MELO3C032548.jh1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview


Name	MELO3C032548.jh1.t1
Type	mRNA
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Homeobox leucine zipper protein
Location	chr07: 19412738 .. 19413382 (+)
Sequence length	526
RNA-Seq Expression	MELO3C032548.jh1.t1
Synteny	MELO3C032548.jh1.t1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGAAAAAAGGTTGCTCTTAAGAGTCGTGATGTGCTTAGTTTCGTAGCTGAAAAGGGAAAATGGATGCATGTAAACCACAAATATACGTTAAAACCTCATTGGTCTTCCACGCAAAAGCTTGTTTCACATTACTTTCTTATTACTTACCACCTATATATTTCAATTATTTTTCTGTGCCTTCTTCGCAGGAACAGATTATATATTCAACAAACTTCACAGTACCAAAATTTGAGGCTGAGGCTGTAGCTTAGCCGTAACAACATGAATAAAATCAGGTTTAGTGATTTACAAATCAAATCATTGGAGACAATATTTTATTCGACTGAATCAAAGCTGAATTCAACGCAGAAGGTCGAGCTAGCAACTGAGTTGGGACTGCAACCTCGCCAGATTGCTATATGGTTTCAGAACAGAAGAGCAAGATGGAGGAGATGCAGGACAATTTCAAAAGCCTCAGAGCTAATTATTATAATCAAGCAGTTTAAAACGTTACAGGAAGAGAACAATTCCTTGCTCTCACAAGTACCAAAACTCTTCTTCATTTTCCTTTATTCGTCCTTCTATAGCCAAGCATTTTCATTAGTTGCCATAGGCATTTGAAACGGTGGCAGAAGCTAAGCATTCTTCTTTAAGGACCTT

mRNA sequence

ATGGGTAGAAAAAAGGTTGCTCTTAAGAGTCGTGATGTGCTTAGTTTCGTAGCTGAAAAGGGAAAATGGATGCATGAACAGATTATATATTCAACAAACTTCACAGTACCAAAATTTGAGGCTGAGGCTGTAGCTTAGCCGTAACAACATGAATAAAATCAGGTTTAGTGATTTACAAATCAAATCATTGGAGACAATATTTTATTCGACTGAATCAAAGCTGAATTCAACGCAGAAGGTCGAGCTAGCAACTGAGTTGGGACTGCAACCTCGCCAGATTGCTATATGGTTTCAGAACAGAAGAGCAAGATGGAGGAGATGCAGGACAATTTCAAAAGCCTCAGAGCTAATTATTATAATCAAGCAGTTTAAAACGTTACAGGAAGAGAACAATTCCTTGCTCTCACAAGTACCAAAACTCTTCTTCATTTTCCTTTATTCGTCCTTCTATAGCCAAGCATTTTCATTAGTTGCCATAGGCATTTGAAACGGTGGCAGAAGCTAAGCATTCTTCTTTAAGGACCTT

Coding sequence (CDS)

ATGAATAAAATCAGGTTTAGTGATTTACAAATCAAATCATTGGAGACAATATTTTATTCGACTGAATCAAAGCTGAATTCAACGCAGAAGGTCGAGCTAGCAACTGAGTTGGGACTGCAACCTCGCCAGATTGCTATATGGTTTCAGAACAGAAGAGCAAGATGGAGGAGATGCAGGACAATTTCAAAAGCCTCAGAGCTAATTATTATAATCAAGCAGTTTAAAACGTTACAGGAAGAGAACAATTCCTTGCTCTCACAAGTACCAAAACTCTTCTTCATTTTCCTTTATTCGTCCTTCTATAGCCAAGCATTTTCATTAGTTGCCATAGGCATTTGA

Protein sequence

MNKIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRTISKASELIIIIKQFKTLQEENNSLLSQVPKLFFIFLYSSFYSQAFSLVAIGI

Homology

[Close]

BLAST of MELO3C032548.jh1.t1 vs. NCBI nr
Match: XP_038900057.1 (homeobox-leucine zipper protein ATHB-12-like isoform X2 [Benincasa hispida])

