MELO3C032829.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C032829.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr07: 22716114 .. 22718730 (-)
Sequence length	2462
RNA-Seq Expression	MELO3C032829.1
Synteny	MELO3C032829.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCAAACCAAACGAAATCTGAAACCCGGAAATGGGTCTATCAACAGGTTGGTAATGGCGCCCAATGAATAATCCTTCTGATTGCGACAAATTAAGGTTTGAAATCAAAAGATTAAGCGGCCATTGTTGTCTTTCATTTTTTTTTTTTTTTTAAGATTTTGAACAGATGAGCTTTGAAATTTGATGTTTGATTCACTGTTTTACAGTTCCATTCCACACCAGTGAAAAAGATCTGGTTGATTGAAACTGATTACTACCATCAATACAACGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAATTGTAAGGGAAGATCAACGCCAGGAAGATACAGTTAAGAGAGGAACGTCGTTCCATGCCAGAGAAAGAAATTCCGGCGCCGATTCGATCAGAGTGTAGAGAGAACTGTAATTGTAATTCCATAGAAGTATTTTCGCCTGACTAATGGCGTAATGGCTGAGTGCTACAGGTTCGAATCCGGTGTTTTCCATCAAATTCTTCCATTGTTCTTTATCTTCCATGCGTACTCTTCTTTCGCGTCTTGAATCTTCTACGGTTCCAACCACGCCGGCGATTCGACGGCCGAGTAATAGTTTTTCTAATTGAAGTCTTTCTGGTGAGTCTCGAGGCAAGTTCGGCTCTAGCGATTCGAAAATGGAGGAGTAGAATTTGAGAGCGTTCTTGAAACGACTGTAGAATCCGTTCCGGTTCAAACTCGCTTCATACTCACCGAGAGTCACTATTTGAGGACTCAACGATTTTGCTAATCGGAGAGCATTATGAACTCCGGTTGAATTCTCATCCAGGAGATTGTACAATTGAAGCATGAAATTCACGGCCAATACCTCGTCTGATTGAACGCTGAAGCTCGATTCCTTCAGGTTTTCAATCGGCGTTAGAATCGGTTGGAACTCGAAATTCAATTCCAGAATCTTTGCGAACTCGGAGAGTCTGTTACCAGTGGCGTATAGAGACGCTGCCGGTGAGTCTCCGAGCGACGGCGCTGGTATTCCGGAGATACGAACCCTGACAGGTTTTCCGGTGGCGCGCGTTGCCAAAGCCTGCAGAAGGGCCGCCCATTGGACACCTTGAACGATTCCGAAGTCGACAATGTGAATTTTACTTGCTCTCTGTGTAACTTCCAGAATTGCTTGGTTGGCCGTGAGATGGGCGAACTTGGAGTAAGGACAGGCATCGTTAAGAGCTTTGTATGAGAGCAAGAAATCTTCAGAATTAGCATCGCTCTCAGTTGAATCCAAGCAATTCTTCATCGCCGTCAAGGACAATCTCTTCCGAAGAGCCTCACCAAAGTAAAACCCCACTCGCTCAATCGGATCTCCATCCTCTCGTAACGATTTACTAATCCGATTAAGAGTTTTCGCTGCACGGTTAGGCTCAGAATCACACAGCCGCGCACAATCAAGCAACACTTTCAGAACCGGCGACGATGACTCCACTTCTAATGCACTCGATGAGCCTTCAACAACATCATTCTTCAACGGCCTCTCCGCCGGTGGATTCGTTACTCTCTCCTCCTTCACCAATGGAGGACATGACGGCCATGGAGGCGGAACACTATTAATCTTGTACGAGTTTTCCAAGACAACAACTGACGGCGGAGAGCCATCAAACGGATCTGCACCATAAAGACCAAACTCACCATAACCTTCACAACCAGACGGCAAAGTGGAGCTATCCGTGGAATCTCCACCACCGACTAAACTATCCATCCACTCATCAGATTCAAACTCTCCACCAGCGCCACTAAAATTAGGGAAGAATCGAAATCCGGCAGAAGGGTGGTCCAAATTAGGGAAATGAAAAGAAGGGTCGGAGGAATCAGGAGGTGCGGCGACATGAAAAGGGTCAGAGAAGGAAGAGGAAGAAATCCCAAAAGAGAAGTTAGGAGAAGAAGAAGAAGAAGAAGCCATAGTTGAGGAAGGATTGATGTTATTAGTCCAAGGAAGAATAGAAAAAGGGGAAAGTGGAGAAAGATGGTGTTGCTGTTGGTCTTGCTGTTGTTTTTGGTTGATGAGTTGTTGAGCAATAGCCATTAGATTACCACTGTCTGCGCACATATACGCCATTAAATCAGAAGAAGCAGAGAGAAAAAGGTGGGATGCGACTCACATTACCAGAAGAAGAAAGATGAAGAAGAAAATGGGGAAACAAAGAGAGAGTATGGACAAAGGGAGGAAATAAATGGAGGAAACAAAAGAACAGAGTGTGGACCAGAGGTTTGAAGGAGAAGGAGAAGGAGAAGAGAAGGAGAAGGAGAAGGAGACGAAGAGAGGGAGTGTGGAAATGAGATTTGGAATGGTAGAAATAATAAAAAGGTGTGAGTGAGTGTAGAGGATTGGAGTCAAGGCCGTTGAAGGACGAAAGGGAGTGGACCCCACTTTTCCCATTTAGAACAAAATTGTAAGAGGACAGAGAGTGTGTGAGAAAGAGATTTTTGGGTACTCTTTTGGGCCCCAATTTTTGCTTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTTTCTTCCTCTAAAATCCAAAAACTACTATTTTCGAAATTACACTACCCTTTCAATTTCAAATATCATTTCACATG

