGCTAGAACTTTTCTCCTCAATCCTAGTCAGGGACGATTGTTTTTGTATCCTCGAATGAGATGAATACATGGTATTTTCAAGAGGTAGTGGTTTTAGTGATACTGCAATTCAAATTTCCATTTCCTAATACTTCGACAGGGTTGGTTGGTGGCAATTTGGCATCTATTTACACTCCTCTAATATTATTCATGCTAAATCATTCGTTTAATTCTTTAAGACAGTTAGGGGAAGCCTGGACTGGAACGAGGCATGAAACAGAGGAGACAAGGGAATCATATGATCGTAAAGAAAAGAGCCTGCGGCAAATGAAAATATCCAAAGTAATGGAAGCTTCTGAAATTAGCTGGTATCCATCCTCTGCTTCATCTAAGGAACACTACCTTGTTTTCACAAAAAAAAAAAAAAAAAAAAAAAAAAAATCCTTTAGATCCTCCTTTAACAGAATTTGCTTTACAGCCTACTATGACCTAATATTCTGCAATAAATGGTCCCGAGAAATTGATAATACTCTAGAGGCTGAACCTAATTGACAACTTGAAGTAAATGATATAATACGGTTCCAAGTACCAATTCAATGCCGTACATAAAGCATCCATAAACTGCCATAAAATTTCCAGCTATTTCTTGAGGCACTGCTAGAGGATTTGAGGCCAACAGAAGAGAAATAGTAAAAAGAAACAAGGATATAGTTGTTTTATCTATATCTTCGTCTCTTTTTTTTTCAAGACCATTGCGGCTTTTTCTTATTAACGTTCTTCACTCTTTCTTTTAATTATTTGGGCGTGTTTTTTAGTTATCTCTTGACGATGTCCCAAGGATAAACATGAGGAGGTTTAGATTGTCTTATGAAGCTACTCTGAATATTACTTTTATATAAAATCAGATCCAATATGTCCCAAAGAGATTTCATTTGAATAAATAAATATATCCCAAAGAGAAATCCGGTACCACGACTCTTACATAGGTTGTTATGAGGTTGGTGTACGTAGATGTGATAGAGTGCTGAGTGATAATTGGATTTGCCTATCTGGCTAGACAAAGCTGAAAAGATGGTCCTCATGGCCCAGCTCATTTGTAGTTCAGCAAATAGTCAGCCTAACTTCCCCTTTCTTTGTTTGTCTGGTTTTGTTTTGTTTTGTTTTTTTCTTCTTTTTTTTTCCGCCCAGAGTCTCAATTTTATCCAACTTATCAACGTAAAGAACTAATAGAAATCAAATATATGTCAGTGGTAGTTTACCATTTTCTATTTTTGTTTTTTGGTTAAGACTTTTTCGATGTTGACTAGCATTTTACCAAAAATAAAAAATCTGTCTTTTAATTCCCTGTGGCCACGTTTTGATATCGTATACATGTGCAGATTTGTGGAATGCAGTCAAAAAGAGTTGGACAGTTTAAAGAGGAAAAGAATTGTAGACATTGGATGAGGTTTAAAGAAGAAGCGGCCACTGAAGTTAATGCTAATTCTAGCAATGGGAATTTGGCCACTGACAAATTGTCCGCCACAACAAATTGACCAAATGACAAACTGGAGCTTATTTTAGGTGTACTCTGGGAGCAAGTCATATTTCCTCTTTTCATAACTGAAAATTGAAGTTGGTATCTAATTCGTCCCTAGTGAATGAAGGTGAACTCATGAGCTTGTTCCAAACCCAACTTCTGTAGTTTTGAGCTAATCTGAATGTAGTTTAAAAGTCATTAAGATAAAACACCCATCTTAAACGCTTTCCAAATCCACTATTTGTAAAGTTAATCTGCAAAGTCCAAATCTCTATTGAATCGATTTTCTTCAGTCTTTTATCTTAAAAATAAGATCTACCTAGAACCCAAGTTTTCACTCTTGATCTGCAATCCCATCTGCTATTTAAACAGCAGAAAAGAAAGAGATAAAAAGATGTATAATAACTAAAGTTTTCACTCCATTTCTTTAGGTGTGTAGACATTATTCATTGTGCTAGAAAATTATAGCTCCTTAATCTGTCGCTTAGGAAAATGAGAACCCAACATTCCCAACATGATATACATTTTAGTTCTCCATTTACTCCTGTCAATGCAAAAAAATGCCTAATGAACCCAACAAAATGTGTGCAGACAGTCTTGAATTGATTAGATATTTGCATACCTGTAAAATGGAATTAAGGCTCAAGCTGCTTTTGTCTGAAGCTTCTTGGACAACAGTTGGCTAGCAAATTTCTGAACCTTCATAATGTTCAAACTCGTGAAGGAATTCAGAGTTGGGCTTCCGATAAGGAAATGAGAAAAATTTTACTAATGAAAATGCCATGGAAGGATATCTTTTCCTCATAGTTGGGATGATTGAGCATGAGTAGATTATTGTTGTTAACAAGAGCTCGGACTAATATATCCTTGGCCTCATTTTGCTTCTTTTTTAGCATATTGCACATCTGGTAAAAAATTAAAACAATAGATTCATCAGGTCTCTACATTAGGTTACTCTAAAAGTGTAAAGTTTGTATTTGCAACATTACTGAAAGCATTTAATTTTCTGATACAAGGTTGTTTTCATGTTTTCATTTTGTCAATTCATTGGTGGTCTTTGTACGTCTTAGCTCCTTTTTCCAAATGAAAATCATCAGAATATTACTTTTCAATCTGACAAAGTGCAAAATATTCTACAGTTCTTACATCTTCAAGCTGCTGTGAATAGGCTTCTGCTTTTTCAACATTTCGATCATTTTCCAAAACCAAAGATACTTCCAATTCCATCACATTTGGCACACGAGTGTCTTCGATACTGTCGGCTAATTGGTCATGGGAGGCAGTGGTCATTCGTTCAACCTGATTTCACCAAAAATGGAAAACGGAATGGAAATTTAACAGACATTGGCTCGTATTTTTATTTCTTAAATCCATTCAACCAATTGCCGAACCTGTTCTATCTTTTTCACCAATGGATCTTTGGAGTGTCTGCAAGTGATTTGGGAAAGCAACTAATTAATCAAGAGAATCATCCAATGAATAAAAAAGATGAATGAGATTAATGATATGCTGTCACCTAAATCCACCAGGTGATACACAAAAGAGCTTCAGGGGTTTTAACAATATCGAATCTGCATTTGGTCCCTGTAAATAGGTTTGGAGTAAAAAATCTGTAATGACTACTTGAATCTTAGGGAAAGAATTTTTTGAGGTCTTGGGACTAAAAAGCAAAATTATTCTAAACACCTCAGTGACGTGGACTTATCACTTATGAGCTAAAGATATAAACCTCTAGTGCTTTACGCTTAAGTTTTTGTTTCTCCTGGTTTTCAGCACAGTAGCCAATGTCAAAGCTTTTACTTCTTTGTCTTGCTTCCGTATCTAGTTCTGATTCTCTTAATTTCTTTTCTTGCACACCTCCAGTCCTCGAGAGGACTTGCTTTCCTCCAAATCCCCTAAACAAAAAAGAATGAGGTGATCTTACAAATATTAATCAGTATAATTTGAAGGTTCGAGAAAAAAAAAAAAGCATACGAACACCATACCTAGAAGTCTTCAAGCTGGAAGGATTCGGAAATATTAAGCTAGCTTTAATAGAACATAGTTTATTCCCTTGAGCTGAAATGGTCTTCGCGTTTTGACTATGTATCATTGATGATTTTTGTGGTTCCATACTGCAATGTGTTTGAGTAGTTTTTCTTGCACACGAATTGCTAGGATTAACTCTGGTACTGCAAGAATAAGCAATAACATAAAAAAAGAAAACATATACTATTCTGCACATCCTTGTTAGGTTTAGGCAATTCCACCTCAAAATGAAGTTTAAGACATAGTCCAAGCGTAAAATAAAACACCCATAGTATGCCAAACCTTAAAGTACCAAGCTTTCCTAAGCTTTTTTCACGTTGTACTGCAACTGGCGGAGCTGTCTTTGCTCCTTTATTATGTGGTCGAGAGTCTCTGCAGAGGTTCCTGTGATTTGTTAATAAACAGAAGAAAAACATCGGGGCCATATTATTGAATGGAATGGCCATTGCCAAATCATGGGAAAAGTGCAATTTCCAACTGTCATGAACTCTGAATTTCAAACGTCTATGGTATAATGACATTTAACAAAGCCAATATGAAGCTGTAGAGGCTCGAACTGAAAAGTTCATATTAAGAACCCTAGCTTAGGCTGCTATTACAGTCTTTCCATGGTCATATACTGCAATCATCGTGTTTGTTGTTTGTCAACCATCAAATGTCATACCATATAGTTGATCAAATGCCAATAGTGCGATTGTAATATAAAGCACATTTTCATAAGGGGCATTTGTTATTAGAAAACAGCGTACCCGTCTCCAGCTGCCGGAATTTGACTTGGAGCATCAGTTCTATTCGTGCCTAAAGAGAAAAGTTTTGTACTAATAGATGATGGTTGTAGCTGAGATTTGCTAACATCTGTCCTTGACATCGATGAATTCCCACCCATTTCTTTTTCTTTAACTGTCACTTCATTTATTGGCCGTCCTCTGCATCAGGAATTTGCAAAAGAAAAATAAAATTTATGAGATTCTATCATGCATTTCTTTGAAAGCTCAAATCATGGATGTGCTATTCATAATTGCACAACATCTCTAGCACAGTAATTCGTTAAACATGAGTTTGTGCAAATACACGAGGCAAATAATTTCCAGCTGTGTATTTCTATTCAACGATTTTCACATTTCCAATGGAAAACATCAGAATTAATTAATCTAAGTAAACTTTTGTACTAAAATATTTTGTTTATCTAATGCTGTAATATGATAAAGCATAATATTTAACCTGCTTAAGGGAACTGTAGACAATTTCAATTTCAAATTTTGGTTTTCTCTGATTTCCTGCGTGTCAAGCAGAAGCTTCCTCGGGACATCTGAATTTGAAAAATCTTTGACATCTAAATGAACTTCAGCCAGTTGAACATTATCGATAAATTTATTCAGATCGTTGCATTCTGACTTATTCTTTTCTGATGCAGGGATATTTATTGGAGACAAATAGCTTTGAGGCAATTTTCTAGAGCAAGTTACATCAGAATCTATGTTTTCATCAGTGACATTTCTAGTTCCACCTGAAACTAATGTTAGTTCTACTCTTTCCGAACAAATTTCAGACTGTGGTTCTGAAGTACTTTCAGGTGCATTTCTGGCAACACAGTTGACAGGTACATCATGAATGACTTGATGACTATTCTTTGCCACTTCTTTTTCAGACAAGCAACCTTTTTCAAATTGCTCCTCTTTATTTGTAGTTGGTGTTGTAGTTCTTGCTTCATGTGATGTACCATCCACTTCTTCTGACTCTAGCTCACCACAATCTTCCTGAAAATTCTCAACTGTAGAACTAGTCTCGTTTCCTGATGCTGGAAGTCTCTTGGCTATACTACTATCAATTGCAGTATTTTCTTCAGCTATGTGGATATTAGAAGCTTCACACTCAACTCTAGAAGAAGAAACTGCCTTGGAATCTTGCTGTCGTATACCACTCTTTTCTCCATTTTGTAAGCTTTTATCAACATCAAAGCCATCCAATCTTATTCCAGACATAAGTAAAAATGAGAAGTTGTAAGTTAGGGTTCAATCGCATGGCTGTCTAAAATTCAAAAGACAGTTCTTGAGTAATAAGAAACGTTTCTCTAATTGTGTTTTCCACTTACTCTTTAAAATCAAAAGAGAAATTTAAGTTGTCTATATCTTTTTGATTATTTCCAATGGATGATCCTTCTTTACCGCTACTCCTAGCCTTTTCAATCTTTTTCTTCTCGTTTCCTGATGCCGGAAGTCTCTTGGCTATACTATTATCAATTGCAGTATTTTCTTCAGCTATGTGGATATTAGAAGCTTCACACTCAACTCTAGAAGAAGAAACTGCCTTGGAATCTTGCTGTTGTATACAACTCTTTTCTCCATTTTGTAAGCTTTTATCAATATCAAAGCTATCCAATCTTATTCCAGACATAAGTAAAAATGAGAAGTTGTAAGTTAGAGTTTAATTGCATGGCTGTCTAAAATTCAAAAGACAGTTCTTGAGTAATAAGAAATGTTTCTCTAATTGTGTTCTCCACTTACTCTTTAAAATCAAAAGAGAAATTTAAGTTGTCTATATCTTTTTGAATATTTCCATTGGATGATCCTTCTTTACCGCTACTCCTAGCCTTTTCAATCTTTTTGGGTGGGGATGAAAAGTCGAGATCTGGCATGTCAATCTTGAATGATGATAACTTTTCAAAACTTCCATCCAGATTGAAATCATCATCCCTGAAGAAAAGAAATAATATTTTTCAATGACATGAAGCATCCATTGATAATTTTCTGCCATAGAGTTTGAGATCCCACATCGCTGGATCTTTTAATGCATGAACATGAAAATGGCACTGTGGCAAGAAAAATATCCATAAGTGAGACTGATGAGGCTTGGAATATGATTGAAGGTGATCTATCCAAAAGACTTCAAATTTCTAGTTGGCAATACTTACAAAGTTCCAAAATCAAAGGCCTTAATCTTCCCTTTCGAGGCTGTACTAAAACTGAAGTCCACCATGTCATCCTCTGTCACTGATATTGATTTCCAGGACTTCATAAATTCGTTGCCAATGTCCTCATCTGTGTCAAGGAGAGTAGAGGTTCCATTACCTTTTTTTAGGACCTTACAATAAAAAATTCAGCCATGTTTACATTAATTGCAGTTTGAACACGACATCTGAAAATAGATATGAAAGCTAAAAGTGCATACCAAGAAGGGAATCCTTTTTACTAAGATCAGTAGCTGAAGATGCTCCTTTCCTTGATTCTGCCATCCGCTTCTGCTGCACTCGTTTAGACCCCTAG

mRNA sequence

ATGAATAGAAATCAATCACTAGCCAGTTTAGGGGAAGCCTGGACTGGAACGAGGCATGAAACAGAGGAGACAAGGGAATCATATGATCGTAAAGAAAAGAGCCTGCGGCAAATGAAAATATCCAAAGTAATGGAAGCTTCTGAAATTAGCTGGTATCCATCCTCTGCTTCATCTAAGGAACACTACCTTATTTGTGGAATGCAGTCAAAAAGAGTTGGACAGTTTAAAGAGGAAAAGAATTGTAGACATTGGATGAGGTTTAAAGAAGAAGCGGCCACTGAATTCTTACATCTTCAAGCTGCTGTGAATAGGCTTCTGCTTTTTCAACATTTCGATCATTTTCCAAAACCAAAGATACTTCCAATTCCATCACATTTGGCACACGAGTGTCTTCGATACTGTCGGCTAATTGGTCATGGGAGGCAGTGGTCATTCGTTCAACCTGATTTCACCAAAAATGGAAAACGGAATGGAAATTTAACAGACATTGGCTCGGATATTTATTGGAGACAAATAGCTTTGAGGCAATTTTCTAGAGCAAGTTACATCAGAATCTATGTTTTCATCAGTGACATTTCTAGTTCCACCTGAAACTAATGTTAGTTCTACTCTTTCCGAACAAATTTCAGACTGTGGTTCTGAAGTACTTTCAGGTGCATTTCTGGCAACACAGTTGACAGTAGCTGAAGATGCTCCTTTCCTTGATTCTGCCATCCGCTTCTGCTGCACTCGTTTAGACCCCTAG

Coding sequence (CDS)

ATGAATAGAAATCAATCACTAGCCAGTTTAGGGGAAGCCTGGACTGGAACGAGGCATGAAACAGAGGAGACAAGGGAATCATATGATCGTAAAGAAAAGAGCCTGCGGCAAATGAAAATATCCAAAGTAATGGAAGCTTCTGAAATTAGCTGGTATCCATCCTCTGCTTCATCTAAGGAACACTACCTTATTTGTGGAATGCAGTCAAAAAGAGTTGGACAGTTTAAAGAGGAAAAGAATTGTAGACATTGGATGAGGTTTAAAGAAGAAGCGGCCACTGAATTCTTACATCTTCAAGCTGCTGTGAATAGGCTTCTGCTTTTTCAACATTTCGATCATTTTCCAAAACCAAAGATACTTCCAATTCCATCACATTTGGCACACGAGTGTCTTCGATACTGTCGGCTAATTGGTCATGGGAGGCAGTGGTCATTCGTTCAACCTGATTTCACCAAAAATGGAAAACGGAATGGAAATTTAACAGACATTGGCTCGGATATTTATTGGAGACAAATAGCTTTGAGGCAATTTTCTAGAGCAAGTTACATCAGAATCTATGTTTTCATCAGTGACATTTCTAGTTCCACCTGA

Protein sequence

MNRNQSLASLGEAWTGTRHETEETRESYDRKEKSLRQMKISKVMEASEISWYPSSASSKEHYLICGMQSKRVGQFKEEKNCRHWMRFKEEAATEFLHLQAAVNRLLLFQHFDHFPKPKILPIPSHLAHECLRYCRLIGHGRQWSFVQPDFTKNGKRNGNLTDIGSDIYWRQIALRQFSRASYIRIYVFISDISSST
Homology
The following BLAST results are available for this feature:
BLAST of MELO3C032897.jh1.t1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C032897.jh1.t1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C032897.jh1.t1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C032897.jh1.t1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C032897.jh1MELO3C032897.jh1gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C032897.jh1.t1.exonMELO3C032897.jh1.t1.exonexon
MELO3C032897.jh1.t1.exonMELO3C032897.jh1.t1.exon_2exon
MELO3C032897.jh1.t1.exonMELO3C032897.jh1.t1.exon_3exon
MELO3C032897.jh1.t1.exonMELO3C032897.jh1.t1.exon_4exon
MELO3C032897.jh1.t1.exonMELO3C032897.jh1.t1.exon_5exon
MELO3C032897.jh1.t1.exonMELO3C032897.jh1.t1.exon_6exon


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C032897.jh1.t1.start_codonMELO3C032897.jh1.t1.start_codonstart_codon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C032897.jh1.t1.cdsMELO3C032897.jh1.t1.cdsCDS
MELO3C032897.jh1.t1.cdsMELO3C032897.jh1.t1.cds_2CDS
MELO3C032897.jh1.t1.cdsMELO3C032897.jh1.t1.cds_3CDS
MELO3C032897.jh1.t1.cdsMELO3C032897.jh1.t1.cds_4CDS
MELO3C032897.jh1.t1.cdsMELO3C032897.jh1.t1.cds_5CDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C032897.jh1.t1.stop_codonMELO3C032897.jh1.t1.stop_codonstop_codon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C032897.jh1.t1MELO3C032897.jh1.t1-proteinpolypeptide