HSP 1 Score: 114 bits (285), Expect = 1.90e-28
Identity = 63/95 (66.32%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 1   MNKIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRT 60
           MNK R SD QI+SLETIFYST+S+L+S +KV+LATELGLQPRQIAIWFQNRRARW+    
Sbjct: 59  MNKRRLSDEQIRSLETIFYSTDSRLDSRKKVQLATELGLQPRQIAIWFQNRRARWKSKEM 118

Query: 61  ISKASELIIII----KQFKTLQEENNSLLSQVPKL 91
            +    L  I      QFKTLQEENNS+LSQ+ KL
Sbjct: 119 ENNFRSLKAIYDNLESQFKTLQEENNSMLSQLQKL 153

[Close]

BLAST of MELO3C032548.jh1.t1 vs. NCBI nr
Match: XP_023553122.1 (homeobox-leucine zipper protein ATHB-12-like [Cucurbita pepo subsp. pepo] >XP_023553124.1 homeobox-leucine zipper protein ATHB-12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 112 bits (280), Expect = 8.29e-28
Identity = 62/95 (65.26%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 1   MNKIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRT 60
           MNK RFSD QI+SLE+IFYS++SKL+S +KV+LATELGLQPRQIAIWFQNRRARW+    
Sbjct: 37  MNKRRFSDEQIRSLESIFYSSDSKLDSRKKVQLATELGLQPRQIAIWFQNRRARWKSKEM 96

Query: 61  ISKASELII----IIKQFKTLQEENNSLLSQVPKL 91
            +    L      +  QFKTLQEE NSLLSQ+ KL
Sbjct: 97  ENNFRSLRANYDNLASQFKTLQEEKNSLLSQLQKL 131

[Close]

BLAST of MELO3C032548.jh1.t1 vs. NCBI nr
Match: XP_022923069.1 (homeobox-leucine zipper protein ATHB-12-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 112 bits (280), Expect = 8.85e-28
Identity = 62/95 (65.26%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 1   MNKIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRT 60
           MNK RFSD QI+SLE+IFYS++SKL+S +KV+LATELGLQPRQIAIWFQNRRARW+    
Sbjct: 40  MNKRRFSDEQIRSLESIFYSSDSKLDSRKKVQLATELGLQPRQIAIWFQNRRARWKSKEM 99

Query: 61  ISKASELII----IIKQFKTLQEENNSLLSQVPKL 91
            +    L      +  QFKTLQEE NSLLSQ+ KL
Sbjct: 100 ENNFRSLRANYDNLASQFKTLQEEKNSLLSQLQKL 134

[Close]

BLAST of MELO3C032548.jh1.t1 vs. NCBI nr
Match: XP_022923068.1 (homeobox-leucine zipper protein ATHB-12-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 112 bits (280), Expect = 1.19e-27
Identity = 62/95 (65.26%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 1   MNKIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRT 60
           MNK RFSD QI+SLE+IFYS++SKL+S +KV+LATELGLQPRQIAIWFQNRRARW+    
Sbjct: 54  MNKRRFSDEQIRSLESIFYSSDSKLDSRKKVQLATELGLQPRQIAIWFQNRRARWKSKEM 113

Query: 61  ISKASELII----IIKQFKTLQEENNSLLSQVPKL 91
            +    L      +  QFKTLQEE NSLLSQ+ KL
Sbjct: 114 ENNFRSLRANYDNLASQFKTLQEEKNSLLSQLQKL 148

[Close]

BLAST of MELO3C032548.jh1.t1 vs. NCBI nr
Match: XP_022945963.1 (homeobox-leucine zipper protein ATHB-12-like [Cucurbita moschata])

HSP 1 Score: 110 bits (275), Expect = 2.75e-27
Identity = 60/95 (63.16%), Postives = 74/95 (77.89%), Query Frame = 0