mRNA sequence

ATGGACCAAACCAAACGAAATCTGAAACCCGGAAATGGGTCTATCAACAGGTTGTTCCATTCCACACCAGTGAAAAAGATCTGGTTGATTGAAACTGATTACTACCATCAATACAACGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAATTGTAAGGGAAGATCAACGCCAGGAAGATACAGTTAAGAGAGGAACGTCGTTCCATGCCAGAGAAAGAAATTCCGGCGCCGATTCGATCAGAGTGTAGAGAGAACTGTAATTGTAATTCCATAGAAGTATTTTCGCCTGACTAATGGCGTAATGGCTGAGTGCTACAGGTTCGAATCCGGTGTTTTCCATCAAATTCTTCCATTGTTCTTTATCTTCCATGCGTACTCTTCTTTCGCGTCTTGAATCTTCTACGGTTCCAACCACGCCGGCGATTCGACGGCCGAGTAATAGTTTTTCTAATTGAAGTCTTTCTGGTGAGTCTCGAGGCAAGTTCGGCTCTAGCGATTCGAAAATGGAGGAGTAGAATTTGAGAGCGTTCTTGAAACGACTGTAGAATCCGTTCCGGTTCAAACTCGCTTCATACTCACCGAGAGTCACTATTTGAGGACTCAACGATTTTGCTAATCGGAGAGCATTATGAACTCCGGTTGAATTCTCATCCAGGAGATTGTACAATTGAAGCATGAAATTCACGGCCAATACCTCGTCTGATTGAACGCTGAAGCTCGATTCCTTCAGGTTTTCAATCGGCGTTAGAATCGGTTGGAACTCGAAATTCAATTCCAGAATCTTTGCGAACTCGGAGAGTCTGTTACCAGTGGCGTATAGAGACGCTGCCGGTGAGTCTCCGAGCGACGGCGCTGGTATTCCGGAGATACGAACCCTGACAGGTTTTCCGGTGGCGCGCGTTGCCAAAGCCTGCAGAAGGGCCGCCCATTGGACACCTTGAACGATTCCGAAGTCGACAATGTGAATTTTACTTGCTCTCTGTGTAACTTCCAGAATTGCTTGGTTGGCCGTGAGATGGGCGAACTTGGAGTAAGGACAGGCATCGTTAAGAGCTTTGTATGAGAGCAAGAAATCTTCAGAATTAGCATCGCTCTCAGTTGAATCCAAGCAATTCTTCATCGCCGTCAAGGACAATCTCTTCCGAAGAGCCTCACCAAAGTAAAACCCCACTCGCTCAATCGGATCTCCATCCTCTCGTAACGATTTACTAATCCGATTAAGAGTTTTCGCTGCACGGTTAGGCTCAGAATCACACAGCCGCGCACAATCAAGCAACACTTTCAGAACCGGCGACGATGACTCCACTTCTAATGCACTCGATGAGCCTTCAACAACATCATTCTTCAACGGCCTCTCCGCCGGTGGATTCGTTACTCTCTCCTCCTTCACCAATGGAGGACATGACGGCCATGGAGGCGGAACACTATTAATCTTGTACGAGTTTTCCAAGACAACAACTGACGGCGGAGAGCCATCAAACGGATCTGCACCATAAAGACCAAACTCACCATAACCTTCACAACCAGACGGCAAAGTGGAGCTATCCGTGGAATCTCCACCACCGACTAAACTATCCATCCACTCATCAGATTCAAACTCTCCACCAGCGCCACTAAAATTAGGGAAGAATCGAAATCCGGCAGAAGGGTGGTCCAAATTAGGGAAATGAAAAGAAGGGTCGGAGGAATCAGGAGGTGCGGCGACATGAAAAGGGTCAGAGAAGGAAGAGGAAGAAATCCCAAAAGAGAAGTTAGGAGAAGAAGAAGAAGAAGAAGCCATAGTTGAGGAAGGATTGATGTTATTAGTCCAAGGAAGAATAGAAAAAGGGGAAAGTGGAGAAAGATGGTGTTGCTGTTGGTCTTGCTGTTGTTTTTGGTTGATGAGTTGTTGAGCAATAGCCATTAGATTACCACTGTCTGCGCACATATACGCCATTAAATCAGAAGAAGCAGAGAGAAAAAGGTGGGATGCGACTCACATTACCAGAAGAAGAAAGATGAAGAAGAAAATGGGGAAACAAAGAGAGAGTATGGACAAAGGGAGGAAATAAATGGAGGAAACAAAAGAACAGAGTGTGGACCAGAGGTTTGAAGGAGAAGGAGAAGGAGAAGAGAAGGAGAAGGAGAAGGAGACGAAGAGAGGGAGTGTGGAAATGAGATTTGGAATGGTAGAAATAATAAAAAGGTGTGAGTGAGTGTAGAGGATTGGAGTCAAGGCCGTTGAAGGACGAAAGGGAGTGGACCCCACTTTTCCCATTTAGAACAAAATTGTAAGAGGACAGAGAGTGTGTGAGAAAGAGATTTTTGGGTACTCTTTTGGGCCCCAATTTTTGCTTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTTTCTTCCTCTAAAATCCAAAAACTACTATTTTCGAAATTACACTACCCTTTCAATTTCAAATATCATTTCACATG

Coding sequence (CDS)

ATGGACCAAACCAAACGAAATCTGAAACCCGGAAATGGGTCTATCAACAGGTTGTTCCATTCCACACCAGTGAAAAAGATCTGGTTGATTGAAACTGATTACTACCATCAATACAACGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAATTGTAAGGGAAGATCAACGCCAGGAAGATACAGTTAAGAGAGGAACGTCGTTCCATGCCAGAGAAAGAAATTCCGGCGCCGATTCGATCAGAGTGTAG

Protein sequence

MDQTKRNLKPGNGSINRLFHSTPVKKIWLIETDYYHQYNEKKKKKKKKKKKKIVREDQRQEDTVKRGTSFHARERNSGADSIRV

Homology

The following BLAST results are available for this feature:

BLAST of MELO3C032829.1 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C032829.1 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C032829.1 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C032829.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 39..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..84

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C032829	MELO3C032829	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032829.1:exon:218927	MELO3C032829.1:exon:218927	exon
MELO3C032829.1:exon:218926	MELO3C032829.1:exon:218926	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032829.1:three_prime_utr	MELO3C032829.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032829.1:cds	MELO3C032829.1:cds	CDS
MELO3C032829.1:cds	MELO3C032829.1:cds_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C032829.1	MELO3C032829.1-protein	polypeptide