Query: 1   MNKIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRT 60
           MNK RFSD QI+SLE+IFYS++SKL+S +KV+LA ELGLQPRQI+IWFQNRRARW+  + 
Sbjct: 36  MNKRRFSDEQIRSLESIFYSSDSKLDSRKKVQLAAELGLQPRQISIWFQNRRARWKSKQM 95

Query: 61  ISKASELII----IIKQFKTLQEENNSLLSQVPKL 91
            +    L      +  QF+TLQEENNSLLSQ+ KL
Sbjct: 96  ENDFRSLRASYDNLASQFRTLQEENNSLLSQLQKL 130

[Close]

BLAST of MELO3C032548.jh1.t1 vs. ExPASy Swiss-Prot
Match: P46897 (Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana OX=3702 GN=ATHB-7 PE=1 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 2.3e-14
Identity = 45/94 (47.87%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 2   NKIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRTI 61
           N+ RFSD QIKSLE +F S E++L   +KV+LA ELGLQPRQ+AIWFQN+RARW+  +  
Sbjct: 32  NQRRFSDEQIKSLEMMFES-ETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLE 91

Query: 62  SKASEL----IIIIKQFKTLQEENNSLLSQVPKL 92
           ++ + L      +  QF++L++E  +L+S++ +L
Sbjct: 92  TEYNILRQNYDNLASQFESLKKEKQALVSELQRL 124

[Close]

BLAST of MELO3C032548.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9M276 (Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana OX=3702 GN=ATHB-12 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.9e-14
Identity = 44/94 (46.81%), Postives = 66/94 (70.21%), Query Frame = 0


Query: 2   NKIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRTI 61
           N+ RFS+ QIKSLE IF S E++L   +KV++A ELGLQPRQ+AIWFQN+RARW+  +  
Sbjct: 30  NQKRFSEEQIKSLELIFES-ETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLE 89

Query: 62  SKASELII----IIKQFKTLQEENNSLLSQVPKL 92
            + + L      +  QF+ +++E  SL+S++ +L
Sbjct: 90  KEYNTLRANYNNLASQFEIMKKEKQSLVSELQRL 122

[Close]

BLAST of MELO3C032548.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9XH35 (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica OX=39946 GN=HOX6 PE=2 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 3.9e-14
Identity = 44/93 (47.31%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 3   KIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRTIS 62
           K RFS+ QIKSLE++F +T++KL   QK++LA ELGLQPRQ+AIWFQN+RARW+  +   
Sbjct: 31  KKRFSEEQIKSLESMF-ATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLER 90

Query: 63  KASEL----IIIIKQFKTLQEENNSLLSQVPKL 92
           + S L      ++  +++L++E  +L+ Q+ KL
Sbjct: 91  EYSALRDDYDALLCSYESLKKEKLALIKQLEKL 122

[Close]

BLAST of MELO3C032548.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q651Z5 (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX6 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.9e-14
Identity = 44/93 (47.31%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 3   KIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRTIS 62
           K RFS+ QIKSLE++F +T++KL   QK++LA ELGLQPRQ+AIWFQN+RARW+  +   
Sbjct: 31  KKRFSEEQIKSLESMF-ATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLER 90

Query: 63  KASEL----IIIIKQFKTLQEENNSLLSQVPKL 92
           + S L      ++  +++L++E  +L+ Q+ KL
Sbjct: 91  EYSALRDDYDALLCSYESLKKEKLALIKQLEKL 122

[Close]

BLAST of MELO3C032548.jh1.t1 vs. ExPASy Swiss-Prot
Match: A2X7U1 (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. indica OX=39946 GN=HOX24 PE=2 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 3.3e-13
Identity = 40/93 (43.01%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 3   KIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRT-- 62
           K RF++ Q++SLET F++  +KL   +K ELA ELGLQPRQ+AIWFQN+RARWR  +   
Sbjct: 66  KRRFTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEH 125

Query: 63  --ISKASELIIIIKQFKTLQEENNSLLSQVPKL 92
              +  ++   +  + ++L++E  +L +QV +L
Sbjct: 126 DYAALRAQYDALHARVESLRQEKLALAAQVDEL 158

[Close]

BLAST of MELO3C032548.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1E599 (homeobox-leucine zipper protein ATHB-12-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430852 PE=4 SV=1)

HSP 1 Score: 112 bits (280), Expect = 4.29e-28
Identity = 62/95 (65.26%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 1   MNKIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRT 60
           MNK RFSD QI+SLE+IFYS++SKL+S +KV+LATELGLQPRQIAIWFQNRRARW+    
Sbjct: 40  MNKRRFSDEQIRSLESIFYSSDSKLDSRKKVQLATELGLQPRQIAIWFQNRRARWKSKEM 99

Query: 61  ISKASELII----IIKQFKTLQEENNSLLSQVPKL 91
            +    L      +  QFKTLQEE NSLLSQ+ KL
Sbjct: 100 ENNFRSLRANYDNLASQFKTLQEEKNSLLSQLQKL 134

[Close]

BLAST of MELO3C032548.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1E8K2 (homeobox-leucine zipper protein ATHB-12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430852 PE=4 SV=1)

HSP 1 Score: 112 bits (280), Expect = 5.78e-28
Identity = 62/95 (65.26%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 1   MNKIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRT 60
           MNK RFSD QI+SLE+IFYS++SKL+S +KV+LATELGLQPRQIAIWFQNRRARW+    
Sbjct: 54  MNKRRFSDEQIRSLESIFYSSDSKLDSRKKVQLATELGLQPRQIAIWFQNRRARWKSKEM 113

Query: 61  ISKASELII----IIKQFKTLQEENNSLLSQVPKL 91
            +    L      +  QFKTLQEE NSLLSQ+ KL
Sbjct: 114 ENNFRSLRANYDNLASQFKTLQEEKNSLLSQLQKL 148

[Close]

BLAST of MELO3C032548.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1G2H1 (homeobox-leucine zipper protein ATHB-12-like OS=Cucurbita moschata OX=3662 GN=LOC111450049 PE=4 SV=1)

HSP 1 Score: 110 bits (275), Expect = 1.33e-27
Identity = 60/95 (63.16%), Postives = 74/95 (77.89%), Query Frame = 0


Query: 1   MNKIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRT 60
           MNK RFSD QI+SLE+IFYS++SKL+S +KV+LA ELGLQPRQI+IWFQNRRARW+  + 
Sbjct: 36  MNKRRFSDEQIRSLESIFYSSDSKLDSRKKVQLAAELGLQPRQISIWFQNRRARWKSKQM 95

Query: 61  ISKASELII----IIKQFKTLQEENNSLLSQVPKL 91
            +    L      +  QF+TLQEENNSLLSQ+ KL
Sbjct: 96  ENDFRSLRASYDNLASQFRTLQEENNSLLSQLQKL 130

[Close]

BLAST of MELO3C032548.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1CGX7 (homeobox-leucine zipper protein ATHB-7-like OS=Momordica charantia OX=3673 GN=LOC111011558 PE=4 SV=1)

HSP 1 Score: 110 bits (274), Expect = 1.45e-27
Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 0


Query: 1   MNKIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRT 60
           MNK RFSD+QI+SLE+IFYS++SKL+  +KV+LATELGLQPRQ+AIWFQNRRARW+  + 
Sbjct: 36  MNKRRFSDVQIRSLESIFYSSDSKLDPRKKVQLATELGLQPRQVAIWFQNRRARWKSKQM 95

Query: 61  ISKASELII----IIKQFKTLQEENNSLLSQVPKL 91
            +    L      +  QFK+LQEE NSLLSQ+ KL
Sbjct: 96  ENDFRSLRANYDNLASQFKSLQEERNSLLSQLQKL 130

[Close]

BLAST of MELO3C032548.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1J3H1 (homeobox-leucine zipper protein ATHB-12-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483056 PE=4 SV=1)

HSP 1 Score: 108 bits (271), Expect = 8.80e-27
Identity = 60/94 (63.83%), Postives = 71/94 (75.53%), Query Frame = 0


Query: 2   NKIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRTI 61
           NK RFSD QI+SLE+IFYS++SKL+S +KV+LATELGLQPRQIAIWFQNRR RW+     
Sbjct: 38  NKRRFSDEQIRSLESIFYSSDSKLDSRKKVQLATELGLQPRQIAIWFQNRRVRWKSKEME 97

Query: 62  SKASELII----IIKQFKTLQEENNSLLSQVPKL 91
           +    L      +  QFKTLQEE NSLLSQ+ KL
Sbjct: 98  NNFRSLRANYDNLASQFKTLQEEKNSLLSQLQKL 131

[Close]

BLAST of MELO3C032548.jh1.t1 vs. TAIR 10
Match: AT2G46680.1 (homeobox 7 )

HSP 1 Score: 79.7 bits (195), Expect = 1.6e-15
Identity = 45/94 (47.87%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 2   NKIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRTI 61
           N+ RFSD QIKSLE +F S E++L   +KV+LA ELGLQPRQ+AIWFQN+RARW+  +  
Sbjct: 32  NQRRFSDEQIKSLEMMFES-ETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLE 91

Query: 62  SKASEL----IIIIKQFKTLQEENNSLLSQVPKL 92
           ++ + L      +  QF++L++E  +L+S++ +L
Sbjct: 92  TEYNILRQNYDNLASQFESLKKEKQALVSELQRL 124

[Close]

BLAST of MELO3C032548.jh1.t1 vs. TAIR 10
Match: AT3G61890.1 (homeobox 12 )

HSP 1 Score: 79.0 bits (193), Expect = 2.8e-15
Identity = 44/94 (46.81%), Postives = 66/94 (70.21%), Query Frame = 0


Query: 2   NKIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRTI 61
           N+ RFS+ QIKSLE IF S E++L   +KV++A ELGLQPRQ+AIWFQN+RARW+  +  
Sbjct: 30  NQKRFSEEQIKSLELIFES-ETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLE 89

Query: 62  SKASELII----IIKQFKTLQEENNSLLSQVPKL 92
            + + L      +  QF+ +++E  SL+S++ +L
Sbjct: 90  KEYNTLRANYNNLASQFEIMKKEKQSLVSELQRL 122

[Close]

BLAST of MELO3C032548.jh1.t1 vs. TAIR 10
Match: AT2G46680.2 (homeobox 7 )

HSP 1 Score: 77.4 bits (189), Expect = 8.1e-15
Identity = 44/90 (48.89%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 2   NKIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRTI 61
           N+ RFSD QIKSLE +F S E++L   +KV+LA ELGLQPRQ+AIWFQN+RARW+  +  
Sbjct: 32  NQRRFSDEQIKSLEMMFES-ETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLE 91

Query: 62  SKASEL----IIIIKQFKTLQEENNSLLSQ 88
           ++ + L      +  QF++L++E  +L+S+
Sbjct: 92  TEYNILRQNYDNLASQFESLKKEKQALVSE 120

[Close]

BLAST of MELO3C032548.jh1.t1 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 70.9 bits (172), Expect = 7.6e-13
Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 0


Query: 3   KIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWRRCRTIS 62
           K R S  Q+K+LE  F   E+KL   +KV+LA ELGLQPRQ+A+WFQNRRARW + + + 
Sbjct: 63  KRRLSINQVKALEKNF-ELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARW-KTKQLE 122

Query: 63  K-----ASELIIIIKQFKTLQEENNSLLSQVPKL 92
           K      ++   +   F +L+ +N SLL ++ KL
Sbjct: 123 KDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKL 154

[Close]

BLAST of MELO3C032548.jh1.t1 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 )

HSP 1 Score: 67.8 bits (164), Expect = 6.4e-12
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 0


Query: 3   KIRFSDLQIKSLETIFYSTESKLNSTQKVELATELGLQPRQIAIWFQNRRARWR-----R 62
           K R    Q+K+LE  F   ++KL   +KV+LA ELGLQPRQ+AIWFQNRRARW+     R
Sbjct: 73  KRRLGVEQVKALEKNF-EIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLER 132

Query: 63  CRTISKASELIIIIKQFKTLQEENNSLLSQVPKL 92
              + K S    + +   +LQ +N+SLL Q+ +L
Sbjct: 133 DYGVLK-SNFDALKRNRDSLQRDNDSLLGQIKEL 164

The following BLAST results are available for this feature:

BLAST of MELO3C032548.jh1.t1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900057.1	1.90e-28	66.32	homeobox-leucine zipper protein ATHB-12-like isoform X2 [Benincasa hispida]	[more]
XP_023553122.1	8.29e-28	65.26	homeobox-leucine zipper protein ATHB-12-like [Cucurbita pepo subsp. pepo] >XP_02...	[more]
XP_022923069.1	8.85e-28	65.26	homeobox-leucine zipper protein ATHB-12-like isoform X2 [Cucurbita moschata]	[more]
XP_022923068.1	1.19e-27	65.26	homeobox-leucine zipper protein ATHB-12-like isoform X1 [Cucurbita moschata]	[more]
XP_022945963.1	2.75e-27	63.16	homeobox-leucine zipper protein ATHB-12-like [Cucurbita moschata]	[more]

BLAST of MELO3C032548.jh1.t1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46897	2.3e-14	47.87	Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana OX=3702 GN=ATHB-7...	[more]
Q9M276	3.9e-14	46.81	Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9XH35	3.9e-14	47.31	Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica OX=39946 GN=H...	[more]
Q651Z5	3.9e-14	47.31	Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
A2X7U1	3.3e-13	43.01	Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of MELO3C032548.jh1.t1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E599	4.29e-28	65.26	homeobox-leucine zipper protein ATHB-12-like isoform X2 OS=Cucurbita moschata OX...	[more]
A0A6J1E8K2	5.78e-28	65.26	homeobox-leucine zipper protein ATHB-12-like isoform X1 OS=Cucurbita moschata OX...	[more]
A0A6J1G2H1	1.33e-27	63.16	homeobox-leucine zipper protein ATHB-12-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1CGX7	1.45e-27	62.11	homeobox-leucine zipper protein ATHB-7-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1J3H1	8.80e-27	63.83	homeobox-leucine zipper protein ATHB-12-like isoform X2 OS=Cucurbita maxima OX=3...	[more]

BLAST of MELO3C032548.jh1.t1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46680.1	1.6e-15	47.87	homeobox 7	[more]
AT3G61890.1	2.8e-15	46.81	homeobox 12	[more]
AT2G46680.2	8.1e-15	48.89	homeobox 7	[more]
AT2G22430.1	7.6e-13	44.68	homeobox protein 6	[more]
AT5G65310.1	6.4e-12	45.74	homeobox protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 29..38 score: 50.87 coord: 38..54 score: 58.02
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 1..62 e-value: 2.9E-12 score: 56.7
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 4..57 e-value: 5.8E-17 score: 61.3
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 1..58 score: 16.632998
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 5..52 e-value: 4.56863E-8 score: 44.1565
None	No IPR available	GENE3D	1.10.10.60		coord: 1..64 e-value: 6.6E-18 score: 66.1
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 2..91
None	No IPR available	PANTHER	PTHR24326:SF122	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-7	coord: 2..91
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 33..56
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 3..58

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C032548.jh1	MELO3C032548.jh1	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032548.jh1.t1.exon	MELO3C032548.jh1.t1.exon	exon
MELO3C032548.jh1.t1.exon	MELO3C032548.jh1.t1.exon_2	exon

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032548.jh1.t1.start_codon	MELO3C032548.jh1.t1.start_codon	start_codon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032548.jh1.t1.cds	MELO3C032548.jh1.t1.cds	CDS

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032548.jh1.t1.stop_codon	MELO3C032548.jh1.t1.stop_codon	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C032548.jh1.t1	MELO3C032548.jh1.t1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific